Wdr31 (WD repeat domain 31) - Rat Genome Database

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Gene: Wdr31 (WD repeat domain 31) Mus musculus
Analyze
Symbol: Wdr31
Name: WD repeat domain 31
RGD ID: 1319679
MGI Page MGI
Description: Is expressed in several structures, including alimentary system; brain ventricle and choroid plexus; genitourinary system; lung; and olfactory epithelium. Orthologous to human WDR31 (WD repeat domain 31).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 5430402I10Rik; spermatid WD repeat-containing protein; spermatid WD-repeat protein; spWD; WD repeat-containing protein 31
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39462,366,890 - 62,389,236 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl462,366,890 - 62,389,133 (-)EnsemblGRCm39 Ensembl
GRCm38462,448,653 - 62,470,999 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl462,448,653 - 62,470,896 (-)EnsemblGRCm38mm10GRCm38
MGSCv37462,114,768 - 62,131,906 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36461,940,095 - 61,957,233 (-)NCBIMGSCv36mm8
Celera461,123,938 - 61,141,015 (-)NCBICelera
Cytogenetic Map4B3NCBI
cM Map433.14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9237247   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21677750  


Genomics

Comparative Map Data
Wdr31
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39462,366,890 - 62,389,236 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl462,366,890 - 62,389,133 (-)EnsemblGRCm39 Ensembl
GRCm38462,448,653 - 62,470,999 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl462,448,653 - 62,470,896 (-)EnsemblGRCm38mm10GRCm38
MGSCv37462,114,768 - 62,131,906 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36461,940,095 - 61,957,233 (-)NCBIMGSCv36mm8
Celera461,123,938 - 61,141,015 (-)NCBICelera
Cytogenetic Map4B3NCBI
cM Map433.14NCBI
WDR31
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389113,313,222 - 113,340,275 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9113,313,222 - 113,340,298 (-)EnsemblGRCh38hg38GRCh38
GRCh379116,075,502 - 116,102,555 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369115,117,751 - 115,142,388 (-)NCBINCBI36Build 36hg18NCBI36
Build 349113,157,484 - 113,182,121NCBI
Celera986,725,549 - 86,750,228 (-)NCBICelera
Cytogenetic Map9q32NCBI
HuRef985,685,302 - 85,710,020 (-)NCBIHuRef
CHM1_19116,224,589 - 116,249,279 (-)NCBICHM1_1
T2T-CHM13v2.09125,512,036 - 125,539,119 (-)NCBIT2T-CHM13v2.0
Wdr31
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8580,914,338 - 80,933,022 (-)NCBIGRCr8
mRatBN7.2575,897,074 - 75,917,461 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl575,898,353 - 75,917,417 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx578,298,350 - 78,316,693 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0580,115,447 - 80,133,790 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0580,090,957 - 80,109,300 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0578,305,526 - 78,324,318 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl578,305,526 - 78,324,278 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0582,425,258 - 82,444,051 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4579,442,642 - 79,461,272 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1579,447,754 - 79,466,385 (-)NCBI
Celera574,840,523 - 74,859,032 (-)NCBICelera
Cytogenetic Map5q24NCBI
Wdr31
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541914,150,293 - 14,168,256 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541914,150,881 - 14,168,256 (+)NCBIChiLan1.0ChiLan1.0
WDR31
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21126,032,727 - 26,064,646 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1926,035,105 - 26,066,996 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0984,413,199 - 84,442,635 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19112,787,170 - 112,813,503 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9112,787,170 - 112,813,503 (-)Ensemblpanpan1.1panPan2
WDR31
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11167,680,778 - 67,699,416 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1167,680,778 - 67,695,679 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1166,084,926 - 66,104,206 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01168,805,006 - 68,824,156 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1168,804,584 - 68,824,143 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11167,322,588 - 67,341,848 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01167,344,492 - 67,363,418 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01168,090,574 - 68,109,871 (-)NCBIUU_Cfam_GSD_1.0
