MMGT1 (membrane magnesium transporter 1) - Rat Genome Database

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Gene: MMGT1 (membrane magnesium transporter 1) Homo sapiens
Analyze
Symbol: MMGT1
Name: membrane magnesium transporter 1
RGD ID: 1343591
HGNC Page HGNC:28100
Description: Contributes to membrane insertase activity. Involved in protein insertion into ER membrane by stop-transfer membrane-anchor sequence and tail-anchored membrane protein insertion into ER membrane. Located in endoplasmic reticulum membrane. Part of EMC complex.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: EMC5; ER membrane protein complex subunit 5; TMEM32; transmembrane protein 32
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X135,960,588 - 135,973,988 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX135,960,588 - 135,974,029 (-)EnsemblGRCh38hg38GRCh38
GRCh37X135,042,747 - 135,056,147 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X134,871,897 - 134,883,800 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X134,769,750 - 134,781,654NCBI
CeleraX135,404,702 - 135,416,609 (-)NCBICelera
Cytogenetic MapXq26.3NCBI
HuRefX124,318,172 - 124,329,831 (-)NCBIHuRef
CHM1_1X134,955,293 - 134,967,204 (-)NCBICHM1_1
T2T-CHM13v2.0X134,269,310 - 134,282,721 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MMGT1Humanautistic disorder  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311
MMGT1Humanautosomal hemophilia A  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: AUTOSOMAL HEMOPHILIA AClinVarPMID:31690835
MMGT1Humanfactor VIII deficiency  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Factor 8 deficiency and congenitalClinVarPMID:31690835
MMGT1Humansyndromic X-linked intellectual disability Lubs type  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs typeClinVarPMID:25741868

1 to 20 of 55 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MMGT1Human1,2-dimethylhydrazine decreases expressionISOMmgt1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of MMGT1 mRNACTDPMID:22206623
MMGT1Human1,2-dimethylhydrazine multiple interactionsISOMmgt1 (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in decreased expression of MMGT1 mRNA]CTDPMID:22206623
MMGT1Human17alpha-ethynylestradiol increases expressionISOMmgt1 (Rattus norvegicus)6480464Ethinyl Estradiol results in increased expression of MMGT1 mRNACTDPMID:29097150
MMGT1Human2,2',4,4'-Tetrabromodiphenyl ether increases expressionISOMmgt1 (Rattus norvegicus)64804642 more ...CTDPMID:27291303 more ...
MMGT1Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOMmgt1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of MMGT1 mRNACTDPMID:19465110 and PMID:28213091
MMGT1Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOMmgt1 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of MMGT1 mRNACTDPMID:33387578
MMGT1Human2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOMmgt1 (Mus musculus)6480464[TIPARP gene mutant form results in increased susceptibility to Tetrachlorodibenzodioxin] which results in decreased expression of MMGT1 mRNACTDPMID:25975270
MMGT1Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOMmgt1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of MMGT1 mRNACTDPMID:21570461
MMGT1Human3,4-methylenedioxymethamphetamine increases expressionISOMmgt1 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of MMGT1 mRNACTDPMID:20188158
MMGT1Human3-isobutyl-1-methyl-7H-xanthine multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of MMGT1 mRNACTDPMID:28628672
MMGT1Humanall-trans-retinoic acid decreases expressionEXP 6480464Tretinoin results in decreased expression of MMGT1 mRNACTDPMID:33167477
MMGT1Humanbenzo[a]pyrene increases expressionISOMmgt1 (Mus musculus)6480464Benzo(a)pyrene results in increased expression of MMGT1 mRNACTDPMID:22228805
MMGT1Humanbenzo[a]pyrene decreases methylationEXP 6480464Benzo(a)pyrene results in decreased methylation of MMGT1 3' UTRCTDPMID:27901495
MMGT1Humanbenzo[a]pyrene affects methylationEXP 6480464Benzo(a)pyrene affects the methylation of MMGT1 exon and Benzo(a)pyrene affects the methylation of MMGT1 promoterCTDPMID:27901495
MMGT1Humanbisphenol A affects expressionISOMmgt1 (Rattus norvegicus)6480464bisphenol A affects the expression of MMGT1 mRNACTDPMID:25181051
MMGT1Humanbisphenol F multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in increased expression of MMGT1 mRNACTDPMID:28628672
MMGT1Humanbisphenol F increases expressionISOMmgt1 (Mus musculus)6480464bisphenol F results in increased expression of MMGT1 mRNACTDPMID:38685157
MMGT1Humancaffeine decreases phosphorylationEXP 6480464Caffeine results in decreased phosphorylation of MMGT1 proteinCTDPMID:35688186
MMGT1Humancarbon nanotube decreases expressionISOMmgt1 (Mus musculus)6480464Nanotubes and Carbon results in decreased expression of MMGT1 mRNACTDPMID:25554681
MMGT1Humancholine multiple interactionsISOMmgt1 (Mus musculus)6480464[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of MMGT1 geneCTDPMID:20938992

