Advanced Search (OLGA)

Gene: GANC (glucosidase alpha, neutral C) Homo sapiens

Subscribe to Updates

Analyze

Symbol:

GANC

Name:

glucosidase alpha, neutral C

RGD ID:

1350162

HGNC Page

HGNC:4139

Description:

Predicted to enable alpha-1,4-glucosidase activity. Predicted to be involved in N-glycan processing.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

FLJ40082; glucosidase, alpha; MGC138256; neutral alpha-glucosidase C; neutral C

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Ganc (glucosidase, alpha; neutral C)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Ganc (glucosidase, alpha; neutral C)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Chinchilla lanigera (long-tailed chinchilla):	Ganc (glucosidase alpha, neutral C)	NCBI	Ortholog
Canis lupus familiaris (dog):	GANC (glucosidase alpha, neutral C)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ganc (glucosidase alpha, neutral C)	NCBI	Ortholog
Sus scrofa (pig):	GANC (glucosidase alpha, neutral C)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, Panther, Treefam
Chlorocebus sabaeus (green monkey):	GANC (glucosidase alpha, neutral C)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Ganc (glucosidase alpha, neutral C)	NCBI	Ortholog
Other homologs ²
Mus musculus (house mouse):	Ganab (alpha glucosidase 2 alpha neutral subunit)	HGNC	OrthoMCL
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Ganc (glucosidase, alpha; neutral C)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ganc (glucosidase, alpha; neutral C)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ganc (glucosidase, alpha; neutral C)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|ZFIN)
Drosophila melanogaster (fruit fly):	GCS2alpha	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	ROT2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	aagr-4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	ganc.L	Alliance	DIOPT (Xenbase)
Xenopus tropicalis (tropical clawed frog):	ganc	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	42,273,201 - 42,353,666 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	42,273,201 - 42,353,666 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	42,565,399 - 42,645,864 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	40,353,658 - 40,433,156 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	40,353,785 - 40,432,359	NCBI
Celera	15	19,334,065 - 19,413,574 (+)	NCBI		Celera
Cytogenetic Map	15	q15.1	NCBI
HuRef	15	19,414,521 - 19,494,038 (+)	NCBI		HuRef
CHM1_1	15	42,684,852 - 42,764,352 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	40,079,234 - 40,159,701 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
GANC	Human	autosomal recessive limb-girdle muscular dystrophy type 2A		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Autosomal recessive limb-girdle muscular dystrophy type 2A	ClinVar	PMID:10330340 more ...
GANC	Human	Bloom syndrome		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Bloom syndrome	ClinVar	PMID:28492532
GANC	Human	colorectal cancer		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Familial colorectal cancer	ClinVar	PMID:28492532

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
GANC	Human	(+)-schisandrin B	multiple interactions	ISO	Ganc (Rattus norvegicus)	6480464	schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of GANC mRNA]	CTD	PMID:31150632
GANC	Human	17beta-estradiol	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	Estradiol results in decreased expression of GANC mRNA	CTD	PMID:32145629
GANC	Human	17beta-estradiol	decreases expression	ISO	Ganc (Mus musculus)	6480464	Estradiol results in decreased expression of GANC mRNA	CTD	PMID:39298647
GANC	Human	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Ganc (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of GANC mRNA	CTD	PMID:21570461
GANC	Human	2-palmitoylglycerol	increases expression	EXP		6480464	2-palmitoylglycerol results in increased expression of GANC mRNA	CTD	PMID:37199045
GANC	Human	4,4'-sulfonyldiphenol	decreases expression	ISO	Ganc (Mus musculus)	6480464	bisphenol S results in decreased expression of GANC mRNA	CTD	PMID:39298647
GANC	Human	6-propyl-2-thiouracil	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	Propylthiouracil results in decreased expression of GANC mRNA	CTD	PMID:30047161
GANC	Human	bis(2-ethylhexyl) phthalate	increases expression	ISO	Ganc (Mus musculus)	6480464	Diethylhexyl Phthalate results in increased expression of GANC mRNA	CTD	PMID:34319233
GANC	Human	bisphenol A	affects expression	ISO	Ganc (Rattus norvegicus)	6480464	bisphenol A affects the expression of GANC mRNA	CTD	PMID:25181051
GANC	Human	bisphenol A	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	bisphenol A results in decreased expression of GANC mRNA	CTD	PMID:32145629
GANC	Human	bisphenol F	decreases expression	ISO	Ganc (Mus musculus)	6480464	bisphenol F results in decreased expression of GANC mRNA	CTD	PMID:38685157
GANC	Human	butanal	decreases expression	EXP		6480464	butyraldehyde results in decreased expression of GANC mRNA	CTD	PMID:26079696
GANC	Human	carbon nanotube	decreases expression	ISO	Ganc (Mus musculus)	6480464	Nanotubes and Carbon results in decreased expression of GANC mRNA	CTD	PMID:25554681 and PMID:25620056
GANC	Human	cefaloridine	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	Cephaloridine results in decreased expression of GANC mRNA	CTD	PMID:18500788
GANC	Human	cisplatin	increases expression	EXP		6480464	Cisplatin results in increased expression of GANC mRNA	CTD	PMID:27392435
GANC	Human	clotrimazole	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	Clotrimazole results in decreased expression of GANC mRNA	CTD	PMID:30047161
GANC	Human	cyclosporin A	increases methylation	EXP		6480464	Cyclosporine results in increased methylation of GANC promoter	CTD	PMID:27989131
GANC	Human	decabromodiphenyl ether	increases expression	ISO	Ganc (Rattus norvegicus)	6480464	decabromobiphenyl ether results in increased expression of GANC mRNA	CTD	PMID:23914054
GANC	Human	decabromodiphenyl ether	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	decabromobiphenyl ether results in decreased expression of GANC mRNA	CTD	PMID:23640034
GANC	Human	Dibutyl phosphate	affects expression	EXP		6480464	di-n-butylphosphoric acid affects the expression of GANC mRNA	CTD	PMID:37042841
GANC	Human	doxorubicin	decreases expression	EXP		6480464	Doxorubicin results in decreased expression of GANC mRNA	CTD	PMID:29803840
GANC	Human	gold atom	multiple interactions	ISO	Ganc (Mus musculus)	6480464	[Gold co-treated with Polyethylene Glycols] results in decreased expression of GANC mRNA	CTD	PMID:19695318
GANC	Human	gold(0)	multiple interactions	ISO	Ganc (Mus musculus)	6480464	[Gold co-treated with Polyethylene Glycols] results in decreased expression of GANC mRNA	CTD	PMID:19695318
GANC	Human	indinavir	multiple interactions	ISO	Ganc (Mus musculus)	6480464	[Zidovudine co-treated with Lamivudine co-treated with Indinavir] results in decreased expression of GANC mRNA	CTD	PMID:16931933
GANC	Human	lamivudine	multiple interactions	ISO	Ganc (Mus musculus)	6480464	[Zidovudine co-treated with Lamivudine co-treated with Indinavir] results in decreased expression of GANC mRNA more ...	CTD	PMID:16931933
GANC	Human	methidathion	increases expression	ISO	Ganc (Mus musculus)	6480464	methidathion results in increased expression of GANC mRNA	CTD	PMID:34813904
GANC	Human	methimazole	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	Methimazole results in decreased expression of GANC mRNA	CTD	PMID:30047161
GANC	Human	methyl methanesulfonate	increases expression	EXP		6480464	Methyl Methanesulfonate results in increased expression of GANC mRNA	CTD	PMID:23649840
GANC	Human	phenobarbital	decreases expression	ISO	Ganc (Mus musculus)	6480464	Phenobarbital results in decreased expression of GANC mRNA	CTD	PMID:23091169
GANC	Human	pirinixic acid	increases expression	ISO	Ganc (Mus musculus)	6480464	pirinixic acid results in increased expression of GANC mRNA	CTD	PMID:18301758
GANC	Human	propiconazole	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	propiconazole results in decreased expression of GANC mRNA	CTD	PMID:30047161
GANC	Human	rotenone	increases expression	EXP		6480464	Rotenone results in increased expression of GANC mRNA	CTD	PMID:29955902
GANC	Human	saquinavir	multiple interactions	ISO	Ganc (Mus musculus)	6480464	[Zidovudine co-treated with Lamivudine co-treated with Saquinavir] results in decreased expression of GANC mRNA	CTD	PMID:16931933
GANC	Human	sodium fluoride	decreases expression	ISO	Ganc (Mus musculus)	6480464	Sodium Fluoride results in decreased expression of GANC protein	CTD	PMID:28918527
GANC	Human	sunitinib	increases expression	EXP		6480464	Sunitinib results in increased expression of GANC mRNA	CTD	PMID:31533062
GANC	Human	tetrachloromethane	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	Carbon Tetrachloride results in decreased expression of GANC mRNA	CTD	PMID:31150632
GANC	Human	tetrachloromethane	decreases expression	ISO	Ganc (Mus musculus)	6480464	Carbon Tetrachloride results in decreased expression of GANC mRNA	CTD	PMID:31919559
GANC	Human	tetrachloromethane	multiple interactions	ISO	Ganc (Rattus norvegicus)	6480464	schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of GANC mRNA]	CTD	PMID:31150632
GANC	Human	thioacetamide	decreases expression	ISO	Ganc (Rattus norvegicus)	6480464	Thioacetamide results in decreased expression of GANC mRNA	CTD	PMID:34492290
GANC	Human	thiram	decreases expression	EXP		6480464	Thiram results in decreased expression of GANC mRNA	CTD	PMID:38568856
GANC	Human	titanium dioxide	decreases methylation	ISO	Ganc (Mus musculus)	6480464	titanium dioxide results in decreased methylation of GANC gene	CTD	PMID:35295148
GANC	Human	trichloroethene	increases expression	ISO	Ganc (Rattus norvegicus)	6480464	Trichloroethylene results in increased expression of GANC mRNA	CTD	PMID:33387578
GANC	Human	triphenyl phosphate	affects expression	EXP		6480464	triphenyl phosphate affects the expression of GANC mRNA	CTD	PMID:37042841
GANC	Human	triptonide	increases expression	ISO	Ganc (Mus musculus)	6480464	triptonide results in increased expression of GANC mRNA	CTD	PMID:33045310
GANC	Human	trovafloxacin	decreases expression	ISO	Ganc (Mus musculus)	6480464	trovafloxacin results in decreased expression of GANC mRNA	CTD	PMID:35537566
GANC	Human	valproic acid	affects expression	EXP		6480464	Valproic Acid affects the expression of GANC mRNA	CTD	PMID:25979313
GANC	Human	zidovudine	multiple interactions	ISO	Ganc (Mus musculus)	6480464	[Zidovudine co-treated with Lamivudine co-treated with Indinavir] results in decreased expression of GANC mRNA more ...	CTD	PMID:16931933

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
GANC	Human	carbohydrate metabolic process	involved_in	IEA	InterPro:IPR000322 and InterPro:IPR011013	150520179		InterPro	GO_REF:0000002
GANC	Human	N-glycan processing	involved_in	IBA	MGI:1097667 more ...	150520179		GO_Central	GO_REF:0000033

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
GANC	Human	alpha-1,4-glucosidase activity	enables	NAS		150520179	PMID:12370436	UniProt	PMID:12370436
GANC	Human	alpha-1,4-glucosidase activity	enables	IBA	MGI:1923301 and PANTHER:PTN002734196	150520179		GO_Central	GO_REF:0000033
GANC	Human	alpha-1,4-glucosidase activity	enables	IEA	EC:3.2.1.20	150520179		UniProt	GO_REF:0000003
GANC	Human	alpha-glucosidase activity	enables	IEA	ARBA:ARBA00028201	150520179		UniProt	GO_REF:0000117
GANC	Human	carbohydrate binding	enables	IEA	InterPro:IPR011013	150520179		InterPro	GO_REF:0000002
GANC	Human	catalytic activity	enables	IEA	InterPro:IPR011013	150520179		InterPro	GO_REF:0000002
GANC	Human	hydrolase activity	enables	IEA	UniProtKB-KW:KW-0378	150520179		UniProt	GO_REF:0000043
GANC	Human	hydrolase activity, acting on glycosyl bonds	enables	IEA	UniProtKB-KW:KW-0326	150520179		UniProt	GO_REF:0000043
GANC	Human	hydrolase activity, hydrolyzing O-glycosyl compounds	enables	IEA	InterPro:IPR000322	150520179		InterPro	GO_REF:0000002

Imported Annotations - KEGG (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
GANC	Human	galactose metabolic pathway		IEA		6907045		KEGG	hsa:00052
GANC	Human	starch and sucrose metabolic pathway		IEA		6907045		KEGG	hsa:00500

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	Computer assisted cloning of human neutral alpha-glucosidase C (GANC): a new paralog in the glycosyl hydrolase gene family 31.	Hirschhorn R, etal., Proc Natl Acad Sci U S A 2002 Oct 15;99(21):13642-6. Epub 2002 Oct 7.
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:1352226	PMID:1678778	PMID:1704656	PMID:1736542	PMID:2076345	PMID:2136376	PMID:2187500	PMID:2283726	PMID:2355006	PMID:2541446	PMID:2542563	PMID:2649653
PMID:2825177	PMID:2829950	PMID:2959866	PMID:3099781	PMID:3135493	PMID:3264072	PMID:6362728	PMID:6369775	PMID:6994494	PMID:6995030	PMID:7030525	PMID:8093218
PMID:8218172	PMID:8416962	PMID:8673525	PMID:8794361	PMID:8794362	PMID:9109416	PMID:11076863	PMID:11530211	PMID:11752220	PMID:12434312	PMID:12477932	PMID:12560567
PMID:12719582	PMID:14675785	PMID:14702039	PMID:15489334	PMID:15489336	PMID:16381901	PMID:16547752	PMID:18215327	PMID:18314154	PMID:18330979	PMID:19588081	PMID:20800603
PMID:21873635	PMID:22082156	PMID:26496610	PMID:26610429	PMID:29282757	PMID:33961781	PMID:35831314	PMID:38334954

