CSF2RA (colony stimulating factor 2 receptor subunit alpha) - Rat Genome Database

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Gene: CSF2RA (colony stimulating factor 2 receptor subunit alpha) Sus scrofa
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Symbol: CSF2RA
Name: colony stimulating factor 2 receptor subunit alpha
RGD ID: 14131904
Description: ENCODES a protein that exhibits cytokine receptor activity (inferred); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); granulocyte-macrophage colony-stimulating factor signaling pathway (ortholog); positive regulation of leukocyte proliferation (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); pulmonary alveolar proteinosis (ortholog); Pulmonary Surfactant Metabolism Dysfunction 4 (ortholog); FOUND IN granulocyte macrophage colony-stimulating factor receptor complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: colony stimulating factor 2 receptor alpha subunit; granulocyte-macrophage colony-stimulating factor receptor subunit alpha
RGD Orthologs
Human
Mouse
Rat
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position: No map positions available.


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CSF2RA
(Sus scrofa - pig)		 No map positions available.
CSF2RA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X1,268,814 - 1,325,218 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38Y1,268,814 - 1,325,218 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblY1,268,793 - 1,325,373 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p14 EnsemblX1,268,793 - 1,325,373 (+)EnsemblGRCh38hg38GRCh38
GRCh37X1,387,707 - 1,444,111 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh37Y1,337,707 - 1,394,111 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36Y1,347,701 - 1,388,827 (+)NCBINCBI36Build 36hg18NCBI36
Build 36X1,347,701 - 1,388,827 (+)NCBINCBI36Build 36hg18NCBI36
Build 34Y1,355,172 - 1,396,299NCBI
CeleraX5,684,057 - 5,726,879 (+)NCBICelera
Cytogenetic MapX;YNCBI
CHM1_1X1,418,017 - 1,458,211 (+)NCBICHM1_1
T2T-CHM13v2.0Y1,129,416 - 1,189,240 (+)NCBIT2T-CHM13v2.0
T2T-CHM13v2.0X1,116,126 - 1,174,802 (+)NCBIT2T-CHM13v2.0
Csf2ra
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391961,205,629 - 61,221,141 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1961,212,395 - 61,216,867 (-)EnsemblGRCm39 Ensembl
GRCm381961,217,191 - 61,228,461 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1961,223,957 - 61,228,429 (-)EnsemblGRCm38mm10GRCm38
MGSCv371961,300,305 - 61,304,321 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361961,279,074 - 61,283,022 (-)NCBIMGSCv36mm8
Celera1963,421,543 - 63,425,590 (-)NCBICelera
Cytogenetic Map19D3NCBI
cM Map1956.89NCBI
Csf2ra
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814113,219 - 118,808 (-)NCBIGRCr8
mRatBN7.21498,089 - 103,261 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1489,172 - 103,128 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx14116,168 - 121,062 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0141,417,943 - 1,422,837 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.014114,615 - 119,509 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0141,462,292 - 1,467,264 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl141,462,358 - 1,467,264 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0141,465,139 - 1,469,667 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera14661,818 - 666,688 (+)NCBICelera
Cytogenetic Map14p22NCBI
CSF2RA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X832,170 - 855,548 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX832,046 - 853,876 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX772,774 - 796,202 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X742,740 - 766,122 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X734,899 - 758,240 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X751,242 - 774,663 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X748,192 - 771,608 (+)NCBIUU_Cfam_GSD_1.0
LOC101965277
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404953534,206 - 541,365 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366443,835,462 - 3,842,471 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC103247514
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_023666141112,013 - 168,815 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Csf2ra
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624834616,180 - 628,794 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Protein Domains
Fibronectin type-III   IL-3 receptor alpha chain N-terminal   Type I cytokine receptor cytokine-binding


