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Gene: Wdr31 (WD repeat domain 31) Ictidomys tridecemlineatus

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Symbol:

Wdr31

Name:

WD repeat domain 31

RGD ID:

12441898

Description:

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

WD repeat domain 31, transcript variant X1; WD repeat domain 31, transcript variant X2; WD repeat domain 31, transcript variant X3; WD repeat domain 31, transcript variant X4; WD repeat-containing protein 31

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	WDR31 (WD repeat domain 31)	NCBI	Ortholog
Mus musculus (house mouse):	Wdr31 (WD repeat domain 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Wdr31 (WD repeat domain 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Wdr31 (WD repeat domain 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	WDR31 (WD repeat domain 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	WDR31 (WD repeat domain 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	WDR31 (WD repeat domain 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	WDR31 (WD repeat domain 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Wdr31 (WD repeat domain 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,614 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936559	270,272 - 288,214 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936559	269,005 - 288,159 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Wdr31
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,614 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936559	270,272 - 288,214 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936559	269,005 - 288,159 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WDR31
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	113,313,222 - 113,340,275 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	113,313,222 - 113,340,298 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	116,075,502 - 116,102,555 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	115,117,751 - 115,142,388 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	113,157,484 - 113,182,121	NCBI
Celera	9	86,725,549 - 86,750,228 (-)	NCBI		Celera
Cytogenetic Map	9	q32	NCBI
HuRef	9	85,685,302 - 85,710,020 (-)	NCBI		HuRef
CHM1_1	9	116,224,589 - 116,249,279 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	125,512,036 - 125,539,119 (-)	NCBI		T2T-CHM13v2.0

Wdr31
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	62,366,890 - 62,389,236 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	62,366,890 - 62,389,133 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	62,448,653 - 62,470,999 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	62,448,653 - 62,470,896 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	62,114,768 - 62,131,906 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	61,940,095 - 61,957,233 (-)	NCBI		MGSCv36	mm8
Celera	4	61,123,938 - 61,141,015 (-)	NCBI		Celera
Cytogenetic Map	4	B3	NCBI
cM Map	4	33.14	NCBI

Wdr31
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	80,914,338 - 80,933,022 (-)	NCBI		GRCr8
mRatBN7.2	5	75,897,074 - 75,917,461 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	75,898,353 - 75,917,417 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	78,298,350 - 78,316,693 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	80,115,447 - 80,133,790 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	80,090,957 - 80,109,300 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	78,305,526 - 78,324,318 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	78,305,526 - 78,324,278 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	82,425,258 - 82,444,051 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	79,442,642 - 79,461,272 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	79,447,754 - 79,466,385 (-)	NCBI
Celera	5	74,840,523 - 74,859,032 (-)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

Wdr31
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	14,150,293 - 14,168,256 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	14,150,881 - 14,168,256 (+)	NCBI	ChiLan1.0	ChiLan1.0

WDR31
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	26,032,727 - 26,064,646 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	26,035,105 - 26,066,996 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	84,413,199 - 84,442,635 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	112,787,170 - 112,813,503 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	112,787,170 - 112,813,503 (-)	Ensembl	panpan1.1		panPan2

WDR31
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	67,680,778 - 67,699,416 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	67,680,778 - 67,695,679 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	66,084,926 - 66,104,206 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	68,805,006 - 68,824,156 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	68,804,584 - 68,824,143 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	67,322,588 - 67,341,848 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	67,344,492 - 67,363,418 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	68,090,574 - 68,109,871 (-)	NCBI		UU_Cfam_GSD_1.0

WDR31
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	253,945,953 - 253,966,692 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	253,942,570 - 253,966,769 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	284,697,707 - 284,718,169 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

WDR31
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	26,233,434 - 26,257,807 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	26,242,384 - 26,261,048 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	16,543,556 - 16,567,416 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Wdr31
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	21,764,839 - 21,780,561 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	21,760,148 - 21,781,027 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005329686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005329687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040286175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040286176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040286177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040286178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040286179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000000573 ⟹ ENSSTOP00000000519

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936559	270,272 - 288,214 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000039394 ⟹ ENSSTOP00000028814

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936559	280,638 - 287,278 (+)	Ensembl

RefSeq Acc Id:

XM_005329686 ⟹ XP_005329743

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,614 (-)	NCBI
SpeTri2.0	NW_004936559	269,005 - 288,159 (+)	NCBI