GANC
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	42,273,201 - 42,353,666 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	42,273,201 - 42,353,666 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	42,565,399 - 42,645,864 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	40,353,658 - 40,433,156 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	40,353,785 - 40,432,359	NCBI
Celera	15	19,334,065 - 19,413,574 (+)	NCBI		Celera
Cytogenetic Map	15	q15.1	NCBI
HuRef	15	19,414,521 - 19,494,038 (+)	NCBI		HuRef
CHM1_1	15	42,684,852 - 42,764,352 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	40,079,234 - 40,159,701 (+)	NCBI		T2T-CHM13v2.0

Ganc
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	120,234,377 - 120,291,347 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	120,234,377 - 120,292,181 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	120,403,896 - 120,460,866 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	120,403,896 - 120,461,700 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	120,229,632 - 120,286,602 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	120,229,632 - 120,286,602 (+)	NCBI		MGSCv36	mm8
Celera	2	121,558,392 - 121,615,221 (+)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	60.31	NCBI

Ganc
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	127,807,132 - 127,858,995 (+)	NCBI		GRCr8
mRatBN7.2	3	107,353,369 - 107,406,104 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	107,353,369 - 107,405,241 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	111,028,306 - 111,080,046 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	119,623,870 - 119,675,614 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	117,284,251 - 117,336,001 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	112,173,907 - 112,226,886 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	112,173,907 - 112,226,023 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	118,721,646 - 118,774,625 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	106,892,422 - 106,944,283 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	106,261,571 - 106,313,280 (+)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

Ganc
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	8,990,852 - 9,063,826 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	8,990,852 - 9,063,840 (+)	NCBI	ChiLan1.0	ChiLan1.0

GANC
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	9,253,731 - 9,329,070 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	9,254,274 - 9,319,407 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	9,311,726 - 9,387,168 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	9,388,647 - 9,464,059 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	9,388,917 - 9,455,817 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	9,308,601 - 9,384,048 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	9,414,007 - 9,489,378 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	9,547,944 - 9,623,229 (+)	NCBI		UU_Cfam_GSD_1.0

Ganc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	87,729,872 - 87,811,852 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	5,577,657 - 5,662,659 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	5,578,248 - 5,659,917 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GANC
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	129,021,115 - 129,098,269 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	129,021,114 - 129,098,313 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	143,913,341 - 143,990,702 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GANC
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	40,670,906 - 40,721,381 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666048	100,280,854 - 100,382,096 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ganc
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624804	9,400,897 - 9,467,910 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624804	9,400,905 - 9,472,896 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in GANC
74 total Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 15q15.1(chr15:41865122-42329484)x3	copy number gain	See cases [RCV000051140]	Chr15:41865122..42329484 [GRCh38] Chr15:42157320..42621682 [GRCh37] Chr15:39944612..40408974 [NCBI36] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2478G>C (p.Gln826His)	single nucleotide variant	not specified [RCV004264399]	Chr15:42349442 [GRCh38] Chr15:42641640 [GRCh37] Chr15:15q15.1	uncertain significance
GRCh38/hg38 15q15.1(chr15:41697762-42489559)x3	copy number gain	See cases [RCV000140056]	Chr15:41697762..42489559 [GRCh38] Chr15:41989960..42781757 [GRCh37] Chr15:39777252..40569049 [NCBI36] Chr15:15q15.1	uncertain significance
GRCh37/hg19 15q15.1-26.3(chr15:41745084-102354798)x4	copy number gain	See cases [RCV000447123]	Chr15:41745084..102354798 [GRCh37] Chr15:15q15.1-26.3	pathogenic
GRCh37/hg19 15q11.2-26.3(chr15:20733395-102511616)x4	copy number gain	See cases [RCV000447765]	Chr15:20733395..102511616 [GRCh37] Chr15:15q11.2-26.3	pathogenic
GRCh37/hg19 15q15.1-21.2(chr15:41689327-52446981)x1	copy number loss	See cases [RCV000448968]	Chr15:41689327..52446981 [GRCh37] Chr15:15q15.1-21.2	pathogenic
GRCh37/hg19 15q11.2-26.3(chr15:22770422-102429112)x3	copy number gain	See cases [RCV000510717]	Chr15:22770422..102429112 [GRCh37] Chr15:15q11.2-26.3	pathogenic
GRCh37/hg19 15q11.2-26.3(chr15:22770422-102429112)	copy number gain	See cases [RCV000512019]	Chr15:22770422..102429112 [GRCh37] Chr15:15q11.2-26.3	pathogenic
Single allele	duplication	not provided [RCV000677926]	Chr15:31115047..102354857 [GRCh37] Chr15:15q13.2-26.3	pathogenic
NM_198141.3(GANC):c.1403A>T (p.Glu468Val)	single nucleotide variant	not specified [RCV004308479]	Chr15:42326407 [GRCh38] Chr15:42618605 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2195C>T (p.Thr732Ile)	single nucleotide variant	not specified [RCV004296301]	Chr15:42343120 [GRCh38] Chr15:42635318 [GRCh37] Chr15:15q15.1	uncertain significance
GRCh37/hg19 15q15.1(chr15:42631252-42703371)x1	copy number loss	not provided [RCV000683685]	Chr15:42631252..42703371 [GRCh37] Chr15:15q15.1	likely benign
GRCh37/hg19 15q11.1-26.3(chr15:20016811-102493540)x3	copy number gain	not provided [RCV000751155]	Chr15:20016811..102493540 [GRCh37] Chr15:15q11.1-26.3	pathogenic
GRCh37/hg19 15q11.1-26.3(chr15:20071673-102461162)x3	copy number gain	not provided [RCV000751156]	Chr15:20071673..102461162 [GRCh37] Chr15:15q11.1-26.3	pathogenic
NM_198141.3(GANC):c.496A>G (p.Ile166Val)	single nucleotide variant	not provided [RCV000948952]	Chr15:42292901 [GRCh38] Chr15:42585099 [GRCh37] Chr15:15q15.1	benign
NM_198141.3(GANC):c.262G>A (p.Glu88Lys)	single nucleotide variant	not provided [RCV000955490]	Chr15:42287751 [GRCh38] Chr15:42579949 [GRCh37] Chr15:15q15.1	benign
NM_198141.3(GANC):c.1741+7A>G	single nucleotide variant	not provided [RCV000935275]	Chr15:42330679 [GRCh38] Chr15:42622877 [GRCh37] Chr15:15q15.1	likely benign
NC_000015.9:g.(?_32964879)_(91358519_?)dup	duplication	Bloom syndrome [RCV001343104]\|Familial colorectal cancer [RCV001325176]	Chr15:32964879..91358519 [GRCh37] Chr15:15q13.3-26.1	uncertain significance
NM_198141.3(GANC):c.2443C>T (p.Leu815Phe)	single nucleotide variant	not specified [RCV004298944]	Chr15:42349407 [GRCh38] Chr15:42641605 [GRCh37] Chr15:15q15.1	uncertain significance
GRCh37/hg19 15q15.1(chr15:42631229-42703371)	copy number loss	not specified [RCV002052465]	Chr15:42631229..42703371 [GRCh37] Chr15:15q15.1	uncertain significance
NC_000015.9:g.(?_42614560)_(42676697_?)del	deletion	Autosomal recessive limb-girdle muscular dystrophy type 2A [RCV003119246]	Chr15:42614560..42676697 [GRCh37] Chr15:15q15.1	likely pathogenic
NM_198141.3(GANC):c.2374A>G (p.Met792Val)	single nucleotide variant	not specified [RCV004299122]	Chr15:42348172 [GRCh38] Chr15:42640370 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1657G>A (p.Ala553Thr)	single nucleotide variant	not specified [RCV004111815]	Chr15:42330588 [GRCh38] Chr15:42622786 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1616A>C (p.Glu539Ala)	single nucleotide variant	not specified [RCV004247014]	Chr15:42329421 [GRCh38] Chr15:42621619 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1289G>A (p.Arg430His)	single nucleotide variant	not specified [RCV004208557]	Chr15:42322016 [GRCh38] Chr15:42614214 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2734C>T (p.Arg912Cys)	single nucleotide variant	not specified [RCV004192028]	Chr15:42352128 [GRCh38] Chr15:42644326 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2497A>C (p.Lys833Gln)	single nucleotide variant	not specified [RCV004240421]	Chr15:42349461 [GRCh38] Chr15:42641659 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.411C>A (p.Asn137Lys)	single nucleotide variant	not specified [RCV004106166]	Chr15:42292816 [GRCh38] Chr15:42585014 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.224A>G (p.Tyr75Cys)	single nucleotide variant	not specified [RCV004237275]	Chr15:42287713 [GRCh38] Chr15:42579911 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2420G>C (p.Gly807Ala)	single nucleotide variant	not specified [RCV004114896]	Chr15:42349384 [GRCh38] Chr15:42641582 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.386A>G (p.Asp129Gly)	single nucleotide variant	not specified [RCV004174411]	Chr15:42292791 [GRCh38] Chr15:42584989 [GRCh37] Chr15:15q15.1	likely benign
NM_198141.3(GANC):c.136T>G (p.Leu46Val)	single nucleotide variant	not specified [RCV004120803]	Chr15:42278525 [GRCh38] Chr15:42570723 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.95G>A (p.Arg32His)	single nucleotide variant	not specified [RCV004120850]	Chr15:42278484 [GRCh38] Chr15:42570682 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1795A>G (p.Ile599Val)	single nucleotide variant	not specified [RCV004183990]	Chr15:42338442 [GRCh38] Chr15:42630640 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2436G>C (p.Glu812Asp)	single nucleotide variant	not specified [RCV004109286]	Chr15:42349400 [GRCh38] Chr15:42641598 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2330G>A (p.Ser777Asn)	single nucleotide variant	not specified [RCV004198227]	Chr15:42348128 [GRCh38] Chr15:42640326 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1892G>A (p.Arg631His)	single nucleotide variant	not specified [RCV004226166]	Chr15:42339717 [GRCh38] Chr15:42631915 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.692A>G (p.His231Arg)	single nucleotide variant	not specified [RCV004212565]	Chr15:42308288 [GRCh38] Chr15:42600486 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1539T>A (p.Asn513Lys)	single nucleotide variant	not specified [RCV004118473]	Chr15:42329344 [GRCh38] Chr15:42621542 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1601A>T (p.Asn534Ile)	single nucleotide variant	not specified [RCV004176330]	Chr15:42329406 [GRCh38] Chr15:42621604 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1456G>A (p.Val486Ile)	single nucleotide variant	not specified [RCV004261684]	Chr15:42327398 [GRCh38] Chr15:42619596 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1175A>T (p.Tyr392Phe)	single nucleotide variant	not specified [RCV004262138]	Chr15:42321902 [GRCh38] Chr15:42614100 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.257T>C (p.Ile86Thr)	single nucleotide variant	not specified [RCV004307080]	Chr15:42287746 [GRCh38] Chr15:42579944 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.761A>G (p.Tyr254Cys)	single nucleotide variant	not specified [RCV004267859]	Chr15:42310321 [GRCh38] Chr15:42602519 [GRCh37] Chr15:15q15.1	uncertain significance
GRCh38/hg38 15q15.1(chr15:42349336-42378932)x1	copy number loss	Autosomal recessive limb-girdle muscular dystrophy type 2A [RCV003327660]	Chr15:42349336..42378932 [GRCh38] Chr15:15q15.1	pathogenic
NM_198141.3(GANC):c.2701C>T (p.Leu901Phe)	single nucleotide variant	not specified [RCV004335435]	Chr15:42352095 [GRCh38] Chr15:42644293 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.400A>C (p.Ile134Leu)	single nucleotide variant	not specified [RCV004361415]	Chr15:42292805 [GRCh38] Chr15:42585003 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1968G>C (p.Trp656Cys)	single nucleotide variant	not specified [RCV004343392]	Chr15:42339793 [GRCh38] Chr15:42631991 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.775T>C (p.Tyr259His)	single nucleotide variant	not specified [RCV004342581]	Chr15:42310335 [GRCh38] Chr15:42602533 [GRCh37] Chr15:15q15.1	likely benign
NM_015497.5(TMEM87A):c.101T>C (p.Val34Ala)	single nucleotide variant	not specified [RCV004354493]	Chr15:42273298 [GRCh38] Chr15:42565496 [GRCh37] Chr15:15q15.1	uncertain significance
GRCh37/hg19 15q15.1-15.2(chr15:42629809-43042062)x3	copy number gain	not provided [RCV003485064]	Chr15:42629809..43042062 [GRCh37] Chr15:15q15.1-15.2	uncertain significance
Single allele	deletion	not provided [RCV003448697]	Chr15:41321409..51718601 [GRCh37] Chr15:15q15.1-21.2	pathogenic
GRCh37/hg19 15q11.2-21.2(chr15:22770421-50347130)x3	copy number gain	not specified [RCV003987108]	Chr15:22770421..50347130 [GRCh37] Chr15:15q11.2-21.2	pathogenic
GRCh37/hg19 15q15.1(chr15:42631673-42700221)x1	copy number loss	not specified [RCV003987123]	Chr15:42631673..42700221 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1940C>A (p.Thr647Asn)	single nucleotide variant	not specified [RCV004392681]	Chr15:42339765 [GRCh38] Chr15:42631963 [GRCh37] Chr15:15q15.1	uncertain significance
NM_015497.5(TMEM87A):c.58C>T (p.His20Tyr)	single nucleotide variant	not specified [RCV004470518]	Chr15:42273341 [GRCh38] Chr15:42565539 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.920T>C (p.Met307Thr)	single nucleotide variant	not specified [RCV004392688]	Chr15:42310709 [GRCh38] Chr15:42602907 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1273C>A (p.Leu425Ile)	single nucleotide variant	not specified [RCV004392680]	Chr15:42322000 [GRCh38] Chr15:42614198 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.786G>A (p.Met262Ile)	single nucleotide variant	not specified [RCV004392687]	Chr15:42310346 [GRCh38] Chr15:42602544 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2132T>C (p.Met711Thr)	single nucleotide variant	not specified [RCV004392684]	Chr15:42340734 [GRCh38] Chr15:42632932 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2215C>T (p.Pro739Ser)	single nucleotide variant	not specified [RCV004392685]	Chr15:42343140 [GRCh38] Chr15:42635338 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2017C>T (p.Arg673Cys)	single nucleotide variant	not specified [RCV004392683]	Chr15:42339842 [GRCh38] Chr15:42632040 [GRCh37] Chr15:15q15.1	uncertain significance
NM_015497.5(TMEM87A):c.62C>T (p.Pro21Leu)	single nucleotide variant	not specified [RCV004679836]	Chr15:42273337 [GRCh38] Chr15:42565535 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2285T>C (p.Ile762Thr)	single nucleotide variant	not specified [RCV004634448]	Chr15:42345813 [GRCh38] Chr15:42638011 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2398C>T (p.Arg800Trp)	single nucleotide variant	not specified [RCV004623811]	Chr15:42348196 [GRCh38] Chr15:42640394 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2324G>T (p.Gly775Val)	single nucleotide variant	not specified [RCV004634451]	Chr15:42348122 [GRCh38] Chr15:42640320 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.898G>A (p.Val300Ile)	single nucleotide variant	not specified [RCV004634450]	Chr15:42310458 [GRCh38] Chr15:42602656 [GRCh37] Chr15:15q15.1	uncertain significance
NM_015497.5(TMEM87A):c.67C>T (p.Pro23Ser)	single nucleotide variant	not specified [RCV004679835]	Chr15:42273332 [GRCh38] Chr15:42565530 [GRCh37] Chr15:15q15.1	uncertain significance
NM_015497.5(TMEM87A):c.97A>G (p.Thr33Ala)	single nucleotide variant	not specified [RCV004686954]	Chr15:42273302 [GRCh38] Chr15:42565500 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.266A>G (p.Glu89Gly)	single nucleotide variant	not specified [RCV004634449]	Chr15:42287755 [GRCh38] Chr15:42579953 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1676G>C (p.Arg559Pro)	single nucleotide variant	not specified [RCV004924332]	Chr15:42330607 [GRCh38] Chr15:42622805 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.451A>T (p.Ile151Phe)	single nucleotide variant	not specified [RCV004924333]	Chr15:42292856 [GRCh38] Chr15:42585054 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.992T>C (p.Ile331Thr)	single nucleotide variant	not specified [RCV004924334]	Chr15:42310781 [GRCh38] Chr15:42602979 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2249C>T (p.Thr750Ile)	single nucleotide variant	not specified [RCV004924339]	Chr15:42345777 [GRCh38] Chr15:42637975 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1976G>C (p.Gly659Ala)	single nucleotide variant	not specified [RCV004924341]	Chr15:42339801 [GRCh38] Chr15:42631999 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.467T>C (p.Leu156Pro)	single nucleotide variant	not specified [RCV004924330]	Chr15:42292872 [GRCh38] Chr15:42585070 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1105C>T (p.Arg369Cys)	single nucleotide variant	not specified [RCV004924331]	Chr15:42321832 [GRCh38] Chr15:42614030 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1817G>C (p.Ser606Thr)	single nucleotide variant	not specified [RCV004924335]	Chr15:42338464 [GRCh38] Chr15:42630662 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1876A>G (p.Thr626Ala)	single nucleotide variant	not specified [RCV004924337]	Chr15:42339701 [GRCh38] Chr15:42631899 [GRCh37] Chr15:15q15.1	likely benign
NM_198141.3(GANC):c.1978G>A (p.Glu660Lys)	single nucleotide variant	not specified [RCV004924338]	Chr15:42339803 [GRCh38] Chr15:42632001 [GRCh37] Chr15:15q15.1	likely benign
NM_198141.3(GANC):c.2369G>T (p.Gly790Val)	single nucleotide variant	not specified [RCV004924340]	Chr15:42348167 [GRCh38] Chr15:42640365 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2683A>G (p.Ile895Val)	single nucleotide variant	not specified [RCV004930544]	Chr15:42352077 [GRCh38] Chr15:42644275 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.1325T>C (p.Ile442Thr)	single nucleotide variant	not specified [RCV004930545]	Chr15:42326329 [GRCh38] Chr15:42618527 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2308C>T (p.Pro770Ser)	single nucleotide variant	not specified [RCV004930546]	Chr15:42348106 [GRCh38] Chr15:42640304 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2120A>G (p.Lys707Arg)	single nucleotide variant	not specified [RCV004930547]	Chr15:42340722 [GRCh38] Chr15:42632920 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.398A>G (p.His133Arg)	single nucleotide variant	not specified [RCV004930548]	Chr15:42292803 [GRCh38] Chr15:42585001 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.754G>C (p.Asp252His)	single nucleotide variant	not specified [RCV004930549]	Chr15:42310314 [GRCh38] Chr15:42602512 [GRCh37] Chr15:15q15.1	uncertain significance
NM_198141.3(GANC):c.2191G>A (p.Ala731Thr)	single nucleotide variant	not specified [RCV004930550]	Chr15:42343116 [GRCh38] Chr15:42635314 [GRCh37] Chr15:15q15.1	uncertain significance
NM_015497.5(TMEM87A):c.110C>T (p.Ala37Val)	single nucleotide variant	not specified [RCV004880366]	Chr15:42273289 [GRCh38] Chr15:42565487 [GRCh37] Chr15:15q15.1	uncertain significance

