Gene: WDR31 (WD repeat domain 31) Chlorocebus sabaeus |
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Analyze |
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Symbol: |
WDR31 |
Name: |
WD repeat domain 31 |
RGD ID: |
18403612 |
Description: |
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Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
WD repeat-containing protein 31 |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
ChlSab1.1 - Green Monkey 1.1 Assembly |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 12 | 26,233,434 - 26,257,807 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 26,242,384 - 26,261,048 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666035 | 16,543,556 - 16,567,416 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
Comparative Map Data
WDR31 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 12 | 26,233,434 - 26,257,807 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 26,242,384 - 26,261,048 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666035 | 16,543,556 - 16,567,416 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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WDR31 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 9 | 113,313,222 - 113,340,275 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 113,313,222 - 113,340,298 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 116,075,502 - 116,102,555 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 115,117,751 - 115,142,388 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 113,157,484 - 113,182,121 | NCBI | | | | | Celera | 9 | 86,725,549 - 86,750,228 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q32 | NCBI | | | | | HuRef | 9 | 85,685,302 - 85,710,020 (-) | NCBI | | HuRef | | | CHM1_1 | 9 | 116,224,589 - 116,249,279 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 125,512,036 - 125,539,119 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Wdr31 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 62,366,890 - 62,389,236 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 62,366,890 - 62,389,133 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 62,448,653 - 62,470,999 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 62,448,653 - 62,470,896 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 62,114,768 - 62,131,906 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 61,940,095 - 61,957,233 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 61,123,938 - 61,141,015 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | B3 | NCBI | | | | | cM Map | 4 | 33.14 | NCBI | | | | |
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Wdr31 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 80,914,338 - 80,933,022 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 75,897,074 - 75,917,461 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 75,898,353 - 75,917,417 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 78,298,350 - 78,316,693 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 80,115,447 - 80,133,790 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 80,090,957 - 80,109,300 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 78,305,526 - 78,324,318 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 78,305,526 - 78,324,278 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 82,425,258 - 82,444,051 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 79,442,642 - 79,461,272 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 79,447,754 - 79,466,385 (-) | NCBI | | | | | Celera | 5 | 74,840,523 - 74,859,032 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q24 | NCBI | | | | |
