GAREM1 (GRB2 associated regulator of MAPK1 subtype 1) - Rat Genome Database

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Gene: GAREM1 (GRB2 associated regulator of MAPK1 subtype 1) Homo sapiens
Analyze
Symbol: GAREM1
Name: GRB2 associated regulator of MAPK1 subtype 1
RGD ID: 1342843
HGNC Page HGNC:26136
Description: Enables proline-rich region binding activity. Involved in several processes, including cellular response to epidermal growth factor stimulus; epidermal growth factor receptor signaling pathway; and positive regulation of ERK1 and ERK2 cascade. Predicted to be located in plasma membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: C18orf11; chromosome 18 open reading frame 11; FAM59A; family with sequence similarity 59, member A; GAREM; Gm944; GRB2 associated regulator of MAPK1 1; GRB2 associated, regulator of MAPK1; Grb2-associated and regulator of Erk/MAPK; GRB2-associated and regulator of MAPK protein; GRB2-associated and regulator of MAPK protein 1; GRB2-associated and regulator of MAPK1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381832,263,522 - 32,470,882 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1832,124,877 - 32,470,882 (-)EnsemblGRCh38hg38GRCh38
GRCh371829,843,485 - 30,050,845 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361828,101,461 - 28,304,445 (-)NCBINCBI36Build 36hg18NCBI36
Build 341828,101,474 - 28,304,445NCBI
Celera1826,654,417 - 26,857,408 (-)NCBICelera
Cytogenetic Map18q12.1NCBI
HuRef1826,700,077 - 26,907,135 (-)NCBIHuRef
CHM1_11829,770,990 - 29,977,911 (-)NCBICHM1_1
T2T-CHM13v2.01832,453,815 - 32,661,186 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GAREM1Humanchromosome 18q deletion syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Monosomy 18q and deletion 18qClinVarPMID:31690835
GAREM1Humanintellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 

1 to 20 of 57 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GAREM1Human(1->4)-beta-D-glucan multiple interactionsISOGarem1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of GAREM1 mRNACTDPMID:36331819
GAREM1Human1,2-dimethylhydrazine decreases expressionISOGarem1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of GAREM1 mRNACTDPMID:22206623
GAREM1Human17beta-estradiol multiple interactionsEXP 6480464[Estradiol co-treated with TGFB1 protein] results in increased expression of GAREM1 mRNACTDPMID:30165855
GAREM1Human17beta-estradiol decreases expressionISOGarem1 (Mus musculus)6480464Estradiol results in decreased expression of GAREM1 mRNACTDPMID:39298647
GAREM1Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOGarem1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of GAREM1 mRNACTDPMID:19933214
GAREM1Human4,4'-sulfonyldiphenol decreases expressionISOGarem1 (Mus musculus)6480464bisphenol S results in decreased expression of GAREM1 mRNACTDPMID:39298647
GAREM1Human4-hydroxyphenyl retinamide increases expressionISOGarem1 (Mus musculus)6480464Fenretinide results in increased expression of GAREM1 mRNACTDPMID:28973697
GAREM1Humanaflatoxin B1 affects expressionEXP 6480464Aflatoxin B1 affects the expression of GAREM1 proteinCTDPMID:20106945
GAREM1Humanaflatoxin B1 decreases methylationEXP 6480464Aflatoxin B1 results in decreased methylation of GAREM1 geneCTDPMID:27153756
GAREM1Humanaflatoxin B1 decreases expressionEXP 6480464Aflatoxin B1 results in decreased expression of GAREM1 mRNACTDPMID:22100608
GAREM1Humanall-trans-retinoic acid decreases expressionEXP 6480464Tretinoin results in decreased expression of GAREM1 mRNACTDPMID:21934132
GAREM1Humanamphetamine decreases expressionISOGarem1 (Rattus norvegicus)6480464Amphetamine results in decreased expression of GAREM1 mRNACTDPMID:30779732
GAREM1Humanaristolochic acid A decreases expressionEXP 6480464aristolochic acid I results in decreased expression of GAREM1 mRNACTDPMID:33212167
GAREM1Humanarsenite(3-) decreases methylationEXP 6480464arsenite results in decreased methylation of GAREM1 promoterCTDPMID:23974009
GAREM1Humanbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of GAREM1 mRNACTDPMID:29275510
GAREM1Humanbisphenol A decreases expressionISOGarem1 (Mus musculus)6480464bisphenol A results in decreased expression of GAREM1 mRNACTDPMID:38074096
GAREM1Humanbisphenol A increases expressionISOGarem1 (Mus musculus)6480464bisphenol A results in increased expression of GAREM1 mRNACTDPMID:35598803
GAREM1Humanbisphenol A increases expressionISOGarem1 (Rattus norvegicus)6480464bisphenol A results in increased expression of GAREM1 mRNACTDPMID:30816183
GAREM1Humanbisphenol F increases expressionISOGarem1 (Mus musculus)6480464bisphenol F results in increased expression of GAREM1 mRNACTDPMID:38685157
GAREM1Humancadmium dichloride increases expressionEXP 6480464Cadmium Chloride results in increased expression of GAREM1 mRNACTDPMID:26472689