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000030088 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00030038834 UniProtKB/TrEMBL
  ENSSSCG00035077935 UniProtKB/TrEMBL
  ENSSSCG00040039515 UniProtKB/TrEMBL
  ENSSSCG00045034810 UniProtKB/TrEMBL
  ENSSSCG00055001232 UniProtKB/TrEMBL
  ENSSSCG00060034908 UniProtKB/TrEMBL
  ENSSSCG00065074307 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000023613 ENTREZGENE
  ENSSSCT00000023613.3 UniProtKB/TrEMBL
  ENSSSCT00000060101 ENTREZGENE
  ENSSSCT00000060101.2 UniProtKB/TrEMBL
  ENSSSCT00000073634.2 UniProtKB/TrEMBL
  ENSSSCT00030054047.1 UniProtKB/TrEMBL
  ENSSSCT00030054077.1 UniProtKB/TrEMBL
  ENSSSCT00030054115.1 UniProtKB/TrEMBL
  ENSSSCT00030054146.1 UniProtKB/TrEMBL
  ENSSSCT00035106233.1 UniProtKB/TrEMBL
  ENSSSCT00035106262.1 UniProtKB/TrEMBL
  ENSSSCT00035106344.1 UniProtKB/TrEMBL
  ENSSSCT00040052842.1 UniProtKB/TrEMBL
  ENSSSCT00040053000.1 UniProtKB/TrEMBL
  ENSSSCT00040053122.1 UniProtKB/TrEMBL
  ENSSSCT00040053208.1 UniProtKB/TrEMBL
  ENSSSCT00045059670.1 UniProtKB/TrEMBL
  ENSSSCT00045059747.1 UniProtKB/TrEMBL
  ENSSSCT00045059846.1 UniProtKB/TrEMBL
  ENSSSCT00045059943.1 UniProtKB/TrEMBL
  ENSSSCT00055002196.1 UniProtKB/TrEMBL
  ENSSSCT00055002202.1 UniProtKB/TrEMBL
  ENSSSCT00055002222.1 UniProtKB/TrEMBL
  ENSSSCT00055002236.1 UniProtKB/TrEMBL
  ENSSSCT00055002256.1 UniProtKB/TrEMBL
  ENSSSCT00060047316.1 UniProtKB/TrEMBL
  ENSSSCT00065102352.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  IL3Ra_N UniProtKB/TrEMBL
  Short_hematopoietin_rcpt_2_CS UniProtKB/TrEMBL
  Type-I_Cytokine_Rcpt UniProtKB/TrEMBL
  TypeI_recpt_CBD UniProtKB/TrEMBL
NCBI Gene CSF2RA ENTREZGENE
PANTHER CYTOKINE RECEPTOR UniProtKB/TrEMBL
  CYTOKINE RECEPTOR UniProtKB/TrEMBL
  CYTOKINE RECEPTOR-LIKE FACTOR 2-RELATED UniProtKB/TrEMBL
  ERYTHROPOIETIN RECEPTOR UniProtKB/TrEMBL
  GRANULOCYTE-MACROPHAGE COLONY-STIMULATING FACTOR RECEPTOR SUBUNIT ALPHA UniProtKB/TrEMBL
Pfam IL3Ra_N UniProtKB/TrEMBL
  IL6Ra-bind UniProtKB/TrEMBL
PROSITE FN3 UniProtKB/TrEMBL
  HEMATOPO_REC_S_F2 UniProtKB/TrEMBL
Superfamily-SCOP SSF49265 UniProtKB/TrEMBL
UniProt A0A287BFJ1 ENTREZGENE, UniProtKB/TrEMBL
  A0A480VJ88 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2R1R0_PIG UniProtKB/TrEMBL
  A0A8D0WQI1_PIG UniProtKB/TrEMBL
  A0A8D0WQM6_PIG UniProtKB/TrEMBL
  A0A8D0WR70_PIG UniProtKB/TrEMBL
  A0A8D1B9N9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1BIG2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1BK76_PIG UniProtKB/TrEMBL
  A0A8D1C805_PIG UniProtKB/TrEMBL
  A0A8D1EG58_PIG UniProtKB/TrEMBL
  A0A8D1EGP1_PIG UniProtKB/TrEMBL
  A0A8D1EGX5_PIG UniProtKB/TrEMBL
  A0A8D1EKH9_PIG UniProtKB/TrEMBL
  A0A8D1IYE3_PIG UniProtKB/TrEMBL
  A0A8D1IZQ8_PIG UniProtKB/TrEMBL
  A0A8D1J346_PIG UniProtKB/TrEMBL
  A0A8D1P573_PIG UniProtKB/TrEMBL
  A0A8D1PCL0_PIG UniProtKB/TrEMBL
  A0A8D1PCN7_PIG UniProtKB/TrEMBL
  A0A8D1PCY0_PIG UniProtKB/TrEMBL
  A0A8D1TT37_PIG UniProtKB/TrEMBL
  A0A8D1V9K6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D2A518 ENTREZGENE, UniProtKB/TrEMBL
  I3LVK0 ENTREZGENE, UniProtKB/TrEMBL
  K9J4V7_PIG UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-27 CSF2RA  colony stimulating factor 2 receptor subunit alpha  CSF2RA  colony stimulating factor 2 receptor alpha subunit  Symbol and/or name change 5135510 APPROVED