Predicted Target Of

	Summary Value
Count of predictions:	2547
Count of miRNA genes:	1101
Interacting mature miRNAs:	1339
Transcripts:	ENST00000318010, ENST00000440615, ENST00000561871, ENST00000562170, ENST00000562859, ENST00000566442, ENST00000566690, ENST00000567421, ENST00000567596, ENST00000567784, ENST00000568687, ENST00000568953, ENST00000570013
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2289410	BW327_H	Body weight QTL 327 (human)	3.32	0.0001	Body fat amount		15	19980129	45980129	Human
1643273	BW330_H	Body Weight QTL 330 (human)	1.05	0.014	Body weight	body mass index	15	26866719	52866719	Human
2289430	BMD7_H	Bone mineral density QTL 7 (human)	3.32	0.0001	Bone mineral density		15	19980129	45980129	Human
1559411	SCL107_H	Serum cholesterol level QTL 107 (human)	3.88		Lipid level	triglyceride	15	26543552	52543552	Human
2299958	PRSTS330_H	Prostate tumor susceptibility QTL 330 (human)	1.02	0.0151	Prostate tumor susceptibility		15	34790230	60790230	Human
597043200	GWAS1139274_H	hemoglobin measurement QTL GWAS1139274 (human)		8e-09	hemoglobin measurement	hemoglobin measurement (CMO:0000508)	15	42326333	42326334	Human
1643523	BW284_H	Body Weight QTL 284 (human)	1.95	0.0013	Body weight		15	21792889	47792889	Human
1559354	LDLPS4_H	Low density lipoprotein particle size QTL 4 (human)	2.2	0.019	LDL particle size		15	34790230	60790230	Human
2289420	BW314_H	Body weight QTL 314 (human)	2.72	0.0003	Body weight	lean mass	15	19980129	45980129	Human
597318213	GWAS1414287_H	X-07765 measurement QTL GWAS1414287 (human)		0.000006	X-07765 measurement		15	42280791	42280792	Human
597057401	GWAS1153475_H	basophil count QTL GWAS1153475 (human)		6e-13	basophil quantity (VT:0002607)	blood basophil count (CMO:0000034)	15	42294574	42294575	Human

RH48768

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	15	42,621,542 - 42,621,695	UniSTS	GRCh37
Build 36	15	40,408,834 - 40,408,987	RGD	NCBI36
Celera	15	19,389,252 - 19,389,405	RGD
Cytogenetic Map	15	q15.2	UniSTS
HuRef	15	19,469,709 - 19,469,862	UniSTS
GeneMap99-GB4 RH Map	15	149.59	UniSTS
NCBI RH Map	15	109.4	UniSTS

WI-17962

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	15	42,644,806 - 42,644,932	UniSTS	GRCh37
Build 36	15	40,432,098 - 40,432,224	RGD	NCBI36
Celera	15	19,412,516 - 19,412,642	RGD
Cytogenetic Map	15	q15.2	UniSTS
Cytogenetic Map	15	q15.1	UniSTS
HuRef	15	19,492,980 - 19,493,106	UniSTS
GeneMap99-GB4 RH Map	15	150.24	UniSTS
Whitehead-RH Map	15	106.7	UniSTS

RH39468

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	15	42,576,200 - 42,576,325	UniSTS	GRCh37
Build 36	15	40,363,492 - 40,363,617	RGD	NCBI36
Celera	15	19,343,896 - 19,344,021	RGD
Cytogenetic Map	15	q15.2	UniSTS

D15S744

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	15	42,630,475 - 42,630,583	UniSTS	GRCh37
Build 36	15	40,417,767 - 40,417,875	RGD	NCBI36
Celera	15	19,398,185 - 19,398,293	RGD
Cytogenetic Map	15	q15.2	UniSTS
HuRef	15	19,478,642 - 19,478,750	UniSTS

D15S763

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	15	42,616,081 - 42,616,184	UniSTS	GRCh37
Build 36	15	40,403,373 - 40,403,476	RGD	NCBI36
Celera	15	19,383,791 - 19,383,894	RGD
Cytogenetic Map	15	q15.2	UniSTS
HuRef	15	19,464,248 - 19,464,351	UniSTS

D15S764

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	15	42,583,491 - 42,583,607	UniSTS	GRCh37
Build 36	15	40,370,783 - 40,370,899	RGD	NCBI36
Celera	15	19,351,187 - 19,351,303	RGD
Cytogenetic Map	15	q15.2	UniSTS
HuRef	15	19,431,643 - 19,431,759	UniSTS

AFM196xb8

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	15	42,631,476 - 42,631,707	UniSTS	GRCh37
Build 36	15	40,418,768 - 40,418,999	RGD	NCBI36
Celera	15	19,399,186 - 19,399,417	RGD
Cytogenetic Map	15	q15.2	UniSTS
HuRef	15	19,479,638 - 19,479,869	UniSTS
Whitehead-RH Map	15	106.5	UniSTS
Whitehead-YAC Contig Map	15		UniSTS
NCBI RH Map	15	118.3	UniSTS

RH68453

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	15	42,577,449 - 42,577,579	UniSTS	GRCh37
Build 36	15	40,364,741 - 40,364,871	RGD	NCBI36
Celera	15	19,345,145 - 19,345,275	RGD
Cytogenetic Map	15	q15.2	UniSTS
HuRef	15	19,425,601 - 19,425,731	UniSTS
GeneMap99-GB4 RH Map	15	146.74	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system
1204	2435	2788	2247	4950	1725	2349	4	622	1951	464	2269	7289	6460	53	3713	849	1736	1616	172


RefSeq Transcripts	NM_001301409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001301410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001393928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001393929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001393930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001393931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001393932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001393933	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_198141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_172055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC012651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC022468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF525397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF545045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF545046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK074037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK074330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK301467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC059406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC093833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC112051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE893238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM999150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ000944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068263	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HY309614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000318010 ⟹ ENSP00000326227

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,273,201 - 42,353,666 (+)	Ensembl

Ensembl Acc Id:

ENST00000440615 ⟹ ENSP00000399557

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,274,242 - 42,284,389 (+)	Ensembl

Ensembl Acc Id:

ENST00000561871 ⟹ ENSP00000454816

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,273,233 - 42,274,510 (+)	Ensembl

Ensembl Acc Id:

ENST00000562170 ⟹ ENSP00000454578

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,273,286 - 42,278,592 (+)	Ensembl

Ensembl Acc Id:

ENST00000562859 ⟹ ENSP00000454449

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,273,295 - 42,292,826 (+)	Ensembl

Ensembl Acc Id:

ENST00000566442 ⟹ ENSP00000454747

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,273,658 - 42,314,833 (+)	Ensembl

Ensembl Acc Id:

ENST00000566690

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,344,695 - 42,352,078 (+)	Ensembl

Ensembl Acc Id:

ENST00000567421

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,276,346 - 42,327,495 (+)	Ensembl

Ensembl Acc Id:

ENST00000567596

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,343,342 - 42,352,108 (+)	Ensembl

Ensembl Acc Id:

ENST00000567784 ⟹ ENSP00000455872

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,274,244 - 42,287,722 (+)	Ensembl

Ensembl Acc Id:

ENST00000568687

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,276,272 - 42,281,112 (+)	Ensembl

Ensembl Acc Id:

ENST00000568953

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,326,301 - 42,329,504 (+)	Ensembl

Ensembl Acc Id:

ENST00000570013 ⟹ ENSP00000456360

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	42,274,264 - 42,283,902 (+)	Ensembl

RefSeq Acc Id:

NM_001301409 ⟹ NP_001288338

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,487 - 42,314,816 (+)	NCBI
CHM1_1	15	42,684,342 - 42,725,516 (+)	NCBI
T2T-CHM13v2.0	15	40,079,520 - 40,120,850 (+)	NCBI

Sequence:

show sequence

ATCCGGGTCCTGGAAACGTCGCGGAGCTTGTTTGCTGTGCGGCGTAGCGGCCCCTCTCTCAGACAGTCGTCTGTGCGCCGTGAGACTTTGGACCTACTGCGCAGGCGTCATCCTGTTGGAACCTGGTC
AGCTGGGTTAGAGAGATCGCTACATGCCAGCCTGGCCTGAGTCTTTTCTGTCTCCCAGCCGTTAAAGGTTTTAGGACCAGGCAGGCACCCCGTGCAGGATTTGGCTCTCTACTTCCGCTCGCCCCAGC
CCTTCATCCCTTCTAAGTCAATGTCAGACTTTGGGGCCAGAAAGTCTGGAAAAGCCCTAAGCCTGGCTGCCCAAGTGGCGTCTAGTAGTGAGTTCTCCGGTTTGGGTGGTATTTAAGCAAAGGCTGGA
ATTCGGCGGTGGTGGAGTACACGCGATTCCTAGACTGGGTAGTGTAACAACCTTCAAAGGCCCCTTCTAGCCCTGAAGAGTACGATGCTGCAGTACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGA
CCCGGCCGGCACTTCCCACCCTTAACCGAAAACGGAGACAGAGAGGGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAA
GACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGA
AGTACTGGTTGTAATTTTAGAAAGACACCCAATCGGCTTTTTTAAAAGATCGCCCAGGGCCCTTGTCCTGAGAGCTGGGAGCTGGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAA
ATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTCAGAGACTGTAACAAGATCGCATTTTACAGGCGTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAGTCAC
AACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCTCCTGGCTGAAATTTATGGTATAGAAGGAAACATTTTCAGGCTTAAAATTAATGAAGAGACTCCTCTAAAAC
CCAGATTTGAAGTTCCGGATGTCCTCACAAGCAAGCCAAGCACTGTAAGGCTGATTTCATGCTCTGGGGACACAGGCAGTCTGATATTGGCAGATGGAAAAGGAGACCTGAAGTGCCATATCACAGCA
AACCCATTCAAGGTAGACTTGGTGTCTGAAGAAGAGGTTGTGATTAGCATAAATTCCCTGGGCCAATTATACTTTGAGCATCTACAGATTCTTCACAAACAAAGAGCTGCTAAAGAAAATGAGGAGGA
GACATCAGTGGACACCTCTCAGGAAAATCAAGAAGATCTGGGCCTGTGGGAAGAGAAATTTGGAAAATTTGTGGATATCAAAGCTAATGGCCCTTCTTCTATTGGTTTGGATTTCTCCTTGCATGGAT
TTGAGCATCTTTATGGGATCCCACAACATGCAGAATCACACCAACTTAAAAATACTGGTGATGGAGATGCTTACCGTCTTTATAACCTGGATGTCTATGGATACCAAATATATGATAAAATGGGCATT
TATGGTTCAGTACCTTATCTCCTGGCCCACAAACTGGGCAGAACTATAGGTATTTTCTGGCTGAATGCCTCGGAAACACTGGTGGAGATCAATACAGAGCCTGCAGTAGAGTACACACTGACCCAGAT
GGGCCCAGTTGCTGCTAAACAAAAGGTCAGATCTCGCACTCATGTGCACTGGATGTCAGAGAGTGGCATCATTGATGTTTTTCTGCTGACAGGACCTACACCTTCTGATGTCTTCAAACAGTACTCAC
ACCTTACAGACATTGGAGAAAAATAGCTCTCAGTCTGAGGAAGATACTGAGAAAAGGAAAGAAGTTGAAAGCATCTTGAAGAAAAATTCAGATTGGATATGGGATTGGACAAGTTGGCCAGAAAATAT
TCCCCACAAGGAGTTCCTCTTTAAAGCACCTGAAGCACGTAGCTACCCAGCATGGAATTTAAAGCCTGATGAGGAAAGGGGGCATTTTCTCAGCAGAATTTCCAAAGGGTTTTGCTGCTGTCTCATCT
GGTGGCCATGGGATTGGGGATCTATATTGGAAGGCATCTGACAACTTCTACCAGCACCTTTTGATGAATAATTTGAATCCAGCTTTGTGCGTATAGTGGGGATTTCTATCTGAGCTTGTGACACAGCT
AACTCAGGAGCTGTTATGGTCCTTGGGTGGCTGTTTCACTTGTTTTTATTTGTTCTGTAAATACTGCTTTCCTAATTTAGTAAAATGAAAGAATAGACACTAAAATCACACTGACCTATACTTATACC
TATAGAATCAGTTAATAAGGGTATCAGACTGATTAATATCTACTGTAACAATTTGGCAGTGAGTTTTCTTTGGATATTAGTATAAATATGTAAGTATCGTTTTAATATATTAGTCATGATATAGCATT
TTAAAAATTATCTGTAACCTGAATTCTGTTAAAACACTTTATATTCCAAAAGAATGAATGACAGTGATATTAAAATCACTACATTAAAGGGTTTGCCCAGAATAAA

hide sequence

RefSeq Acc Id:

NM_001301410 ⟹ NP_001288339

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,201 - 42,284,421 (+)	NCBI
CHM1_1	15	42,684,852 - 42,695,105 (+)	NCBI
T2T-CHM13v2.0	15	40,079,234 - 40,090,451 (+)	NCBI

Sequence:

show sequence

GTAGCCCCACCCCTTGCTCCTCTAGGTTCAGACGTTAGTGAAGTGAATACTCACCGACGGTATCGGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACA
GTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGACTCATTGCGT
ACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTTTGGGCCTGAAAAATTCCAG
GAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGAAGTACTGGTTGTAATTTTAGAAAGACACCCAATCGGCTTTTTTAAAAGATCGCCCAGG
GCCCTTGTCCTGAGAGCTGGGAGCTGGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAAATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTCAGAGACTGTAACAAGATCG
CATTTTACAGGCGTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTCAGGTGC
CAGGACCAGAGCCCAACAACTCTGGATGCCTTCAAAGGCAAAGAAACCACAGTCCAGGAGGAGACACAGGATCTCAGCACAAGACAGCACCTGGCTCAAAAGGAAGCTGAGGAGCCTGATAAACAAGG
ACAAATTACCTGGGACATCAGCAACGTAGCTCCCAAGACTGAGAACTTTGAGGACCTCTTGGAACAAACTCCATGCTCAGCCTGTTTGCAAGGTTTCACCAGAGACAACACTTCCAGCAGCTTCTCCG
AGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTGCCTCTTCATCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATAAGGCACAACTACCGCTTATTA
GCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAGCACACCTGGACAGGCCAGTTGTCCTTGGGGAACAGGCCAGTGCCCAGCGTGAGGTTGC
CAGTATTCTTTGTAGAAAATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGTAGAAGGGACAATTAGTGTCCTACAGCAATTTAATGAACTATTAGACCATCCTCTGGATCCCGGGAGGTCTTGAT
CACAGCTGGTAGAGGTGGCCACTCACTGTTCTATGTCTTTTAGGTTAACAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAGGAAGAGTTGATGGAGTC
ATAATTTTCCTACTTAACACCCACTGCAAATTTAAATATGTGTTCTAGGGCTGTTTGTTAATTCTATTATGGTCTTTACTAATTGTGATTCCCAGTTCTGGGTGAATAAAAAGTTTTTGTTTTAATGT
AATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTTACAAAATATCTGGTATTTTCGCCTATATGGCCATTAAAAAAACTAGATTTGTGGATAACAAA

hide sequence

RefSeq Acc Id:

NM_001393928 ⟹ NP_001380857

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,201 - 42,353,666 (+)	NCBI
T2T-CHM13v2.0	15	40,079,234 - 40,159,701 (+)	NCBI

Sequence:

show sequence

GTAGCCCCACCCCTTGCTCCTCTAGGTTCAGACGTTAGTGAAGTGAATACTCACCGACGGTATCGGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACA
GTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGACTCATTGCGT
ACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTTTGGGCCTGAAAAATTCCAG
GAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGAAGTACTGGTTGTAATTTTAGAAAGACACCCAATCGGCTTTTTTAAAAGATCGCCCAGG
GCCCTTGTCCTGAGAGCTGGGAGCTGGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAAATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTCAGAGACTGTAACAAGATCG
CATTTTACAGGCGTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTTCCTCTC
CTGGCTGAAATTTATGGTATAGAAGGAAACATTTTCAGGCTTAAAATTAATGAAGAGACTCCTCTAAAACCCAGATTTGAAGTTCCGGATGTCCTCACAAGCAAGCCAAGCACTGTAAGGCTGATTTC
ATGCTCTGGGGACACAGGCAGTCTGATATTGGCAGATGGAAAAGGAGACCTGAAGTGCCATATCACAGCAAACCCATTCAAGGTAGACTTGGTGTCTGAAGAAGAGGTTGTGATTAGCATAAATTCCC
TGGGCCAATTATACTTTGAGCATCTACAGATTCTTCACAAACAAAGAGCTGCTAAAGAAAATGAGGAGGAGACATCAGTGGACACCTCTCAGGAAAATCAAGAAGATCTGGGCCTGTGGGAAGAGAAA
TTTGGAAAATTTGTGGATATCAAAGCTAATGGCCCTTCTTCTATTGGTTTGGATTTCTCCTTGCATGGATTTGAGCATCTTTATGGGATCCCACAACATGCAGAATCACACCAACTTAAAAATACTGG
TGATGGAGATGCTTACCGTCTTTATAACCTGGATGTCTATGGATACCAAATATATGATAAAATGGGCATTTATGGTTCAGTACCTTATCTCCTGGCCCACAAACTGGGCAGAACTATAGGTATTTTCT
GGCTGAATGCCTCGGAAACACTGGTGGAGATCAATACAGAGCCTGCAGTAGAGTACACACTGACCCAGATGGGCCCAGTTGCTGCTAAACAAAAGGTCAGATCTCGCACTCATGTGCACTGGATGTCA
GAGAGTGGCATCATTGATGTTTTTCTGCTGACAGGACCTACACCTTCTGATGTCTTCAAACAGTACTCACACCTTACAGGCACACAAGCCATGCCCCCTCTTTTCTCTTTGGGATACCACCAGTGCCG
CTGGAACTATGAAGATGAGCAGGATGTAAAAGCAGTGGATGCAGGGTTTGATGAGCATGACATTCCTTATGATGCCATGTGGCTGGACATAGAGCACACTGAGGGCAAGAGGTACTTCACCTGGGACA
AAAACAGATTCCCAAACCCCAAGAGGATGCAAGAGCTGCTCAGGAGCAAAAAGCGTAAGCTTGTGGTCATCAGTGATCCCCACATCAAGATTGATCCTGACTACTCAGTATATGTGAAGGCCAAAGAT
CAGGGCTTCTTTGTGAAGAATCAGGAAGGGGAAGACTTTGAAGGGGTGTGTTGGCCAGGTCTCTCCTCTTACCTGGATTTCACCAATCCCAAGGTCAGAGAGTGGTATTCAAGTCTTTTTGCTTTCCC
TGTTTATCAGGGATCTACGGACATCCTCTTCCTTTGGAATGACATGAATGAGCCTTCTGTCTTTAGAGGGCCAGAGCAAACCATGCAGAAGAATGCCATTCATCATGGCAATTGGGAGCACAGAGAGC
TCCACAACATCTACGGTTTTTATCATCAAATGGCTACTGCAGAAGGACTGATAAAACGATCTAAAGGGAAGGAGAGACCCTTTGTTCTTACACGTTCTTTCTTTGCTGGATCACAAAAGTATGGTGCC
GTGTGGACAGGCGACAACACAGCAGAATGGAGCAACTTGAAAATTTCTATCCCAATGTTACTCACTCTCAGCATTACTGGGATCTCTTTTTGCGGAGCTGACATAGGCGGGTTCATTGGGAATCCAGA
GACAGAGCTGCTAGTGCGTTGGTACCAGGCTGGAGCCTACCAGCCCTTCTTCCGTGGCCATGCCACCATGAACACCAAGCGACGAGAGCCCTGGCTCTTTGGGGAGGAACACACCCGACTCATCCGAG
AAGCCATCAGAGAGCGCTATGGCCTCCTGCCATATTGGTATTCTCTGTTCTACCATGCACACGTGGCTTCCCAACCTGTCATGAGGCCTCTGTGGGTAGAGTTCCCTGATGAACTAAAGACTTTTGAT
ATGGAAGATGAATACATGCTGGGGAGTGCATTATTGGTTCATCCAGTCACAGAACCAAAAGCCACCACAGTTGATGTGTTTCTTCCAGGATCAAATGAGGTCTGGTATGACTATAAGACATTTGCTCA
TTGGGAAGGAGGGTGTACTGTAAAGATCCCAGTAGCCTTGGACACTATTCCAGTGTTTCAGCGAGGTGGAAGTGTGATACCAATAAAGACAACTGTAGGAAAATCCACAGGCTGGATGACTGAATCCT
CCTATGGACTCCGGGTTGCTCTAAGCACTAAGGGTTCTTCAGTGGGTGAGTTATATCTTGATGATGGCCATTCATTCCAATACCTCCACCAGAAGCAATTTTTGCACAGGAAGTTTTCATTCTGTTCC
AGTGTTCTGATCAATAGTTTTGCTGACCAGAGGGGTCATTATCCCAGCAAGTGTGTGGTGGAGAAGATCTTGGTCTTAGGCTTCAGGAAGGAGCCATCTTCTGTGACTACCCACTCATCTGATGGTAA
AGATCAGCCTGTGGCTTTTACGTATTGTGCCAAAACATCCATCCTGAGCCTGGAGAAGCTCTCACTCAACATTGCCACTGACTGGGAGGTCCGCATCATATGACAAAGAACTGCCCCTGGTGATGTGA
GCAGGGACCTGCCTGCCCCTTTCAACCTTTCCCCTCACCTTTTTTGAGATTTTTGCTGCAATCTGTTTGCCTTCCCTGAATCAAAATAATCTTTCATTCGTCACCATTATACTAATGAACAATAGATT
TCATGTTTCAAAATTTCAGATTTTACATGTTAAGATGTACTAACAATATTCCTTGTATCAAACATCTCCTTTTCTCCCTGATACATAGCCCTGAGACATTTATAGCGTTCAGGAGTCTTCTATTGCTT
CCATTCCTTCAGCAGGGCTGCGTGGGTCTGTTTTAACGTGGGCCAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGCCTCAGGCCATGCAGCATTGGCGCTCTGGCTGCAGCAGCTGAGTTGCTCA
AGGCCAGTGTCCAAGTGGACAGCAGCCTCTGGTACTCCCCCCAGTTATCTTCCACCCACATGGACTGGGCAGAGCAGCCCTCTTCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTTATTCTCCCC
TAGAGATCGACTTGGCAGCACGAAGGATTCTTTTCTCTTTCATGCTTCTCAGGCTCAATAGTTTCTAATTAATCTTAAAATCCATGTCTTTTACATTGTTTTTTTAATTAAGTGCTGTTTACTAACCA
AATAATATTTATAACATGAGTAAGCTATAATTAATAACAATGAAATAAATACCCATGTACCCACCACTGGACTTCAGAAGTAGAACTCATGACTGGGACTAGGATGAGGCAAGGGAGACCCTGGCCTT
GGGCACAAAATGTAAGGGATGCCAAAAAAATACAGTAATCAAAGTAAGTAATATTTCAATCCAATATTTTTAAAAATCAGAATTAATGCAAAAAAAACCATGATGAACAAAATATTAAAATTTAAAAT
AAAGACAGGATTAGTATTACTGAGTTTTCCTTTTGTCCCAGGCTCTAATATGGCTTGGCATGGGGCAGAACATTACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTCAGTGGCTCC
CTGCTGCCTGCCACAGCATCTGTTTTAGCAGCCTCGACTCCTCAGCACTCCTCAGCACACACCTCTTCTTATCAGGCTTCCTCCACTTAGCAACTTGCTAACGGCCACCTCTGTGCCTTCTGATCCCT
GGGCGCCAATATCCTCCTGCCCTTACCATCCTTCCAGGCCCAACTTAAATCCCACTTTCCCATGAAGCCTAACTGCGTGAACACCCCTACCCCCATACCCATTAGCAGTGATTTTGCCCTTCCCCGTA
ATGCTGTCCCACTTATAACTGTGCTCTACTTAGCATTCTCAGGGATCATACCTTAATGTTTTCAGTATGTCTGCGTTCTCCTACTAGATTGTATGTCCCTCAAGAGCATGTTCTGTTTCTCTTCTGTC
TGACAGAGCACTATTATACCTGACTTTCAGTAACTGTTAGCTGTGATTAGTTAGCTGGTGGATTTAATTGATTAAAAAATTACGATTGAATGTA

