FAM171B (family with sequence similarity 171 member B) - Rat Genome Database

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Gene: FAM171B (family with sequence similarity 171 member B) Homo sapiens
Analyze
Symbol: FAM171B
Name: family with sequence similarity 171 member B
RGD ID: 1354368
HGNC Page HGNC:29412
Description: Predicted to be located in membrane. Predicted to be active in synapse.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: family with sequence similarity 171, member B; FLJ34104; KIAA1946
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382186,694,060 - 186,765,959 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2186,694,060 - 186,765,959 (+)EnsemblGRCh38hg38GRCh38
GRCh372187,558,787 - 187,630,686 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362187,267,034 - 187,336,759 (+)NCBINCBI36Build 36hg18NCBI36
Build 342187,384,294 - 187,454,016NCBI
Celera2181,154,411 - 181,224,139 (+)NCBICelera
Cytogenetic Map2q32.1NCBI
HuRef2179,418,653 - 179,488,386 (+)NCBIHuRef
CHM1_12187,564,785 - 187,634,506 (+)NCBICHM1_1
T2T-CHM13v2.02187,183,195 - 187,255,094 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FAM171BHumanNeurodevelopmental Disorders  IAGPRGD:146987948554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868

1 to 20 of 79 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FAM171BHuman1,2-dichloroethane decreases expressionISORGD:16156496480464ethylene dichloride results in decreased expression of FAM171B mRNACTDPMID:28189721|PMID:28960355
FAM171BHuman17beta-estradiol multiple interactionsEXP 6480464[Estradiol co-treated with Progesterone] results in increased expression of FAM171B mRNA; [Raloxifene Hydrochloride co-treated with more ...CTDPMID:20660070|PMID:21185374
FAM171BHuman17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of FAM171B mRNACTDPMID:31614463
FAM171BHuman17beta-estradiol multiple interactionsISORGD:15625266480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of FAM171B mRNACTDPMID:32741896
FAM171BHuman17beta-estradiol increases expressionISORGD:16156496480464Estradiol results in increased expression of FAM171B mRNACTDPMID:19484750|PMID:39298647
FAM171BHuman17beta-estradiol 3-benzoate multiple interactionsISORGD:15625266480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of FAM171B mRNACTDPMID:32741896
FAM171BHuman2,2',4,4'-Tetrabromodiphenyl ether affects expressionISORGD:161564964804642,2',4,4'-tetrabromodiphenyl ether affects the expression of FAM171B mRNACTDPMID:30294300
FAM171BHuman2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:16156496480464Tetrachlorodibenzodioxin affects the expression of FAM171B mRNACTDPMID:21570461|PMID:24680724
FAM171BHuman2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:15625266480464Tetrachlorodibenzodioxin results in increased expression of FAM171B mRNACTDPMID:32109520
FAM171BHuman2-hydroxypropanoic acid increases expressionEXP 6480464Lactic Acid results in increased expression of FAM171B mRNACTDPMID:30851411
FAM171BHuman3,3',5-triiodo-L-thyronine decreases expressionEXP 6480464Triiodothyronine results in decreased expression of FAM171B mRNACTDPMID:23397585
FAM171BHuman3,4-methylenedioxymethamphetamine decreases expressionISORGD:16156496480464N-Methyl-3,4-methylenedioxyamphetamine results in decreased expression of FAM171B mRNACTDPMID:20188158
FAM171BHuman3-isobutyl-1-methyl-7H-xanthine multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] more ...CTDPMID:28628672
FAM171BHuman4,4'-sulfonyldiphenol increases expressionISORGD:16156496480464bisphenol S results in increased expression of FAM171B mRNACTDPMID:39298647
FAM171BHumanaflatoxin B1 decreases expressionISORGD:16156496480464Aflatoxin B1 results in decreased expression of FAM171B mRNACTDPMID:19770486
FAM171BHumanaflatoxin B1 increases methylationEXP 6480464Aflatoxin B1 results in increased methylation of FAM171B intronCTDPMID:30157460
FAM171BHumanaflatoxin B1 decreases methylationEXP 6480464Aflatoxin B1 results in decreased methylation of FAM171B geneCTDPMID:27153756
FAM171BHumanarsane affects methylationEXP 6480464Arsenic affects the methylation of FAM171B geneCTDPMID:25304211
FAM171BHumanarsenic atom affects methylationEXP 6480464Arsenic affects the methylation of FAM171B geneCTDPMID:25304211
FAM171BHumanarsenite(3-) decreases expressionEXP 6480464arsenite results in decreased expression of FAM171B mRNACTDPMID:23974009

