Or10p23-ps1 (olfactory receptor family 10 subfamily P member 23, pseudogene 1) - Rat Genome Database

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Gene: Or10p23-ps1 (olfactory receptor family 10 subfamily P member 23, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Or10p23-ps1
Name: olfactory receptor family 10 subfamily P member 23, pseudogene 1
RGD ID: 1333277
Description: olfactory receptor pseudogene
Type: pseudo
RefSeq Status: REVIEWED
Previously known as: olfactory receptor pseudogene 888; Olr888-ps; ratchr7-3090112-3091006_ORF
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr872,954,733 - 2,955,627 (-)NCBIGRCr8
mRatBN7.272,326,247 - 2,327,141 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx75,154,240 - 5,155,134 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.077,029,904 - 7,030,798 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.077,313,642 - 7,314,536 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.074,116,112 - 4,117,006 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.074,106,083 - 4,106,977 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.473,090,091 - 3,091,006 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.173,090,011 - 3,091,106 (+)NCBI
Celera711,263,792 - 11,264,686 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7166965846669658Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)7123748937Rat
2290372Gluco33Glucose level QTL 332.71blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)7131777942Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)71104117804Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7170952746709527Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7132612984Rat
1582260Bw72Body weight QTL 723.20.0043body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
1582261Bw69Body weight QTL 693.20.0048body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
1582262Bw75Body weight QTL 7530.0038body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
2298550Neuinf6Neuroinflammation QTL 63.3nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)7129716167Rat
724560Plsm3Polydactyly-luxate syndrome (PLS) morphotypes QTL 30.0003tibia length (VT:0004357)tibia length (CMO:0000450)7134650782Rat
7411566Bw136Body weight QTL 13610.40.001body mass (VT:0001259)body weight gain (CMO:0000420)7132612984Rat


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_003479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-35285 BioCyc
NCBI Gene 366795 ENTREZGENE
PhenoGen Or10p23-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-16 Or10p23-ps1  olfactory receptor family 10 subfamily P member 23, pseudogene 1  Olr888-ps  olfactory receptor pseudogene 888  Symbol and Name Changed 1299863 APPROVED
2005-02-04 Olr888-ps  olfactory receptor pseudogene 888      Symbol and Name status set to approved 70820 APPROVED