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Biological Process
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MMGT1Humancobalt ion transport acts_upstream_of_or_withinIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humancopper ion transport acts_upstream_of_or_withinIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humaniron ion transmembrane transport involved_inIEAGO:0015093150520179 GOCGO_REF:0000108
MMGT1Humaniron ion transport acts_upstream_of_or_withinIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humanmagnesium ion transmembrane transport involved_inIEAGO:0015095150520179 GOCGO_REF:0000108
MMGT1Humanmagnesium ion transport involved_inISSUniProtKB:Q8K273150520179 UniProtGO_REF:0000024
MMGT1Humanmagnesium ion transport acts_upstream_of_or_withinIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humanmonoatomic cation transport acts_upstream_of_or_withinIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humanprotein insertion into ER membrane by stop-transfer membrane-anchor sequence involved_inIDA 150520179 PMID:29242231ComplexPortalPMID:29242231
MMGT1Humanprotein insertion into ER membrane by stop-transfer membrane-anchor sequence involved_inIMP 150520179 PMID:29809151 and PMID:30415835UniProtPMID:29809151 and PMID:30415835
MMGT1Humantail-anchored membrane protein insertion into ER membrane involved_inIDA 150520179 PMID:29242231ComplexPortalPMID:29242231
MMGT1Humantail-anchored membrane protein insertion into ER membrane involved_inIMP 150520179 PMID:29242231 and PMID:34918864UniProtPMID:29242231 and PMID:34918864
1 to 12 of 12 rows

Cellular Component
1 to 20 of 31 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MMGT1Humancytoplasm located_inIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humancytoplasm located_inIEAARBA:ARBA00026971150520179 UniProtGO_REF:0000117
MMGT1Humanearly endosome located_inIEAUniRule:UR001325752150520179 UniProtGO_REF:0000104
MMGT1Humanearly endosome is_active_inIBAMGI:2384305 more ...150520179 GO_CentralGO_REF:0000033
MMGT1Humanearly endosome located_inISSUniProtKB:Q8K273150520179 UniProtGO_REF:0000024
MMGT1Humanearly endosome located_inIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humanearly endosome membrane located_inIEAUniRule:UR001325752150520179 UniProtGO_REF:0000104
MMGT1Humanearly endosome membrane located_inIEAUniProtKB-SubCell:SL-0093150520179 UniProtGO_REF:0000044
MMGT1HumanEMC complex part_ofIPI 150520179 PMID:32439656ComplexPortalPMID:32439656
MMGT1HumanEMC complex part_ofIBAPANTHER:PTN000475936 and UniProtKB:Q8N4V1150520179 GO_CentralGO_REF:0000033
MMGT1HumanEMC complex part_ofIDA 150520179 PMID:22119785UniProtPMID:22119785
MMGT1HumanEMC complex part_ofIEAUniRule:UR001325752150520179 UniProtGO_REF:0000104
MMGT1HumanEMC complex part_ofISSComplexPortal:CPX-5848150520179 ComplexPortalGO_REF:0000114
MMGT1Humanendoplasmic reticulum located_inIEAUniProtKB-KW:KW-0256150520179 UniProtGO_REF:0000043
MMGT1Humanendoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-0097150520179 UniProtGO_REF:0000044
MMGT1Humanendoplasmic reticulum membrane located_inNAS 150520179 PMID:29242231ComplexPortalPMID:29242231
MMGT1Humanendoplasmic reticulum membrane located_inIDA 150520179 PMID:32439656UniProtPMID:32439656
MMGT1Humanendosome located_inIEAUniProtKB-KW:KW-0967150520179 UniProtGO_REF:0000043
MMGT1HumanGolgi apparatus located_inIEAUniProtKB-KW:KW-0333150520179 UniProtGO_REF:0000043
MMGT1HumanGolgi apparatus is_active_inIBAMGI:2384305 more ...150520179 GO_CentralGO_REF:0000033
1 to 20 of 31 rows