1 to 20 of 79 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FAM171BHumanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
FAM171BHumanmembrane located_inIEAUniProtKB-SubCell:SL-0162150520179 UniProtGO_REF:0000044
FAM171BHumansynapse is_active_inIEAUniProtKB:Q14CH0|ensembl:ENSMUSP00000062702150520179 EnsemblGO_REF:0000107


#
Reference Title
Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
PMID:11853319   PMID:14702039   PMID:21988832   PMID:25468996   PMID:26638075   PMID:27880917   PMID:28514442   PMID:30861353   PMID:31871319   PMID:33961781   PMID:34052262   PMID:34079125  
PMID:34273398   PMID:34702444   PMID:35384245   PMID:35844135   PMID:36976175   PMID:37478010   PMID:37689310   PMID:37915048   PMID:38117590   PMID:39349928  



FAM171B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382186,694,060 - 186,765,959 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2186,694,060 - 186,765,959 (+)EnsemblGRCh38hg38GRCh38
GRCh372187,558,787 - 187,630,686 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362187,267,034 - 187,336,759 (+)NCBINCBI36Build 36hg18NCBI36
Build 342187,384,294 - 187,454,016NCBI
Celera2181,154,411 - 181,224,139 (+)NCBICelera
Cytogenetic Map2q32.1NCBI
HuRef2179,418,653 - 179,488,386 (+)NCBIHuRef
CHM1_12187,564,785 - 187,634,506 (+)NCBICHM1_1
T2T-CHM13v2.02187,183,195 - 187,255,094 (+)NCBIT2T-CHM13v2.0
Fam171b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39283,642,889 - 83,713,878 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl283,642,980 - 83,713,830 (+)EnsemblGRCm39 Ensembl
GRCm38283,812,563 - 83,883,534 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl283,812,636 - 83,883,486 (+)EnsemblGRCm38mm10GRCm38
MGSCv37283,652,885 - 83,721,515 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36283,613,567 - 83,682,197 (+)NCBIMGSCv36mm8
MGSCv36284,723,794 - 84,798,606 (+)NCBIMGSCv36mm8
Celera285,461,824 - 85,536,326 (+)NCBICelera
Cytogenetic Map2DNCBI
cM Map249.33NCBI
Fam171b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8389,337,566 - 89,392,973 (+)NCBIGRCr8
mRatBN7.2368,930,755 - 68,986,113 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl368,930,822 - 68,986,127 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0371,210,048 - 71,265,419 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl371,210,301 - 71,262,615 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0377,735,454 - 77,790,821 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4367,037,142 - 67,092,329 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera368,301,422 - 68,356,773 (+)NCBICelera
Cytogenetic Map3q24NCBI
Fam171b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540311,509,969 - 11,532,616 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540311,512,731 - 11,532,550 (-)NCBIChiLan1.0ChiLan1.0
FAM171B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21389,372,526 - 89,445,428 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B89,387,518 - 89,460,408 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B73,985,579 - 74,058,803 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B191,784,554 - 191,859,440 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B191,786,078 - 191,859,440 (+)Ensemblpanpan1.1panPan2
FAM171B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13628,934,725 - 28,961,613 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3628,905,006 - 28,961,832 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3628,801,621 - 28,860,554 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03629,128,551 - 29,188,402 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3629,128,551 - 29,188,377 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13629,185,301 - 29,245,138 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03629,120,471 - 29,180,586 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03629,288,267 - 29,348,107 (+)NCBIUU_Cfam_GSD_1.0
Fam171b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303146,106,419 - 146,177,805 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650610,660,196 - 10,731,659 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650610,662,513 - 10,731,653 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAM171B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1591,719,511 - 91,798,010 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11591,724,228 - 91,798,012 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215101,733,215 - 101,806,942 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FAM171B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11072,229,785 - 72,301,767 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1072,229,841 - 72,301,902 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040127,204,559 - 127,276,880 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fam171b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248993,157,724 - 3,189,847 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in FAM171B
51 total Variants

