TAAR9 (trace amine associated receptor 9)

Advanced Search (OLGA)

Gene: TAAR9 (trace amine associated receptor 9) Homo sapiens

Analyze

Symbol:

TAAR9

Name:

trace amine associated receptor 9

RGD ID:

1352345

HGNC Page

HGNC:20977

Description:

Predicted to enable trace-amine receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in plasma membrane.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

TA3; TAR3; TAR9; trace amine associated receptor 9 (gene/pseudogene); trace amine receptor 3; trace amine receptor 9; trace amine-associated receptor 9; TRAR3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

NCBI Annotation Information:

Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	132,538,277 - 132,539,336 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	132,538,277 - 132,539,336 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	132,859,416 - 132,860,475 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	132,901,120 - 132,902,168 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	132,901,119 - 132,902,168	NCBI
Celera	6	133,606,264 - 133,607,312 (+)	NCBI		Celera
Cytogenetic Map	6	q23.2	NCBI
HuRef	6	130,434,345 - 130,435,393 (+)	NCBI		HuRef
CHM1_1	6	133,123,100 - 133,124,148 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	133,733,231 - 133,734,290 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

ammonium chloride (ISO)

benzo[a]pyrene (EXP)

bisphenol A (ISO)

CGP 52608 (EXP)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adenylate cyclase-activating G protein-coupled receptor signaling pathway (IEA,ISS)

G protein-coupled receptor signaling pathway (IBA,IEA,TAS)

sensory perception of smell (ISS)

Cellular Component

membrane (IEA)

plasma membrane (IBA,IEA,ISS)

Molecular Function

G protein-coupled receptor activity (IEA,TAS)

protein binding (IPI)

trace-amine receptor activity (IBA,IEA,ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11459929	PMID:12477932	PMID:14559210	PMID:15718104	PMID:16878137	PMID:18240029	PMID:20006992	PMID:21873635	PMID:32296183

Genomics

Comparative Map Data

TAAR9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	132,538,277 - 132,539,336 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	132,538,277 - 132,539,336 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	132,859,416 - 132,860,475 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	132,901,120 - 132,902,168 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	132,901,119 - 132,902,168	NCBI
Celera	6	133,606,264 - 133,607,312 (+)	NCBI		Celera
Cytogenetic Map	6	q23.2	NCBI
HuRef	6	130,434,345 - 130,435,393 (+)	NCBI		HuRef
CHM1_1	6	133,123,100 - 133,124,148 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	133,733,231 - 133,734,290 (+)	NCBI		T2T-CHM13v2.0

Taar9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	23,984,386 - 23,985,432 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	23,984,386 - 23,985,432 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	24,108,488 - 24,109,534 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	24,108,488 - 24,109,534 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	23,828,294 - 23,829,340 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	23,797,904 - 23,798,950 (-)	NCBI		MGSCv36	mm8
Celera	10	25,041,558 - 25,042,604 (-)	NCBI		Celera
Cytogenetic Map	10	A4	NCBI
cM Map	10	11.44	NCBI

Taar9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	23,094,225 - 23,095,241 (+)	NCBI		GRCr8
mRatBN7.2	1	21,274,972 - 21,275,988 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	21,274,942 - 21,275,988 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	21,052,075 - 21,053,091 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	27,052,106 - 27,053,122 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	21,251,807 - 21,252,823 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	22,319,353 - 22,320,369 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	22,319,353 - 22,320,369 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	23,769,619 - 23,800,526 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	21,799,726 - 21,800,742 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	21,802,670 - 21,803,687 (+)	NCBI
Celera	1	20,025,685 - 20,026,701 (+)	NCBI		Celera
Cytogenetic Map	1	p12	NCBI

TAAR9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	152,520,647 - 152,521,894 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	150,427,731 - 150,428,978 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	130,314,387 - 130,315,634 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	134,422,548 - 134,423,795 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