Sequence:

show sequence

GAGGGCTGCGGATGCTCTGCGGCTCCGTGGCTCCGCCGGCCCGGCGCCAGCCTGACCCAGCTGC
AGAGATTAGGAAGTGGCTGCCTGAATTATTTTCCAAAGTATAAACATTACAAATAATTAAAAAC
GCAACTCACCAGAAGATCCTTTTGATTTGGGGGAAACACAACTTCCATCAACCACAAGGGATGC
TACTACTCAGATGCCACCTGAAACACACTCCTCTTTCTCAGGCTTCGTGTGGGCTCTGTGCCAT
AATGGGGAAACTGCAGAGCAAACTCAAACACAGCAGTTACAAATACAGCAGGCCTGACGGAATC
ATGGAAGAGAGAATTCAAACTAAAGCTTCTCAAGAGTATAGCCCCGCTCATGTGGACGCTGTCT
CTGCCGTTGCTGCTCTGAACTCAGACCTTTGTGTCTCTGGAGGAAAAGATAAGACAGTCGTGGC
CTATAATTGGAAAACTGGAAACGTGGTGAAGAGGTTCAAAGGACATGAACGTGAAATCACCAAG
GTGGCCTGCAGTCCCCGGTCGGGCCAGTTCTTCAGCGCCTCTCGGGACAGGCGGGTCCTGATGT
GGGACTTGCACGAGGCCTCCCAGCCCAGGCAGCAGCTGTGCGGCCACGCTCTGGCGGTCACCGG
CTTGGCCGTGAGTCCAGACGCGTCCCACCTGTGCACTGGCTCTCGGGACAACGCCCTGCTTCTG
TGGGACGTGGGGACCGGACGGTGTGTGGAGAGAGCCTCGGTCTCCAGGAACCTGGTCACTCACC
TGTGCTGGGTCCCCAGTGAACCATATATCCTGCAGTCCTCTGAAGATAAAACCATCAGACTATG
GGACAGTCGGGGGCTACAGGTGGCTCACATGTTTCCCACAAAGCAACACATTCAGACCTACTGT
GAGGTCAGCATGGATGGTCACAAGTGCATCTCCTGCAGCAACGGTTTTGGAGGCGAAGGCTGTG
AAGCCACATTGTGGGACCTAAGGCAGACAAGAAGCAGAATACGTGAGTATAAGGGGCATTTCCA
GACAGTTGCATCCTGTGTTTTTCTACCAAGAACATTGGCCTTGGTGCCTGCGATTGCTACCTCA
TCCCATGATTCCAAGGTGAAGATATGGAACCAAGATACTGGAGCCTGCCTTTTCACCTTGTCTC
TGGATGGATCTGGACCCTTAACTTCCCTGGCTGTTGGTGATCCCATCTCCTTATTATGTGCAAG
TTTCAACAGAGGAATTCACCTACTCAGAGTGGACCACAGCCGAGGGCTGGAACTGGAGGAAGTG
GCAGCATTCTGAAGCCGAGAGACATTCACCAAACAATATCAAACCATGGCCCTCTGTGTGGCTT
TGTTTTTCCATGTTTTATCTTGGGGCAGGTGGAATATAGGGCTGGTGTTCTTTACTTAGGTTTA
CTTAGAAGGTATATCAGTGTTAGAAGTCAATTTAAGTTCAGTGGTTCAAAATCAGGTATGAAAT
TTAGAAACACGGACTAAACATAAAGTTTACAATCTAAGTTAAACCCAAATGCAGTGTTTTAGTG
AGCATTTGGGACGACTCTTCAGGGAAAAAAAAATGTTTATTCAAAATGATGATCTAAAGATATA
GGAGTGATGGACCTGTGACTGTGAGAAGAAGCATGGAGCTTGATTCCATCCGTCTCTCCACAAA
AATAAATAAATAGATAGATAGATAAGAAGAAATAAAAGGCAACAGGAATAGAATCTGCTTTAGT
TGCCTCAGAAAATAATTGAGATGGGAAAGTAGCTTGGCCCATAGAGGATATGGATCGTCTACAT
AGTTTAAGCTCTGGGCATCGCTCCTCAGCACCGAAGGATCAAAGCTGGGGGGGAAAGCCAAAGC
CTCGGCTTCTACCCAGAGCAGGGGAGGTGGTAAACCCCTGCCCTTGCATGTGCCTTCCTAGACC
AGCGCTGCTGAAGTGCTTCAAGAGGCTGACCAGCACAAGGACATCACCCAGATCATAAGAGTTA
GCTCATTTCCATGGATAAGAAAATGGACAGAGATTAAGGTTGAAAAAGTATATTTGTAATTTGA
ATATTT

hide sequence

RefSeq Acc Id:

XM_005329687 ⟹ XP_005329744

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,614 (-)	NCBI
SpeTri2.0	NW_004936559	269,005 - 288,159 (+)	NCBI

Sequence:

show sequence

GAGGGCTGCGGATGCTCTGCGGCTCCGTGGCTCCGCCGGCCCGGCGCCAGCCTGACCCAGCTGC
AGAGATTAGGAAGTGGCTGCCTGAATTATTTTCCAAAGTATAAACATTACAAATAATTAAAAAC
GCAACTCACCAGAAGATCCTTTTGATTTGGGGGAAACACAACTTCCATCAACCACAAGGGATGC
TACTACTCAGATGCCACCTGAAACACACTCCTCTTTCTCAGGCTTCGTGTGGGCTCTGTGCCAT
AATGGGGAAACTGCAGAGCAAACTCAAACACAGCAGTTACAAATACAGGCCTGACGGAATCATG
GAAGAGAGAATTCAAACTAAAGCTTCTCAAGAGTATAGCCCCGCTCATGTGGACGCTGTCTCTG
CCGTTGCTGCTCTGAACTCAGACCTTTGTGTCTCTGGAGGAAAAGATAAGACAGTCGTGGCCTA
TAATTGGAAAACTGGAAACGTGGTGAAGAGGTTCAAAGGACATGAACGTGAAATCACCAAGGTG
GCCTGCAGTCCCCGGTCGGGCCAGTTCTTCAGCGCCTCTCGGGACAGGCGGGTCCTGATGTGGG
ACTTGCACGAGGCCTCCCAGCCCAGGCAGCAGCTGTGCGGCCACGCTCTGGCGGTCACCGGCTT
GGCCGTGAGTCCAGACGCGTCCCACCTGTGCACTGGCTCTCGGGACAACGCCCTGCTTCTGTGG
GACGTGGGGACCGGACGGTGTGTGGAGAGAGCCTCGGTCTCCAGGAACCTGGTCACTCACCTGT
GCTGGGTCCCCAGTGAACCATATATCCTGCAGTCCTCTGAAGATAAAACCATCAGACTATGGGA
CAGTCGGGGGCTACAGGTGGCTCACATGTTTCCCACAAAGCAACACATTCAGACCTACTGTGAG
GTCAGCATGGATGGTCACAAGTGCATCTCCTGCAGCAACGGTTTTGGAGGCGAAGGCTGTGAAG
CCACATTGTGGGACCTAAGGCAGACAAGAAGCAGAATACGTGAGTATAAGGGGCATTTCCAGAC
AGTTGCATCCTGTGTTTTTCTACCAAGAACATTGGCCTTGGTGCCTGCGATTGCTACCTCATCC
CATGATTCCAAGGTGAAGATATGGAACCAAGATACTGGAGCCTGCCTTTTCACCTTGTCTCTGG
ATGGATCTGGACCCTTAACTTCCCTGGCTGTTGGTGATCCCATCTCCTTATTATGTGCAAGTTT
CAACAGAGGAATTCACCTACTCAGAGTGGACCACAGCCGAGGGCTGGAACTGGAGGAAGTGGCA
GCATTCTGAAGCCGAGAGACATTCACCAAACAATATCAAACCATGGCCCTCTGTGTGGCTTTGT
TTTTCCATGTTTTATCTTGGGGCAGGTGGAATATAGGGCTGGTGTTCTTTACTTAGGTTTACTT
AGAAGGTATATCAGTGTTAGAAGTCAATTTAAGTTCAGTGGTTCAAAATCAGGTATGAAATTTA
GAAACACGGACTAAACATAAAGTTTACAATCTAAGTTAAACCCAAATGCAGTGTTTTAGTGAGC
ATTTGGGACGACTCTTCAGGGAAAAAAAAATGTTTATTCAAAATGATGATCTAAAGATATAGGA
GTGATGGACCTGTGACTGTGAGAAGAAGCATGGAGCTTGATTCCATCCGTCTCTCCACAAAAAT
AAATAAATAGATAGATAGATAAGAAGAAATAAAAGGCAACAGGAATAGAATCTGCTTTAGTTGC
CTCAGAAAATAATTGAGATGGGAAAGTAGCTTGGCCCATAGAGGATATGGATCGTCTACATAGT
TTAAGCTCTGGGCATCGCTCCTCAGCACCGAAGGATCAAAGCTGGGGGGGAAAGCCAAAGCCTC
GGCTTCTACCCAGAGCAGGGGAGGTGGTAAACCCCTGCCCTTGCATGTGCCTTCCTAGACCAGC
GCTGCTGAAGTGCTTCAAGAGGCTGACCAGCACAAGGACATCACCCAGATCATAAGAGTTAGCT
CATTTCCATGGATAAGAAAATGGACAGAGATTAAGGTTGAAAAAGTATATTTGTAATTTGAATA
TTT

