NR2C1 (nuclear receptor subfamily 2 group C member 1) - Rat Genome Database

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Gene: NR2C1 (nuclear receptor subfamily 2 group C member 1) Homo sapiens
Analyze
Symbol: NR2C1
Name: nuclear receptor subfamily 2 group C member 1
RGD ID: 1344559
HGNC Page HGNC:7971
Description: Enables sequence-specific double-stranded DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in chromatin.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: nuclear receptor subfamily 2, group C isoform; nuclear receptor subfamily 2, group C, member 1; orphan nuclear receptor TR2; testicular nuclear receptor 2 variant 1; testicular nuclear receptor 2 variant 2; testicular receptor 2; TR2; TR2 nuclear hormone receptor
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381295,020,229 - 95,073,618 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1295,020,229 - 95,073,628 (-)EnsemblGRCh38hg38GRCh38
GRCh371295,414,005 - 95,467,394 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361293,939,802 - 93,991,487 (-)NCBINCBI36Build 36hg18NCBI36
Build 341293,918,138 - 93,969,676NCBI
Celera1295,085,340 - 95,138,686 (-)NCBICelera
Cytogenetic Map12q22NCBI
HuRef1292,481,137 - 92,534,428 (-)NCBIHuRef
CHM1_11295,378,558 - 95,432,374 (-)NCBICHM1_1
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:2597158   PMID:3421977   PMID:9704569   PMID:9737983   PMID:9795341   PMID:11463856   PMID:12093744   PMID:12093804   PMID:12361719   PMID:12477932   PMID:12615366   PMID:12943985  
PMID:12949936   PMID:14521922   PMID:16344560   PMID:17010934   PMID:17974920   PMID:19204783   PMID:19274049   PMID:20379614   PMID:21360626   PMID:21670149   PMID:21873635   PMID:21900206  
PMID:22544055   PMID:26469385   PMID:28473536   PMID:28794006   PMID:29656893   PMID:30415952   PMID:30463901   PMID:30804394   PMID:32296183   PMID:33916271   PMID:33961781   PMID:34079125  
PMID:34189442   PMID:34672954   PMID:34795231   PMID:35140242   PMID:35914814   PMID:36089195   PMID:36373674   PMID:36591938   PMID:37689310   PMID:38297188  


Genomics

Comparative Map Data
NR2C1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381295,020,229 - 95,073,618 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1295,020,229 - 95,073,628 (-)EnsemblGRCh38hg38GRCh38
GRCh371295,414,005 - 95,467,394 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361293,939,802 - 93,991,487 (-)NCBINCBI36Build 36hg18NCBI36
Build 341293,918,138 - 93,969,676NCBI
Celera1295,085,340 - 95,138,686 (-)NCBICelera
Cytogenetic Map12q22NCBI
HuRef1292,481,137 - 92,534,428 (-)NCBIHuRef
CHM1_11295,378,558 - 95,432,374 (-)NCBICHM1_1
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBIT2T-CHM13v2.0
Nr2c1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391093,983,491 - 94,033,078 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1093,983,885 - 94,033,073 (+)EnsemblGRCm39 Ensembl
GRCm381094,147,542 - 94,197,216 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1094,148,023 - 94,197,211 (+)EnsemblGRCm38mm10GRCm38
MGSCv371093,610,676 - 93,659,959 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361093,586,085 - 93,625,150 (+)NCBIMGSCv36mm8
Celera1096,123,279 - 96,172,755 (+)NCBICelera
Cytogenetic Map10C2NCBI
cM Map1048.81NCBI
Nr2c1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8730,602,338 - 30,655,610 (+)NCBIGRCr8
mRatBN7.2728,715,347 - 28,768,624 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl728,715,562 - 28,767,160 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx730,713,646 - 30,765,220 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0732,875,895 - 32,927,468 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0732,646,428 - 32,698,239 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0735,069,807 - 35,122,810 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl735,069,814 - 35,122,796 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0735,137,598 - 35,189,641 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4731,293,180 - 31,345,189 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1731,313,973 - 31,365,460 (+)NCBI
Celera725,816,321 - 25,858,083 (+)NCBICelera
Cytogenetic Map7q13NCBI
Nr2c1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540531,635,113 - 31,691,465 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540531,637,832 - 31,693,621 (-)NCBIChiLan1.0ChiLan1.0
NR2C1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210103,094,441 - 103,146,827 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112103,090,832 - 103,144,945 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01292,611,459 - 92,664,405 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11296,007,293 - 96,060,878 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1296,007,293 - 96,060,878 (-)Ensemblpanpan1.1panPan2