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Wdr31 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955419 | 14,150,293 - 14,168,256 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955419 | 14,150,881 - 14,168,256 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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WDR31 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 11 | 26,032,727 - 26,064,646 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 26,035,105 - 26,066,996 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 84,413,199 - 84,442,635 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 112,787,170 - 112,813,503 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 112,787,170 - 112,813,503 (-) | Ensembl | panpan1.1 | | panPan2 | |
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WDR31 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 11 | 67,680,778 - 67,699,416 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 11 | 67,680,778 - 67,695,679 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 11 | 66,084,926 - 66,104,206 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 11 | 68,805,006 - 68,824,156 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 11 | 68,804,584 - 68,824,143 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 11 | 67,322,588 - 67,341,848 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 11 | 67,344,492 - 67,363,418 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 11 | 68,090,574 - 68,109,871 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Wdr31 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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WDR31 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 253,945,953 - 253,966,692 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 253,942,570 - 253,966,769 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 284,697,707 - 284,718,169 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Wdr31 (Heterocephalus glaber - naked mole-rat) |
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Expression
RNA-SEQ Expression
Sequence
Ensembl Acc Id: |
ENSCSAT00000010525 ⟹ ENSCSAP00000008618 |
Type: |
CODING |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source |
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ChlSab1.1 Ensembl | 12 | 26,242,384 - 26,261,048 (+) | Ensembl |
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RefSeq Acc Id: |
XM_007968362 ⟹ XP_007966553 |
Type: |
CODING |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source |
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ChlSab1.1 | 12 | 26,233,435 - 26,257,807 (+) | NCBI | Vero_WHO_p1.0 | NW_023666035 | 16,543,556 - 16,567,416 (-) | NCBI |