Molecular Function
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MMGT1Humancobalt ion transmembrane transporter activity enablesIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humanferrous iron transmembrane transporter activity enablesIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humaninorganic cation transmembrane transporter activity enablesIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humaninorganic cation transmembrane transporter activity enablesIBAMGI:2384305 more ...150520179 GO_CentralGO_REF:0000033
MMGT1Humanmagnesium ion transmembrane transporter activity enablesISSUniProtKB:Q8K273150520179 UniProtGO_REF:0000024
MMGT1Humanmagnesium ion transmembrane transporter activity enablesIEAUniProtKB:Q8K273 and ensembl:ENSMUSP00000051621150520179 EnsemblGO_REF:0000107
MMGT1Humanmembrane insertase activity contributes_toIMP 150520179 PMID:29809151 more ...UniProtPMID:29809151 more ...
MMGT1Humanprotein binding enablesIPIUniProtKB:Q15006 and UniProtKB:Q9BV81150520179 PMID:22119785 more ...IntActPMID:22119785 more ...
MMGT1Humanprotein binding enablesIPIUniProtKB:O00155 more ...150520179 PMID:32296183IntActPMID:32296183
MMGT1Humanprotein binding enablesIPIUniProtKB:Q15006150520179 PMID:26496610 and PMID:28514442IntActPMID:26496610 and PMID:28514442
MMGT1Humanprotein binding enablesIPIUniProtKB:O95167 and UniProtKB:Q15006150520179 PMID:35271311IntActPMID:35271311
1 to 11 of 11 rows

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MMGT1HumanAutism  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311

#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
PMID:11076863   PMID:11230166   PMID:11256614   PMID:15489336   PMID:16344560   PMID:16381901   PMID:18057121   PMID:19322201   PMID:19946888   PMID:21832049   PMID:21873635   PMID:22119785  
PMID:22190034   PMID:22939629   PMID:25437307   PMID:26186194   PMID:26496610   PMID:26638075   PMID:26972000   PMID:27342126   PMID:28514442   PMID:28515276   PMID:28692057   PMID:29128334  
PMID:29242231   PMID:29395067   PMID:29509190   PMID:29568061   PMID:29809151   PMID:30021884   PMID:30194290   PMID:30232004   PMID:30415835   PMID:31056421   PMID:31177093   PMID:31266804  
PMID:31536960   PMID:31732153   PMID:31839598   PMID:31871319   PMID:32296183   PMID:32344865   PMID:32439656   PMID:32788342   PMID:32877691   PMID:33263384   PMID:33957083   PMID:33961781  
PMID:34079125   PMID:34349018   PMID:34597346   PMID:34672954   PMID:34709727   PMID:34918864   PMID:35271311   PMID:35384245   PMID:35696571   PMID:35944360   PMID:36215168   PMID:36538041  
PMID:36610398   PMID:37478010   PMID:37774976   PMID:37788672   PMID:37931956   PMID:38334954   PMID:38569033   PMID:39468006  