NR2C1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11535,003,658 - 35,049,812 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1535,005,066 - 35,038,968 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1535,390,524 - 35,436,592 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01535,668,122 - 35,714,259 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1535,668,136 - 35,714,227 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11534,941,455 - 34,987,561 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01535,036,660 - 35,082,732 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01535,299,269 - 35,345,360 (-)NCBIUU_Cfam_GSD_1.0
Nr2c1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494524,915,800 - 24,968,872 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650711,264,737 - 11,319,642 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650711,266,408 - 11,319,642 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR2C1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl588,231,274 - 88,277,997 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1588,231,180 - 88,278,803 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2592,480,138 - 92,527,231 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NR2C1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11190,430,307 - 90,481,269 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1190,430,194 - 90,481,493 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037154,685,782 - 154,738,815 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nr2c1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475011,981,783 - 12,023,282 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475011,972,826 - 12,022,603 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NR2C1
29 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 copy number gain See cases [RCV000139555] Chr12:121271..133196807 [GRCh38]
Chr12:282465..133773393 [GRCh37]
Chr12:100698..132283466 [NCBI36]
Chr12:12p13.33-q24.33
pathogenic
GRCh38/hg38 12q21.33-24.11(chr12:91044318-109133210)x3 copy number gain See cases [RCV000142447] Chr12:91044318..109133210 [GRCh38]
Chr12:91438095..109571015 [GRCh37]
Chr12:89962226..108055398 [NCBI36]
Chr12:12q21.33-24.11
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 copy number gain See cases [RCV000258805] Chr12:1..133851895 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic|likely pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 copy number gain See cases [RCV000510482] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) copy number gain See cases [RCV000511643] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
NM_003297.4(NR2C1):c.1382G>C (p.Ser461Thr) single nucleotide variant not specified [RCV004311295] Chr12:95031360 [GRCh38]
Chr12:95425136 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.952G>C (p.Gly318Arg) single nucleotide variant not specified [RCV004326457] Chr12:95051775 [GRCh38]
Chr12:95445551 [GRCh37]
Chr12:12q22
uncertain significance
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 copy number gain not provided [RCV000750246] Chr12:191619..133777645 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 copy number gain not provided [RCV000750253] Chr12:621220..133779118 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12q21.33-22(chr12:91621655-96014946)x1 copy number loss not provided [RCV000737994] Chr12:91621655..96014946 [GRCh37]
Chr12:12q21.33-22
uncertain significance
GRCh37/hg19 12q22-23.2(chr12:94881995-103635998)x3 copy number gain not provided [RCV000750524] Chr12:94881995..103635998 [GRCh37]
Chr12:12q22-23.2
pathogenic
GRCh37/hg19 12q22(chr12:95467354-95548473)x1 copy number loss not provided [RCV000750527] Chr12:95467354..95548473 [GRCh37]
Chr12:12q22
benign
NM_003297.4(NR2C1):c.1244A>T (p.Gln415Leu) single nucleotide variant not specified [RCV004307300] Chr12:95040485 [GRCh38]
Chr12:95434261 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.544+1G>C single nucleotide variant Flexion contracture [RCV001007799] Chr12:95058309 [GRCh38]
Chr12:95452085 [GRCh37]
Chr12:12q22
likely pathogenic
NM_003297.4(NR2C1):c.973G>A (p.Asp325Asn) single nucleotide variant not specified [RCV004087994] Chr12:95049226 [GRCh38]
Chr12:95443002 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.164G>A (p.Ser55Asn) single nucleotide variant not specified [RCV004171121] Chr12:95062629 [GRCh38]
