ACTR1A (actin related protein 1A) - Rat Genome Database

ACTR1A (actin related protein 1A) - Rat Genome Database

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Gene: ACTR1A (actin related protein 1A) Sus scrofa

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Symbol:

ACTR1A

Name:

actin related protein 1A

RGD ID:

13887793

Description:

ENCODES a protein that exhibits ATP binding (inferred); nucleotide binding (inferred); INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH colon cancer (ortholog); desmoplastic/nodular medulloblastoma (ortholog); Down syndrome (ortholog); FOUND IN centriole (ortholog); COPI-coated vesicle (ortholog); manchette (ortholog)

Type:

protein-coding

RefSeq Status:

Previously known as:

alpha-centractin; ARP1 actin related protein 1 homolog A; ARP1 actin-related protein 1 homolog A, centractin alpha

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	113,480,196 - 113,498,740 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	113,480,196 - 113,498,794 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	123,335,570 - 123,354,172 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTR1A	Pig	colon cancer		ISO	RGD:1315973	9068941		RGD	PMID:26422100\|REF_RGD_ID:13831341
ACTR1A	Pig	Down syndrome		ISO	RGD:1315973	9068941	protein:decreased expression:cortex	RGD	PMID:11829462\|REF_RGD_ID:13831340

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTR1A	Pig	desmoplastic/nodular medulloblastoma		ISO	RGD:1315973	8554872	ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastoma	ClinVar	PMID:12068298

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTR1A	Pig	spermatogenesis		ISO	RGD:1307025	9068941		RGD	PMID:10671377\|REF_RGD_ID:11541119

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTR1A	Pig	cell cortex	located_in	IEA	UniProtKB:P61163\|ensembl:ENSP00000358921	150520179		Ensembl	GO_REF:0000107
ACTR1A	Pig	cell cortex	located_in	IEA	UniProtKB-SubCell:SL-0138	150520179		UniProt	GO_REF:0000044
ACTR1A	Pig	centriole		ISO	RGD:1307025	9068941		RGD	PMID:10671377\|REF_RGD_ID:11541119
ACTR1A	Pig	centrosome	located_in	IEA	UniProtKB-SubCell:SL-0048	150520179		UniProt	GO_REF:0000044
ACTR1A	Pig	centrosome	located_in	IEA	UniProtKB:P61163\|ensembl:ENSP00000358921	150520179		Ensembl	GO_REF:0000107
ACTR1A	Pig	COPI-coated vesicle		ISO	RGD:1307025	9068941		RGD	PMID:10196146\|REF_RGD_ID:11541123
ACTR1A	Pig	cytoplasm	located_in	IEA	UniProtKB:P61163\|ensembl:ENSP00000358921	150520179		Ensembl	GO_REF:0000107
ACTR1A	Pig	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
ACTR1A	Pig	cytoskeleton	located_in	IEA	UniProtKB-KW:KW-0206	150520179		UniProt	GO_REF:0000043
ACTR1A	Pig	cytoskeleton	located_in	IEA	UniProtKB-SubCell:SL-0090	150520179		UniProt	GO_REF:0000044
ACTR1A	Pig	dynactin complex	part_of	IBA	PANTHER:PTN000233666\|PomBase:SPBC1347.12\|SGD:S000001171\|WB:WBGene00013168	150520179		GO_Central	GO_REF:0000033
ACTR1A	Pig	manchette		ISO	RGD:1307025	9068941		RGD	PMID:10671377\|REF_RGD_ID:11541119

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTR1A	Pig	ATP binding	enables	IEA	UniProtKB-KW:KW-0067	150520179		UniProt	GO_REF:0000043
ACTR1A	Pig	nucleotide binding	enables	IEA	UniProtKB-KW:KW-0547	150520179		UniProt	GO_REF:0000043
ACTR1A	Pig	protein binding	enables	ISO	UniProtKB:Q9P287-2	9068941	PMID:28394342	UniProt	PMID:28394342

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ACTR1A	Pig	mitochondria transport pathway		ISO	RGD:1315973	9068941		RGD	PMID:15473859\|REF_RGD_ID:10402155