1 to 10 of 83 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 2q31.1-33.2(chr2:174898848-203941548)x1 copy number loss See cases [RCV000050980] Chr2:174898848..203941548 [GRCh38]
Chr2:175763576..204806271 [GRCh37]
Chr2:175471822..204514516 [NCBI36]
Chr2:2q31.1-33.2
pathogenic
GRCh38/hg38 2q31.1-33.1(chr2:176304445-202039790)x1 copy number loss See cases [RCV000052558] Chr2:176304445..202039790 [GRCh38]
Chr2:177169173..202904513 [GRCh37]
Chr2:176877419..202612758 [NCBI36]
Chr2:2q31.1-33.1
pathogenic
GRCh38/hg38 2q31.2-33.1(chr2:177874070-198525492)x1 copy number loss See cases [RCV000052559] Chr2:177874070..198525492 [GRCh38]
Chr2:178738797..199390216 [GRCh37]
Chr2:178447043..199098461 [NCBI36]
Chr2:2q31.2-33.1
pathogenic
GRCh38/hg38 2q32.1-33.1(chr2:186027472-201059372)x1 copy number loss See cases [RCV000135876] Chr2:186027472..201059372 [GRCh38]
Chr2:186892199..201924095 [GRCh37]
Chr2:186600444..201632340 [NCBI36]
Chr2:2q32.1-33.1
pathogenic
GRCh38/hg38 2q31.1-32.2(chr2:171429233-189179568)x1 copy number loss See cases [RCV000136850] Chr2:171429233..189179568 [GRCh38]
Chr2:172285743..190044294 [GRCh37]
Chr2:171993989..189752539 [NCBI36]
Chr2:2q31.1-32.2
pathogenic
GRCh38/hg38 2q31.1-32.2(chr2:174634502-189000964)x1 copy number loss See cases [RCV000136861] Chr2:174634502..189000964 [GRCh38]
Chr2:175499230..189865690 [GRCh37]
Chr2:175207476..189573935 [NCBI36]
Chr2:2q31.1-32.2
pathogenic
GRCh38/hg38 2q31.3-32.1(chr2:180942902-187372388)x1 copy number loss See cases [RCV000137116] Chr2:180942902..187372388 [GRCh38]
Chr2:181807629..188237115 [GRCh37]
Chr2:181515874..187945360 [NCBI36]
Chr2:2q31.3-32.1
pathogenic
GRCh38/hg38 2q31.3-32.3(chr2:181758701-192015392)x1 copy number loss See cases [RCV000138253] Chr2:181758701..192015392 [GRCh38]
Chr2:182623428..192880118 [GRCh37]
Chr2:182331673..192588363 [NCBI36]
Chr2:2q31.3-32.3
pathogenic
GRCh38/hg38 2q31.3-36.2(chr2:180513793-224302848)x3 copy number gain See cases [RCV000139446] Chr2:180513793..224302848 [GRCh38]
Chr2:181378520..225167565 [GRCh37]
Chr2:181086765..224875809 [NCBI36]
Chr2:2q31.3-36.2
pathogenic
GRCh38/hg38 2q31.2-32.3(chr2:177827730-195125329)x1 copy number loss See cases [RCV000141735] Chr2:177827730..195125329 [GRCh38]
Chr2:178692457..195990053 [GRCh37]
Chr2:178400703..195698298 [NCBI36]
Chr2:2q31.2-32.3
pathogenic
1 to 10 of 83 rows

Predicted Target Of
Summary Value
Count of predictions:1056
Count of miRNA genes:617
Interacting mature miRNAs:721
Transcripts:ENST00000304698
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
407056965GWAS705941_Hblood protein measurement QTL GWAS705941 (human)3e-13blood protein amount (VT:0005416)blood protein measurement (CMO:0000028)2186736912186736913Human

SHGC-85093  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372187,578,277 - 187,578,548UniSTSGRCh37
Build 362187,286,522 - 187,286,793RGDNCBI36
Celera2181,173,894 - 181,174,165RGD
Cytogenetic Map2q32.1UniSTS
HuRef2179,438,147 - 179,438,418UniSTS
WI-17454  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372187,561,011 - 187,561,143UniSTSGRCh37
Build 362187,269,256 - 187,269,388RGDNCBI36
Celera2181,156,636 - 181,156,768RGD
Cytogenetic Map2q32.1UniSTS
HuRef2179,420,876 - 179,421,008UniSTS
GeneMap99-GB4 RH Map2590.19UniSTS
Whitehead-RH Map2918.4UniSTS
D2S2028  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372187,623,516 - 187,623,719UniSTSGRCh37
Build 362187,331,761 - 187,331,964RGDNCBI36
Celera2181,219,141 - 181,219,344RGD
Cytogenetic Map2q32.1UniSTS
HuRef2179,483,388 - 179,483,591UniSTS
Whitehead-YAC Contig Map2 UniSTS
WI-11078  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372187,630,456 - 187,630,630UniSTSGRCh37
Build 362187,338,701 - 187,338,875RGDNCBI36
Celera2181,226,080 - 181,226,254RGD
Cytogenetic Map2q32.1UniSTS
HuRef2179,490,326 - 179,490,500UniSTS
GeneMap99-GB4 RH Map2591.54UniSTS
Whitehead-RH Map2919.8UniSTS
D2S2500  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372187,604,970 - 187,605,151UniSTSGRCh37
Build 362187,313,215 - 187,313,396RGDNCBI36
Celera2181,200,595 - 181,200,776RGD
Cytogenetic Map2q32.1UniSTS
HuRef2179,464,842 - 179,465,023UniSTS
GeneMap99-GB4 RH Map2590.19UniSTS
Whitehead-RH Map2917.2UniSTS
Whitehead-YAC Contig Map2 UniSTS
D2S225  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2q32.1UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2424 2788 2236 4961 1717 2337 4 615 1814 457 2268 7145 6328 51 3726 845 1729 1612 172