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Sequence: |
GCAAGACTCCGTATAATAAATAAATAAGTAAATAAATAAATGTTGGCTAGGATACCTGCCATTC ATTCATTAATTCAACAAACATTCAACAAGCCCCTACTATATACCAAGCCCCATACTGTGCACCA GGAATAGGGAGATGAAGAGACTCCAGTCTGGAAGCAAAGAGACTGCAGCTGTAAAAACTGTTAG TTTCTACAACTGTCTTCCCATTCGGATCTCAAGAAGGTACTGAGGGGTCTCTTCTTGCTATGGT ACTAGGCTGTAACGGCTCGATGAAAAAAATAATGAAAGGGATAGAGGAGTGGGGGGCTGGGAGA GTGTCCAAAGGAGGAATTTCTAGTCGAAATCAGGGAAACTCCAAAGAAACACGGCAACATGTAT ATCTGAGCGACTACTAATTTAAAAGGCGACCTTTATTAAGTGCTTTCTCAATAGCTATTACAAA GGTACCCGCTTTCTTTGGATTGTCTAGATTCTTCTGGCAACGTGGTCCTGGGCACAAGCGTCCT CTTCTCTGGACCTCATCAGTGCATTGTTACACGAAGAAAGTAGCACCGGGCGCTGAGTTCTGTC CCAGCTTTACGCTAGCGGAACTGCGGTTCGGCTGCCGGCGAGGGTGCCCGGAGGCTTTTCTTCA ACACTCCCACCCTAGCAACGTGCGCCTGCTGCTAGGGGCGGAGGCGGGGGAGGGCTCGGAGGCT GCTCACACCCGCCAGCTCCACGTTCCCGCCGGCCCCAGCTCCAGCCCCCGAGCCCGCCGTGCAA ACATGCTTAGACAGAGAAGAGATTAACTTCAGTGGCTTCCCACTAATTACAGAGATTAAGAAGT GCCTACCTGAATTATTTTCCAAAGGATACACATTACAAATTATTGTATAGGGGCAGCTCACCAA GAAGATCCTATTGGTTTGGGGGGAACGCAACTTCCAGCAGCCACAAGGAATGCTGCTACTCAGG TACCAACTGAAACAAGCTCTTCCACAGAAGGTTTGGTGTAGGTTTTGTGCCGTGATGGGGAAAC TGCAAAGCAAACTCAAACACAGCACTTACAAATACAGCAGGCCTGATGAAATTATAGAAGAGAG AATTCAGACTAAAGCTTTTCAAGAGTATAGCCCAGCTCACATGGATACCGTCTCTGTCGTTGCT GCTTTGAACTCAGATGTTTGTGTCTCTGGAGGGAAAGATAAGACAGTTGTGGCCTATAACTGGA AAACTGGAAATGTGGTGAAAAGGTTCAAAGGACATGAACATGAGATCACCAAGGTAACCTGTAT TCCCAATTCCAACCAGTTCTTCAGTGCCTCTCGTGACAGGATGGTCATGATGTGGGACTTGCAC GGTTCCTCACAACCAAGGCAGCAATTGTGTGGCCATGCCATGGTGGTCACCGGATTGGCTGTGA GTCCAGACTCATCACAGCTGTGCACTGGCTCTCGGGACAACACCCTGCTTCTGTGGGATGTGGT GACAGGACAGAGTGTGGAAAGAGCATCTGTCTCCAGAAACGTGGTCACTCACCTGTGCTGGGTC CCCAGAGAACCATACATACTACAGACCTCTGAAGATAAAACCCTCAGATTATGGGACAGTCGGG GGCTGCAGGTAGCTCATATGTTTCCTGCAAAGCAGTACATTCAGACCTACTGTGAAGTCAGTGT GGATGGACACAAGTGTGTCTCCTGCAGCAATGGCTTTGGAGGAGAAGGCTGTGAAGCCACGTTG TGGGACCTAAGACAGACTCGAAACAGAATATGTGAGTATAAGGGGCATTTCCAGACTGTTGCAT CCTGCGTCTTTCTACCAAGAGCATTGGCCTTGATGCCTTTAATTGCTACCTCATCACATGATTG CAAGGTGAAGATTTGGAACCAAGATACTGGAGCCTGCCTTTTCACCTTGTCTCTGGATGGATCA GGACCCTTGACTTCTCTGGCTGTTGGTGACGCCATCTCCTTATTGTGTGCAAGTTTTAACAGAG GAATTCACTTACTCAGAATGGACCACAGCCGAGGGCTGGAACTGCAGGAAGTGGCAGCATTCTG AGGCCAAGAGATACTCACTGGACAATATCAAACCATGGCCCTTTCTCAGCGTGGCTTTGTGTCT TTCCCAGTTATCTTGTGGGGAGTGGGATGTAGGGCTGGTATTCTTTGTTTAGGTTCACTTAGAA GAGGTATCAGTGTTGTAAGTCAAATAATTTAAGTCCAGTGATTCAAAATCAGGCATAGAGTCCA GAAACATGGACTACACATAAGGTTCTCTATTTAAGTTAAATACAAATGCAACTTTTTA
hide sequence
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RefSeq Acc Id: |
XM_007968365 ⟹ XP_007966556 |
Type: |
CODING |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source |
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ChlSab1.1 | 12 | 26,233,434 - 26,257,807 (+) | NCBI | Vero_WHO_p1.0 | NW_023666035 | 16,543,556 - 16,567,416 (-) | NCBI |
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Sequence: |