Taar9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	120,762,127 - 120,763,175 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936560	541,345 - 542,385 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LOC100152013
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	31,161,407 - 31,162,453 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	31,161,407 - 31,162,453 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	34,682,065 - 34,683,111 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TAAR9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666040	13,194,207 - 13,195,279 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Taar9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	6,575,392 - 6,576,327 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624753	6,575,392 - 6,576,460 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TAAR9
27 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 6q23.2(chr6:132455272-133141153)x3	copy number gain	See cases [RCV000053388]	Chr6:132455272..133141153 [GRCh38] Chr6:132776411..133462292 [GRCh37] Chr6:132818104..133503985 [NCBI36] Chr6:6q23.2	uncertain significance
GRCh38/hg38 6q13-24.1(chr6:74382807-142040500)x3	copy number gain	See cases [RCV000139729]	Chr6:74382807..142040500 [GRCh38] Chr6:75092523..142361637 [GRCh37] Chr6:75149243..142403330 [NCBI36] Chr6:6q13-24.1	pathogenic
GRCh37/hg19 6q23.2(chr6:132859724-132910636)x1	copy number loss	See cases [RCV000446076]	Chr6:132859724..132910636 [GRCh37] Chr6:6q23.2	uncertain significance
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)x3	copy number gain	See cases [RCV000512067]	Chr6:156975..170919482 [GRCh37] Chr6:6p25.3-q27	pathogenic
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)	copy number gain	See cases [RCV000510595]	Chr6:156975..170919482 [GRCh37] Chr6:6p25.3-q27	pathogenic
NM_175057.4(TAAR9):c.650A>G (p.Tyr217Cys)	single nucleotide variant	not specified [RCV004306904]	Chr6:132538939 [GRCh38] Chr6:132860078 [GRCh37] Chr6:6q23.2	uncertain significance
GRCh37/hg19 6q23.2-23.3(chr6:131388023-137469640)x1	copy number loss	not provided [RCV000682724]	Chr6:131388023..137469640 [GRCh37] Chr6:6q23.2-23.3	pathogenic
GRCh37/hg19 6q23.2-23.3(chr6:132002460-137160850)x1	copy number loss	not provided [RCV000682725]	Chr6:132002460..137160850 [GRCh37] Chr6:6q23.2-23.3	pathogenic
GRCh37/hg19 6p25.3-q27(chr6:60107-171054786)x3	copy number gain	not provided [RCV000745400]	Chr6:60107..171054786 [GRCh37] Chr6:6p25.3-q27	pathogenic
GRCh37/hg19 6p25.3-q27(chr6:108666-170980171)x3	copy number gain	not provided [RCV000745403]	Chr6:108666..170980171 [GRCh37] Chr6:6p25.3-q27	pathogenic
GRCh37/hg19 6p25.3-q27(chr6:165632-170919470)x3	copy number gain	not provided [RCV000745404]	Chr6:165632..170919470 [GRCh37] Chr6:6p25.3-q27	pathogenic
GRCh37/hg19 6q23.2(chr6:132794904-132879258)x3	copy number gain	not provided [RCV000746039]	Chr6:132794904..132879258 [GRCh37] Chr6:6q23.2	benign
Single allele	deletion	Interstitial 6q microdeletion syndrome [RCV002280353]	Chr6:115941808..133892653 [GRCh38] Chr6:6q22.1-23.2	pathogenic
GRCh37/hg19 6q23.1-23.3(chr6:130769034-136009217)x1	copy number loss	not provided [RCV001829086]	Chr6:130769034..136009217 [GRCh37] Chr6:6q23.1-23.3	pathogenic
NM_175057.4(TAAR9):c.202A>G (p.Asn68Asp)	single nucleotide variant	not specified [RCV004304479]	Chr6:132538491 [GRCh38] Chr6:132859630 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.935C>A (p.Ala312Asp)	single nucleotide variant	not specified [RCV004116227]	Chr6:132539224 [GRCh38] Chr6:132860363 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.724T>G (p.Ser242Ala)	single nucleotide variant	not specified [RCV004157704]	Chr6:132539013 [GRCh38] Chr6:132860152 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.206T>A (p.Phe69Tyr)	single nucleotide variant	not specified [RCV004212173]	Chr6:132538495 [GRCh38] Chr6:132859634 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.1039A>G (p.Thr347Ala)	single nucleotide variant	not specified [RCV004153952]	Chr6:132539328 [GRCh38] Chr6:132860467 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.83C>G (p.Ser28Trp)	single nucleotide variant	not specified [RCV004105224]	Chr6:132538372 [GRCh38] Chr6:132859511 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.406G>C (p.Asp136His)	single nucleotide variant	not specified [RCV004192487]	Chr6:132538695 [GRCh38] Chr6:132859834 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.937T>C (p.Phe313Leu)	single nucleotide