PMID:14681463

ACTR1A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	113,480,196 - 113,498,740 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	113,480,196 - 113,498,794 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	123,335,570 - 123,354,172 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ACTR1A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	102,479,229 - 102,502,712 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	102,461,881 - 102,502,712 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	104,238,986 - 104,262,469 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	104,228,976 - 104,252,452 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	104,228,976 - 104,252,452	NCBI
Celera	10	97,979,888 - 98,003,421 (-)	NCBI		Celera
Cytogenetic Map	10	q24.32	NCBI
HuRef	10	97,872,832 - 97,896,289 (-)	NCBI		HuRef
CHM1_1	10	104,522,437 - 104,545,972 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	103,364,208 - 103,387,699 (-)	NCBI		T2T-CHM13v2.0

Actr1a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	46,365,252 - 46,384,180 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	46,365,250 - 46,384,187 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	46,376,813 - 46,395,741 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	46,376,811 - 46,395,748 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	46,451,304 - 46,470,225 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	46,430,125 - 46,449,046 (-)	NCBI		MGSCv36	mm8
Celera	19	47,139,989 - 47,159,305 (-)	NCBI		Celera
Cytogenetic Map	19	C3	NCBI
cM Map	19	38.84	NCBI

Actr1a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	255,179,241 - 255,199,009 (-)	NCBI		GRCr8
mRatBN7.2	1	245,237,821 - 245,256,618 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	245,237,826 - 245,256,495 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	253,359,208 - 253,377,911 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	260,053,858 - 260,072,550 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	252,705,669 - 252,724,353 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	266,123,864 - 266,142,621 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	266,123,870 - 266,142,538 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	273,554,805 - 273,573,677 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	251,592,429 - 251,611,097 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	251,855,583 - 251,874,603 (-)	NCBI
Celera	1	241,020,570 - 241,039,215 (-)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

Actr1a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955485	7,926,744 - 7,944,648 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955485	7,926,744 - 7,944,648 (+)	NCBI	ChiLan1.0	ChiLan1.0

ACTR1A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	114,366,764 - 114,390,285 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	114,372,086 - 114,395,607 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	99,082,765 - 99,106,305 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	102,547,695 - 102,570,766 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	102,547,695 - 102,570,766 (-)	Ensembl	panpan1.1		panPan2

ACTR1A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	14,972,512 - 14,990,434 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	14,972,515 - 14,990,434 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	15,144,838 - 15,162,754 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	15,446,553 - 15,464,473 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	15,443,623 - 15,464,462 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	14,991,502 - 15,009,420 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	15,030,653 - 15,048,570 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	15,163,237 - 15,181,156 (-)	NCBI		UU_Cfam_GSD_1.0

Actr1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	31,781,260 - 31,799,087 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936600	3,384,423 - 3,402,304 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936600	3,384,466 - 3,402,312 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACTR1A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	95,507,685 - 95,531,015 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	95,506,675 - 95,530,984 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	56,615,155 - 56,638,590 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Actr1a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624831	1,859,043 - 1,881,307 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624831	1,861,185 - 1,880,706 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

.

Variants in ACTR1A
608 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3


RefSeq Transcripts	XM_001928877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002338452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK237460	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK239531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK352463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK389443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK390851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT990623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01050280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000011578 ⟹ ENSSSCP00000011276

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	113,480,197 - 113,498,740 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000037989 ⟹ ENSSSCP00000037324

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	113,481,925 - 113,491,807 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000061558 ⟹ ENSSSCP00000043595

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	113,480,197 - 113,491,807 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000098121 ⟹ ENSSSCP00000076680

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	113,480,196 - 113,491,418 (-)	Ensembl

RefSeq Acc Id:

XM_001928877 ⟹ XP_001928912

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	113,480,196 - 113,498,794 (-)	NCBI

Sequence:

show sequence

TAGTTCTTCGAAAGCGAGGTCGGGCCGCTCCCTGGCCGTCCGGTACTGGAGGCCAGACTGCGCATGCGTTTCAGTGGCGTTAGCGGCAGACCGGTCTGGCAGTTCCTTCCTCGGAAGGAGAGATTCCT
CTGCCATGGAGTCCTACGATGTGATCGCCAACCAGCCTGTCGTGATCGACAACGGATCCGGTGTGATTAAAGCTGGCTTTGCTGGTGATCAAATCCCCAAGTACTGTTTTCCAAACTATGTGGGCAGA
CCCAAGCACGTTCGTGTCATGGCAGGCGCCCTCGAAGGTGACATCTTCATTGGCCCCAAAGCTGAGGAGCACCGAGGGCTGCTCTCCATCCGCTACCCCATGGAGCACGGCATTGTCAAGGACTGGAA
CGACATGGAGCGCATCTGGCAGTACGTCTATTCCAAGGACCAGCTGCAGACTTTCTCAGAGGAGCATCCTGTGCTCCTGACGGAGGCACCTCTAAACCCACGGAAAAACCGAGAACGAGCTGCTGAAG
TTTTCTTCGAGACCTTCAATGTGCCAGCCCTTTTCATCTCCATGCAAGCTGTGCTCAGCCTTTATGCCACTGGCAGGACCACGGGTGTGGTGCTGGATTCTGGGGATGGCGTCACCCACGCCGTGCCC
ATTTACGAGGGCTTCGCCATGCCCCACTCAATCATGCGCATCGACATCGCCGGCCGCGACGTCTCTCGCTTCCTTCGCCTTTACCTGCGCAAGGAGGGCTATGATTTCCACTCATCCTCCGAGTTTGA
GATTGTCAAGGCCATAAAAGAAAGAGCCTGCTACCTATCCATAAACCCCCAGAAGGATGAGACACTCGAGACGGAGAAAGCTCAGTATTACCTGCCTGACGGCAGCACCATTGAGATTGGTCCTTCCC
GATTCCGGGCCCCTGAGCTGCTGTTCAGGCCAGACCTGATCGGCGAGGAGAGCGAGGGCATCCACGAGGTGCTGGTGTTCGCCATCCAGAAGTCTGACATGGACCTGCGGCGCACGCTCTTCTCTAAC
ATCGTCCTCTCGGGAGGCTCCACCCTGTTCAAAGGTTTTGGTGACAGGCTACTGAGTGAAGTGAAGAAACTGGCTCCAAAAGACGTGAAGATCAGGATATCGGCACCGCAGGAGAGACTGTATTCCAC
GTGGATCGGGGGCTCCATCCTTGCCTCTCTGGACACCTTTAAGAAAATGTGGGTCTCTAAGAAGGAATACGAGGAAGATGGTGCCCGATCCATCCATAGGAAAACCTTCTAATATTGGGACATCATCT
TCACCTCTCTCTGAAGTTAACTCCACTTTAAAACTCGCTTTCTTGAGTCGAGGAACTGCCTGTGTGTATGAGTGTGTGTGTGTGGGTGTGTGGGTACGAGTGTGTGCGCATACAAGAGTGCCGTGTGG
CCCGGGGATCCCAGGGATCCCGGGGCCCAGAAAGGACGATGAACTACCCACGATGGTGACGGCCTGAGACCTGGGGTTGACCACTAACTGGCCCCTGACAGGGAAGAGTGGCTGCCAGAGGGCCCCAC
TCCGTCAGCTGGGCCTTTGTCTGGCTGTGTAGGGCTGTGTTGACTACCATGGGGAGACAGAGGGAGGTAAGCCCAACCCCTGGGAGACCTTGCTGCTGCCCATCCTAGGCTGGGCCAGTCCCACCCCC
ACCCCACCCAGGGTGCCCTGCAGCCCGAGGCAGCTGCTGCCTCCCCTTGCTCATCATTCTGCTCTCAATGCCTCTGGATCATGGATGGAGGCCTGGGGCCAGGGTTGAGTTCTGTCTGGTTTTGTTGC
AGTTTGGGTTTAGAAGGCTGGAGAAGCACTCCAGCAGTTATTACTGAGACTTTGGGGTCAGAAGGGGGCAGGATGCCCTCAACTTCACCTGGGGACCAGGACCACACTGGGCATTTGAGGTGGGCAGG
AGTAGTGCTGCTTCTGCTGGTGGCAAAGTTGTTGCTCCAACTCCAAGCCCACTTCCAGTGGGTCTCGGGAGAGTTTCAGGAGCCTGTTGGCCCCAGGCCCTGTCACTTGCTTTCCATCCATCCTTGGG
CAGTGCCATCTTCAGTTTTATTTATTGAAGTGTTTGTTCAGTACAGGGCCTGGGGAGAGGGGGCTCATTGCCTCCCACCCACCAGGCACCCTGTTCACACTAATGTTTACAGCACCTAAGCTTAGCAC
AGTGTCCAGGGCCCCGCCACTCCCTGCTCACGGTGAACTGACAGTATCCATAGGCCTCAGGACCACATGGGGTCAGAGACTACACTCAAAGTCACTCCAGCCTCTTTCTTTCTCCCTCTTCCACTTGC
TCACTGCCCTGGAATCAACAGACTGGTTGCTGGTTGGATTTTCTGAAGCAAGAGCTAGAATCACCCTTTAGCAGAGGCTCCGACCCAAGGAAAGGTGTTGGGGATCCAGCCTCCTTAGGAATGGAGAA
AGAGCTGCAATTAACCAAGTGGCCTTTTCCCACTCTAGCTGACCCGGTGGGGGGGGACTAGGTTGCAGAGGTGAGCAGGCTCCCCCCCAAGGCCGATTTATGCCATTCTTGTCTTTGGACTTGCTTGC
TTAGGGAGGGAGGGGTCAGACCAGAGGGCCAGGAGCTGATGGGATCAGGCTCACCTCCTCTGGTCCAGTAGGACCAGGTGCCTTCACTGGACTAGGCTGGCCTGGCAGTGGTCCCAAGGCCCTTCAGC
TCGGCTGGTACAAAGCTGAGGCCAGCAGATCTTCCCCGGCACCCTCACCTGTGACACTAAGACCTGCCCTGATCCCAGATTCCAGGCAGTATTCTCCCCCATGCCGTCCAACGACCAAAGGCCCTGCC
AGGTGTGGGCCGCAGCAGCAGGTGTGTGTGAAAGCGATGTGGCGACCCGCGGACTGCAGTGTGCTTAACCAGCTCACCTCCCTCCTCTTAGCCCAAGCCTGTCCCTCGCACAGCCTCGCACAAACCAC
GTTGCCTGGTGGGGCCCAGTGTACTTAAATAAAGTTGTTCCAATAGACA