AGCAAGACTCCGTATAATAAATAAATAAGTAAATAAATAAATGTTGGCTAGGATACCTGCCATT CATTCATTAATTCAACAAACATTCAACAAGCCCCTACTATATACCAAGCCCCATACTGTGCACC AGGAATAGGGAGATGAAGAGACTCCAGTCTGGAAGCAAAGAGACTGCAGCTGTAAAAACTGTTA GTTTCTACAACTGTCTTCCCATTCGGATCTCAAGAAGGTACTGAGGGGTCTCTTCTTGCTATGG TACTAGGCTGTAACGGCTCGATGAAAAAAATAATGAAAGGGATAGAGGAGTGGGGGGCTGGGAG AGTGTCCAAAGGAGGAATTTCTAGTCGAAATCAGGGAAACTCCAAAGAAACACGGCAACATGTA TATCTGAGCGACTACTAATTTAAAAGGCGACCTTTATTAAGTGCTTTCTCAATAGCTATTACAA AGGTACCCGCTTTCTTTGGATTGTCTAGATTCTTCTGGCAACGTGGTCCTGGGCACAAGCGTCC TCTTCTCTGGACCTCATCAGTGCATTGTTACACGAAGAAAGTAGCACCGGGCGCTGAGTTCTGT CCCAGCTTTACGCTAGCGGAACTGCGGTTCGGCTGCCGGCGAGGGTGCCCGGAGGCTTTTCTTC AACACTCCCACCCTAGCAACGTGCGCCTGCTGCTAGGGGCGGAGGCGGGGGAGGGCTCGGAGGC TGCTCACACCCGCCAGCTCCACGTTCCCGCCGGCCCCAGCTCCAGCCCCCGAGCCCGCCGTGCA AACATGCTTAGACAGAGAAGAGATTAACTTCAGTGGCTTCCCACTAATTACAGAGATTAAGAAG TGCCTACCTGAATTATTTTCCAAAGGATACACATTACAAATTATTGTATAGGGGCAGCTCACCA AGAAGATCCTATTGGTTTGGGGGGAACGCAACTTCCAGCAGCCACAAGGAATGCTGCTACTCAG GTACCAACTGAAACAAGCTCTTCCACAGAAGGTTTGGTGTAGGTTTTGTGCCGTGATGGGGAAA CTGCAAAGCAAACTCAAACACAGCACTTACAAATACAGGCCTGATGAAATTATAGAAGAGAGAA TTCAGACTAAAGCTTTTCAAGAGTATAGCCCAGCTCACATGGATACCGTCTCTGTCGTTGCTGC TTTGAACTCAGATGTTTGTGTCTCTGGAGGGAAAGATAAGACAGTTGTGGCCTATAACTGGAAA ACTGGAAATGTGGTGAAAAGGTTCAAAGGACATGAACATGAGATCACCAAGGTAACCTGTATTC CCAATTCCAACCAGTTCTTCAGTGCCTCTCGTGACAGGATGGTCATGATGTGGGACTTGCACGG TTCCTCACAACCAAGGCAGCAATTGTGTGGCCATGCCATGGTGGTCACCGGATTGGCTGTGAGT CCAGACTCATCACAGCTGTGCACTGGCTCTCGGGACAACACCCTGCTTCTGTGGGATGTGGTGA CAGGACAGAGTGTGGAAAGAGCATCTGTCTCCAGAAACGTGGTCACTCACCTGTGCTGGGTCCC CAGAGAACCATACATACTACAGACCTCTGAAGATAAAACCCTCAGATTATGGGACAGTCGGGGG CTGCAGGTAGCTCATATGTTTCCTGCAAAGCAGTACATTCAGACCTACTGTGAAGTCAGTGTGG ATGGACACAAGTGTGTCTCCTGCAGCAATGGCTTTGGAGGAGAAGGCTGTGAAGCCACGTTGTG GGACCTAAGACAGACTCGAAACAGAATATGTGAGTATAAGGGGCATTTCCAGACTGTTGCATCC TGCGTCTTTCTACCAAGAGCATTGGCCTTGATGCCTTTAATTGCTACCTCATCACATGATTGCA AGGTGAAGATTTGGAACCAAGATACTGGAGCCTGCCTTTTCACCTTGTCTCTGGATGGATCAGG ACCCTTGACTTCTCTGGCTGTTGGTGACGCCATCTCCTTATTGTGTGCAAGTTTTAACAGAGGA ATTCACTTACTCAGAATGGACCACAGCCGAGGGCTGGAACTGCAGGAAGTGGCAGCATTCTGAG GCCAAGAGATACTCACTGGACAATATCAAACCATGGCCCTTTCTCAGCGTGGCTTTGTGTCTTT CCCAGTTATCTTGTGGGGAGTGGGATGTAGGGCTGGTATTCTTTGTTTAGGTTCACTTAGAAGA GGTATCAGTGTTGTAAGTCAAATAATTTAAGTCCAGTGATTCAAAATCAGGCATAGAGTCCAGA AACATGGACTACACATAAGGTTCTCTATTTAAGTTAAATACAAATGCAACTTTTTA
hide sequence
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RefSeq Acc Id: |
XM_037983837 ⟹ XP_037839765 |
Type: |
CODING |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source |
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Vero_WHO_p1.0 | NW_023666035 | 16,543,556 - 16,567,385 (-) | NCBI |
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RefSeq Acc Id: |
XM_037983845 ⟹ XP_037839773 |
Type: |
CODING |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source |
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Vero_WHO_p1.0 | NW_023666035 | 16,543,556 - 16,567,416 (-) | NCBI |
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RefSeq Acc Id: |
XP_007966556 ⟸ XM_007968365 |
- Peptide Label: |
isoform X2 |
RefSeq Acc Id: |
XP_007966553 ⟸ XM_007968362 |
- Peptide Label: |
isoform X1 |
- UniProtKB: |
A0A0D9RJ29 (UniProtKB/TrEMBL) |
Ensembl Acc Id: |
ENSCSAP00000008618 ⟸ ENSCSAT00000010525 |
RefSeq Acc Id: |
XP_037839773 ⟸ XM_037983845 |
- Peptide Label: |
isoform X3 |
RefSeq Acc Id: |
XP_037839765 ⟸ XM_037983837 |
- Peptide Label: |
isoform X1 |
- UniProtKB: |
A0A0D9RJ29 (UniProtKB/TrEMBL) |
Additional Information
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