hide sequence

RefSeq Acc Id:

XM_021729354 ⟹ XP_021585029

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,596 (-)	NCBI
SpeTri2.0	NW_004936559	269,008 - 288,159 (+)	NCBI

Sequence:

show sequence

GGCTGCGGATGCTCTGCGGCTCCGTGGCTCCGCCGGCCCGGCGCCAGCCTGACCCAGCTGCAGG
AAACACAACTTCCATCAACCACAAGGGATGCTACTACTCAGATGCCACCTGAAACACACTCCTC
TTTCTCAGGCTTCGTGTGGGCTCTGTGCCATAATGGGGAAACTGCAGAGCAAACTCAAACACAG
CAGTTACAAATACAGCAGGCCTGACGGAATCATGGAAGAGAGAATTCAAACTAAAGCTTCTCAA
GAGTATAGCCCCGCTCATGTGGACGCTGTCTCTGCCGTTGCTGCTCTGAACTCAGACCTTTGTG
TCTCTGGAGGAAAAGATAAGACAGTCGTGGCCTATAATTGGAAAACTGGAAACGTGGTGAAGAG
GTTCAAAGGACATGAACGTGAAATCACCAAGGTGGCCTGCAGTCCCCGGTCGGGCCAGTTCTTC
AGCGCCTCTCGGGACAGGCGGGTCCTGATGTGGGACTTGCACGAGGCCTCCCAGCCCAGGCAGC
AGCTGTGCGGCCACGCTCTGGCGGTCACCGGCTTGGCCGTGAGTCCAGACGCGTCCCACCTGTG
CACTGGCTCTCGGGACAACGCCCTGCTTCTGTGGGACGTGGGGACCGGACGGTGTGTGGAGAGA
GCCTCGGTCTCCAGGAACCTGGTCACTCACCTGTGCTGGGTCCCCAGTGAACCATATATCCTGC
AGTCCTCTGAAGATAAAACCATCAGACTATGGGACAGTCGGGGGCTACAGGTGGCTCACATGTT
TCCCACAAAGCAACACATTCAGACCTACTGTGAGGTCAGCATGGATGGTCACAAGTGCATCTCC
TGCAGCAACGGTTTTGGAGGCGAAGGCTGTGAAGCCACATTGTGGGACCTAAGGCAGACAAGAA
GCAGAATACGTGAGTATAAGGGGCATTTCCAGACAGTTGCATCCTGTGTTTTTCTACCAAGAAC
ATTGGCCTTGGTGCCTGCGATTGCTACCTCATCCCATGATTCCAAGGTGAAGATATGGAACCAA
GATACTGGAGCCTGCCTTTTCACCTTGTCTCTGGATGGATCTGGACCCTTAACTTCCCTGGCTG
TTGGTGATCCCATCTCCTTATTATGTGCAAGTTTCAACAGAGGAATTCACCTACTCAGAGTGGA
CCACAGCCGAGGGCTGGAACTGGAGGAAGTGGCAGCATTCTGAAGCCGAGAGACATTCACCAAA
CAATATCAAACCATGGCCCTCTGTGTGGCTTTGTTTTTCCATGTTTTATCTTGGGGCAGGTGGA
ATATAGGGCTGGTGTTCTTTACTTAGGTTTACTTAGAAGGTATATCAGTGTTAGAAGTCAATTT
AAGTTCAGTGGTTCAAAATCAGGTATGAAATTTAGAAACACGGACTAAACATAAAGTTTACAAT
CTAAGTTAAACCCAAATGCAGTGTTTTAGTGAGCATTTGGGACGACTCTTCAGGGAAAAAAAAA
TGTTTATTCAAAATGATGATCTAAAGATATAGGAGTGATGGACCTGTGACTGTGAGAAGAAGCA
TGGAGCTTGATTCCATCCGTCTCTCCACAAAAATAAATAAATAGATAGATAGATAAGAAGAAAT
AAAAGGCAACAGGAATAGAATCTGCTTTAGTTGCCTCAGAAAATAATTGAGATGGGAAAGTAGC
TTGGCCCATAGAGGATATGGATCGTCTACATAGTTTAAGCTCTGGGCATCGCTCCTCAGCACCG
AAGGATCAAAGCTGGGGGGGAAAGCCAAAGCCTCGGCTTCTACCCAGAGCAGGGGAGGTGGTAA
ACCCCTGCCCTTGCATGTGCCTTCCTAGACCAGCGCTGCTGAAGTGCTTCAAGAGGCTGACCAG
CACAAGGACATCACCCAGATCATAAGAGTTAGCTCATTTCCATGGATAAGAAAATGGACAGAGA
TTAAGGTTGAAAAAGTATATTTGTAATTTGAATATTT

