DST (dystonin) - Rat Genome Database

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Pathways
Gene: DST (dystonin) Sus scrofa
Analyze
Symbol: DST
Name: dystonin
RGD ID: 14052234
Description: ENCODES a protein that exhibits integrin binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell motility (ortholog); cytoplasmic microtubule organization (ortholog); ASSOCIATED WITH anodontia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); cell leading edge (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl728,812,252 - 29,300,152 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2733,273,626 - 33,751,908 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DST
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl728,812,252 - 29,300,152 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2733,273,626 - 33,751,908 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DST
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38656,457,996 - 56,954,830 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl656,457,981 - 56,955,274 (-)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh37656,322,794 - 56,819,628 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36656,430,744 - 56,816,422 (-)NCBIBuild 36Build 36hg18NCBI36
Celera657,984,956 - 58,169,868 (-)NCBICelera
Cytogenetic Map6p12.1NCBI
HuRef656,158,712 - 56,652,953 (-)NCBIHuRef
CHM1_1656,325,822 - 56,819,767 (-)NCBICHM1_1
T2T-CHM13v2.0656,299,279 - 56,793,877 (-)NCBIT2T-CHM13v2.0
Dst
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39133,946,969 - 34,347,743 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl133,946,918 - 34,347,742 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38133,907,888 - 34,308,662 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl133,908,225 - 34,308,661 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv37134,068,670 - 34,365,497 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36133,956,371 - 34,253,198 (+)NCBIMGSCv36mm8
Celera133,786,289 - 34,078,455 (+)NCBICelera
Cytogenetic Map1BNCBI
cM Map112.91NCBI
Dst
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8943,631,716 - 44,025,535 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl943,631,517 - 44,025,533 (+)EnsemblGRCr8
mRatBN7.2936,135,657 - 36,529,617 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl936,135,284 - 36,529,615 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx944,733,010 - 45,026,540 (+)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0949,864,187 - 50,157,722 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0948,146,091 - 48,439,616 (+)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd947,512,121 - 47,805,627 (+)NCBI
Lyon_Normotensive943,287,526 - 43,581,039 (+)NCBI
Lyon_Hypertensive943,422,850 - 43,716,367 (+)NCBI
F344_StmMcwi945,348,858 - 45,642,372 (+)NCBI
Rnor_6.0937,902,336 - 38,296,961 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl937,902,303 - 38,196,273 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.0937,586,701 - 37,979,658 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4932,757,554 - 33,051,275 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera933,927,773 - 34,321,367 (+)NCBICelera
RGSC_v3.1932,758,967 - 33,051,638 (+)NCBI
Cytogenetic Map9q21NCBI
Dst
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555023,267,527 - 3,610,823 (+)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_0049555023,175,918 - 3,610,823 (+)NCBIChiLan1.0ChiLan1.0
DST
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2570,931,526 - 71,425,728 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1666,808,384 - 67,306,877 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0656,014,832 - 56,513,346 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1657,646,402 - 58,144,563 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl657,646,402 - 58,039,636 (-)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
DST
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11223,715,637 - 24,195,220 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1223,716,466 - 24,195,416 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1223,605,476 - 24,084,492 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01224,213,304 - 24,693,512 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1224,213,299 - 24,576,848 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11223,705,703 - 24,191,186 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01223,812,683 - 24,292,223 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01223,943,092 - 24,423,680 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dst
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap1895,839,227 - 96,266,868 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_02440494659,187,310 - 59,615,541 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364764,344,716 - 4,771,878 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364764,344,673 - 4,772,892 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DST
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap11759,420,249 - 59,906,849 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366605821,021,492 - 21,263,389 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.11714,652,044 - 15,133,172 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1714,652,233 - 15,133,862 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Dst
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475318,321,591 - 18,778,090 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_00462475318,321,591 - 18,674,329 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Dst
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v14110,161,980 - 110,558,831 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1

Variants

.