hide sequence

RefSeq Acc Id:

XR_002338452

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	113,480,196 - 113,498,793 (-)	NCBI

Sequence:

show sequence

AGTTCTTCGAAAGCGAGGTCGGGCCGCTCCCTGGCCGTCCGGTACTGGAGGCCAGACTGCGCAT
GCGTTTCAGTGGCGTTAGCGGCAGACCGGTCTGGCAGTTCCTTCCTCGGAAGGAGAGATTCCTCTGCCATGGAGTCCTACGATGTGATCGCCAACCAGCCTGTCGTGATCGACAACGGATCCGGTGTG
ATTAAAGCTGGCTTTGCTGGTGATCAAATCCCCAAGTACTGTTTTCCAAACTATGTGGGCAGACCCAAGCACGTTCGTGTCATGGCAGGCGCCCTCGAAGGTGACATCTTCATTGGCCCCAAAGCTGA
GGAGCACCGAGGGCTGCTCTCCATCCGCTACCCCATGGAGCACGGCATTGTCAAGGACTGGAACGACATGGAGCGCATCTGGCAGTACGTCTATTCCAAGGACCAGCTGCAGACTTTCTCAGAGGAGC
ATCCTGTGCTCCTGACGGAGGCACCTCTAAACCCACGGAAAAACCGAGAACGAGCTGCTGAAGTTTTCTTCGAGACCTTCAATGTGCCAGCCCTTTTCATCTCCATGCAAGCTGTGCTCAGCCTTTAT
GCCACTGGCAGGACCACGGGTGTGGTGCTGGATTCTGGGGATGGCGTCACCCACGCCGTGCCCATTTACGAGGGCTTCGCCATGCCCCACTCAATCATGCGCATCGACATCGCCGGCCGCGACGTCTC
TCGCTTCCTTCGCCTTTACCTGCGCAAGGAGGGCTATGATTTCCACTCATCCTCCGAGTTTGAGATTGTCAAGGCCATAAAAGAAAGAGCCTGCTACCTATCCATAAACCCCCAGAAGGATGAGACAC
TCGAGACGGAGAAAGCTCAGTATTACCTGCCTGACGGCAGCACCATTGAGATTGGTCCTTCCCGATTCCGGGCCCCTGAGCTGCTGTTCAGGCCAGACCTGATCGGCGAGGAGAGCGAGGGCATCCAC
GAGGTGCTGGTGTTCGCCATCCAGAAGTCTGACATGGACCTGCGGCGCACGCTCTTCTCTAACATCGTCCTCTCGGGAGGCTCCACCCTGTTCAAAGGTTTTGGTGACAGGCTACTGAGTGAAGTGAA
GAAACTGGCTCCAAAAGACGTGAAGATCAGGGTAGGAGCCTGCTGGGGGCAGGGGTGGGGCGGCGGCTGCTGTGGAACCGGGCCTCCAAGGGTCTGGAGCGCCACCTGGTATGGCCTCCCCTCTTGCT
CCAAGCCTTTCAGACACCGCCAGGTGGCTCCCAGCTTCCACACTGTCCCTGAGGCCTGCCAGAGGGGAGGCCCCCCCCTCACTCACCCTCTTCACAAAGGGGGAAGGGGGCTAGGCTGAGGGCCCCAC
ATGTGGTCTTTCAGGGAAACTGTAACACTGACAGGAGACTGACTTTGGCCGCTCCCCTGTGACACAGCTCAGCATCGTAGAGACTGCTGAGCAGAGCCCGGCCTGCCTGAAGAAGGAGGGGTCCTGGA
TGGAGGAGGGCAGTTCCTGCCGTGGAGTCTGCTCCCCTCCAGCCCCCGGCAGACCCCGATCTTGCCCCCAGGTGGCCCCAGCTTCCCTGGGAACTATAGATACCTAGGGCTGCCAGAAACCTACTTCT
CCACATGAGCATCTGGCTGGCTGCAATCCCCCCCAGAGAGTCCACAGGGTCCAGCCAGCCCTGAAATGCAGCCGCTGCCTTCGGTGGTGAGAACTGGCCACAGAGCTGTGTGTTGGAAGGGAAGGGAG