hide sequence

RefSeq Acc Id:

XM_021729355 ⟹ XP_021585030

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,614 (-)	NCBI
SpeTri2.0	NW_004936559	269,005 - 288,159 (+)	NCBI

Sequence:

show sequence

GAGGGCTGCGGATGCTCTGCGGCTCCGTGGCTCCGCCGGCCCGGCGCCAGCCTGACCCAGCTGC
AGAGATTAGGAAGTGGCTGCCTGAATTATTTTCCAAAGTATAAACATTACAAATAATTAAAAAC
GCAACTCACCAGAAGATCCTTTTGATTTGGGGCAGGCCTGACGGAATCATGGAAGAGAGAATTC
AAACTAAAGCTTCTCAAGAGTATAGCCCCGCTCATGTGGACGCTGTCTCTGCCGTTGCTGCTCT
GAACTCAGACCTTTGTGTCTCTGGAGGAAAAGATAAGACAGTCGTGGCCTATAATTGGAAAACT
GGAAACGTGGTGAAGAGGTTCAAAGGACATGAACGTGAAATCACCAAGGTGGCCTGCAGTCCCC
GGTCGGGCCAGTTCTTCAGCGCCTCTCGGGACAGGCGGGTCCTGATGTGGGACTTGCACGAGGC
CTCCCAGCCCAGGCAGCAGCTGTGCGGCCACGCTCTGGCGGTCACCGGCTTGGCCGTGAGTCCA
GACGCGTCCCACCTGTGCACTGGCTCTCGGGACAACGCCCTGCTTCTGTGGGACGTGGGGACCG
GACGGTGTGTGGAGAGAGCCTCGGTCTCCAGGAACCTGGTCACTCACCTGTGCTGGGTCCCCAG
TGAACCATATATCCTGCAGTCCTCTGAAGATAAAACCATCAGACTATGGGACAGTCGGGGGCTA
CAGGTGGCTCACATGTTTCCCACAAAGCAACACATTCAGACCTACTGTGAGGTCAGCATGGATG
GTCACAAGTGCATCTCCTGCAGCAACGGTTTTGGAGGCGAAGGCTGTGAAGCCACATTGTGGGA
CCTAAGGCAGACAAGAAGCAGAATACGTGAGTATAAGGGGCATTTCCAGACAGTTGCATCCTGT
GTTTTTCTACCAAGAACATTGGCCTTGGTGCCTGCGATTGCTACCTCATCCCATGATTCCAAGG
TGAAGATATGGAACCAAGATACTGGAGCCTGCCTTTTCACCTTGTCTCTGGATGGATCTGGACC
CTTAACTTCCCTGGCTGTTGGTGATCCCATCTCCTTATTATGTGCAAGTTTCAACAGAGGAATT
CACCTACTCAGAGTGGACCACAGCCGAGGGCTGGAACTGGAGGAAGTGGCAGCATTCTGAAGCC
GAGAGACATTCACCAAACAATATCAAACCATGGCCCTCTGTGTGGCTTTGTTTTTCCATGTTTT
ATCTTGGGGCAGGTGGAATATAGGGCTGGTGTTCTTTACTTAGGTTTACTTAGAAGGTATATCA
GTGTTAGAAGTCAATTTAAGTTCAGTGGTTCAAAATCAGGTATGAAATTTAGAAACACGGACTA
AACATAAAGTTTACAATCTAAGTTAAACCCAAATGCAGTGTTTTAGTGAGCATTTGGGACGACT
CTTCAGGGAAAAAAAAATGTTTATTCAAAATGATGATCTAAAGATATAGGAGTGATGGACCTGT
GACTGTGAGAAGAAGCATGGAGCTTGATTCCATCCGTCTCTCCACAAAAATAAATAAATAGATA
GATAGATAAGAAGAAATAAAAGGCAACAGGAATAGAATCTGCTTTAGTTGCCTCAGAAAATAAT
TGAGATGGGAAAGTAGCTTGGCCCATAGAGGATATGGATCGTCTACATAGTTTAAGCTCTGGGC
ATCGCTCCTCAGCACCGAAGGATCAAAGCTGGGGGGGAAAGCCAAAGCCTCGGCTTCTACCCAG
AGCAGGGGAGGTGGTAAACCCCTGCCCTTGCATGTGCCTTCCTAGACCAGCGCTGCTGAAGTGC
TTCAAGAGGCTGACCAGCACAAGGACATCACCCAGATCATAAGAGTTAGCTCATTTCCATGGAT
AAGAAAATGGACAGAGATTAAGGTTGAAAAAGTATATTTGTAATTTGAATATTT