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Biological Process
1 to 9 of 9 rows

  
1 to 9 of 9 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GAREM1Humanplasma membrane located_inNAS 150520179 PMID:19509291UniProtPMID:19509291

Molecular Function

  

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GAREM1HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 

#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
PMID:14702039   PMID:15489334   PMID:15592455   PMID:15951569   PMID:18854154   PMID:19240061   PMID:19509291   PMID:20379614   PMID:20936779   PMID:21706016   PMID:21873635   PMID:21988832  
PMID:24003223   PMID:25035420   PMID:25416956   PMID:25814554   PMID:25921289   PMID:26164232   PMID:26186194   PMID:26673895   PMID:28514442   PMID:29273731   PMID:30177387   PMID:31980649  
PMID:32296183   PMID:32393512   PMID:33961781   PMID:34273398   PMID:35044719   PMID:35156780   PMID:35748872   PMID:36084556   PMID:37071682  



GAREM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381832,263,522 - 32,470,882 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1832,124,877 - 32,470,882 (-)EnsemblGRCh38hg38GRCh38
GRCh371829,843,485 - 30,050,845 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361828,101,461 - 28,304,445 (-)NCBINCBI36Build 36hg18NCBI36
Build 341828,101,474 - 28,304,445NCBI
Celera1826,654,417 - 26,857,408 (-)NCBICelera
Cytogenetic Map18q12.1NCBI
HuRef1826,700,077 - 26,907,135 (-)NCBIHuRef
CHM1_11829,770,990 - 29,977,911 (-)NCBICHM1_1
T2T-CHM13v2.01832,453,815 - 32,661,186 (-)NCBIT2T-CHM13v2.0
Garem1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391821,257,916 - 21,433,196 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1821,260,258 - 21,433,195 (-)EnsemblGRCm39 Ensembl
GRCm381821,127,342 - 21,300,139 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1821,127,201 - 21,300,138 (-)EnsemblGRCm38mm10GRCm38
MGSCv371821,285,843 - 21,458,640 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361821,270,211 - 21,443,148 (-)NCBIMGSCv36mm8
Celera1821,623,035 - 21,796,413 (-)NCBICelera
Cytogenetic Map18A2NCBI
cM Map1811.87NCBI
Garem1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81812,695,082 - 12,860,219 (-)NCBIGRCr8
mRatBN7.21812,420,169 - 12,585,323 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1812,423,882 - 12,585,345 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01814,982,604 - 15,007,245 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1812,224,514 - 12,284,188 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1812,224,514 - 12,284,188 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01814,769,102 - 14,791,523 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41812,944,256 - 12,946,270 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1812,415,517 - 12,519,188 (-)NCBICelera
Cytogenetic Map18p12NCBI
Garem1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540219,469,649 - 19,663,654 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540219,469,652 - 19,663,654 (-)NCBIChiLan1.0ChiLan1.0
GAREM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21749,639,460 - 49,847,521 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11835,332,057 - 35,540,119 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01825,470,702 - 25,678,146 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11829,065,053 - 29,272,225 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1829,065,053 - 29,272,231 (-)Ensemblpanpan1.1panPan2
GAREM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1757,158,005 - 57,423,643 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl757,295,070 - 57,419,252 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha756,654,442 - 56,856,713 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0757,196,399 - 57,404,576 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl757,195,979 - 57,400,589 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1756,881,075 - 57,082,118 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0756,898,894 - 57,100,606 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0757,195,790 - 57,397,330 (+)NCBIUU_Cfam_GSD_1.0
Garem1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494452,926,545 - 53,066,880 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936682947,487 - 1,068,482 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936682947,420 - 1,068,468 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GAREM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6116,100,372 - 116,325,133 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16116,100,371 - 116,324,853 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26108,838,673 - 109,028,414 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GAREM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11848,287,589 - 48,483,135 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1848,287,579 - 48,483,552 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605022,837,054 - 23,033,716 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Garem1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624770500,641 - 728,014 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624770501,113 - 727,736 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in GAREM1
15 total Variants