GGGGCGGGTGGACGTCTCAGATGCCTCTTGCCACCCACCTTGCAGATATCGGCACCGCAGGAGAGACTGTATTCCACGTGGATCGGGGGCTCCATCCTTGCCTCTCTGGACACCTTTAAGAAAATGTG
GGTCTCTAAGAAGGAATACGAGGAAGATGGTGCCCGATCCATCCATAGGAAAACCTTCTAATATTGGGACATCATCTTCACCTCTCTCTGAAGTTAACTCCACTTTAAAACTCGCTTTCTTGAGTCGA
GGAACTGCCTGTGTGTATGAGTGTGTGTGTGTGGGTGTGTGGGTACGAGTGTGTGCGCATACAAGAGTGCCGTGTGGCCCGGGGATCCCAGGGATCCCGGGGCCCAGAAAGGACGATGAACTACCCAC
GATGGTGACGGCCTGAGACCTGGGGTTGACCACTAACTGGCCCCTGACAGGGAAGAGTGGCTGCCAGAGGGCCCCACTCCGTCAGCTGGGCCTTTGTCTGGCTGTGTAGGGCTGTGTTGACTACCATG
GGGAGACAGAGGGAGGTAAGCCCAACCCCTGGGAGACCTTGCTGCTGCCCATCCTAGGCTGGGCCAGTCCCACCCCCACCCCACCCAGGGTGCCCTGCAGCCCGAGGCAGCTGCTGCCTCCCCTTGCT
CATCATTCTGCTCTCAATGCCTCTGGATCATGGATGGAGGCCTGGGGCCAGGGTTGAGTTCTGTCTGGTTTTGTTGCAGTTTGGGTTTAGAAGGCTGGAGAAGCACTCCAGCAGTTATTACTGAGACT
TTGGGGTCAGAAGGGGGCAGGATGCCCTCAACTTCACCTGGGGACCAGGACCACACTGGGCATTTGAGGTGGGCAGGAGTAGTGCTGCTTCTGCTGGTGGCAAAGTTGTTGCTCCAACTCCAAGCCCA
CTTCCAGTGGGTCTCGGGAGAGTTTCAGGAGCCTGTTGGCCCCAGGCCCTGTCACTTGCTTTCCATCCATCCTTGGGCAGTGCCATCTTCAGTTTTATTTATTGAAGTGTTTGTTCAGTACAGGGCCT
GGGGAGAGGGGGCTCATTGCCTCCCACCCACCAGGCACCCTGTTCACACTAATGTTTACAGCACCTAAGCTTAGCACAGTGTCCAGGGCCCCGCCACTCCCTGCTCACGGTGAACTGACAGTATCCAT
AGGCCTCAGGACCACATGGGGTCAGAGACTACACTCAAAGTCACTCCAGCCTCTTTCTTTCTCCCTCTTCCACTTGCTCACTGCCCTGGAATCAACAGACTGGTTGCTGGTTGGATTTTCTGAAGCAA
GAGCTAGAATCACCCTTTAGCAGAGGCTCCGACCCAAGGAAAGGTGTTGGGGATCCAGCCTCCTTAGGAATGGAGAAAGAGCTGCAATTAACCAAGTGGCCTTTTCCCACTCTAGCTGACCCGGTGGG
GGGGGACTAGGTTGCAGAGGTGAGCAGGCTCCCCCCCAAGGCCGATTTATGCCATTCTTGTCTTTGGACTTGCTTGCTTAGGGAGGGAGGGGTCAGACCAGAGGGCCAGGAGCTGATGGGATCAGGCT
CACCTCCTCTGGTCCAGTAGGACCAGGTGCCTTCACTGGACTAGGCTGGCCTGGCAGTGGTCCCAAGGCCCTTCAGCTCGGCTGGTACAAAGCTGAGGCCAGCAGATCTTCCCCGGCACCCTCACCTG
TGACACTAAGACCTGCCCTGATCCCAGATTCCAGGCAGTATTCTCCCCCATGCCGTCCAACGACCAAAGGCCCTGCCAGGTGTGGGCCGCAGCAGCAGGTGTGTGTGAAAGCGATGTGGCGACCCGCG
GACTGCAGTGTGCTTAACCAGCTCACCTCCCTCCTCTTAGCCCAAGCCTGTCCCTCGCACAGCCTCGCACAAACCACGTTGCCTGGTGGGGCCCAGTGTACTTAAATAAAGTTGTTCCAATAGACA