Chr12:95456405 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.515G>C (p.Arg172Thr) single nucleotide variant not specified [RCV004135014] Chr12:95058339 [GRCh38]
Chr12:95452115 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.1186T>A (p.Ser396Thr) single nucleotide variant not specified [RCV004172165] Chr12:95040543 [GRCh38]
Chr12:95434319 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.155C>G (p.Ser52Cys) single nucleotide variant not specified [RCV004172703] Chr12:95062638 [GRCh38]
Chr12:95456414 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.985A>G (p.Lys329Glu) single nucleotide variant not specified [RCV004106924] Chr12:95049214 [GRCh38]
Chr12:95442990 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.658A>G (p.Thr220Ala) single nucleotide variant not specified [RCV004092183] Chr12:95057765 [GRCh38]
Chr12:95451541 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.676G>C (p.Asp226His) single nucleotide variant not specified [RCV004109634] Chr12:95057747 [GRCh38]
Chr12:95451523 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.719T>C (p.Met240Thr) single nucleotide variant not specified [RCV004109635] Chr12:95057617 [GRCh38]
Chr12:95451393 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.1052A>G (p.His351Arg) single nucleotide variant not specified [RCV004242976] Chr12:95049147 [GRCh38]
Chr12:95442923 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.704T>C (p.Leu235Pro) single nucleotide variant not specified [RCV004210510] Chr12:95057632 [GRCh38]
Chr12:95451408 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.697A>G (p.Thr233Ala) single nucleotide variant not specified [RCV004196535] Chr12:95057639 [GRCh38]
Chr12:95451415 [GRCh37]
Chr12:12q22
likely benign
NM_003297.4(NR2C1):c.641G>A (p.Arg214His) single nucleotide variant not specified [RCV004133753] Chr12:95057782 [GRCh38]
Chr12:95451558 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.119A>T (p.Gln40Leu) single nucleotide variant not specified [RCV004255939] Chr12:95062674 [GRCh38]
Chr12:95456450 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.188A>G (p.Asp63Gly) single nucleotide variant not specified [RCV004339686] Chr12:95062605 [GRCh38]
Chr12:95456381 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.113A>G (p.Asn38Ser) single nucleotide variant not specified [RCV004075737] Chr12:95062680 [GRCh38]
Chr12:95456456 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.109C>T (p.His37Tyr) single nucleotide variant not specified [RCV004249924] Chr12:95062684 [GRCh38]
Chr12:95456460 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.1032G>A (p.Ala344=) single nucleotide variant not provided [RCV003391947] Chr12:95049167 [GRCh38]
Chr12:95442943 [GRCh37]
Chr12:12q22
likely benign
NM_003297.4(NR2C1):c.798G>T (p.Gln266His) single nucleotide variant not specified [RCV004491258] Chr12:95051929 [GRCh38]
Chr12:95445705 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.709G>C (p.Asp237His) single nucleotide variant not specified [RCV004491257] Chr12:95057627 [GRCh38]
Chr12:95451403 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.259C>T (p.Pro87Ser) single nucleotide variant not specified [RCV004491256] Chr12:95062534 [GRCh38]
Chr12:95456310 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.94G>C (p.Val32Leu) single nucleotide variant not specified [RCV004491260] Chr12:95062699 [GRCh38]
Chr12:95456475 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.899G>A (p.Ser300Asn) single nucleotide variant not specified [RCV004491259] Chr12:95051828 [GRCh38]
Chr12:95445604 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.1309G>A (p.Gly437Ser) single nucleotide variant not specified [RCV004491254] Chr12:95031433 [GRCh38]
Chr12:95425209 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.12A>G (p.Ile4Met) single nucleotide variant not specified [RCV004491253] Chr12:95067373 [GRCh38]
Chr12:95461149 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.604G>A (p.Ala202Thr) single nucleotide variant not specified [RCV004650375] Chr12:95057819 [GRCh38]
Chr12:95451595 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.190T>G (p.Ser64Ala) single nucleotide variant not specified [RCV004650376] Chr12:95062603 [GRCh38]
Chr12:95456379 [GRCh37]
Chr12:12q22
uncertain significance
NM_003297.4(NR2C1):c.1381A>G (p.Ser461Gly) single nucleotide variant not specified [RCV004650377] Chr12:95031361 [GRCh38]
Chr12:95425137 [GRCh37]
Chr12:12q22
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2259
Count of miRNA genes:963
Interacting mature miRNAs:1125