1 to 10 of 57 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 18q12.1-12.3(chr18:31655749-42564094)x3 copy number gain See cases [RCV000050773] Chr18:31655749..42564094 [GRCh38]
Chr18:29235712..40144059 [GRCh37]
Chr18:27489710..38398057 [NCBI36]
Chr18:18q12.1-12.3
pathogenic
GRCh38/hg38 18q12.1-12.3(chr18:29444510-40403652)x1 copy number loss See cases [RCV000051090] Chr18:29444510..40403652 [GRCh38]
Chr18:27024475..37983616 [GRCh37]
Chr18:25278473..36237614 [NCBI36]
Chr18:18q12.1-12.3
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:148963-80252149)x3 copy number gain See cases [RCV000051048] Chr18:148963..80252149 [GRCh38]
Chr18:148963..78010032 [GRCh37]
Chr18:138963..76111023 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18q11.1-23(chr18:20960320-80234429)x3 copy number gain See cases [RCV000052543] Chr18:20960320..80234429 [GRCh38]
Chr18:18540281..77992312 [GRCh37]
Chr18:16794279..76093303 [NCBI36]
Chr18:18q11.1-23
pathogenic
GRCh38/hg38 18q12.1-22.1(chr18:29249202-65448117)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052563]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052563]|See cases [RCV000052563] Chr18:29249202..65448117 [GRCh38]
Chr18:26829167..63115353 [GRCh37]
Chr18:25083165..61266333 [NCBI36]
Chr18:18q12.1-22.1
pathogenic
GRCh38/hg38 18q12.1-12.3(chr18:32111530-44070219)x1 copy number loss See cases [RCV000053829] Chr18:32111530..44070219 [GRCh38]
Chr18:29691493..41650184 [GRCh37]
Chr18:27945491..39904182 [NCBI36]
Chr18:18q12.1-12.3
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:53345-80209986)x3 copy number gain See cases [RCV000052501] Chr18:53345..80209986 [GRCh38]
Chr18:53345..77967869 [GRCh37]
Chr18:43345..76068860 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18q11.1-23(chr18:20989762-80209986)x3 copy number gain See cases [RCV000052549] Chr18:20989762..80209986 [GRCh38]
Chr18:18569723..77967869 [GRCh37]
Chr18:16823721..76068860 [NCBI36]
Chr18:18q11.1-23
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:148763-80252290)x3 copy number gain See cases [RCV000052507] Chr18:148763..80252290 [GRCh38]
Chr18:148763..78010173 [GRCh37]
Chr18:138763..76111164 [NCBI36]
Chr18:18p11.32-q23
pathogenic
GRCh38/hg38 18p11.32-q23(chr18:148963-80244381)x3 copy number gain See cases [RCV000052514] Chr18:148963..80244381 [GRCh38]
Chr18:148963..78002264 [GRCh37]
Chr18:138963..76103255 [NCBI36]
Chr18:18p11.32-q23
pathogenic
1 to 10 of 57 rows