variant	not specified [RCV004087650]	Chr6:132539226 [GRCh38] Chr6:132860365 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.215C>T (p.Ala72Val)	single nucleotide variant	not specified [RCV004221703]	Chr6:132538504 [GRCh38] Chr6:132859643 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.175C>G (p.His59Asp)	single nucleotide variant	not specified [RCV004123077]	Chr6:132538464 [GRCh38] Chr6:132859603 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.944A>G (p.Tyr315Cys)	single nucleotide variant	not specified [RCV004182973]	Chr6:132539233 [GRCh38] Chr6:132860372 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.790A>G (p.Met264Val)	single nucleotide variant	not specified [RCV004121790]	Chr6:132539079 [GRCh38] Chr6:132860218 [GRCh37] Chr6:6q23.2	likely benign
NM_175057.4(TAAR9):c.793G>A (p.Ala265Thr)	single nucleotide variant	not specified [RCV004079156]	Chr6:132539082 [GRCh38] Chr6:132860221 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.566G>T (p.Gly189Val)	single nucleotide variant	not specified [RCV004250348]	Chr6:132538855 [GRCh38] Chr6:132859994 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.878A>G (p.Tyr293Cys)	single nucleotide variant	not specified [RCV004335295]	Chr6:132539167 [GRCh38] Chr6:132860306 [GRCh37] Chr6:6q23.2	uncertain significance
GRCh37/hg19 6q22.31-23.3(chr6:120218852-137160850)x1	copy number loss	not provided [RCV003482930]	Chr6:120218852..137160850 [GRCh37] Chr6:6q22.31-23.3	pathogenic
NM_175057.4(TAAR9):c.246A>T (p.Gly82=)	single nucleotide variant	not provided [RCV003432046]	Chr6:132538535 [GRCh38] Chr6:132859674 [GRCh37] Chr6:6q23.2	likely benign
NM_175057.4(TAAR9):c.111C>T (p.Ala37=)	single nucleotide variant	not provided [RCV003428949]	Chr6:132538400 [GRCh38] Chr6:132859539 [GRCh37] Chr6:6q23.2	likely benign
NM_175057.4(TAAR9):c.915T>C (p.Ala305=)	single nucleotide variant	not provided [RCV003432047]	Chr6:132539204 [GRCh38] Chr6:132860343 [GRCh37] Chr6:6q23.2	likely benign
GRCh37/hg19 6q23.2-24.2(chr6:131569837-145572239)x3	copy number gain	not specified [RCV003986663]	Chr6:131569837..145572239 [GRCh37] Chr6:6q23.2-24.2	pathogenic
GRCh37/hg19 6q22.31-25.3(chr6:119840686-156623091)x3	copy number gain	not specified [RCV003986631]	Chr6:119840686..156623091 [GRCh37] Chr6:6q22.31-25.3	pathogenic
NM_175057.4(TAAR9):c.916A>C (p.Met306Leu)	single nucleotide variant	not specified [RCV004466102]	Chr6:132539205 [GRCh38] Chr6:132860344 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.964A>G (p.Ile322Val)	single nucleotide variant	not specified [RCV004466104]	Chr6:132539253 [GRCh38] Chr6:132860392 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.491G>A (p.Ser164Asn)	single nucleotide variant	not specified [RCV004466097]	Chr6:132538780 [GRCh38] Chr6:132859919 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.725C>T (p.Ser242Leu)	single nucleotide variant	not specified [RCV004466100]	Chr6:132539014 [GRCh38] Chr6:132860153 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.905A>G (p.Tyr302Cys)	single nucleotide variant	not specified [RCV004466101]	Chr6:132539194 [GRCh38] Chr6:132860333 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.611T>C (p.Leu204Pro)	single nucleotide variant	not specified [RCV004466098]	Chr6:132538900 [GRCh38] Chr6:132860039 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.614T>C (p.Leu205Pro)	single nucleotide variant	not specified [RCV004466099]	Chr6:132538903 [GRCh38] Chr6:132860042 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.172C>T (p.Leu58Phe)	single nucleotide variant	not specified [RCV004466096]	Chr6:132538461 [GRCh38] Chr6:132859600 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.917T>C (p.Met306Thr)	single nucleotide variant	not specified [RCV004671032]	Chr6:132539206 [GRCh38] Chr6:132860345 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.165T>G (p.Ile55Met)	single nucleotide variant	not specified [RCV004671033]	Chr6:132538454 [GRCh38] Chr6:132859593 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.383T>C (p.Val128Ala)	single nucleotide variant	not specified [RCV004671034]	Chr6:132538672 [GRCh38] Chr6:132859811 [GRCh37] Chr6:6q23.2	uncertain significance
NM_175057.4(TAAR9):c.233A>T (p.Asp78Val)	single nucleotide variant	not specified [RCV004671035]	Chr6:132538522 [GRCh38] Chr6:132859661 [GRCh37] Chr6:6q23.2	uncertain significance
NC_000006.11:g.(?_131894423)_(133849943_?)del	deletion	not provided [RCV004578838]	Chr6:131894423..133849943 [GRCh37] Chr6:6q23.2	pathogenic