Transcripts:ENST00000330677, ENST00000333003, ENST00000393101, ENST00000545833, ENST00000546367, ENST00000546416, ENST00000547469, ENST00000547594, ENST00000548252, ENST00000548966, ENST00000549482, ENST00000549617, ENST00000551386, ENST00000551647, ENST00000552417, ENST00000552484, ENST00000552791, ENST00000552861
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1559125SPSL2_HSerum P-selectin level QTL 2 (human)2.59Serum P-selectin level1289897665115897665Human
407095328GWAS744304_Hchromosome-type aberration frequency QTL GWAS744304 (human)0.000004chromosome-type aberration frequency129502675195026752Human
407246336GWAS895312_Hneonatal abstinence syndrome QTL GWAS895312 (human)0.000007neonatal abstinence syndrome129506879495068795Human
406978214GWAS627190_Hcoronary artery disease QTL GWAS627190 (human)2e-09coronary artery disease129505251295052513Human
1643264BW195_HBody weight QTL 195 (human)0.0151Body weightBMI1289897665115897665Human
1357387BW58_HBody weight QTL 58 (human)2.30.0001Body weightfat free mass after exercise training1289438856115438856Human
1358827MULTSCL22_HMultiple sclerosis susceptibility QTL 22 (human)Multiple sclerosis susceptibility1289897665115897665Human

Markers in Region
SHGC-35295  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371295,415,742 - 95,415,947UniSTSGRCh37
Build 361293,939,873 - 93,940,078RGDNCBI36
Celera1295,087,025 - 95,087,230RGD
Cytogenetic Map12q22UniSTS
HuRef1292,482,874 - 92,483,079UniSTS
Stanford-G3 RH Map123949.0UniSTS
GeneMap99-GB4 RH Map12365.86UniSTS
Whitehead-RH Map12464.3UniSTS
NCBI RH Map12601.1UniSTS
GeneMap99-G3 RH Map123895.0UniSTS
RH102177  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371295,414,394 - 95,414,481UniSTSGRCh37
Build 361293,938,525 - 93,938,612RGDNCBI36
Celera1295,085,677 - 95,085,764RGD
Cytogenetic Map12q22UniSTS
HuRef1292,481,526 - 92,481,613UniSTS
GeneMap99-GB4 RH Map12367.07UniSTS
D12S1885  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371295,424,338 - 95,424,528UniSTSGRCh37
Build 361293,948,469 - 93,948,659RGDNCBI36
Celera1295,095,622 - 95,095,812RGD
Cytogenetic Map12q22UniSTS
HuRef1292,491,469 - 92,491,659UniSTS
Stanford-G3 RH Map123954.0UniSTS
NCBI RH Map12603.7UniSTS
GeneMap99-G3 RH Map123900.0UniSTS
WI-15851  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371295,424,213 - 95,424,337UniSTSGRCh37
Build 361293,948,344 - 93,948,468RGDNCBI36
Celera1295,095,497 - 95,095,621RGD
Cytogenetic Map12q22UniSTS
HuRef1292,491,344 - 92,491,468UniSTS
GeneMap99-GB4 RH Map12364.66UniSTS
Whitehead-RH Map12460.9UniSTS
NCBI RH Map12601.1UniSTS
REN85499  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372134,872,351 - 34,872,600UniSTSGRCh37
GRCh371295,457,745 - 95,457,983UniSTSGRCh37
Build 361293,981,876 - 93,982,114RGDNCBI36
Celera1295,129,029 - 95,129,267RGD
Celera2120,071,985 - 20,072,234UniSTS
Cytogenetic Map12q22UniSTS
HuRef2120,350,656 - 20,350,905UniSTS
STS-H68838  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371295,415,740 - 95,415,970UniSTSGRCh37
Build 361293,939,871 - 93,940,101RGDNCBI36
Celera1295,087,023 - 95,087,253RGD
Cytogenetic Map12q22UniSTS
HuRef1292,482,872 - 92,483,102UniSTS
GeneMap99-GB4 RH Map12368.68UniSTS
NCBI RH Map12604.8UniSTS
NR2C1_2654  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371295,415,578 - 95,416,235UniSTSGRCh37
Build 361293,939,709 - 93,940,366RGDNCBI36
Celera1295,086,861 - 95,087,518RGD
HuRef1292,482,710 - 92,483,367UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001032287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001127362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_003297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005269133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006719584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006719585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_245956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_429114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_944699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_944700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB307707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC011598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE676699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB266298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JQ308177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JQ308178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M21985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M29959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M29960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000330677   ⟹   ENSP00000328843