Predicted Target Of
Summary Value
Count of predictions:2110
Count of miRNA genes:981
Interacting mature miRNAs:1202
Transcripts:ENST00000269209, ENST00000399218, ENST00000578619, ENST00000583696
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 14 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597606111GWAS1662971_Hmetabolic disease QTL GWAS1662971 (human)4e-12metabolic disease183243432632434327Human
597024470GWAS1120544_Hestrogen-receptor negative breast cancer QTL GWAS1120544 (human)0.000005estrogen-receptor negative breast cancer183239772632397727Human
597049621GWAS1145695_Hbreast carcinoma QTL GWAS1145695 (human)1e-11mammary gland integrity trait (VT:0010552)183239772632397727Human
407049792GWAS698768_HPR interval QTL GWAS698768 (human)6e-08PR intervalPR interval (CMO:0000233)183245256232452563Human
597084528GWAS1180602_HPR interval QTL GWAS1180602 (human)4e-14PR intervalPR interval (CMO:0000233)183244011232440113Human
597325459GWAS1421533_Hforced expiratory volume QTL GWAS1421533 (human)4e-10forced expiratory volumeforced expiratory volume (CMO:0000254)183238737032387371Human
597340820GWAS1436894_Hlung adenocarcinoma QTL GWAS1436894 (human)4e-08lung adenocarcinoma183234295832342959Human
407048147GWAS697123_Huric acid measurement QTL GWAS697123 (human)0.000005uric acid measurementblood uric acid level (CMO:0000501)183231910432319105Human
597086855GWAS1182929_HPR interval QTL GWAS1182929 (human)0.000002PR intervalPR interval (CMO:0000233)183244917832449179Human
597079173GWAS1175247_HPR interval QTL GWAS1175247 (human)2e-18PR intervalPR interval (CMO:0000233)183244917832449179Human

1 to 10 of 14 rows
D18S457  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371829,866,352 - 29,866,450UniSTSGRCh37
GRCh371829,866,262 - 29,866,379UniSTSGRCh37
Build 361828,120,260 - 28,120,377RGDNCBI36
Celera1826,673,215 - 26,673,332RGD
Celera1826,673,305 - 26,673,403UniSTS
Cytogenetic Map18q12.1UniSTS
HuRef1826,722,948 - 26,723,046UniSTS
HuRef1826,722,858 - 26,722,975UniSTS
Marshfield Genetic Map1858.45RGD
Genethon Genetic Map1858.9UniSTS
TNG Radiation Hybrid Map1810779.0UniSTS
deCODE Assembly Map1854.81UniSTS
GeneMap99-GB4 RH Map18251.04UniSTS
Whitehead-YAC Contig Map18 UniSTS
GeneMap99-G3 RH Map181066.0UniSTS
WI-14403  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371829,847,661 - 29,847,790UniSTSGRCh37
Build 361828,101,659 - 28,101,788RGDNCBI36
Celera1826,654,615 - 26,654,744RGD
Cytogenetic Map18q12.1UniSTS
HuRef1826,704,254 - 26,704,383UniSTS
GeneMap99-GB4 RH Map18247.79UniSTS
Whitehead-RH Map18247.7UniSTS
D18S921E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371829,847,774 - 29,847,955UniSTSGRCh37
Build 361828,101,772 - 28,101,953RGDNCBI36
Celera1826,654,728 - 26,654,909RGD
Cytogenetic Map18q12.1UniSTS
HuRef1826,704,367 - 26,704,548UniSTS
D18S937E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371829,844,873 - 29,844,980UniSTSGRCh37
Build 361828,098,871 - 28,098,978RGDNCBI36
Celera1826,651,827 - 26,651,934RGD
Cytogenetic Map18q12.1UniSTS
HuRef1826,701,466 - 26,701,573UniSTS
SHGC-148085  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371830,031,299 - 30,031,576UniSTSGRCh37
Build 361828,285,297 - 28,285,574RGDNCBI36
Celera1826,838,252 - 26,838,529RGD
Cytogenetic Map18q12.1UniSTS
HuRef1826,887,953 - 26,888,230UniSTS
TNG Radiation Hybrid Map1810831.0UniSTS
SHGC-153799  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371830,032,839 - 30,032,949UniSTSGRCh37
Build 361828,286,837 - 28,286,947RGDNCBI36
Celera1826,839,792 - 26,839,902RGD
Cytogenetic Map18q12.1UniSTS
HuRef1826,889,493 - 26,889,603UniSTS
TNG Radiation Hybrid Map1810831.0UniSTS
G65665  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371830,001,670 - 30,001,933UniSTSGRCh37
Build 361828,255,668 - 28,255,931RGDNCBI36
Celera1826,808,623 - 26,808,886RGD
Cytogenetic Map18q12.1UniSTS
HuRef1826,858,324 - 26,858,587UniSTS
SHGC-36802  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371829,843,512 - 29,843,636UniSTSGRCh37
Build 361828,097,510 - 28,097,634RGDNCBI36
Celera1826,650,466 - 26,650,590RGD
Cytogenetic Map18q12.1UniSTS
HuRef1826,700,105 - 26,700,229UniSTS
Stanford-G3 RH Map181066.0UniSTS
GeneMap99-G3 RH Map181066.0UniSTS
SHGC-30861  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371830,001,668 - 30,001,803UniSTSGRCh37
Build 361828,255,666 - 28,255,801RGDNCBI36
Celera1826,808,621 - 26,808,756RGD
Cytogenetic Map18q12.1UniSTS
HuRef1826,858,322 - 26,858,457UniSTS
Stanford-G3 RH Map181084.0UniSTS
Whitehead-RH Map18268.7UniSTS
NCBI RH Map18369.8UniSTS
GeneMap99-G3 RH Map181084.0UniSTS
SHGC-52747  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371829,846,301 - 29,846,456UniSTSGRCh37
Build 361828,100,299 - 28,100,454RGDNCBI36
Celera1826,653,255 - 26,653,410RGD
Cytogenetic Map18q12.1UniSTS
HuRef1826,702,894 - 26,703,049UniSTS
TNG Radiation Hybrid Map1810770.0UniSTS
WI-22103  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map18q12.1UniSTS
HuRef1826,727,676 - 26,727,751UniSTS
Whitehead-RH Map18268.1UniSTS
D18S457  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map18q12.1UniSTS
Marshfield Genetic Map1858.45UniSTS
Genethon Genetic Map1858.9UniSTS
TNG Radiation Hybrid Map1810776.0UniSTS
deCODE Assembly Map1854.81UniSTS
Whitehead-YAC Contig Map18 UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2249 4971 1722 2346 6 624 1703 465 2269 7062 6228 50 3732 1 852 1744 1611 175 1