MMGT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X135,960,588 - 135,973,988 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX135,960,588 - 135,974,029 (-)EnsemblGRCh38hg38GRCh38
GRCh37X135,042,747 - 135,056,147 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X134,871,897 - 134,883,800 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X134,769,750 - 134,781,654NCBI
CeleraX135,404,702 - 135,416,609 (-)NCBICelera
Cytogenetic MapXq26.3NCBI
HuRefX124,318,172 - 124,329,831 (-)NCBIHuRef
CHM1_1X134,955,293 - 134,967,204 (-)NCBICHM1_1
T2T-CHM13v2.0X134,269,310 - 134,282,721 (-)NCBIT2T-CHM13v2.0
Mmgt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X55,630,872 - 55,643,304 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX55,630,872 - 55,643,429 (-)EnsemblGRCm39 Ensembl
GRCm38X56,585,512 - 56,597,944 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX56,585,512 - 56,598,069 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X53,838,689 - 53,851,096 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X52,932,296 - 52,944,703 (-)NCBIMGSCv36mm8
CeleraX43,067,520 - 43,079,927 (-)NCBICelera
Cytogenetic MapXA5NCBI
cM MapX30.06NCBI
Mmgt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X139,445,834 - 139,458,169 (-)NCBIGRCr8
mRatBN7.2X134,408,463 - 134,420,798 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX134,408,466 - 134,420,729 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX136,605,407 - 136,617,742 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X140,159,968 - 140,172,303 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X137,729,350 - 137,741,685 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X158,966,694 - 158,978,995 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX158,966,673 - 158,978,995 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X153,597,936 - 153,610,237 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X141,123,953 - 141,136,288 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX142,458,978 - 142,471,313 (-)NCBICelera
Cytogenetic MapXq36NCBI
Mmgt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554899,086,506 - 9,096,746 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554899,086,494 - 9,133,374 (+)NCBIChiLan1.0ChiLan1.0
MMGT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X135,375,314 - 135,387,480 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X135,378,913 - 135,391,079 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X125,086,169 - 125,098,878 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X135,354,785 - 135,366,838 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX135,354,785 - 135,366,836 (-)Ensemblpanpan1.1panPan2
MMGT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X106,388,286 - 106,399,166 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX92,208,405 - 92,219,240 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X108,365,094 - 108,375,929 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX108,363,610 - 108,376,441 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X105,502,517 - 105,513,352 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X107,686,189 - 107,697,025 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X107,334,890 - 107,345,725 (-)NCBIUU_Cfam_GSD_1.0
Mmgt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X104,375,461 - 104,385,288 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493651311,229,506 - 11,239,525 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493651311,229,354 - 11,239,152 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MMGT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX111,144,233 - 111,158,335 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X111,145,712 - 111,158,298 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X127,067,831 - 127,080,417 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MMGT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X110,976,376 - 110,986,917 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606548,640,974 - 48,652,825 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mmgt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462480811,174,966 - 11,196,288 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in MMGT1
12 total Variants

1 to 10 of 213 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 Xp22.33-q28(chrX:10701-156003242)x3 copy number gain See cases [RCV000133911] ChrX:10701..156003242 [GRCh38]
ChrX:60701..155232907 [GRCh37]
ChrX:701..154886101 [NCBI36]
ChrX:Xp22.33-q28
pathogenic|likely pathogenic|conflicting data from submitters
GRCh38/hg38 Xp22.33-q28(chrX:3092486-155699618)x2 copy number gain See cases [RCV000050889] ChrX:3092486..155699618 [GRCh38]
ChrX:3010527..154929279 [GRCh37]
ChrX:3020527..154582473 [NCBI36]
ChrX:Xp22.33-q28
pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:20140-155699618)x3 copy number gain See cases [RCV000050810] ChrX:20140..155699618 [GRCh38]
ChrX:70140..154929279 [GRCh37]
ChrX:10140..154582473 [NCBI36]
ChrX:Xp22.33-q28
pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x3 copy number gain See cases [RCV000050697] ChrX:10679..156022206 [GRCh38]
ChrX:60679..155251871 [GRCh37]
ChrX:679..154905065 [NCBI36]
ChrX:Xp22.33-q28
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters
GRCh38/hg38 Xp11.21-q28(chrX:57372584-155996431)x1 copy number loss See cases [RCV000051665] ChrX:57372584..155996431 [GRCh38]
ChrX:57399017..155226096 [GRCh37]
ChrX:57415742..154879290 [NCBI36]
ChrX:Xp11.21-q28
pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:20140-155699618)x1 copy number loss See cases [RCV000050811] ChrX:20140..155699618 [GRCh38]
ChrX:70140..154929279 [GRCh37]
ChrX:10140..154582473 [NCBI36]
ChrX:Xp22.33-q28
pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x1 copy number loss See cases [RCV000050699] ChrX:10679..156022206 [GRCh38]
ChrX:60679..155251871 [GRCh37]
ChrX:679..154905065 [NCBI36]
ChrX:Xp22.33-q28
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000050385]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000050385]|See cases [RCV000050385] ChrX:10679..156013167 [GRCh38]
ChrX:60679..155242832 [GRCh37]
ChrX:Xp22.33-q28
pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x1 copy number loss Global developmental delay [RCV000050386]|See cases [RCV000050386] ChrX:10679..156013167 [GRCh38]
ChrX:60679..155242832 [GRCh37]
ChrX:Xp22.33-q28
pathogenic
GRCh38/hg38 Xq23-28(chrX:115417992-156022206)x1 copy number loss See cases [RCV000051160] ChrX:115417992..156022206 [GRCh38]
ChrX:114652461..155251871 [GRCh37]
ChrX:114558717..154905065 [NCBI36]
ChrX:Xq23-28
pathogenic
1 to 10 of 213 rows