hide sequence

RefSeq Acc Id:

NM_001393929 ⟹ NP_001380858

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,487 - 42,353,666 (+)	NCBI
T2T-CHM13v2.0	15	40,079,520 - 40,159,701 (+)	NCBI

Sequence:

show sequence

ATCCGGGTCCTGGAAACGTCGCGGAGCTTGTTTGCTGTGCGGCGTAGCGGCCCCTCTCTCAGACAGTCGTCTGTGCGCCGTGAGACTTTGGACCTACTGCGCAGGCGTCATCCTGTTGGAACCTGGAC
TCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTTTGGGCCTGAA
AAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGAAGTACTGGTTGTAATTTTAGAAAGACACCCAATCGGCTTTTTTAAAAGA
TCGCCCAGGGCCCTTGTCCTGAGAGCTGGGAGCTGGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAAATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTCAGAGACTGTA
ACAAGATCGCATTTTACAGGCGTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAG
GTTCCTCTCCTGGCTGAAATTTATGGTATAGAAGGAAACATTTTCAGGCTTAAAATTAATGAAGAGACTCCTCTAAAACCCAGATTTGAAGTTCCGGATGTCCTCACAAGCAAGCCAAGCACTGTAAG
GCTGATTTCATGCTCTGGGGACACAGGCAGTCTGATATTGGCAGATGGAAAAGGAGACCTGAAGTGCCATATCACAGCAAACCCATTCAAGGTAGACTTGGTGTCTGAAGAAGAGGTTGTGATTAGCA
TAAATTCCCTGGGCCAATTATACTTTGAGCATCTACAGATTCTTCACAAACAAAGAGCTGCTAAAGAAAATGAGGAGGAGACATCAGTGGACACCTCTCAGGAAAATCAAGAAGATCTGGGCCTGTGG
GAAGAGAAATTTGGAAAATTTGTGGATATCAAAGCTAATGGCCCTTCTTCTATTGGTTTGGATTTCTCCTTGCATGGATTTGAGCATCTTTATGGGATCCCACAACATGCAGAATCACACCAACTTAA
AAATACTGGTGATGGAGATGCTTACCGTCTTTATAACCTGGATGTCTATGGATACCAAATATATGATAAAATGGGCATTTATGGTTCAGTACCTTATCTCCTGGCCCACAAACTGGGCAGAACTATAG
GTATTTTCTGGCTGAATGCCTCGGAAACACTGGTGGAGATCAATACAGAGCCTGCAGTAGAGTACACACTGACCCAGATGGGCCCAGTTGCTGCTAAACAAAAGGTCAGATCTCGCACTCATGTGCAC
TGGATGTCAGAGAGTGGCATCATTGATGTTTTTCTGCTGACAGGACCTACACCTTCTGATGTCTTCAAACAGTACTCACACCTTACAGGCACACAAGCCATGCCCCCTCTTTTCTCTTTGGGATACCA
CCAGTGCCGCTGGAACTATGAAGATGAGCAGGATGTAAAAGCAGTGGATGCAGGGTTTGATGAGCATGACATTCCTTATGATGCCATGTGGCTGGACATAGAGCACACTGAGGGCAAGAGGTACTTCA
CCTGGGACAAAAACAGATTCCCAAACCCCAAGAGGATGCAAGAGCTGCTCAGGAGCAAAAAGCGTAAGCTTGTGGTCATCAGTGATCCCCACATCAAGATTGATCCTGACTACTCAGTATATGTGAAG
GCCAAAGATCAGGGCTTCTTTGTGAAGAATCAGGAAGGGGAAGACTTTGAAGGGGTGTGTTGGCCAGGTCTCTCCTCTTACCTGGATTTCACCAATCCCAAGGTCAGAGAGTGGTATTCAAGTCTTTT
TGCTTTCCCTGTTTATCAGGGATCTACGGACATCCTCTTCCTTTGGAATGACATGAATGAGCCTTCTGTCTTTAGAGGGCCAGAGCAAACCATGCAGAAGAATGCCATTCATCATGGCAATTGGGAGC
ACAGAGAGCTCCACAACATCTACGGTTTTTATCATCAAATGGCTACTGCAGAAGGACTGATAAAACGATCTAAAGGGAAGGAGAGACCCTTTGTTCTTACACGTTCTTTCTTTGCTGGATCACAAAAG
TATGGTGCCGTGTGGACAGGCGACAACACAGCAGAATGGAGCAACTTGAAAATTTCTATCCCAATGTTACTCACTCTCAGCATTACTGGGATCTCTTTTTGCGGAGCTGACATAGGCGGGTTCATTGG
GAATCCAGAGACAGAGCTGCTAGTGCGTTGGTACCAGGCTGGAGCCTACCAGCCCTTCTTCCGTGGCCATGCCACCATGAACACCAAGCGACGAGAGCCCTGGCTCTTTGGGGAGGAACACACCCGAC
TCATCCGAGAAGCCATCAGAGAGCGCTATGGCCTCCTGCCATATTGGTATTCTCTGTTCTACCATGCACACGTGGCTTCCCAACCTGTCATGAGGCCTCTGTGGGTAGAGTTCCCTGATGAACTAAAG
ACTTTTGATATGGAAGATGAATACATGCTGGGGAGTGCATTATTGGTTCATCCAGTCACAGAACCAAAAGCCACCACAGTTGATGTGTTTCTTCCAGGATCAAATGAGGTCTGGTATGACTATAAGAC
ATTTGCTCATTGGGAAGGAGGGTGTACTGTAAAGATCCCAGTAGCCTTGGACACTATTCCAGTGTTTCAGCGAGGTGGAAGTGTGATACCAATAAAGACAACTGTAGGAAAATCCACAGGCTGGATGA
CTGAATCCTCCTATGGACTCCGGGTTGCTCTAAGCACTAAGGGTTCTTCAGTGGGTGAGTTATATCTTGATGATGGCCATTCATTCCAATACCTCCACCAGAAGCAATTTTTGCACAGGAAGTTTTCA
TTCTGTTCCAGTGTTCTGATCAATAGTTTTGCTGACCAGAGGGGTCATTATCCCAGCAAGTGTGTGGTGGAGAAGATCTTGGTCTTAGGCTTCAGGAAGGAGCCATCTTCTGTGACTACCCACTCATC
TGATGGTAAAGATCAGCCTGTGGCTTTTACGTATTGTGCCAAAACATCCATCCTGAGCCTGGAGAAGCTCTCACTCAACATTGCCACTGACTGGGAGGTCCGCATCATATGACAAAGAACTGCCCCTG
GTGATGTGAGCAGGGACCTGCCTGCCCCTTTCAACCTTTCCCCTCACCTTTTTTGAGATTTTTGCTGCAATCTGTTTGCCTTCCCTGAATCAAAATAATCTTTCATTCGTCACCATTATACTAATGAA
CAATAGATTTCATGTTTCAAAATTTCAGATTTTACATGTTAAGATGTACTAACAATATTCCTTGTATCAAACATCTCCTTTTCTCCCTGATACATAGCCCTGAGACATTTATAGCGTTCAGGAGTCTT
CTATTGCTTCCATTCCTTCAGCAGGGCTGCGTGGGTCTGTTTTAACGTGGGCCAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGCCTCAGGCCATGCAGCATTGGCGCTCTGGCTGCAGCAGCTG
AGTTGCTCAAGGCCAGTGTCCAAGTGGACAGCAGCCTCTGGTACTCCCCCCAGTTATCTTCCACCCACATGGACTGGGCAGAGCAGCCCTCTTCTGTGTGCACTGCATACGCTGCAGCCGTGGGAGTT
ATTCTCCCCTAGAGATCGACTTGGCAGCACGAAGGATTCTTTTCTCTTTCATGCTTCTCAGGCTCAATAGTTTCTAATTAATCTTAAAATCCATGTCTTTTACATTGTTTTTTTAATTAAGTGCTGTT
TACTAACCAAATAATATTTATAACATGAGTAAGCTATAATTAATAACAATGAAATAAATACCCATGTACCCACCACTGGACTTCAGAAGTAGAACTCATGACTGGGACTAGGATGAGGCAAGGGAGAC
CCTGGCCTTGGGCACAAAATGTAAGGGATGCCAAAAAAATACAGTAATCAAAGTAAGTAATATTTCAATCCAATATTTTTAAAAATCAGAATTAATGCAAAAAAAACCATGATGAACAAAATATTAAA
ATTTAAAATAAAGACAGGATTAGTATTACTGAGTTTTCCTTTTGTCCCAGGCTCTAATATGGCTTGGCATGGGGCAGAACATTACAACATACCAGTCGTGTCATGGTGCCCAAGGCTCCACAGACCTC
AGTGGCTCCCTGCTGCCTGCCACAGCATCTGTTTTAGCAGCCTCGACTCCTCAGCACTCCTCAGCACACACCTCTTCTTATCAGGCTTCCTCCACTTAGCAACTTGCTAACGGCCACCTCTGTGCCTT
CTGATCCCTGGGCGCCAATATCCTCCTGCCCTTACCATCCTTCCAGGCCCAACTTAAATCCCACTTTCCCATGAAGCCTAACTGCGTGAACACCCCTACCCCCATACCCATTAGCAGTGATTTTGCCC
TTCCCCGTAATGCTGTCCCACTTATAACTGTGCTCTACTTAGCATTCTCAGGGATCATACCTTAATGTTTTCAGTATGTCTGCGTTCTCCTACTAGATTGTATGTCCCTCAAGAGCATGTTCTGTTTC
TCTTCTGTCTGACAGAGCACTATTATACCTGACTTTCAGTAACTGTTAGCTGTGATTAGTTAGCTGGTGGATTTAATTGATTAAAAAATTACGATTGAATGTA

hide sequence

RefSeq Acc Id:

NM_001393930 ⟹ NP_001380859

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,201 - 42,284,421 (+)	NCBI
T2T-CHM13v2.0	15	40,079,234 - 40,090,451 (+)	NCBI

Sequence:

show sequence

GTAGCCCCACCCCTTGCTCCTCTAGGTTCAGACGTTAGTGAAGTGAATACTCACCGACGGTATCGGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACA
GTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGTTCGTCCCGCC
TTCTTCCGGCTCTGCTCTAAGGGCGGGATTATCCGGGTCCTGGAAACGTCGCGGAGCTTGTTTGCTGTGCGGCGTAGCGGCCCCTCTCTCAGACAGTCGTCTGTGCGCCGTGAGACTTTGGACCTACT
GCGCAGGCGTCATCCTGTTGGAACCTGGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAA
TCATTGTAGAAACGCTAGTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGAAGTACTGGTTGTAATTTTA
GAAAGACACCCAATCGGCTTTTTTAAAAGATCGCCCAGGGCCCTTGTCCTGAGAGCTGGGAGCTGGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAAATAAGTCTTGAAGATGAAG
CTGTAGATAAAAACATTTTCAGAGACTGTAACAAGATCGCATTTTACAGGCGTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACC
AGGTTCCAAATCATCAATGAAGCAAGTAAGGTCAGGTGCCAGGACCAGAGCCCAACAACTCTGGATGCCTTCAAAGGCAAAGAAACCACAGTCCAGGAGGAGACACAGGATCTCAGCACAAGACAGCA
CCTGGCTCAAAAGGAAGCTGAGGAGCCTGATAAACAAGGACAAATTACCTGGGACATCAGCAACGTAGCTCCCAAGACTGAGAACTTTGAGGACCTCTTGGAACAAACTCCATGCTCAGCCTGTTTGC
AAGGTTTCACCAGAGACAACACTTCCAGCAGCTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTGCCTCTTCATCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAG
CCACCTTCTCAGCAGATAAGGCACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAGCACACCTGGACAGGCCAGT
TGTCCTTGGGGAACAGGCCAGTGCCCAGCGTGAGGTTGCCAGTATTCTTTGTAGAAAATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGTAGAAGGGACAATTAGTGTCCTACAGCAATTTAATG
AACTATTAGACCATCCTCTGGATCCCGGGAGGTCTTGATCACAGCTGGTAGAGGTGGCCACTCACTGTTCTATGTCTTTTAGGTTAACAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGA
AAAGCAAGATCAACCTACCAAGGAAGAGTTGATGGAGTCATAATTTTCCTACTTAACACCCACTGCAAATTTAAATATGTGTTCTAGGGCTGTTTGTTAATTCTATTATGGTCTTTACTAATTGTGAT
TCCCAGTTCTGGGTGAATAAAAAGTTTTTGTTTTAATGTAATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTTACAAAATATCTGGTATTTTCGCCTATAT
GGCCATTAAAAAAACTAGATTTGTGGATAACAAA

hide sequence

RefSeq Acc Id:

NM_001393931 ⟹ NP_001380860

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,201 - 42,284,421 (+)	NCBI
T2T-CHM13v2.0	15	40,079,234 - 40,090,451 (+)	NCBI

Sequence:

show sequence

GTAGCCCCACCCCTTGCTCCTCTAGGTTCAGACGTTAGTGAAGTGAATACTCACCGACGGTATC
GGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGC
CGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGTTCGTCCCGCCTTCTTCCGGCTCTGCTCTAAGGGCGGGATTATCCGGGTCCTGGAAACGTCGCGGAGCTTGTTTG
CTGTGCGGCGTAGCGGCCCCTCTCTCAGACAGTCGTCTGTGCGCCGTGAGACTTTGGACCTACTGCGCAGGCGTCATCCTGTTGGAACCTGGTCAGCTGGGTTAGAGAGATCGCTACATGCCAGCCTG
GCCTGAGTCTTTTCTGTCTCCCAGCCGTTAAAGGTTTTAGGACCAGGCAGGCACCCCGTGCAGGATTTGGCTCTCTACTTCCGCTCGCCCCAGCCCTTCATCCCTTCTAAGTCAATGTCAGACTTTGG
GGCCAGAAAGTCTGGAAAAGCCCTAAGCCTGGCTGCCCAAGTGGCGTCTAGTAGTGAGTTCTCCGGTTTGGGTGGTATTTAAGCAAAGGCTGGAATTCGGCGGTGGTGGAGTACACGCGATTCCTAGA
CTGGGTAGTGTAACAACCTTCAAAGGCCCCTTCTAGCCCTGAAGAGTACGATGCTGCAGTACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCACTTCCCACCCTTAACCGAAAACG
GAGACAGAGAGGGTCAGTTTTCAAAATCTGTGGCGTGACCCCGCCACTGAGATAGATCTGCAGATGCTTCGTCCCAGTCAGGGAGGCCGTCTCGGCATTTCCAGGTTCTTAACGCTCTTGATTTTTAC
CCTCTAGGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTT
TGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGAAGTACTGGTTGTAATTTTAGAAAGACACCCAATCGGCTT
TTTTAAAAGATCGCCCAGGGCCCTTGTCCTGAGAGCTGGGAGCTGGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAAATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTC
AGAGACTGTAACAAGATCGCATTTTACAGGCGTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGA
AGCAAGTAAGGTCAGGTGCCAGGACCAGAGCCCAACAACTCTGGATGCCTTCAAAGGCAAAGAAACCACAGTCCAGGAGGAGACACAGGATCTCAGCACAAGACAGCACCTGGCTCAAAAGGAAGCTG
AGGAGCCTGATAAACAAGGACAAATTACCTGGGACATCAGCAACGTAGCTCCCAAGACTGAGAACTTTGAGGACCTCTTGGAACAAACTCCATGCTCAGCCTGTTTGCAAGGTTTCACCAGAGACAAC
ACTTCCAGCAGCTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTGCCTCTTCATCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATAAG
GCACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAGCACACCTGGACAGGCCAGTTGTCCTTGGGGAACAGGCCA
GTGCCCAGCGTGAGGTTGCCAGTATTCTTTGTAGAAAATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGTAGAAGGGACAATTAGTGTCCTACAGCAATTTAATGAACTATTAGACCATCCTCTG
GATCCCGGGAGGTCTTGATCACAGCTGGTAGAGGTGGCCACTCACTGTTCTATGTCTTTTAGGTTAACAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCA
AGGAAGAGTTGATGGAGTCATAATTTTCCTACTTAACACCCACTGCAAATTTAAATATGTGTTCTAGGGCTGTTTGTTAATTCTATTATGGTCTTTACTAATTGTGATTCCCAGTTCTGGGTGAATAA
AAAGTTTTTGTTTTAATGTAATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTTACAAAATATCTGGTATTTTCGCCTATATGGCCATTAAAAAAACTAGAT
TTGTGGATAACAAA

hide sequence

RefSeq Acc Id:

NM_001393932 ⟹ NP_001380861

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,201 - 42,284,421 (+)	NCBI
T2T-CHM13v2.0	15	40,079,234 - 40,090,451 (+)	NCBI

Sequence:

show sequence

GTAGCCCCACCCCTTGCTCCTCTAGGTTCAGACGTTAGTGAAGTGAATACTCACCGACGGTATC
GGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGC
CGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGTTCGTCCCGCCTTCTTCCGGCTCTGCTCTAAGGGCGGGATTATCCGGGTCCTGGAAACGTCGCGGAGCTTGTTTG
CTGTGCGGCGTAGCGGCCCCTCTCTCAGACAGTCGTCTGTGCGCCGTGAGACTTTGGACCTACTGCGCAGGCGTCATCCTGTTGGAACCTGGTCAGCTGGGTTAGAGAGATCGCTACATGCCAGCCTG
GCCTGAGTCTTTTCTGTCTCCCAGCCGTTAAAGGTTTTAGGACCAGGCAGGCACCCCGTGCAGGATTTGGCTCTCTACTTCCGCTCGCCCCAGCCCTTCATCCCTTCTAAGTCAATGTCAGACTTTGG
GGCCAGAAAGTCTGGAAAAGCCCTAAGCCTGGCTGCCCAAGTGGCGTCTAGTAGTGAGTTCTCCGGTTTGGGTGGTATTTAAGCAAAGGCTGGAATTCGGCGGTGGTGGAGTACACGCGATTCCTAGA
CTGGGTAGTGTAACAACCTTCAAAGGCCCCTTCTAGCCCTGAAGAGTACGATGCTGCAGTACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCACTTCCCACCCTTAACCGAAAACG
GAGACAGAGAGGGTCAGTTTTCAAAATCTGTGGCGTGACCCCGCCACTGAGATAGATCTGCAGATGCTTCGTCCCAGTCAGGGAGGCCGTCTCGGCATTTCCAGGTTCTTAACGCTCTTGATTTTTAC
CCTCTAGGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTT
TGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGAAGTACTGGTTGTAATTTTAGAAAGACACCCAATCGGCTT
TTTTAAAAGATCGCCCAGGGCCCTTGTCCTGAGAGCTGGGAGCTGGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAAATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTC
AGAGACTGTAACAAGATCGCATTTTACAGGCGTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGA
AGCAAGTAAGCCTGTTTGCAAGGTTTCACCAGAGACAACACTTCCAGCAGCTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTGCCTCTTCATCTAAGCCTAATGAAAA
TGAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATAAGGCACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAG
CACACCTGGACAGGCCAGTTGTCCTTGGGGAACAGGCCAGTGCCCAGCGTGAGGTTGCCAGTATTCTTTGTAGAAAATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGTAGAAGGGACAATTAGT
GTCCTACAGCAATTTAATGAACTATTAGACCATCCTCTGGATCCCGGGAGGTCTTGATCACAGCTGGTAGAGGTGGCCACTCACTGTTCTATGTCTTTTAGGTTAACAGTTCTTTACATAACAGTGAA
GAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAGGAAGAGTTGATGGAGTCATAATTTTCCTACTTAACACCCACTGCAAATTTAAATATGTGTTCTAGGGCTGTTTGTTAATTCTATTAT
GGTCTTTACTAATTGTGATTCCCAGTTCTGGGTGAATAAAAAGTTTTTGTTTTAATGTAATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTTACAAAATAT
CTGGTATTTTCGCCTATATGGCCATTAAAAAAACTAGATTTGTGGATAACAAA

hide sequence

RefSeq Acc Id:

NM_001393933 ⟹ NP_001380862

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,201 - 42,284,421 (+)	NCBI
T2T-CHM13v2.0	15	40,079,234 - 40,090,451 (+)	NCBI

Sequence:

show sequence

GTAGCCCCACCCCTTGCTCCTCTAGGTTCAGACGTTAGTGAAGTGAATACTCACCGACGGTATC
GGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGC
CGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGTTCGTCCCGCCTTCTTCCGGCTCTGCTCTAAGGGCGGGATTATCCGGGTCCTGGAAACGTCGCGGAGCTTGTTTG
CTGTGCGGCGTAGCGGCCCCTCTCTCAGACAGTCGTCTGTGCGCCGTGAGACTTTGGACCTACTGCGCAGGCGTCATCCTGTTGGAACCTGGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTT
CGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTTTGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAGATTTGTCACTC
CATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGAAGTACTGGTTGTAATTTTAGAAAGACACCCAATCGGCTTTTTTAAAAGATCGCCCAGGGCCCTTGTCCTGAGAGCTGGGAGCT
GGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAAATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTCAGAGACTGTAACAAGATCGCATTTTACAGGCGTCAGAAACAGTG
GCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGCCTGTTTGCAAGGTTTCACCAGAGACAACACTTC
CAGCAGCTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTGCCTCTTCATCTAAGCCTAATGAAAATGAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATAAGGCACA
ACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAATCAGAAGCACACCTGGACAGGCCAGTTGTCCTTGGGGAACAGGCCAGTGCC
CAGCGTGAGGTTGCCAGTATTCTTTGTAGAAAATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGTAGAAGGGACAATTAGTGTCCTACAGCAATTTAATGAACTATTAGACCATCCTCTGGATCC
CGGGAGGTCTTGATCACAGCTGGTAGAGGTGGCCACTCACTGTTCTATGTCTTTTAGGTTAACAGTTCTTTACATAACAGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAGGAA
GAGTTGATGGAGTCATAATTTTCCTACTTAACACCCACTGCAAATTTAAATATGTGTTCTAGGGCTGTTTGTTAATTCTATTATGGTCTTTACTAATTGTGATTCCCAGTTCTGGGTGAATAAAAAGT
TTTTGTTTTAATGTAATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTTACAAAATATCTGGTATTTTCGCCTATATGGCCATTAAAAAAACTAGATTTGTG
GATAACAAA

hide sequence

RefSeq Acc Id:

NM_198141 ⟹ NP_937784

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,201 - 42,353,666 (+)	NCBI
GRCh37	15	42,566,366 - 42,646,599 (+)	NCBI
Build 36	15	40,353,658 - 40,433,156 (+)	NCBI Archive
HuRef	15	19,414,521 - 19,494,038 (+)	ENTREZGENE
CHM1_1	15	42,684,852 - 42,764,352 (+)	NCBI
T2T-CHM13v2.0	15	40,079,234 - 40,159,701 (+)	NCBI

Sequence:

show sequence

GTAGCCCCACCCCTTGCTCCTCTAGGTTCAGACGTTAGTGAAGTGAATACTCACCGACGGTATC
GGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACAGTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGC
CGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGTTCGTCCCGCCTTCTTCCGGCTCTGCTCTAAGGGCGGGATTATCCGGGTCCTGGAAACGTCGCGGAGCTTGTTTG
CTGTGCGGCGTAGCGGCCCCTCTCTCAGACAGTCGTCTGTGCGCCGTGAGACTTTGGACCTACTGCGCAGGCGTCATCCTGTTGGAACCTGGTCAGCTGGGTTAGAGAGATCGCTACATGCCAGCCTG
GCCTGAGTCTTTTCTGTCTCCCAGCCGTTAAAGGTTTTAGGACCAGGCAGGCACCCCGTGCAGGATTTGGCTCTCTACTTCCGCTCGCCCCAGCCCTTCATCCCTTCTAAGTCAATGTCAGACTTTGG
GGCCAGAAAGTCTGGAAAAGCCCTAAGCCTGGCTGCCCAAGTGGCGTCTAGTAGTGAGTTCTCCGGTTTGGGTGGTATTTAAGCAAAGGCTGGAATTCGGCGGTGGTGGAGTACACGCGATTCCTAGA
CTGGGTAGTGTAACAACCTTCAAAGGCCCCTTCTAGCCCTGAAGAGTACGATGCTGCAGTACAATCTGGCTGGAGACCTAGCCTCCAGCAAAGACCCGGCCGGCACTTCCCACCCTTAACCGAAAACG
GAGACAGAGAGGGTCAGTTTTCAAAATCTGTGGCGTGACCCCGCCACTGAGATAGATCTGCAGATGCTTCGTCCCAGTCAGGGAGGCCGTCTCGGCATTTCCAGGTTCTTAACGCTCTTGATTTTTAC
CCTCTAGGACTCATTGCGTACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTT
TGGGCCTGAAAAATTCCAGGAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGAAGTACTGGTTGTAATTTTAGAAAGACACCCAATCGGCTT
TTTTAAAAGATCGCCCAGGGCCCTTGTCCTGAGAGCTGGGAGCTGGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAAATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTC
AGAGACTGTAACAAGATCGCATTTTACAGGCGTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTCAGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGA
AGCAAGTAAGGTTCCTCTCCTGGCTGAAATTTATGGTATAGAAGGAAACATTTTCAGGCTTAAAATTAATGAAGAGACTCCTCTAAAACCCAGATTTGAAGTTCCGGATGTCCTCACAAGCAAGCCAA
GCACTGTAAGGCTGATTTCATGCTCTGGGGACACAGGCAGTCTGATATTGGCAGATGGAAAAGGAGACCTGAAGTGCCATATCACAGCAAACCCATTCAAGGTAGACTTGGTGTCTGAAGAAGAGGTT
GTGATTAGCATAAATTCCCTGGGCCAATTATACTTTGAGCATCTACAGATTCTTCACAAACAAAGAGCTGCTAAAGAAAATGAGGAGGAGACATCAGTGGACACCTCTCAGGAAAATCAAGAAGATCT
GGGCCTGTGGGAAGAGAAATTTGGAAAATTTGTGGATATCAAAGCTAATGGCCCTTCTTCTATTGGTTTGGATTTCTCCTTGCATGGATTTGAGCATCTTTATGGGATCCCACAACATGCAGAATCAC
ACCAACTTAAAAATACTGGTGATGGAGATGCTTACCGTCTTTATAACCTGGATGTCTATGGATACCAAATATATGATAAAATGGGCATTTATGGTTCAGTACCTTATCTCCTGGCCCACAAACTGGGC
AGAACTATAGGTATTTTCTGGCTGAATGCCTCGGAAACACTGGTGGAGATCAATACAGAGCCTGCAGTAGAGTACACACTGACCCAGATGGGCCCAGTTGCTGCTAAACAAAAGGTCAGATCTCGCAC
TCATGTGCACTGGATGTCAGAGAGTGGCATCATTGATGTTTTTCTGCTGACAGGACCTACACCTTCTGATGTCTTCAAACAGTACTCACACCTTACAGGCACACAAGCCATGCCCCCTCTTTTCTCTT
TGGGATACCACCAGTGCCGCTGGAACTATGAAGATGAGCAGGATGTAAAAGCAGTGGATGCAGGGTTTGATGAGCATGACATTCCTTATGATGCCATGTGGCTGGACATAGAGCACACTGAGGGCAAG
AGGTACTTCACCTGGGACAAAAACAGATTCCCAAACCCCAAGAGGATGCAAGAGCTGCTCAGGAGCAAAAAGCGTAAGCTTGTGGTCATCAGTGATCCCCACATCAAGATTGATCCTGACTACTCAGT
ATATGTGAAGGCCAAAGATCAGGGCTTCTTTGTGAAGAATCAGGAAGGGGAAGACTTTGAAGGGGTGTGTTGGCCAGGTCTCTCCTCTTACCTGGATTTCACCAATCCCAAGGTCAGAGAGTGGTATT
CAAGTCTTTTTGCTTTCCCTGTTTATCAGGGATCTACGGACATCCTCTTCCTTTGGAATGACATGAATGAGCCTTCTGTCTTTAGAGGGCCAGAGCAAACCATGCAGAAGAATGCCATTCATCATGGC
AATTGGGAGCACAGAGAGCTCCACAACATCTACGGTTTTTATCATCAAATGGCTACTGCAGAAGGACTGATAAAACGATCTAAAGGGAAGGAGAGACCCTTTGTTCTTACACGTTCTTTCTTTGCTGG
ATCACAAAAGTATGGTGCCGTGTGGACAGGCGACAACACAGCAGAATGGAGCAACTTGAAAATTTCTATCCCAATGTTACTCACTCTCAGCATTACTGGGATCTCTTTTTGCGGAGCTGACATAGGCG
GGTTCATTGGGAATCCAGAGACAGAGCTGCTAGTGCGTTGGTACCAGGCTGGAGCCTACCAGCCCTTCTTCCGTGGCCATGCCACCATGAACACCAAGCGACGAGAGCCCTGGCTCTTTGGGGAGGAA
CACACCCGACTCATCCGAGAAGCCATCAGAGAGCGCTATGGCCTCCTGCCATATTGGTATTCTCTGTTCTACCATGCACACGTGGCTTCCCAACCTGTCATGAGGCCTCTGTGGGTAGAGTTCCCTGA
TGAACTAAAGACTTTTGATATGGAAGATGAATACATGCTGGGGAGTGCATTATTGGTTCATCCAGTCACAGAACCAAAAGCCACCACAGTTGATGTGTTTCTTCCAGGATCAAATGAGGTCTGGTATG
ACTATAAGACATTTGCTCATTGGGAAGGAGGGTGTACTGTAAAGATCCCAGTAGCCTTGGACACTATTCCAGTGTTTCAGCGAGGTGGAAGTGTGATACCAATAAAGACAACTGTAGGAAAATCCACA
GGCTGGATGACTGAATCCTCCTATGGACTCCGGGTTGCTCTAAGCACTAAGGGTTCTTCAGTGGGTGAGTTATATCTTGATGATGGCCATTCATTCCAATACCTCCACCAGAAGCAATTTTTGCACAG
GAAGTTTTCATTCTGTTCCAGTGTTCTGATCAATAGTTTTGCTGACCAGAGGGGTCATTATCCCAGCAAGTGTGTGGTGGAGAAGATCTTGGTCTTAGGCTTCAGGAAGGAGCCATCTTCTGTGACTA
CCCACTCATCTGATGGTAAAGATCAGCCTGTGGCTTTTACGTATTGTGCCAAAACATCCATCCTGAGCCTGGAGAAGCTCTCACTCAACATTGCCACTGACTGGGAGGTCCGCATCATATGACAAAGA
ACTGCCCCTGGTGATGTGAGCAGGGACCTGCCTGCCCCTTTCAACCTTTCCCCTCACCTTTTTTGAGATTTTTGCTGCAATCTGTTTGCCTTCCCTGAATCAAAATAATCTTTCATTCGTCACCATTA
TACTAATGAACAATAGATTTCATGTTTCAAAATTTCAGATTTTACATGTTAAGATGTACTAACAATATTCCTTGTATCAAACATCTCCTTTTCTCCCTGATACATAGCCCTGAGACATTTATAGCGTT
CAGGAGTCTTCTATTGCTTCCATTCCTTCAGCAGGGCTGCGTGGGTCTGTTTTAACGTGGGCCAAGCCTACCTGGGCAGCCCATTTGCCAGGGCTTGCCTCAGGCCATGCAGCATTGGCGCTCTGGCT
GCAGCAGCTGAGTTGCTCAAGGCCAGTGTCCAAGTGGACAGCAGCCTCTGGTACTCCCCCCAGTTATCTTCCACCCACATGGACTGGGCAGAGCAGCCCTCTTCTGTGTGCACTGCATACGCTGCAGC
CGTGGGAGTTATTCTCCCCTAGAGATCGACTTGGCAGCACGAAGGATTCTTTTCTCTTTCATGCTTCTCAGGCTCAATAGTTTCTAATTAATCTTAAAATCCATGTCTTTTACATTGTTTTTTTAATT
AAGTGCTGTTTACTAACCAAATAATATTTATAACATGAGTAAGCTATAATTAATAACAATGAAATAAATACCCATGTACCCACCACTGGACTTCAGAAGTAGAACTCATGACTGGGACTAGGATGAGG
CAAGGGAGACCCTGGCCTTGGGCACAAAATGTAAGGGATGCCAAAAAAATACAGTAATCAAAGTAAGTAATATTTCAATCCAATATTTTTAAAAATCAGAATTAATGCAAAAAAAACCATGATGAACA
AAATATTAAAATTTAAAATAAAGACAGGATTAGTATTACTGAGTTTTCCTTTTGTCCCAGGCTCTAATATGGCTTGGCATGGGGCAGAACATTACAACATACCAGTCGTGTCATGGTGCCCAAGGCTC
CACAGACCTCAGTGGCTCCCTGCTGCCTGCCACAGCATCTGTTTTAGCAGCCTCGACTCCTCAGCACTCCTCAGCACACACCTCTTCTTATCAGGCTTCCTCCACTTAGCAACTTGCTAACGGCCACC
TCTGTGCCTTCTGATCCCTGGGCGCCAATATCCTCCTGCCCTTACCATCCTTCCAGGCCCAACTTAAATCCCACTTTCCCATGAAGCCTAACTGCGTGAACACCCCTACCCCCATACCCATTAGCAGT
GATTTTGCCCTTCCCCGTAATGCTGTCCCACTTATAACTGTGCTCTACTTAGCATTCTCAGGGATCATACCTTAATGTTTTCAGTATGTCTGCGTTCTCCTACTAGATTGTATGTCCCTCAAGAGCAT
GTTCTGTTTCTCTTCTGTCTGACAGAGCACTATTATACCTGACTTTCAGTAACTGTTAGCTGTGATTAGTTAGCTGGTGGATTTAATTGATTAAAAAATTACGATTGAATGTA

hide sequence

RefSeq Acc Id:

NR_172055

RefSeq Status:

REVIEWED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,201 - 42,284,421 (+)	NCBI
T2T-CHM13v2.0	15	40,079,234 - 40,090,451 (+)	NCBI