1 to 27 of 27 rows
RefSeq Transcripts NG_030329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001242409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_022751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017025919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024451234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024451235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024451236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054318978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054318979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054318980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054318981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC009835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC015563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC021224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF086529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI479499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL834491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC121067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC121068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 27 of 27 rows

Ensembl Acc Id: ENST00000269209   ⟹   ENSP00000269209
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1832,263,522 - 32,470,882 (-)Ensembl
Ensembl Acc Id: ENST00000399218   ⟹   ENSP00000382165
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1832,263,522 - 32,470,484 (-)Ensembl
Ensembl Acc Id: ENST00000578619
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1832,287,876 - 32,331,670 (-)Ensembl
Ensembl Acc Id: ENST00000583696   ⟹   ENSP00000464185
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1832,124,877 - 32,287,095 (-)Ensembl
RefSeq Acc Id: NM_001242409   ⟹   NP_001229338
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381832,263,522 - 32,470,882 (-)NCBI
GRCh371829,843,484 - 30,050,447 (-)ENTREZGENE
HuRef1826,700,077 - 26,907,135 (-)ENTREZGENE
CHM1_11829,770,990 - 29,977,911 (-)NCBI
T2T-CHM13v2.01832,453,815 - 32,661,186 (-)NCBI
Sequence:
RefSeq Acc Id: NM_022751   ⟹   NP_073588
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381832,263,522 - 32,470,882 (-)NCBI
GRCh371829,843,484 - 30,050,447 (-)NCBI
Build 361828,101,461 - 28,304,445 (-)NCBI Archive
Celera1826,654,417 - 26,857,408 (-)RGD
HuRef1826,700,077 - 26,907,135 (-)ENTREZGENE
CHM1_11829,770,990 - 29,977,911 (-)NCBI
T2T-CHM13v2.01832,453,815 - 32,661,186 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017025919   ⟹   XP_016881408
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381832,268,786 - 32,470,882 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024451234   ⟹   XP_024307002
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381832,263,522 - 32,420,891 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047437739   ⟹   XP_047293695
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381832,263,522 - 32,393,000 (-)NCBI
RefSeq Acc Id: XM_047437740   ⟹   XP_047293696
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381832,263,522 - 32,363,903 (-)NCBI
RefSeq Acc Id: XM_054318978   ⟹   XP_054174953
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01832,453,815 - 32,611,197 (-)NCBI
RefSeq Acc Id: XM_054318979   ⟹   XP_054174954
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01832,453,815 - 32,583,306 (-)NCBI
RefSeq Acc Id: XM_054318980   ⟹   XP_054174955
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01832,453,815 - 32,554,202 (-)NCBI
RefSeq Acc Id: XM_054318981   ⟹   XP_054174956
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01832,459,079 - 32,661,186 (-)NCBI
1 to 5 of 13 rows
1 to 5 of 13 rows
RefSeq Acc Id: NP_073588   ⟸   NM_022751
- Peptide Label: isoform 2
- UniProtKB: B4DME6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001229338   ⟸   NM_001242409
- Peptide Label: isoform 1
- UniProtKB: Q8ND03 (UniProtKB/Swiss-Prot),   Q0VAG4 (UniProtKB/Swiss-Prot),   Q0VAG3 (UniProtKB/Swiss-Prot),   Q9BSF5 (UniProtKB/Swiss-Prot),   Q9H706 (UniProtKB/Swiss-Prot),   B4DME6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016881408   ⟸   XM_017025919
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_024307002   ⟸   XM_024451234
- Peptide Label: isoform X1
- UniProtKB: B4DME6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000382165   ⟸   ENST00000399218
CABIT   SAM