Ensembl Acc Id: ENST00000304698   ⟹   ENSP00000304108
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2186,694,060 - 186,765,959 (+)Ensembl
Ensembl Acc Id: ENST00000612606   ⟹   ENSP00000478477
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2186,694,080 - 186,751,257 (+)Ensembl
RefSeq Acc Id: NM_177454   ⟹   NP_803237
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382186,694,060 - 186,765,959 (+)NCBI
GRCh372187,558,789 - 187,630,686 (+)NCBI
Build 362187,267,034 - 187,336,759 (+)NCBI Archive
Celera2181,154,411 - 181,224,139 (+)RGD
HuRef2179,418,653 - 179,488,386 (+)RGD
CHM1_12187,564,785 - 187,634,506 (+)NCBI
T2T-CHM13v2.02187,183,195 - 187,255,094 (+)NCBI
Sequence:
RefSeq Acc Id: NP_803237   ⟸   NM_177454
- Peptide Label: precursor
- UniProtKB: Q8TF55 (UniProtKB/Swiss-Prot),   Q8NB81 (UniProtKB/Swiss-Prot),   Q8N970 (UniProtKB/Swiss-Prot),   Q8N3K1 (UniProtKB/Swiss-Prot),   Q8N1Y4 (UniProtKB/Swiss-Prot),   Q53SK3 (UniProtKB/Swiss-Prot),   Q8WYR8 (UniProtKB/Swiss-Prot),   Q6P995 (UniProtKB/Swiss-Prot),   A8K122 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000478477   ⟸   ENST00000612606
Ensembl Acc Id: ENSP00000304108   ⟸   ENST00000304698
Name Modeler Protein Id AA Range Protein Structure
AF-Q6P995-F1-model_v2 AlphaFold Q6P995 1-826 view protein structure

RGD ID:6862280
Promoter ID:EPDNEW_H4305
Type:initiation region
Name:FAM171B_1
Description:family with sequence similarity 171 member B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382186,694,062 - 186,694,122EPDNEW
RGD ID:6797276
Promoter ID:HG_KWN:36291
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:ENST00000272804,   OTTHUMT00000334679,   UC002UPR.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362187,266,806 - 187,267,306 (+)MPROMDB


1 to 36 of 36 rows
Database
Acc Id
Source(s)
COSMIC FAM171B COSMIC
Ensembl Genes ENSG00000144369 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000304698 ENTREZGENE
  ENST00000304698.10 UniProtKB/Swiss-Prot
GTEx ENSG00000144369 GTEx
HGNC ID HGNC:29412 ENTREZGENE
Human Proteome Map FAM171B Human Proteome Map
InterPro FAM171_C UniProtKB/Swiss-Prot
  FAM171_N UniProtKB/Swiss-Prot
  Uncharacterised_FAM171 UniProtKB/Swiss-Prot
KEGG Report hsa:165215 UniProtKB/Swiss-Prot
NCBI Gene 165215 ENTREZGENE
OMIM 620309 OMIM
PANTHER PROTEIN FAM171B UniProtKB/Swiss-Prot
  PTHR31626 UniProtKB/Swiss-Prot
Pfam FAM171A1-2-B_C UniProtKB/Swiss-Prot
  UPF0560 UniProtKB/Swiss-Prot
PharmGKB PA162387220 PharmGKB
UniProt A8K122 ENTREZGENE, UniProtKB/TrEMBL
  B3LEU9_HUMAN UniProtKB/TrEMBL
  F171B_HUMAN UniProtKB/Swiss-Prot
  Q53SK3 ENTREZGENE
  Q6P995 ENTREZGENE
  Q8N1Y4 ENTREZGENE
  Q8N3K1 ENTREZGENE
  Q8N970 ENTREZGENE
  Q8NB81 ENTREZGENE
  Q8TF55 ENTREZGENE
  Q8WYR8 ENTREZGENE
UniProt Secondary Q53SK3 UniProtKB/Swiss-Prot
  Q8N1Y4 UniProtKB/Swiss-Prot
  Q8N3K1 UniProtKB/Swiss-Prot
  Q8N970 UniProtKB/Swiss-Prot
  Q8NB81 UniProtKB/Swiss-Prot
  Q8TF55 UniProtKB/Swiss-Prot
  Q8WYR8 UniProtKB/Swiss-Prot
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 FAM171B  family with sequence similarity 171 member B    family with sequence similarity 171, member B  Symbol and/or name change 5135510 APPROVED