Sequence:

show sequence

GTAGCCCCACCCCTTGCTCCTCTAGGTTCAGACGTTAGTGAAGTGAATACTCACCGACGGTATCGGAATGTGCCATTTGGACCGGTCGGCAGCAGCTACGGTTGCCGGTCCCGCACTGAAAAACGACA
GTGGTGACGGGTGAGCTCCCAGAAGCAGAAGAATGACAGGCAACACCTGAAGCCACGCAGCCGCCGCCATCTTCACAGCCGTGGAGTGCCTACCGAAAGCATTTCACCCTCTTCCGGACTCATTGCGT
ACACGCCCTCACCGCCGCCCAGTTTCGGTTCCTAACAAAAGCACGTTCCTCATCAGCCACCCATAATCAAGACAAATTTGCCAAATAAATCATTGTAGAAACGCTAGTTTGGGCCTGAAAAATTCCAG
GAGCAAGAGTCAAGATTTGTCACTCCATGAGAATCTGGAGGGGACTCCCTTCCCAGAAACTTGACGATGAAGTACTGGTTGTAATTTTAGAAAGACACCCAATCGGCTTTTTTAAAAGATCGCCCAGG
GCCCTTGTCCTGAGAGCTGGGAGCTGGTCGGAGTGACAGAGAAGCCATGGAAGCAGCAGTGAAAGAGGAAATAAGTCTTGAAGATGAAGCTGTAGATAAAAACATTTTCAGAGACTGTAACAAGATCG
CATTTTACAGGAAGAAAAGCGTATTATGTTAATTCTGAACAGGTATCTAGAGGGAAGTCTACAGTGAATGCCTGGCGTCAGAAACAGTGGCTTTCCAAGAAGTCCACCTATCAGGCATTATTGGATTC
AGTCACAACAGATGAAGACAGCACCAGGTTCCAAATCATCAATGAAGCAAGTAAGGTCAGGTGCCAGGACCAGAGCCCAACAACTCTGGATGCCTTCAAAGGCAAAGAAACCACAGTCCAGGAGGAGA
CACAGGATCTCAGCACAAGACAGCACCTGGCTCAAAAGGAAGCTGAGGAGCCTGATAAACAAGGACAAATTACCTGGGACATCAGCAACGTAGCTCCCAAGACTGAGAACTTTGAGGACCTCTTGGAA
CAAACTCCATGCTCAGCCTGTTTGCAAGGTTTCACCAGAGACAACACTTCCAGCAGCTTCTCCGAGGATGCAGGAATATCTCTGAGCACCTCTGTGAAGTTACCCCTTGCCTCTTCATCTAAGCCTAA
TGAAAATGAAGCTTTGCCCAACCAGCCACCTTCTCAGCAGATAAGGCACAACTACCGCTTATTAGCCAGTACTGTGTCTGCAGAAATGGCCAGGAACAGGCAGCTAATTTGGGAACTGGCCAGACAAT
CAGAAGCACACCTGGACAGGCCAGTTGTCCTTGGGGAACAGGCCAGTGCCCAGCGTGAGGTTGCCAGTATTCTTTGTAGAAAATCAGTGCTTGCAATAAACCAACTGGCTGCAACTGTAGAAGGGACA
ATTAGTGTCCTACAGCAATTTAATGAACTATTAGACCATCCTCTGGATCCCGGGAGGTCTTGATCACAGCTGGTAGAGGTGGCCACTCACTGTTCTATGTCTTTTAGGTTAACAGTTCTTTACATAAC
AGTGAAGAGTCCTGGTGCCTCAGGAAAAGCAAGATCAACCTACCAAGGAAGAGTTGATGGAGTCATAATTTTCCTACTTAACACCCACTGCAAATTTAAATATGTGTTCTAGGGCTGTTTGTTAATTC
TATTATGGTCTTTACTAATTGTGATTCCCAGTTCTGGGTGAATAAAAAGTTTTTGTTTTAATGTAATTGTGATCAACACTATGCTTGAAGACATAGACAAAGCTATTTCTACCACCATGATGTTTACA
AAATATCTGGTATTTTCGCCTATATGGCCATTAAAAAAACTAGATTTGTGGATAACAAA

hide sequence


Protein RefSeqs	NP_001288338	(Get FASTA)	NCBI Sequence Viewer
	NP_001288339	(Get FASTA)	NCBI Sequence Viewer
	NP_001380857	(Get FASTA)	NCBI Sequence Viewer
	NP_001380858	(Get FASTA)	NCBI Sequence Viewer
	NP_001380859	(Get FASTA)	NCBI Sequence Viewer
	NP_001380860	(Get FASTA)	NCBI Sequence Viewer
	NP_001380861	(Get FASTA)	NCBI Sequence Viewer
	NP_001380862	(Get FASTA)	NCBI Sequence Viewer
	NP_937784	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH59406	(Get FASTA)	NCBI Sequence Viewer
	AAH93833	(Get FASTA)	NCBI Sequence Viewer
	AAI12052	(Get FASTA)	NCBI Sequence Viewer
	AAN74756	(Get FASTA)	NCBI Sequence Viewer
	AAN74757	(Get FASTA)	NCBI Sequence Viewer
	AAO14993	(Get FASTA)	NCBI Sequence Viewer
	BAB84863	(Get FASTA)	NCBI Sequence Viewer
	BAG62987	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000326227
	ENSP00000326227.8
	ENSP00000399557
	ENSP00000454747
GenBank Protein	Q8TET4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_937784 ⟸ NM_198141
- Peptide Label:	isoform 1
- UniProtKB:	Q8IZM4 (UniProtKB/Swiss-Prot), Q8IWZ0 (UniProtKB/Swiss-Prot), Q52LQ4 (UniProtKB/Swiss-Prot), Q8IZM5 (UniProtKB/Swiss-Prot), Q8TET4 (UniProtKB/Swiss-Prot), Q2M2A3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAAVKEEISLEDEAVDKNIFRDCNKIAFYRRQKQWLSKKSTYQALLDSVTTDEDSTRFQIINEASKVPLLAEIYGIEGNIFRLKINEETPLKPRFEVPDVLTSKPSTVRLISCSGDTGSLILADGKG DLKCHITANPFKVDLVSEEEVVISINSLGQLYFEHLQILHKQRAAKENEEETSVDTSQENQEDLGLWEEKFGKFVDIKANGPSSIGLDFSLHGFEHLYGIPQHAESHQLKNTGDGDAYRLYNLDVYGY QIYDKMGIYGSVPYLLAHKLGRTIGIFWLNASETLVEINTEPAVEYTLTQMGPVAAKQKVRSRTHVHWMSESGIIDVFLLTGPTPSDVFKQYSHLTGTQAMPPLFSLGYHQCRWNYEDEQDVKAVDAG FDEHDIPYDAMWLDIEHTEGKRYFTWDKNRFPNPKRMQELLRSKKRKLVVISDPHIKIDPDYSVYVKAKDQGFFVKNQEGEDFEGVCWPGLSSYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDM NEPSVFRGPEQTMQKNAIHHGNWEHRELHNIYGFYHQMATAEGLIKRSKGKERPFVLTRSFFAGSQKYGAVWTGDNTAEWSNLKISIPMLLTLSITGISFCGADIGGFIGNPETELLVRWYQAGAYQP FFRGHATMNTKRREPWLFGEEHTRLIREAIRERYGLLPYWYSLFYHAHVASQPVMRPLWVEFPDELKTFDMEDEYMLGSALLVHPVTEPKATTVDVFLPGSNEVWYDYKTFAHWEGGCTVKIPVALDT IPVFQRGGSVIPIKTTVGKSTGWMTESSYGLRVALSTKGSSVGELYLDDGHSFQYLHQKQFLHRKFSFCSSVLINSFADQRGHYPSKCVVEKILVLGFRKEPSSVTTHSSDGKDQPVAFTYCAKTSIL SLEKLSLNIATDWEVRII hide sequence

RefSeq Acc Id:	NP_001288338 ⟸ NM_001301409
- Peptide Label:	isoform 2
- UniProtKB:	H3BN99 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAAVKEEISLEDEAVDKNIFRDCNKIAFYRRQKQWLSKKSTYQALLDSVTTDEDSTRFQIINE ASKVPLLAEIYGIEGNIFRLKINEETPLKPRFEVPDVLTSKPSTVRLISCSGDTGSLILADGKGDLKCHITANPFKVDLVSEEEVVISINSLGQLYFEHLQILHKQRAAKENEEETSVDTSQENQEDL GLWEEKFGKFVDIKANGPSSIGLDFSLHGFEHLYGIPQHAESHQLKNTGDGDAYRLYNLDVYGYQIYDKMGIYGSVPYLLAHKLGRTIGIFWLNASETLVEINTEPAVEYTLTQMGPVAAKQKVRSRT HVHWMSESGIIDVFLLTGPTPSDVFKQYSHLTDIGEK hide sequence

RefSeq Acc Id:	NP_001288339 ⟸ NM_001301410
- Peptide Label:	isoform 3
- UniProtKB:	B4DWC5 (UniProtKB/TrEMBL), E7EWB6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAAVKEEISLEDEAVDKNIFRDCNKIAFYRRQKQWLSKKSTYQALLDSVTTDEDSTRFQIINE ASKVRCQDQSPTTLDAFKGKETTVQEETQDLSTRQHLAQKEAEEPDKQGQITWDISNVAPKTENFEDLLEQTPCSACLQGFTRDNTSSSFSEDAGISLSTSVKLPLASSSKPNENEALPNQPPSQQIR HNYRLLASTVSAEMARNRQLIWELARQSEAHLDRPVVLGEQASAQREVASILCRKSVLAINQLAATVEGTISVLQQFNELLDHPLDPGRS hide sequence

Ensembl Acc Id:

ENSP00000456360 ⟸ ENST00000570013

Ensembl Acc Id:

ENSP00000399557 ⟸ ENST00000440615

Protein Domains

Glycoside hydrolase family 31 N-terminal Glycoside hydrolase family 31 TIM barrel Glycosyl hydrolase family 31 C-terminal

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8TET4-F1-model_v2	AlphaFold	Q8TET4	1-914	view protein structure

RGD ID:

6792360

Promoter ID:

HG_KWN:21129

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

NM_001110503, NM_015497, NM_198141, UC001ZPF.2, UC001ZPH.2, UC010BCT.1, UC010BCU.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	15	40,352,666 - 40,353,557 (+)	MPROMDB

RGD ID:

6792358

Promoter ID:

HG_KWN:21130

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Lymphoblastoid, NB4

Transcripts:

UC001ZPJ.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	15	40,355,051 - 40,355,551 (+)	MPROMDB

RGD ID:

7229215

Promoter ID:

EPDNEW_H20353

Type:

initiation region

Name:

GANC_1

Description:

glucosidase alpha, neutral C

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H20355 EPDNEW_H20356 EPDNEW_H20357

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,273,203 - 42,273,263	EPDNEW

RGD ID:

7229219

Promoter ID:

EPDNEW_H20355

Type:

initiation region

Name:

GANC_2

Description:

glucosidase alpha, neutral C

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H20353 EPDNEW_H20356 EPDNEW_H20357

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,274,244 - 42,274,304	EPDNEW

RGD ID:

7229221

Promoter ID:

EPDNEW_H20356

Type:

initiation region

Name:

GANC_3

Description:

glucosidase alpha, neutral C

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H20353 EPDNEW_H20355 EPDNEW_H20357

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,274,447 - 42,274,507	EPDNEW

RGD ID:

7229223

Promoter ID:

EPDNEW_H20357

Type:

initiation region

Name:

GANC_4

Description:

glucosidase alpha, neutral C

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H20353 EPDNEW_H20355 EPDNEW_H20356

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	15	42,353,126 - 42,353,186	EPDNEW

Database	Acc Id	Source(s)
COSMIC	GANC	COSMIC
Ensembl Genes	ENSG00000214013	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000318010	ENTREZGENE
	ENST00000318010.13	UniProtKB/Swiss-Prot
	ENST00000440615	ENTREZGENE
	ENST00000566442	ENTREZGENE
Gene3D-CATH	2.60.40.1180	UniProtKB/Swiss-Prot
	Glycosidases	UniProtKB/Swiss-Prot
	glycosyl hydrolase (family 31)	UniProtKB/Swiss-Prot
GTEx	ENSG00000214013	GTEx
HGNC ID	HGNC:4139	ENTREZGENE
Human Proteome Map	GANC	Human Proteome Map
InterPro	Gal_mutarotase_sf_dom	UniProtKB/Swiss-Prot
	Glyco_hydro_31	UniProtKB/Swiss-Prot
	Glyco_hydro_31_AS	UniProtKB/Swiss-Prot
	Glyco_hydro_31_C	UniProtKB/Swiss-Prot
	Glyco_hydro_31_N_dom	UniProtKB/Swiss-Prot
	Glyco_hydro_b	UniProtKB/Swiss-Prot
	Glycoside_hydrolase_SF	UniProtKB/Swiss-Prot
KEGG Report	hsa:2595	UniProtKB/Swiss-Prot
NCBI Gene	2595	ENTREZGENE
OMIM	104180	OMIM
PANTHER	ALPHA-GLUCOSIDASE	UniProtKB/Swiss-Prot
	NEUTRAL ALPHA-GLUCOSIDASE C	UniProtKB/Swiss-Prot
Pfam	Gal_mutarotas_2	UniProtKB/Swiss-Prot
	Glyco_hydro_31	UniProtKB/Swiss-Prot
	Glyco_hydro_31_3rd	UniProtKB/Swiss-Prot
PharmGKB	PA28552	PharmGKB
PROSITE	GLYCOSYL_HYDROL_F31_1	UniProtKB/Swiss-Prot
Superfamily-SCOP	Glycosyl hydrolase domain	UniProtKB/Swiss-Prot
	SSF51445	UniProtKB/Swiss-Prot
	SSF74650	UniProtKB/Swiss-Prot
UniProt	A0A0G2JLA2_HUMAN	UniProtKB/TrEMBL
	B4DWC5	ENTREZGENE, UniProtKB/TrEMBL
	E7EWB6	ENTREZGENE, UniProtKB/TrEMBL
	GANC_HUMAN	UniProtKB/Swiss-Prot
	H3BMM3_HUMAN	UniProtKB/TrEMBL
	H3BMW3_HUMAN	UniProtKB/TrEMBL
	H3BN99	ENTREZGENE, UniProtKB/TrEMBL
	H3BRQ6_HUMAN	UniProtKB/TrEMBL
	Q2M2A3	ENTREZGENE, UniProtKB/TrEMBL
	Q52LQ4	ENTREZGENE
	Q8IWZ0	ENTREZGENE
	Q8IZM4	ENTREZGENE
	Q8IZM5	ENTREZGENE
	Q8TET4	ENTREZGENE
UniProt Secondary	Q52LQ4	UniProtKB/Swiss-Prot
	Q8IWZ0	UniProtKB/Swiss-Prot
	Q8IZM4	UniProtKB/Swiss-Prot
	Q8IZM5	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-04	GANC	glucosidase alpha, neutral C	GANC	glucosidase, alpha; neutral C	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Send us a Message

Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)