Wdr31
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947182,978,352 - 182,997,614 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936559270,272 - 288,214 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936559269,005 - 288,159 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WDR31
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1253,945,953 - 253,966,692 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11253,942,570 - 253,966,769 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21284,697,707 - 284,718,169 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WDR31
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11226,233,434 - 26,257,807 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1226,242,384 - 26,261,048 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603516,543,556 - 16,567,416 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wdr31
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476021,764,839 - 21,780,561 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476021,760,148 - 21,781,027 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Wdr31
500 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1452
Count of miRNA genes:645
Interacting mature miRNAs:808
Transcripts:ENSMUST00000030087, ENSMUST00000107452, ENSMUST00000120095, ENSMUST00000132263, ENSMUST00000135811, ENSMUST00000146108, ENSMUST00000149281, ENSMUST00000153615, ENSMUST00000155522
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141900Skts-fp1_mskin tumor susceptibility in FVB and PWK 1 (mouse)Not determined453550839124055180Mouse
13524838Hbasrq1a_mhabituation of the acoustic startle response QTL 1a (mouse)45447158988471589Mouse
1301786Bpq3_mblood pressure QTL 3 (mouse)Not determined44240224076402381Mouse
11532714Sluc43_msusceptibility to lung cancer 43 (mouse)446642108123127211Mouse
1301213Lgth3_mbody length 3 (mouse)Not determined45010026284100408Mouse
13524841Hbasrq1_mhabituation of the acoustic startle response QTL 1 (mouse)45447158988471589Mouse
27095905Scvln3_msacral vertebrae length 2, 5 week (mouse)455600000128993793Mouse
4142318Lyr2_mlymphoma resistance 2 (mouse)Not determined1401045763283678Mouse
1301990Arvm1_mautoimmune renal vasculitis 1 (mouse)Not determined42933264663332776Mouse
1302116Bbaa1_mB.burgdorferi-associated arthritis 1 (mouse)Not determined43825093072251078Mouse
12879977Bod2_mbone length and organs 2 (mouse)44628353180283678Mouse
1300966Pabr2_mplasma apolipoprotein B (human) regulator 2 (mouse)Not determined446332646105801860Mouse
1301995Lprm1_mlymphoproliferation modifier 1 (mouse)Not determined45010026284100408Mouse
1301033Abbp2_mA/J and C57BL/6 blood pressure 2 (mouse)Not determined45355083993763305Mouse
25394561Skmw53_mskeletal muscle weight 53, TA (mouse)46213829369838031Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
1301792Hdlq10_mHDL QTL 10 (mouse)Not determined43585970769859853Mouse
1301941Mmtg1_mmodifier of mammary tumor growth 1 (mouse)Not determined44565844283099157Mouse
10043964Obq26_mobesity QTL 26 (mouse)Not determined45904725193047251Mouse
10043880Adip23_madiposity 23 (mouse)Not determined44628353180283678Mouse
10449022Aanq1_maristolochic acid nephrotoxicity QTL 1 (mouse)44660382680603826Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
10412178Habiir2_mhyperoxic acute lung injury imprinted region 2 (mouse)Not determined43945212663283678Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
13207572Spir2_mStreptococcus pneumoniae infection resistance 2 (mouse)45068279588510637Mouse
1301586Stheal3_msoft tissue heal 3 (mouse)Not determined42865844262658566Mouse
1558948Ath8_matherosclerosis 8 (mouse)Not determined445658442105156995Mouse
1301190Cd4ts2_mCD4 T cell subset 2 (mouse)Not determined46014527794145424Mouse
1357443Lhyp_mlung hyperpermeability (mouse)Not determined46045401166764818Mouse
11532688Mh_mmodifier of hemostasis (mouse)44830477582304775Mouse
27095934Ulnl2_mulna length 2, 5 week (mouse)45770000094788237Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
1357877Synch1_msynechia 1 (mouse)Not determined42870992562710107Mouse
27226724Tibw2_mtibia width 2, proximal, 10 week (mouse)443000000108357197Mouse
25314308Mlh1fc1_mMLH1 foci count 1 (mouse)44850000076918237Mouse
1300977Mopkd1_mmodifier of polycystic kidney disease progression 1 (mouse)Not determined43655083970550967Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
26884434Zlq1_mzygomatic length QTL 1, 5 week (mouse)453700000103257197Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
1357507Synch2_msynechia 2 (mouse)Not determined46014527794145424Mouse

