IQGAP2 (IQ motif containing GTPase activating protein 2) - Rat Genome Database

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Gene: IQGAP2 (IQ motif containing GTPase activating protein 2) Sus scrofa
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Symbol: IQGAP2
Name: IQ motif containing GTPase activating protein 2
RGD ID: 14110570
Description: ENCODES a protein that exhibits actin filament binding (inferred); Arp2/3 complex binding (inferred); calmodulin binding (inferred); INVOLVED IN Arp2/3 complex-mediated actin nucleation (inferred); regulation of actin cytoskeleton organization (inferred); thrombin-activated receptor signaling pathway (inferred); ASSOCIATED WITH Brain Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN microtubule (ortholog); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ras GTPase-activating-like protein IQGAP2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl285,294,530 - 85,633,642 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1285,294,423 - 85,633,645 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2286,916,946 - 87,086,957 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IQGAP2PigNeurodevelopmental Disorders  ISOIQGAP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IQGAP2PigBrain Neoplasms  ISOIQGAP2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:27935819
IQGAP2Pighepatocellular carcinoma  ISOIQGAP2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:20977743
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IQGAP2Pighepatocellular carcinoma  ISOIqgap2 (Mus musculus)9068941OMIM:114550MouseDO 


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IQGAP2Pigdeoxynivalenol decreases expressionEXP 6480464deoxynivalenol results in decreased expression of IQGAP2 mRNACTDPMID:35307453


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IQGAP2PigArp2/3 complex-mediated actin nucleation involved_inIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2Pigmitotic actomyosin contractile ring assembly actin filament organization involved_inIBAPANTHER:PTN000365541 and SGD:S000006163150520179 GO_CentralGO_REF:0000033
IQGAP2Pigregulation of actin cytoskeleton organization involved_inIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2Pigthrombin-activated receptor signaling pathway involved_inIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IQGAP2Pigcell cortex is_active_inIBACGD:CAL0000175167 more ...150520179 GO_CentralGO_REF:0000033
IQGAP2Pigcell surface located_inIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2Pigcytoplasm located_inIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2Pigfilopodium located_inIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2Piglamellipodium located_inIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2Pigmicrotubule located_inISOIQGAP2 (Homo sapiens)9068941 PMID:21525035UniProtPMID:21525035
IQGAP2Pigmicrovillus located_inIEAUniProtKB:Q3UQ44 and ensembl:ENSMUSP00000067685150520179 EnsemblGO_REF:0000107
IQGAP2Pigplasma membrane bounded cell projection located_inIEAARBA:ARBA00028036150520179 UniProtGO_REF:0000117

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IQGAP2Pigactin filament binding enablesIBAPANTHER:PTN000365541 more ...150520179 GO_CentralGO_REF:0000033
IQGAP2Pigactin filament binding enablesIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2PigArp2/3 complex binding enablesIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2Pigcalmodulin binding enablesIBAPANTHER:PTN000365541 more ...150520179 GO_CentralGO_REF:0000033
IQGAP2Pigcalmodulin binding enablesIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2PigGTPase activator activity enablesIBAPANTHER:PTN000365540 more ...150520179 GO_CentralGO_REF:0000033
IQGAP2Pigphosphatidylinositol-3,4,5-trisphosphate binding enablesIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107
IQGAP2Pigsmall GTPase binding enablesIEAUniProtKB:Q13576 and ensembl:ENSP00000274364150520179 EnsemblGO_REF:0000107

PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  



IQGAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl285,294,530 - 85,633,642 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1285,294,423 - 85,633,645 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2286,916,946 - 87,086,957 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IQGAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38576,403,285 - 76,708,132 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl576,403,285 - 76,708,132 (+)EnsemblGRCh38hg38GRCh38
GRCh37575,699,110 - 76,003,957 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36575,734,905 - 76,039,713 (+)NCBINCBI36Build 36hg18NCBI36
Build 34575,734,904 - 76,039,711NCBI
Celera571,592,826 - 71,897,903 (+)NCBICelera
Cytogenetic Map5q13.3NCBI
HuRef570,906,692 - 71,211,466 (+)NCBIHuRef
CHM1_1575,131,847 - 75,437,149 (+)NCBICHM1_1
T2T-CHM13v2.0576,885,042 - 77,189,993 (+)NCBIT2T-CHM13v2.0
Iqgap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391395,763,685 - 96,028,788 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1395,763,682 - 96,028,991 (-)EnsemblGRCm39 Ensembl
GRCm381395,627,177 - 95,892,280 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1395,627,174 - 95,892,483 (-)EnsemblGRCm38mm10GRCm38
MGSCv371396,397,132 - 96,661,877 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361396,397,132 - 96,661,877 (-)NCBIMGSCv36mm8
Celera1399,243,963 - 99,510,431 (-)NCBICelera
Cytogenetic Map13D1NCBI
cM Map1350.26NCBI
Iqgap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8228,629,558 - 28,904,649 (-)NCBIGRCr8
mRatBN7.2226,894,836 - 27,170,270 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl226,894,825 - 27,170,279 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0226,161,628 - 26,439,067 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl226,167,199 - 26,438,790 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0245,295,534 - 45,569,560 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4226,039,689 - 26,147,538 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera222,958,327 - 23,102,329 (-)NCBICelera
Cytogenetic Map2q12NCBI
Iqgap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542524,167,104 - 24,385,146 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542524,167,985 - 24,384,912 (-)NCBIChiLan1.0ChiLan1.0
IQGAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2438,597,137 - 38,902,374 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1536,750,767 - 37,056,000 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0538,593,574 - 38,900,327 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1539,137,539 - 39,516,894 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl539,138,359 - 39,516,596 (-)Ensemblpanpan1.1panPan2
IQGAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1329,894,192 - 30,134,594 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl329,894,870 - 30,174,259 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha331,132,907 - 31,420,147 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0329,818,056 - 30,105,892 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl329,818,467 - 30,106,093 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1329,749,579 - 30,036,702 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0329,730,444 - 30,016,347 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0330,099,810 - 30,387,253 (-)NCBIUU_Cfam_GSD_1.0
Iqgap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213190,317,091 - 190,603,571 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936549255,303 - 541,917 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936549256,097 - 541,860 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IQGAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1470,672,171 - 70,979,766 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl470,672,553 - 70,979,763 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604919,502,207 - 19,811,126 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Iqgap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624869889,091 - 1,171,983 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624869888,868 - 1,172,747 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in IQGAP2
12905 total Variants



alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3



Ensembl Acc Id: ENSSSCT00000015388   ⟹   ENSSSCP00000014979
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl285,294,530 - 85,633,640 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000015389   ⟹   ENSSSCP00000014980
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl285,294,530 - 85,626,032 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000031424   ⟹   ENSSSCP00000028043
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl285,380,901 - 85,624,747 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000098109   ⟹   ENSSSCP00000081090
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl285,523,156 - 85,633,642 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000102076   ⟹   ENSSSCP00000074833
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl285,523,077 - 85,633,642 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000105979   ⟹   ENSSSCP00000080446
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl285,294,530 - 85,633,640 (+)Ensembl
RefSeq Acc Id: XM_021084462   ⟹   XP_020940121
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1285,294,423 - 85,633,645 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020940121   ⟸   XM_021084462
- UniProtKB: A0A8D1CT97 (UniProtKB/TrEMBL),   A0A8W4FQ33 (UniProtKB/TrEMBL),   K9J6M1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000014979   ⟸   ENSSSCT00000015388
Ensembl Acc Id: ENSSSCP00000014980   ⟸   ENSSSCT00000015389
Ensembl Acc Id: ENSSSCP00000028043   ⟸   ENSSSCT00000031424
Ensembl Acc Id: ENSSSCP00000081090   ⟸   ENSSSCT00000098109
Calponin-homology (CH)   Ras-GAP   WW



1 to 40 of 86 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSSCG00000014088 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00030050463 UniProtKB/TrEMBL
  ENSSSCG00035036426 UniProtKB/TrEMBL
  ENSSSCG00040063703 UniProtKB/TrEMBL
  ENSSSCG00045000703 UniProtKB/TrEMBL
  ENSSSCG00055004674 UniProtKB/TrEMBL
  ENSSSCG00065077652 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000015388 ENTREZGENE
  ENSSSCT00000015388.5 UniProtKB/TrEMBL
  ENSSSCT00000015389.5 UniProtKB/TrEMBL
  ENSSSCT00000031424.4 UniProtKB/TrEMBL
  ENSSSCT00000098109.1 UniProtKB/TrEMBL
  ENSSSCT00000102076.1 UniProtKB/TrEMBL
  ENSSSCT00000105979.1 UniProtKB/TrEMBL
  ENSSSCT00030070445.1 UniProtKB/TrEMBL
  ENSSSCT00030070503.1 UniProtKB/TrEMBL
  ENSSSCT00030070544.1 UniProtKB/TrEMBL
  ENSSSCT00030070569.1 UniProtKB/TrEMBL
  ENSSSCT00030070599.1 UniProtKB/TrEMBL
  ENSSSCT00035048299.1 UniProtKB/TrEMBL
  ENSSSCT00035048319.1 UniProtKB/TrEMBL
  ENSSSCT00035048331.1 UniProtKB/TrEMBL
  ENSSSCT00035048348.1 UniProtKB/TrEMBL
  ENSSSCT00040087057.1 UniProtKB/TrEMBL
  ENSSSCT00040087411.1 UniProtKB/TrEMBL
  ENSSSCT00045001043.1 UniProtKB/TrEMBL
  ENSSSCT00045001070.1 UniProtKB/TrEMBL
  ENSSSCT00045001094.1 UniProtKB/TrEMBL
  ENSSSCT00055009226.1 UniProtKB/TrEMBL
  ENSSSCT00055009234.1 UniProtKB/TrEMBL
  ENSSSCT00055009242.1 UniProtKB/TrEMBL
  ENSSSCT00065107492.1 UniProtKB/TrEMBL
  ENSSSCT00065107561.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
  1.20.5.190 UniProtKB/TrEMBL
  GTPase Activation - p120gap, domain 1 UniProtKB/TrEMBL
InterPro CH-domain UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/TrEMBL
  IQ_motif_EF-hand-BS UniProtKB/TrEMBL
  RasGAP_C UniProtKB/TrEMBL
1 to 40 of 86 rows