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,030,418 - 95,073,537 (-)Ensembl
Ensembl Acc Id: ENST00000333003   ⟹   ENSP00000333275
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,020,229 - 95,073,618 (-)Ensembl
Ensembl Acc Id: ENST00000393101   ⟹   ENSP00000376813
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,030,409 - 95,073,580 (-)Ensembl
Ensembl Acc Id: ENST00000545833
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,028,458 - 95,067,384 (-)Ensembl
Ensembl Acc Id: ENST00000546367
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,058,353 - 95,073,510 (-)Ensembl
Ensembl Acc Id: ENST00000546416
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,022,334 - 95,049,492 (-)Ensembl
Ensembl Acc Id: ENST00000547469   ⟹   ENSP00000446906
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,067,337 - 95,073,017 (-)Ensembl
Ensembl Acc Id: ENST00000547594
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,026,833 - 95,057,757 (-)Ensembl
Ensembl Acc Id: ENST00000548252
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,049,128 - 95,058,393 (-)Ensembl
Ensembl Acc Id: ENST00000548966
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,058,409 - 95,073,545 (-)Ensembl
Ensembl Acc Id: ENST00000549482
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,066,928 - 95,073,503 (-)Ensembl
Ensembl Acc Id: ENST00000549617
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,021,921 - 95,025,349 (-)Ensembl
Ensembl Acc Id: ENST00000551386
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,059,920 - 95,073,615 (-)Ensembl
Ensembl Acc Id: ENST00000551647   ⟹   ENSP00000450225
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,021,893 - 95,040,598 (-)Ensembl
Ensembl Acc Id: ENST00000552417
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,058,420 - 95,067,370 (-)Ensembl
Ensembl Acc Id: ENST00000552484
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,028,106 - 95,031,394 (-)Ensembl
Ensembl Acc Id: ENST00000552791   ⟹   ENSP00000446817
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,030,409 - 95,051,869 (-)Ensembl
Ensembl Acc Id: ENST00000552861
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,021,893 - 95,073,569 (-)Ensembl
Ensembl Acc Id: ENST00000622476   ⟹   ENSP00000478728
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1295,028,458 - 95,073,628 (-)Ensembl
RefSeq Acc Id: NM_001032287   ⟹   NP_001027458
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,030,409 - 95,073,618 (-)NCBI
GRCh371295,414,005 - 95,467,404 (-)NCBI
Build 361293,948,316 - 93,991,487 (-)NCBI Archive
HuRef1292,481,137 - 92,534,428 (-)NCBI
CHM1_11295,388,738 - 95,432,374 (-)NCBI
T2T-CHM13v2.01295,011,114 - 95,054,323 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001127362   ⟹   NP_001120834
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,030,409 - 95,073,618 (-)NCBI
GRCh371295,414,005 - 95,467,404 (-)NCBI
HuRef1292,481,137 - 92,534,428 (-)NCBI
CHM1_11295,388,738 - 95,432,374 (-)NCBI
T2T-CHM13v2.01295,011,114 - 95,054,323 (-)NCBI
Sequence:
RefSeq Acc Id: NM_003297   ⟹   NP_003288
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,020,229 - 95,073,618 (-)NCBI
GRCh371295,414,005 - 95,467,404 (-)NCBI
Build 361293,939,802 - 93,991,339 (-)NCBI Archive
HuRef1292,481,137 - 92,534,428 (-)NCBI
CHM1_11295,378,558 - 95,432,374 (-)NCBI
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005269133   ⟹   XP_005269190
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,020,229 - 95,073,618 (-)NCBI
GRCh371295,414,005 - 95,467,404 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006719584   ⟹   XP_006719647
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,020,229 - 95,073,618 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006719585   ⟹   XP_006719648
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,020,229 - 95,073,618 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538716   ⟹   XP_011537018
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,020,229 - 95,073,618 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538717   ⟹   XP_011537019
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,020,229 - 95,073,618 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047429494   ⟹   XP_047285450
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,020,229 - 95,073,618 (-)NCBI
RefSeq Acc Id: XM_047429495   ⟹   XP_047285451
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,020,229 - 95,073,618 (-)NCBI
RefSeq Acc Id: XM_047429496   ⟹   XP_047285452
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,028,387 - 95,073,618 (-)NCBI
RefSeq Acc Id: XM_047429497   ⟹   XP_047285453