Markers in Region
RH125907  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4C1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map7B5UniSTS
Cytogenetic Map2G3UniSTS
cM Map727.0UniSTS
Whitehead/MRC_RH10717.49UniSTS
UniSTS:224390  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38462,471,127 - 62,471,282UniSTSGRCm38
MGSCv37462,132,161 - 62,132,316UniSTSGRCm37
Celera461,141,270 - 61,141,425UniSTS
Cytogenetic Map4C1UniSTS
px-50g7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3F1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map7B5UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map3B-DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map4C1UniSTS
Cytogenetic Map18CUniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map2F2UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic Map9A1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map4D2.2UniSTS
cM Map74.0UniSTS
cM Map1718.88UniSTS
cM Map241.25UniSTS
cM Map727.0UniSTS
cM Map342.1UniSTS
cM Map275.0UniSTS
cM Map153.6UniSTS
cM Map91.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001290521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_023597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_390342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF274321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL732594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV039764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK618879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000030087   ⟹   ENSMUSP00000030087
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl462,371,871 - 62,389,124 (-)Ensembl
GRCm38.p6 Ensembl462,453,634 - 62,470,887 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107452   ⟹   ENSMUSP00000103076
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl462,371,871 - 62,389,124 (-)Ensembl
GRCm38.p6 Ensembl462,453,634 - 62,470,887 (-)Ensembl
RefSeq Acc Id: ENSMUST00000120095   ⟹   ENSMUSP00000112719
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl462,370,869 - 62,389,124 (-)Ensembl
GRCm38.p6 Ensembl462,452,632 - 62,470,887 (-)Ensembl
RefSeq Acc Id: ENSMUST00000132263   ⟹   ENSMUSP00000120684
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl462,371,871 - 62,378,645 (-)Ensembl
GRCm38.p6 Ensembl462,453,634 - 62,460,408 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135811   ⟹   ENSMUSP00000116182
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl462,382,236 - 62,389,111 (-)Ensembl
GRCm38.p6 Ensembl462,463,999 - 62,470,874 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146108
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl462,366,890 - 62,387,125 (-)Ensembl
GRCm38.p6 Ensembl462,448,653 - 62,468,888 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149281
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl462,376,623 - 62,379,086 (-)Ensembl
GRCm38.p6 Ensembl462,458,386 - 62,460,849 (-)Ensembl
RefSeq Acc Id: ENSMUST00000153615
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl462,375,778 - 62,377,510 (-)Ensembl
GRCm38.p6 Ensembl462,457,541 - 62,459,273 (-)Ensembl
RefSeq Acc Id: ENSMUST00000155522   ⟹   ENSMUSP00000123624
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl462,381,581 - 62,389,133 (-)Ensembl
GRCm38.p6 Ensembl462,463,344 - 62,470,896 (-)Ensembl
RefSeq Acc Id: NM_001290521   ⟹   NP_001277450
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,370,869 - 62,389,136 (-)NCBI
GRCm38462,452,632 - 62,470,899 (-)NCBI
Celera461,122,835 - 61,141,038 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001290522   ⟹   NP_001277451
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,370,869 - 62,389,136 (-)NCBI
GRCm38462,452,632 - 62,470,899 (-)NCBI
Celera461,122,835 - 61,141,038 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001355523   ⟹   NP_001342452
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,370,869 - 62,389,136 (-)NCBI
GRCm38462,452,632 - 62,470,899 (-)NCBI
Sequence:
RefSeq Acc Id: NM_023597   ⟹   NP_076086
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,370,869 - 62,389,136 (-)NCBI
GRCm38462,452,632 - 62,470,899 (-)NCBI
MGSCv37462,114,768 - 62,131,906 (-)RGD
Celera461,122,835 - 61,141,038 (-)NCBI
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006538254   ⟹   XP_006538317
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,371,971 - 62,389,199 (-)NCBI
GRCm38462,453,734 - 62,470,962 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538257   ⟹   XP_006538320
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,366,890 - 62,389,202 (-)NCBI
GRCm38462,448,653 - 62,470,961 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538258   ⟹   XP_006538321