Variants in DST
19624 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003128338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005665867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005665870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005665875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005665878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013977745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013977750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013977755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013977756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013977757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013977759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_084967822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK238122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK346450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK397630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT737409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT998546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU329681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU468852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU571137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01128539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JBREVY020000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSSCT00000001671   ⟹   ENSSSCP00000001627
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl728,920,109 - 29,300,140 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000041384   ⟹   ENSSSCP00000037255
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl728,812,252 - 29,300,138 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000044218   ⟹   ENSSSCP00000039415
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl728,812,451 - 29,300,138 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000051268   ⟹   ENSSSCP00000046517
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl728,812,252 - 29,300,152 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000053605   ⟹   ENSSSCP00000053626
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl728,920,473 - 29,300,138 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000055387   ⟹   ENSSSCP00000033447
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl728,812,252 - 29,300,138 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000055959   ⟹   ENSSSCP00000043424
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl728,812,252 - 29,300,140 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000057442   ⟹   ENSSSCP00000039754
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl728,913,206 - 29,300,152 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000061305   ⟹   ENSSSCP00000038187
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl729,067,429 - 29,300,138 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000061452   ⟹   ENSSSCP00000052999
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl729,118,423 - 29,300,152 (+)Ensembl
RefSeq Acc Id: XM_003128338   ⟹   XP_003128386
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1729,118,579 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005665867   ⟹   XP_005665924
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,920,672 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005665870   ⟹   XP_005665927
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,451 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005665875   ⟹   XP_005665932
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,920,672 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005665878   ⟹   XP_005665935
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1729,118,485 - 29,145,518 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013977745   ⟹   XP_013833199
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,451 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013977750   ⟹   XP_013833204
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,424 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013977755   ⟹   XP_013833209
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,911,967 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013977756   ⟹   XP_013833210
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,920,114 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013977757   ⟹   XP_013833211
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1729,066,484 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013977759   ⟹   XP_013833213
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1729,117,487 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098565   ⟹   XP_020954224
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098566   ⟹   XP_020954225
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098567   ⟹   XP_020954226
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098568   ⟹   XP_020954227
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098569   ⟹   XP_020954228
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098570   ⟹   XP_020954229
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,424 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098571   ⟹   XP_020954230
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,299,900 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098572   ⟹   XP_020954231
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098573   ⟹   XP_020954232
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098575   ⟹   XP_020954234
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098576   ⟹   XP_020954235
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098577   ⟹   XP_020954236
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,911,967 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098578   ⟹   XP_020954237
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098579   ⟹   XP_020954238
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,423 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098580   ⟹   XP_020954239
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,920,175 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098581   ⟹   XP_020954240
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1729,012,446 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098582   ⟹   XP_020954241
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,983,242 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098583   ⟹   XP_020954242
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,983,242 - 29,299,171 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098584   ⟹   XP_020954243
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,428 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098585   ⟹   XP_020954244
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,812,428 - 29,300,149 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021098587   ⟹   XP_020954246
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1728,920,672 - 29,299,171 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003128386 (Get FASTA)   NCBI Sequence Viewer  
  XP_005665924 (Get FASTA)   NCBI Sequence Viewer  
  XP_005665927 (Get FASTA)   NCBI Sequence Viewer  
  XP_005665932 (Get FASTA)   NCBI Sequence Viewer  
  XP_013833199 (Get FASTA)   NCBI Sequence Viewer  
  XP_013833209 (Get FASTA)   NCBI Sequence Viewer  
  XP_013833210 (Get FASTA)   NCBI Sequence Viewer  
  XP_013833211 (Get FASTA)   NCBI Sequence Viewer  