hide sequence

RefSeq Acc Id:

XM_040286175 ⟹ XP_040142109

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,587 (-)	NCBI

RefSeq Acc Id:

XM_040286176 ⟹ XP_040142110

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,614 (-)	NCBI

RefSeq Acc Id:

XM_040286177 ⟹ XP_040142111

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,614 (-)	NCBI

RefSeq Acc Id:

XM_040286178 ⟹ XP_040142112

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,587 (-)	NCBI

RefSeq Acc Id:

XM_040286179 ⟹ XP_040142113

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	182,978,352 - 182,997,614 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005329743	(Get FASTA)	NCBI Sequence Viewer
	XP_005329744	(Get FASTA)	NCBI Sequence Viewer
	XP_021585029	(Get FASTA)	NCBI Sequence Viewer
	XP_021585030	(Get FASTA)	NCBI Sequence Viewer
	XP_040142109	(Get FASTA)	NCBI Sequence Viewer
	XP_040142110	(Get FASTA)	NCBI Sequence Viewer
	XP_040142111	(Get FASTA)	NCBI Sequence Viewer
	XP_040142112	(Get FASTA)	NCBI Sequence Viewer
	XP_040142113	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000000519.3
	ENSSTOP00000028814.1
GenBank Protein	KAG3287758	(Get FASTA)	NCBI Sequence Viewer
	KAG3287759	(Get FASTA)	NCBI Sequence Viewer
	KAG3287760	(Get FASTA)	NCBI Sequence Viewer
	KAG3287761	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005329743 ⟸ XM_005329686
- Peptide Label:	isoform X1
- UniProtKB:	I3LWX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLLLRCHLKHTPLSQASCGLCAIMGKLQSKLKHSSYKYSRPDGIMEERIQTKASQEYSPAHVDA VSAVAALNSDLCVSGGKDKTVVAYNWKTGNVVKRFKGHEREITKVACSPRSGQFFSASRDRRVL MWDLHEASQPRQQLCGHALAVTGLAVSPDASHLCTGSRDNALLLWDVGTGRCVERASVSRNLVT HLCWVPSEPYILQSSEDKTIRLWDSRGLQVAHMFPTKQHIQTYCEVSMDGHKCISCSNGFGGEG CEATLWDLRQTRSRIREYKGHFQTVASCVFLPRTLALVPAIATSSHDSKVKIWNQDTGACLFTL SLDGSGPLTSLAVGDPISLLCASFNRGIHLLRVDHSRGLELEEVAAF hide sequence

RefSeq Acc Id:

XP_005329744 ⟸ XM_005329687

- Peptide Label:

isoform X2

- Sequence:

show sequence

MLLLRCHLKHTPLSQASCGLCAIMGKLQSKLKHSSYKYRPDGIMEERIQTKASQEYSPAHVDAV
SAVAALNSDLCVSGGKDKTVVAYNWKTGNVVKRFKGHEREITKVACSPRSGQFFSASRDRRVLM
WDLHEASQPRQQLCGHALAVTGLAVSPDASHLCTGSRDNALLLWDVGTGRCVERASVSRNLVTH
LCWVPSEPYILQSSEDKTIRLWDSRGLQVAHMFPTKQHIQTYCEVSMDGHKCISCSNGFGGEGC
EATLWDLRQTRSRIREYKGHFQTVASCVFLPRTLALVPAIATSSHDSKVKIWNQDTGACLFTLS
LDGSGPLTSLAVGDPISLLCASFNRGIHLLRVDHSRGLELEEVAAF

hide sequence

RefSeq Acc Id:

XP_021585030 ⟸ XM_021729355

- Peptide Label:

isoform X3

- Sequence:

show sequence

MEERIQTKASQEYSPAHVDAVSAVAALNSDLCVSGGKDKTVVAYNWKTGNVVKRFKGHEREITK
VACSPRSGQFFSASRDRRVLMWDLHEASQPRQQLCGHALAVTGLAVSPDASHLCTGSRDNALLL
WDVGTGRCVERASVSRNLVTHLCWVPSEPYILQSSEDKTIRLWDSRGLQVAHMFPTKQHIQTYC
EVSMDGHKCISCSNGFGGEGCEATLWDLRQTRSRIREYKGHFQTVASCVFLPRTLALVPAIATS
SHDSKVKIWNQDTGACLFTLSLDGSGPLTSLAVGDPISLLCASFNRGIHLLRVDHSRGLELEEV
AAF

hide sequence

RefSeq Acc Id:	XP_021585029 ⟸ XM_021729354
- Peptide Label:	isoform X1
- UniProtKB:	I3LWX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLLLRCHLKHTPLSQASCGLCAIMGKLQSKLKHSSYKYSRPDGIMEERIQTKASQEYSPAHVDA VSAVAALNSDLCVSGGKDKTVVAYNWKTGNVVKRFKGHEREITKVACSPRSGQFFSASRDRRVL MWDLHEASQPRQQLCGHALAVTGLAVSPDASHLCTGSRDNALLLWDVGTGRCVERASVSRNLVT HLCWVPSEPYILQSSEDKTIRLWDSRGLQVAHMFPTKQHIQTYCEVSMDGHKCISCSNGFGGEG CEATLWDLRQTRSRIREYKGHFQTVASCVFLPRTLALVPAIATSSHDSKVKIWNQDTGACLFTL SLDGSGPLTSLAVGDPISLLCASFNRGIHLLRVDHSRGLELEEVAAF hide sequence

RefSeq Acc Id:	XP_040142113 ⟸ XM_040286179
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_040142110 ⟸ XM_040286176
- Peptide Label:	isoform X1
- UniProtKB:	I3LWX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040142111 ⟸ XM_040286177
- Peptide Label:	isoform X1
- UniProtKB:	I3LWX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040142109 ⟸ XM_040286175
- Peptide Label:	isoform X1
- UniProtKB:	I3LWX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040142112 ⟸ XM_040286178
- Peptide Label:	isoform X1
- UniProtKB:	I3LWX9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000028814 ⟸ ENSSTOT00000039394

Ensembl Acc Id:

ENSSTOP00000000519 ⟸ ENSSTOT00000000573

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000000576	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000000573.3	UniProtKB/TrEMBL
	ENSSTOT00000039394.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
InterPro	G-protein_beta_WD-40_rep	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_CS	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
	WDR31	UniProtKB/TrEMBL
NCBI Gene	Wdr31	ENTREZGENE
PANTHER	PTHR19869	UniProtKB/TrEMBL
	WD REPEAT-CONTAINING PROTEIN 31	UniProtKB/TrEMBL
Pfam	WD40	UniProtKB/TrEMBL
PRINTS	GPROTEINBRPT	UniProtKB/TrEMBL
PROSITE	WD_REPEATS_1	UniProtKB/TrEMBL
	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
SMART	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50978	UniProtKB/TrEMBL
UniProt	A0A287D5L5_ICTTR	UniProtKB/TrEMBL
	I3LWX9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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