Predicted Target Of
Summary Value
Count of predictions:2137
Count of miRNA genes:663
Interacting mature miRNAs:745
Transcripts:ENST00000305963, ENST00000433339
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

D13S1134E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X135,047,187 - 135,047,254UniSTSGRCh37
Build 36X134,874,853 - 134,874,920RGDNCBI36
CeleraX135,407,658 - 135,407,725RGD
Cytogenetic MapXq26.3UniSTS
HuRefX124,321,129 - 124,321,196UniSTS
A005K16  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X135,044,275 - 135,044,449UniSTSGRCh37
Build 36X134,871,941 - 134,872,115RGDNCBI36
CeleraX135,404,746 - 135,404,920RGD
Cytogenetic MapXq26.3UniSTS
HuRefX124,318,216 - 124,318,390UniSTS
GeneMap99-GB4 RH MapX320.11UniSTS
NCBI RH MapX685.3UniSTS
G20282  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X135,044,275 - 135,044,449UniSTSGRCh37
Build 36X134,871,941 - 134,872,115RGDNCBI36
CeleraX135,404,746 - 135,404,920RGD
Cytogenetic MapXq26.3UniSTS
HuRefX124,318,216 - 124,318,390UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2435 2788 2251 4972 1726 2351 6 623 1951 465 2269 7298 6468 53 3734 851 1742 1616 175 1



Ensembl Acc Id: ENST00000305963   ⟹   ENSP00000306220
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX135,960,588 - 135,973,988 (-)Ensembl
Ensembl Acc Id: ENST00000679621   ⟹   ENSP00000505226
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX135,964,678 - 135,974,029 (-)Ensembl
Ensembl Acc Id: ENST00000680510   ⟹   ENSP00000505521
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX135,962,152 - 135,974,013 (-)Ensembl
Ensembl Acc Id: ENST00000681201   ⟹   ENSP00000506673
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX135,963,173 - 135,973,684 (-)Ensembl
RefSeq Acc Id: NM_001330000   ⟹   NP_001316929
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X135,960,588 - 135,973,988 (-)NCBI
T2T-CHM13v2.0X134,269,310 - 134,282,721 (-)NCBI
Sequence:
RefSeq Acc Id: NM_173470   ⟹   NP_775741
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X135,960,588 - 135,973,988 (-)NCBI
GRCh37X135,044,230 - 135,056,224 (-)NCBI
Build 36X134,871,897 - 134,883,800 (-)NCBI Archive
CeleraX135,404,702 - 135,416,609 (-)RGD
HuRefX124,318,172 - 124,329,831 (-)RGD
CHM1_1X134,955,293 - 134,967,204 (-)NCBI
T2T-CHM13v2.0X134,269,310 - 134,282,721 (-)NCBI
Sequence:
1 to 13 of 13 rows
Protein RefSeqs NP_001316929 (Get FASTA)   NCBI Sequence Viewer  
  NP_775741 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH33588 (Get FASTA)   NCBI Sequence Viewer  
  BAG35322 (Get FASTA)   NCBI Sequence Viewer  
  BAG58645 (Get FASTA)   NCBI Sequence Viewer  
  EAW88483 (Get FASTA)   NCBI Sequence Viewer  
  EAW88484 (Get FASTA)   NCBI Sequence Viewer  
  EAW88485 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000306220
  ENSP00000306220.2
  ENSP00000505226
  ENSP00000505226.1
GenBank Protein Q8N4V1 (Get FASTA)   NCBI Sequence Viewer  
1 to 13 of 13 rows
RefSeq Acc Id: NP_775741   ⟸   NM_173470
- UniProtKB: D3DWG7 (UniProtKB/Swiss-Prot),   B4DIY3 (UniProtKB/Swiss-Prot),   B2R625 (UniProtKB/Swiss-Prot),   Q5JPP7 (UniProtKB/Swiss-Prot),   Q8N4V1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001316929   ⟸   NM_001330000
- UniProtKB: D3DWG7 (UniProtKB/Swiss-Prot),   B4DIY3 (UniProtKB/Swiss-Prot),   B2R625 (UniProtKB/Swiss-Prot),   Q5JPP7 (UniProtKB/Swiss-Prot),   Q8N4V1 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSP00000306220   ⟸   ENST00000305963
Ensembl Acc Id: ENSP00000506673   ⟸   ENST00000681201
Ensembl Acc Id: ENSP00000505226   ⟸   ENST00000679621