Name Modeler Protein Id AA Range Protein Structure
AF-Q9H706-F1-model_v2 AlphaFold Q9H706 1-876 view protein structure

RGD ID:6794872
Promoter ID:HG_KWN:27852
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000255364,   UC002KXL.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361828,304,306 - 28,305,017 (-)MPROMDB
RGD ID:7237155
Promoter ID:EPDNEW_H24323
Type:initiation region
Name:GAREM1_1
Description:GRB2 associated regulator of MAPK1 subtype 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381832,470,519 - 32,470,579EPDNEW


1 to 33 of 33 rows
Database
Acc Id
Source(s)
COSMIC GAREM1 COSMIC
Ensembl Genes ENSG00000141441 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000269209 ENTREZGENE
  ENST00000269209.7 UniProtKB/Swiss-Prot
  ENST00000399218 ENTREZGENE
  ENST00000399218.8 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.150.50 UniProtKB/Swiss-Prot
GTEx ENSG00000141441 GTEx
HGNC ID HGNC:26136 ENTREZGENE
Human Proteome Map GAREM1 Human Proteome Map
InterPro CABIT_dom UniProtKB/Swiss-Prot
  GAREM UniProtKB/Swiss-Prot
  SAM/pointed_sf UniProtKB/Swiss-Prot
KEGG Report hsa:64762 UniProtKB/Swiss-Prot
NCBI Gene 64762 ENTREZGENE
OMIM 617998 OMIM
PANTHER GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN 1 UniProtKB/Swiss-Prot
  GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER UniProtKB/Swiss-Prot
Pfam CABIT UniProtKB/Swiss-Prot
PharmGKB PA134888032 PharmGKB
Superfamily-SCOP SSF47769 UniProtKB/Swiss-Prot
UniProt B4DME6 ENTREZGENE, UniProtKB/TrEMBL
  GARE1_HUMAN UniProtKB/Swiss-Prot
  J3QRF3_HUMAN UniProtKB/TrEMBL
  Q0VAG3 ENTREZGENE
  Q0VAG4 ENTREZGENE
  Q8ND03 ENTREZGENE
  Q9BSF5 ENTREZGENE
  Q9H706 ENTREZGENE
UniProt Secondary Q0VAG3 UniProtKB/Swiss-Prot
  Q0VAG4 UniProtKB/Swiss-Prot
  Q8ND03 UniProtKB/Swiss-Prot
  Q9BSF5 UniProtKB/Swiss-Prot
1 to 33 of 33 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 GAREM1  GRB2 associated regulator of MAPK1 subtype 1  GAREM1  GRB2 associated regulator of MAPK1 1  Symbol and/or name change 5135510 APPROVED
2015-11-10 GAREM1  GRB2 associated regulator of MAPK1 1  GAREM  GRB2 associated, regulator of MAPK1  Symbol and/or name change 5135510 APPROVED
2012-12-04 GAREM  GRB2 associated, regulator of MAPK1  FAM59A  family with sequence similarity 59, member A  Symbol and/or name change 5135510 APPROVED