hide sequence


Protein RefSeqs	XP_001928912	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000011276.3
	ENSSSCP00000037324
	ENSSSCP00025047567.1
	ENSSSCP00085003611
GenBank Protein	F2Z5G5	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_001928912 ⟸ XM_001928877

- UniProtKB:

A0A8D1PMN0 (UniProtKB/TrEMBL), A0A8D0VKQ1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVF
FETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPSRF
RAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF

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Ensembl Acc Id:

ENSSSCP00000011276 ⟸ ENSSSCT00000011578

Ensembl Acc Id:

ENSSSCP00000043595 ⟸ ENSSSCT00000061558

Ensembl Acc Id:

ENSSSCP00000037324 ⟸ ENSSSCT00000037989

Ensembl Acc Id:

ENSSSCP00000076680 ⟸ ENSSSCT00000098121

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000010585	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
	ENSSSCG00025076566	UniProtKB/Swiss-Prot
	ENSSSCG00085002748	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSSSCT00000011578	ENTREZGENE
	ENSSSCT00000011578.4	UniProtKB/Swiss-Prot
	ENSSSCT00000037989	ENTREZGENE
	ENSSSCT00025106107.1	UniProtKB/Swiss-Prot
	ENSSSCT00085004926	UniProtKB/Swiss-Prot
Gene3D-CATH	3.30.420.40	UniProtKB/Swiss-Prot
	Actin, Chain A, domain 4	UniProtKB/Swiss-Prot
InterPro	Actin	UniProtKB/Swiss-Prot
	Actin/actin-like_CS	UniProtKB/Swiss-Prot
	ATPase_NBD	UniProtKB/Swiss-Prot
NCBI Gene	ACTR1A	ENTREZGENE
PANTHER	ACTIN	UniProtKB/Swiss-Prot
Pfam	Actin	UniProtKB/Swiss-Prot
PRINTS	ACTIN	UniProtKB/Swiss-Prot
PROSITE	ACTINS_ACT_LIKE	UniProtKB/Swiss-Prot
SMART	ACTIN	UniProtKB/Swiss-Prot
Superfamily-SCOP	Actin-like ATPase domain	UniProtKB/Swiss-Prot
UniProt	A0A287A059_PIG	UniProtKB/TrEMBL
	A0A287AI87_PIG	UniProtKB/TrEMBL
	A0A8D0VKQ1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1PMN0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4FEE3_PIG	UniProtKB/TrEMBL
	ACTZ_PIG	UniProtKB/Swiss-Prot, ENTREZGENE
VGNC ID	VGNC:85049	ENTREZGENE