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,031,349 - 95,073,618 (-)NCBI
RefSeq Acc Id: XM_047429499   ⟹   XP_047285455
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,040,476 - 95,073,618 (-)NCBI
RefSeq Acc Id: XM_054373118   ⟹   XP_054229093
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBI
RefSeq Acc Id: XM_054373119   ⟹   XP_054229094
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBI
RefSeq Acc Id: XM_054373120   ⟹   XP_054229095
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBI
RefSeq Acc Id: XM_054373121   ⟹   XP_054229096
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBI
RefSeq Acc Id: XM_054373122   ⟹   XP_054229097
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBI
RefSeq Acc Id: XM_054373123   ⟹   XP_054229098
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBI
RefSeq Acc Id: XM_054373124   ⟹   XP_054229099
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,000,934 - 95,054,323 (-)NCBI
RefSeq Acc Id: XM_054373125   ⟹   XP_054229100
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,009,091 - 95,054,323 (-)NCBI
RefSeq Acc Id: XM_054373126   ⟹   XP_054229101
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,012,054 - 95,054,323 (-)NCBI
RefSeq Acc Id: XM_054373127   ⟹   XP_054229102
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01295,021,178 - 95,054,323 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001027458 (Get FASTA)   NCBI Sequence Viewer  
  NP_001120834 (Get FASTA)   NCBI Sequence Viewer  
  NP_003288 (Get FASTA)   NCBI Sequence Viewer  
  XP_005269190 (Get FASTA)   NCBI Sequence Viewer  
  XP_006719647 (Get FASTA)   NCBI Sequence Viewer  
  XP_006719648 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537018 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537019 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285450 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285451 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285452 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285453 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285455 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229093 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229094 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229095 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229096 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229097 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229098 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229099 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229100 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229101 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229102 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA36650 (Get FASTA)   NCBI Sequence Viewer  
  AAA36761 (Get FASTA)   NCBI Sequence Viewer  
  AAA36762 (Get FASTA)   NCBI Sequence Viewer  
  AAH40141 (Get FASTA)   NCBI Sequence Viewer  
  AFF59487 (Get FASTA)   NCBI Sequence Viewer  
  AFF59488 (Get FASTA)   NCBI Sequence Viewer  
  BAF84008 (Get FASTA)   NCBI Sequence Viewer  
  BAH02298 (Get FASTA)   NCBI Sequence Viewer  
  EAW97517 (Get FASTA)   NCBI Sequence Viewer  
  EAW97518 (Get FASTA)   NCBI Sequence Viewer  
  EAW97519 (Get FASTA)   NCBI Sequence Viewer  
  EAW97520 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000328843
  ENSP00000328843.7
  ENSP00000333275
  ENSP00000333275.4
  ENSP00000376813
  ENSP00000376813.3
  ENSP00000446817.1
  ENSP00000446906.1
  ENSP00000450225.1
  ENSP00000478728
  ENSP00000478728.1
GenBank Protein P13056 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_003288   ⟸   NM_003297
- Peptide Label: isoform a
- UniProtKB: Q15625 (UniProtKB/Swiss-Prot),   A8K5K4 (UniProtKB/Swiss-Prot),   Q15626 (UniProtKB/Swiss-Prot),   P13056 (UniProtKB/Swiss-Prot),   H9NIM2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001027458   ⟸   NM_001032287
- Peptide Label: isoform b
- UniProtKB: H9NIM3 (UniProtKB/TrEMBL),   A0A087WUK4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001120834   ⟸   NM_001127362
- Peptide Label: isoform c
- UniProtKB: A0A087WUK4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005269190   ⟸   XM_005269133
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006719647   ⟸   XM_006719584
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006719648   ⟸   XM_006719585
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_011537019   ⟸   XM_011538717
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_011537018   ⟸   XM_011538716
- Peptide Label: isoform X3