  XP_020954228 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823908 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823909 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823910 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823911 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823912 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823913 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823914 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823915 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823916 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823917 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823918 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823919 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823920 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823921 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823922 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823923 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823924 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823925 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823926 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823927 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823928 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823929 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823930 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823931 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823932 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823933 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823934 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823935 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823936 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823937 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823938 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823939 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823940 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823941 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823942 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823943 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823945 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823946 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823947 (Get FASTA)   NCBI Sequence Viewer  
  XP_084823948 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000033447.1
  ENSSSCP00000037255.1
  ENSSSCP00000038187.2
  ENSSSCP00000039415.2
  ENSSSCP00000039754.2
  ENSSSCP00000043424.2
  ENSSSCP00000046517.1
  ENSSSCP00000052999.2
  ENSSSCP00000053626.3
RefSeq Acc Id: XP_020954224   ⟸   XM_021098565
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020954231   ⟸   XM_021098572
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_020954232   ⟸   XM_021098573
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_020954226   ⟸   XM_021098567
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_020954234   ⟸   XM_021098575
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_020954237   ⟸   XM_021098578
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_020954235   ⟸   XM_021098576
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_020954238   ⟸   XM_021098579
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_020954230   ⟸   XM_021098571
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_020954225   ⟸   XM_021098566
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_020954227   ⟸   XM_021098568
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_020954228   ⟸   XM_021098569
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_020954229   ⟸   XM_021098570
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_013833204   ⟸   XM_013977750
- Peptide Label: isoform X32
- Sequence:
RefSeq Acc Id: XP_020954243   ⟸   XM_021098584
- Peptide Label: isoform X25
- Sequence:
RefSeq Acc Id: XP_020954244   ⟸   XM_021098585
- Peptide Label: isoform X26
- Sequence:
RefSeq Acc Id: XP_013833199   ⟸   XM_013977745
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_005665927   ⟸   XM_005665870
- Peptide Label: isoform X27
- Sequence:
RefSeq Acc Id: XP_020954236   ⟸   XM_021098577
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_013833209   ⟸   XM_013977755
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_013833210   ⟸   XM_013977756
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_020954239   ⟸   XM_021098580
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_005665924   ⟸   XM_005665867
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_005665932   ⟸   XM_005665875
- Peptide Label: isoform X28
- Sequence:
RefSeq Acc Id: XP_020954246   ⟸   XM_021098587
- Peptide Label: isoform X29
- Sequence:
RefSeq Acc Id: XP_020954241   ⟸   XM_021098582
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_020954242   ⟸   XM_021098583
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_020954240   ⟸   XM_021098581
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_013833211   ⟸   XM_013977757
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_013833213   ⟸   XM_013977759
- Peptide Label: isoform X24
- Sequence:
RefSeq Acc Id: XP_005665935   ⟸   XM_005665878
- Peptide Label: isoform X31
- Sequence:
RefSeq Acc Id: XP_003128386   ⟸   XM_003128338
- Peptide Label: isoform X30
- Sequence:
Ensembl Acc Id: ENSSSCP00000001627   ⟸   ENSSSCT00000001671
Ensembl Acc Id: ENSSSCP00000039415   ⟸   ENSSSCT00000044218
Ensembl Acc Id: ENSSSCP00000043424   ⟸   ENSSSCT00000055959
Ensembl Acc Id: ENSSSCP00000037255   ⟸   ENSSSCT00000041384
Ensembl Acc Id: ENSSSCP00000046517   ⟸   ENSSSCT00000051268
Ensembl Acc Id: ENSSSCP00000038187   ⟸   ENSSSCT00000061305
Ensembl Acc Id: ENSSSCP00000033447   ⟸   ENSSSCT00000055387
Ensembl Acc Id: ENSSSCP00000052999   ⟸   ENSSSCT00000061452
Ensembl Acc Id: ENSSSCP00000053626   ⟸   ENSSSCT00000053605
Ensembl Acc Id: ENSSSCP00000039754   ⟸   ENSSSCT00000057442
Protein Domains
Calponin-homology (CH)   EF-hand   GAR   SH3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000001499 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000041384.3 UniProtKB/TrEMBL
  ENSSSCT00000044218.3 UniProtKB/TrEMBL
  ENSSSCT00000051268.3 UniProtKB/TrEMBL
  ENSSSCT00000053605.3 UniProtKB/TrEMBL
  ENSSSCT00000055387.3 UniProtKB/TrEMBL
  ENSSSCT00000055959.3 UniProtKB/TrEMBL
  ENSSSCT00000057442.3 UniProtKB/TrEMBL
  ENSSSCT00000061305.3 UniProtKB/TrEMBL
  ENSSSCT00000061452.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
  1.20.58.1060 UniProtKB/TrEMBL
  1.20.58.60 UniProtKB/TrEMBL
  3.30.920.20 UniProtKB/TrEMBL
  3.90.1290.10 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
InterPro Actinin_actin-bd_CS UniProtKB/TrEMBL
  CH-domain UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/TrEMBL
  Desmoplakin_SH3 UniProtKB/TrEMBL
  Desmoplakin_Spectrin_like UniProtKB/TrEMBL
  EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  GAR_dom UniProtKB/TrEMBL
  GAR_dom_sf UniProtKB/TrEMBL
  PCN-like_spectrin-like_rpt UniProtKB/TrEMBL
  Plakin UniProtKB/TrEMBL
  Plakin_repeat_sf UniProtKB/TrEMBL
  Plectin_repeat UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
  Spectrin/alpha-actinin UniProtKB/TrEMBL
  Spectrin_repeat UniProtKB/TrEMBL
NCBI Gene DST ENTREZGENE
PANTHER DYSTONIN UniProtKB/TrEMBL
  PTHR23169 UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/TrEMBL
  GAS2 UniProtKB/TrEMBL
  PF00307 UniProtKB/TrEMBL
  Plectin UniProtKB/TrEMBL
  SH3_10 UniProtKB/TrEMBL
  Spectrin UniProtKB/TrEMBL
  Spectrin_3 UniProtKB/TrEMBL
  Spectrin_4 UniProtKB/TrEMBL
  Spectrin_like UniProtKB/TrEMBL
  SR_desmoplakin_3 UniProtKB/TrEMBL
  SR_plectin_7 UniProtKB/TrEMBL
PROSITE ACTININ_1 UniProtKB/TrEMBL
  ACTININ_2 UniProtKB/TrEMBL
  EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
  GAR UniProtKB/TrEMBL
  PS50021 UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
SMART DELLA UniProtKB/TrEMBL
  EFh UniProtKB/TrEMBL
  GAS2 UniProtKB/TrEMBL
  PLEC UniProtKB/TrEMBL
  SM00033 UniProtKB/TrEMBL
  SPEC UniProtKB/TrEMBL
Superfamily-SCOP Spectrin repeat UniProtKB/TrEMBL
  SSF143575 UniProtKB/TrEMBL
  SSF47473 UniProtKB/TrEMBL
  SSF47576 UniProtKB/TrEMBL
  SSF75399 UniProtKB/TrEMBL
UniProt A0A286ZPP2_PIG UniProtKB/TrEMBL
  A0A287A0I5_PIG UniProtKB/TrEMBL
  A0A287A2M3_PIG UniProtKB/TrEMBL
  A0A287A6B6_PIG UniProtKB/TrEMBL
  A0A287A7G6_PIG UniProtKB/TrEMBL
  A0A287AHQ7_PIG UniProtKB/TrEMBL
  A0A287ARN2_PIG UniProtKB/TrEMBL
  A0A287B9J3_PIG UniProtKB/TrEMBL
  A0A287BAP9_PIG UniProtKB/TrEMBL
UniProt Secondary F1RZU8 UniProtKB/TrEMBL