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	51
Count of miRNA genes:	44
Interacting mature miRNAs:	45
Transcripts:	ENST00000434551
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region

UniSTS:481470

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	132,859,429 - 132,860,475	UniSTS	GRCh37
Celera	6	133,606,266 - 133,607,312	UniSTS
HuRef	6	130,434,347 - 130,435,393	UniSTS

UniSTS:484171

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	132,859,606 - 132,860,475	UniSTS	GRCh37
Celera	6	133,606,443 - 133,607,312	UniSTS
HuRef	6	130,434,524 - 130,435,393	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system	sensory system
46	145	143	104	392	64	94	19	181	15	153	472	411	312	92	145	63	4

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_175057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF380189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL513524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY183469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC069083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KF459634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000434551 ⟹ ENSP00000424607

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	132,538,277 - 132,539,336 (+)	Ensembl

RefSeq Acc Id:

NM_175057 ⟹ NP_778227

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	6	132,538,277 - 132,539,336 (+)	NCBI
GRCh37	6	132,859,427 - 132,860,475 (+)	RGD
Build 36	6	132,901,120 - 132,902,168 (+)	NCBI Archive
Celera	6	133,606,264 - 133,607,312 (+)	RGD
HuRef	6	130,434,345 - 130,435,393 (+)	ENTREZGENE
CHM1_1	6	133,123,100 - 133,124,148 (+)	NCBI
T2T-CHM13v2.0	6	133,733,231 - 133,734,290 (+)	NCBI

Sequence:

show sequence

CAATGGTGAACAATTTCTCCCAAGCTGAGGCTGTGGAGCTGTGTTACAAGAACGTGAACGAATC
CTGCATTAAAACTCCTTACTCGCCAGGTCCTCGATCTATCCTCTACGCCGTCCTTGGTTTTGGG
GCTGTGCTGGCAGCGTTTGGAAACTTACTGGTCATGATTGCTATCCTTCACTTCAAACAACTGC
ACACACCTACAAACTTTCTGATTGCGTCGCTGGCCTGTGCTGACTTCTTGGTGGGAGTCACTGT
GATGCCCTTCAGCACAGTGAGGTCTGTGGAGAGCTGTTGGTACTTTGGGGACAGTTACTGTAAA
TTCCATACATGTTTTGACACATCCTTCTGTTTTGCTTCTTTATTTCATTTATGCTGTATCTCTG
TTGATAGATACATTGCTGTTACTGATCCTCTGACCTATCCAACCAAGTTTACTGTGTCAGTTTC
AGGGATATGCATTGTTCTTTCCTGGTTCTTTTCTGTCACATACAGCTTTTCGATCTTTTACACG
GGAGCCAACGAAGAAGGAATTGAGGAATTAGTAGTTGCTCTAACCTGTGTAGGAGGCTGCCAGG
CTCCACTGAATCAAAACTGGGTCCTACTTTGTTTTCTTCTATTCTTTATACCCAATGTCGCCAT
GGTGTTTATATACAGTAAGATATTTTTGGTGGCCAAGCATCAGGCTAGGAAGATAGAAAGTACA
GCCAGCCAAGCTCAGTCCTCCTCAGAGAGTTACAAGGAAAGAGTAGCAAAAAGAGAGAGAAAGG
CTGCCAAAACCTTGGGAATTGCTATGGCAGCATTTCTTGTCTCTTGGCTACCATACCTCGTTGA
TGCAGTGATTGATGCTTATATGAATTTTATAACTCCTCCTTATGTTTATGAGATTTTAGTTTGG
TGTGTTTATTATAATTCAGCTATGAACCCCTTGATTTATGCTTTCTTTTACCAATGGTTTGGGA
AGGCAATAAAACTTATTGTAAGCGGCAAGGTCTTAAGGACTGATTCGTCAACAACTAATTTATT
TTCTGAAGAAGTAGAGACAGATTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_778227	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAK71240	(Get FASTA)	NCBI Sequence Viewer
	AAO24660	(Get FASTA)	NCBI Sequence Viewer
	EAW48028	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000424607
	ENSP00000424607.2
GenBank Protein	Q96RI9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_778227 ⟸ NM_175057