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,371,971 - 62,389,236 (-)NCBI
GRCm38462,453,734 - 62,470,999 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538259   ⟹   XP_006538322
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,371,971 - 62,389,236 (-)NCBI
GRCm38462,453,734 - 62,470,999 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030253780   ⟹   XP_030109640
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,371,971 - 62,389,200 (-)NCBI
GRCm38462,453,734 - 62,470,962 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164428   ⟹   XP_036020321
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,371,971 - 62,389,203 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004941962
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,366,890 - 62,389,236 (-)NCBI
Sequence:
RefSeq Acc Id: XR_390342
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39462,371,971 - 62,389,236 (-)NCBI
GRCm38462,453,734 - 62,470,999 (-)NCBI
Sequence:
RefSeq Acc Id: NP_076086   ⟸   NM_023597
- Peptide Label: isoform 1
- UniProtKB: Q3URZ0 (UniProtKB/Swiss-Prot),   Q9D3N4 (UniProtKB/Swiss-Prot),   Q9JHB4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006538320   ⟸   XM_006538257
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006538322   ⟸   XM_006538259
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006538321   ⟸   XM_006538258
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006538317   ⟸   XM_006538254
- Peptide Label: isoform X1
- UniProtKB: Q3URZ0 (UniProtKB/Swiss-Prot),   Q9D3N4 (UniProtKB/Swiss-Prot),   Q9JHB4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001277451   ⟸   NM_001290522
- Peptide Label: isoform 2
- UniProtKB: Q9JHB4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001277450   ⟸   NM_001290521
- Peptide Label: isoform 1
- UniProtKB: Q3URZ0 (UniProtKB/Swiss-Prot),   Q9D3N4 (UniProtKB/Swiss-Prot),   Q9JHB4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001342452   ⟸   NM_001355523
- Peptide Label: isoform 3
RefSeq Acc Id: XP_030109640   ⟸   XM_030253780
- Peptide Label: isoform X5
RefSeq Acc Id: ENSMUSP00000103076   ⟸   ENSMUST00000107452
RefSeq Acc Id: ENSMUSP00000120684   ⟸   ENSMUST00000132263
RefSeq Acc Id: ENSMUSP00000116182   ⟸   ENSMUST00000135811
RefSeq Acc Id: ENSMUSP00000112719   ⟸   ENSMUST00000120095
RefSeq Acc Id: ENSMUSP00000030087   ⟸   ENSMUST00000030087
RefSeq Acc Id: ENSMUSP00000123624   ⟸   ENSMUST00000155522
RefSeq Acc Id: XP_036020321   ⟸   XM_036164428
- Peptide Label: isoform X3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JHB4-F1-model_v2 AlphaFold Q9JHB4 1-367 view protein structure

Promoters
RGD ID:6836663
Promoter ID:MM_KWN:37957
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   Kidney,   MEF_B6
Transcripts:ENSMUST00000107452,   OTTMUST00000000685,   OTTMUST00000071861,   OTTMUST00000071862,   UC008TEV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36462,131,691 - 62,132,191 (-)MPROMDB
RGD ID:6883600
Promoter ID:EPDNEW_M5251
Type:initiation region
Name:Wdr31_1
Description:Mus musculus WD repeat domain 31 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38462,470,884 - 62,470,944EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1918604 AgrOrtholog
Ensembl Genes ENSMUSG00000028391 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000030087 ENTREZGENE
  ENSMUST00000030087.14 UniProtKB/Swiss-Prot
  ENSMUST00000107452 ENTREZGENE
  ENSMUST00000107452.8 UniProtKB/Swiss-Prot
  ENSMUST00000120095 ENTREZGENE
  ENSMUST00000120095.8 UniProtKB/Swiss-Prot
  ENSMUST00000132263.8 UniProtKB/TrEMBL
  ENSMUST00000135811.2 UniProtKB/TrEMBL
  ENSMUST00000146108 ENTREZGENE
  ENSMUST00000155522.8 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro G-protein_beta_WD-40_rep UniProtKB/Swiss-Prot
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/Swiss-Prot
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WDR31 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:71354 UniProtKB/Swiss-Prot
MGD MGI:1918604 ENTREZGENE
NCBI Gene 71354 ENTREZGENE
PANTHER PTHR19869 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD REPEAT-CONTAINING PROTEIN 31 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Wdr31 PhenoGen
PRINTS GPROTEINBRPT UniProtKB/Swiss-Prot
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot
SMART WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B7ZCH4_MOUSE UniProtKB/TrEMBL
  B7ZCH5_MOUSE UniProtKB/TrEMBL
  B7ZCH6_MOUSE UniProtKB/TrEMBL
  Q3URZ0 ENTREZGENE
  Q9D3N4 ENTREZGENE
  Q9JHB4 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3URZ0 UniProtKB/Swiss-Prot
  Q9D3N4 UniProtKB/Swiss-Prot