- UniProtKB: A0A087WUK4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000478728   ⟸   ENST00000622476
Ensembl Acc Id: ENSP00000333275   ⟸   ENST00000333003
Ensembl Acc Id: ENSP00000446906   ⟸   ENST00000547469
Ensembl Acc Id: ENSP00000376813   ⟸   ENST00000393101
Ensembl Acc Id: ENSP00000450225   ⟸   ENST00000551647
Ensembl Acc Id: ENSP00000446817   ⟸   ENST00000552791
Ensembl Acc Id: ENSP00000328843   ⟸   ENST00000330677
RefSeq Acc Id: XP_047285451   ⟸   XM_047429495
- Peptide Label: isoform X6
RefSeq Acc Id: XP_047285450   ⟸   XM_047429494
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047285452   ⟸   XM_047429496
- Peptide Label: isoform X8
RefSeq Acc Id: XP_047285453   ⟸   XM_047429497
- Peptide Label: isoform X9
RefSeq Acc Id: XP_047285455   ⟸   XM_047429499
- Peptide Label: isoform X10
RefSeq Acc Id: XP_054229098   ⟸   XM_054373123
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054229097   ⟸   XM_054373122
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054229094   ⟸   XM_054373119
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054229096   ⟸   XM_054373121
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054229093   ⟸   XM_054373118
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054229095   ⟸   XM_054373120
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054229099   ⟸   XM_054373124
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054229100   ⟸   XM_054373125
- Peptide Label: isoform X8
RefSeq Acc Id: XP_054229101   ⟸   XM_054373126
- Peptide Label: isoform X9
RefSeq Acc Id: XP_054229102   ⟸   XM_054373127
- Peptide Label: isoform X10
Protein Domains
NR LBD   Nuclear receptor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P13056-F1-model_v2 AlphaFold P13056 1-603 view protein structure

Promoters
RGD ID:6790317
Promoter ID:HG_KWN:16349
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000333003,   NM_001032287,   NM_001127362,   NM_003297
Position:
Human AssemblyChrPosition (strand)Source
Build 361293,991,036 - 93,991,536 (-)MPROMDB
RGD ID:7225047
Promoter ID:EPDNEW_H18269
Type:initiation region
Name:NR2C1_1
Description:nuclear receptor subfamily 2 group C member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H18270  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,073,545 - 95,073,605EPDNEW
RGD ID:7225049
Promoter ID:EPDNEW_H18270
Type:initiation region
Name:NR2C1_2
Description:nuclear receptor subfamily 2 group C member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H18269  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381295,081,416 - 95,081,476EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:7971 AgrOrtholog
COSMIC NR2C1 COSMIC
Ensembl Genes ENSG00000120798 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000330677 ENTREZGENE
  ENST00000330677.7 UniProtKB/Swiss-Prot
  ENST00000333003 ENTREZGENE
  ENST00000333003.10 UniProtKB/Swiss-Prot
  ENST00000393101 ENTREZGENE
  ENST00000393101.7 UniProtKB/Swiss-Prot
  ENST00000547469.1 UniProtKB/TrEMBL
  ENST00000551647.5 UniProtKB/TrEMBL
  ENST00000552791.1 UniProtKB/TrEMBL
  ENST00000622476 ENTREZGENE
  ENST00000622476.4 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000120798 GTEx
HGNC ID HGNC:7971 ENTREZGENE
Human Proteome Map NR2C1 Human Proteome Map
InterPro NHR-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NR2C1/2-like_DBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NR2C1/2-like_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hormone_rcpt_NR2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:7181 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 7181 ENTREZGENE
OMIM 601529 OMIM
PANTHER NUCLEAR HORMONE RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR RECEPTOR SUBFAMILY 2 GROUP C MEMBER 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Hormone_recep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA31754 PharmGKB
PRINTS STRDHORMONER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOLI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WUK4 ENTREZGENE, UniProtKB/TrEMBL
  A8K5K4 ENTREZGENE
  B6ZGT7_HUMAN UniProtKB/TrEMBL
  F8W1Q1_HUMAN UniProtKB/TrEMBL
  H0YHC6_HUMAN UniProtKB/TrEMBL
  H0YIV1_HUMAN UniProtKB/TrEMBL
  H9NIM2 ENTREZGENE, UniProtKB/TrEMBL
  H9NIM3 ENTREZGENE, UniProtKB/TrEMBL
  NR2C1_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q15625 ENTREZGENE
  Q15626 ENTREZGENE
UniProt Secondary A8K5K4 UniProtKB/Swiss-Prot
  Q15625 UniProtKB/Swiss-Prot
  Q15626 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 NR2C1  nuclear receptor subfamily 2 group C member 1  NR2C1  nuclear receptor subfamily 2, group C, member 1  Symbol and/or name change 5135510 APPROVED