Name Modeler Protein Id AA Range Protein Structure
AF-Q8N4V1-F1-model_v2 AlphaFold Q8N4V1 1-131 view protein structure

RGD ID:6809046
Promoter ID:HG_KWN:68183
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000058453
Position:
Human AssemblyChrPosition (strand)Source
Build 36X134,883,596 - 134,884,582 (-)MPROMDB
RGD ID:13628194
Promoter ID:EPDNEW_H29372
Type:initiation region
Name:MMGT1_2
Description:membrane magnesium transporter 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H29373  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X135,973,755 - 135,973,815EPDNEW
RGD ID:13628196
Promoter ID:EPDNEW_H29373
Type:initiation region
Name:MMGT1_1
Description:membrane magnesium transporter 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H29372  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X135,973,988 - 135,974,048EPDNEW


1 to 29 of 29 rows
Database
Acc Id
Source(s)
COSMIC MMGT1 COSMIC
Ensembl Genes ENSG00000169446 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000305963 ENTREZGENE
  ENST00000305963.3 UniProtKB/Swiss-Prot
  ENST00000679621 ENTREZGENE
  ENST00000679621.1 UniProtKB/Swiss-Prot
GTEx ENSG00000169446 GTEx
HGNC ID HGNC:28100 ENTREZGENE
Human Proteome Map MMGT1 Human Proteome Map
InterPro Magnesium_transport UniProtKB/Swiss-Prot
KEGG Report hsa:93380 UniProtKB/Swiss-Prot
NCBI Gene 93380 ENTREZGENE
OMIM 301098 OMIM
PANTHER ER MEMBRANE PROTEIN COMPLEX SUBUNIT 5 UniProtKB/Swiss-Prot
  PTHR21181 UniProtKB/Swiss-Prot
Pfam MMgT UniProtKB/Swiss-Prot
PharmGKB PA164723074 PharmGKB
UniProt A0A7P0T9E6_HUMAN UniProtKB/TrEMBL
  A0A7P0TBL5_HUMAN UniProtKB/TrEMBL
  B2R625 ENTREZGENE
  B4DIY3 ENTREZGENE
  D3DWG7 ENTREZGENE
  MMGT1_HUMAN UniProtKB/Swiss-Prot
  Q5JPP7 ENTREZGENE
  Q8N4V1 ENTREZGENE
UniProt Secondary B2R625 UniProtKB/Swiss-Prot
  B4DIY3 UniProtKB/Swiss-Prot
  D3DWG7 UniProtKB/Swiss-Prot
  Q5JPP7 UniProtKB/Swiss-Prot
1 to 29 of 29 rows