- UniProtKB:

Q96RI9 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MVNNFSQAEAVELCYKNVNESCIKTPYSPGPRSILYAVLGFGAVLAAFGNLLVMIAILHFKQLH
TPTNFLIASLACADFLVGVTVMPFSTVRSVESCWYFGDSYCKFHTCFDTSFCFASLFHLCCISV
DRYIAVTDPLTYPTKFTVSVSGICIVLSWFFSVTYSFSIFYTGANEEGIEELVVALTCVGGCQA
PLNQNWVLLCFLLFFIPNVAMVFIYSKIFLVAKHQARKIESTASQAQSSSESYKERVAKRERKA
AKTLGIAMAAFLVSWLPYLVDAVIDAYMNFITPPYVYEILVWCVYYNSAMNPLIYAFFYQWFGK
AIKLIVSGKVLRTDSSTTNLFSEEVETD

hide sequence

Ensembl Acc Id:

ENSP00000424607 ⟸ ENST00000434551

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q96RI9-F1-model_v2	AlphaFold	Q96RI9	1-348	view protein structure

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:20977	AgrOrtholog
COSMIC	TAAR9	COSMIC
Ensembl Genes	ENSG00000237110	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000434551	ENTREZGENE
	ENST00000434551.3	UniProtKB/Swiss-Prot
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/Swiss-Prot
GTEx	ENSG00000237110	GTEx
HGNC ID	HGNC:20977	ENTREZGENE
Human Proteome Map	TAAR9	Human Proteome Map
InterPro	GPCR_Rhodpsn	UniProtKB/Swiss-Prot
	GPCR_Rhodpsn_7TM	UniProtKB/Swiss-Prot
	TAAR	UniProtKB/Swiss-Prot
	TAAR_fam	UniProtKB/Swiss-Prot
KEGG Report	hsa:134860	UniProtKB/Swiss-Prot
NCBI Gene	134860	ENTREZGENE
OMIM	608282	OMIM
PANTHER	HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	UniProtKB/Swiss-Prot
	TRACE AMINE-ASSOCIATED RECEPTOR 9	UniProtKB/Swiss-Prot
Pfam	7tm_1	UniProtKB/Swiss-Prot
PharmGKB	PA134931528	PharmGKB
PRINTS	GPCRRHODOPSN	UniProtKB/Swiss-Prot
	TRACEAMINER	UniProtKB/Swiss-Prot
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/Swiss-Prot
	G_PROTEIN_RECEP_F1_2	UniProtKB/Swiss-Prot
SMART	7TM_GPCR_Srsx	UniProtKB/Swiss-Prot
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/Swiss-Prot
UniProt	Q96RI9	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-05-11	TAAR9	trace amine associated receptor 9	TAAR9	trace amine associated receptor 9 (gene/pseudogene)	Symbol and/or name change	19259463	PROVISIONAL
2011-07-27	TAAR9	trace amine associated receptor 9 (gene/pseudogene)	TAAR9	trace amine associated receptor 9	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message