Symbol:
Scmh1
Name:
Scm polycomb group homolog 1 (Ensembl:sex comb on midleg homolog 1)
RGD ID:
1314032
MGI Page
MGI
Description:
Predicted to enable chromatin binding activity and histone binding activity. Acts upstream of or within anterior/posterior pattern specification; chromatin remodeling; and spermatogenesis. Located in chromocenter and male germ cell nucleus. Is expressed in several structures, including branchial arch; genitourinary system; gut; limb; and nervous system. Orthologous to human SCMH1 (Scm polycomb group protein homolog 1).
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
AI315320; AI851618; polycomb protein SCMH1; Scm; Scml1; Scml3; sex comb on midleg 1; sex comb on midleg homolog 1; sex comb on midleg-like 1; sex comb on midleg-like 3
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
SCMH1 (Scm polycomb group protein homolog 1) HGNC
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):
Scmh1 (Scm polycomb group protein homolog 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Scmh1 (Scm polycomb group protein homolog 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
SCMH1 (Scm polycomb group protein homolog 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
SCMH1 (Scm polycomb group protein homolog 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Scmh1 (Scm polycomb group protein homolog 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
SCMH1 (Scm polycomb group protein homolog 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
SCMH1 (Scm polycomb group protein homolog 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Scmh1 (Scm polycomb group protein homolog 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Rattus norvegicus (Norway rat):
Scmh1 (Scm polycomb group protein homolog 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
SCMH1 (Scm polycomb group protein homolog 1)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
scmh1 (Scm polycomb group protein homolog 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
Scm
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
scmh1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB)
Latest Assembly:
GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 120,262,347 - 120,387,397 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 120,262,478 - 120,387,383 (+) Ensembl GRCm39 Ensembl GRCm38 4 120,405,150 - 120,530,200 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 120,405,281 - 120,530,186 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 120,077,886 - 120,202,804 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 119,903,044 - 120,027,590 (+) NCBI MGSCv36 mm8 Celera 4 119,122,290 - 119,247,186 (+) NCBI Celera Cytogenetic Map 4 D2.1 NCBI cM Map 4 56.52 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Scmh1 Mouse 1,2-dimethylhydrazine increases expression EXP 6480464 1 and 2-Dimethylhydrazine results in increased expression of SCMH1 mRNA CTD PMID:22206623 Scmh1 Mouse 1,2-dimethylhydrazine multiple interactions EXP 6480464 Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of SCMH1 mRNA] CTD PMID:22206623 Scmh1 Mouse 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of SCMH1 mRNA CTD PMID:21570461 Scmh1 Mouse 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of SCMH1 mRNA CTD PMID:32553695 Scmh1 Mouse 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO SCMH1 (Homo sapiens) 6480464 Tetrachlorodibenzodioxin results in decreased expression of SCMH1 mRNA CTD PMID:20106945 and PMID:21632981 Scmh1 Mouse 3',5'-cyclic UMP affects binding ISO SCMH1 (Homo sapiens) 6480464 SCMH1 protein binds to cyclic 3' and 5'-uridine monophosphate CTD PMID:30528433 Scmh1 Mouse 3,4-methylenedioxymethamphetamine increases expression EXP 6480464 N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of SCMH1 mRNA CTD PMID:20188158 Scmh1 Mouse 3-isobutyl-1-methyl-7H-xanthine multiple interactions ISO SCMH1 (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of SCMH1 mRNA CTD PMID:28628672 Scmh1 Mouse 7,12-dimethyltetraphene increases expression EXP 6480464 9 more ... CTD PMID:32553695 Scmh1 Mouse acetamide increases expression ISO Scmh1 (Rattus norvegicus) 6480464 acetamide results in increased expression of SCMH1 mRNA CTD PMID:31881176 Scmh1 Mouse acrylamide decreases expression ISO SCMH1 (Homo sapiens) 6480464 Acrylamide results in decreased expression of SCMH1 mRNA CTD PMID:32763439 Scmh1 Mouse all-trans-retinoic acid increases expression ISO SCMH1 (Homo sapiens) 6480464 Tretinoin results in increased expression of SCMH1 mRNA CTD PMID:21934132 Scmh1 Mouse amphetamine decreases expression ISO Scmh1 (Rattus norvegicus) 6480464 Amphetamine results in decreased expression of SCMH1 mRNA CTD PMID:30779732 Scmh1 Mouse aristolochic acid A decreases expression ISO SCMH1 (Homo sapiens) 6480464 aristolochic acid I results in decreased expression of SCMH1 mRNA CTD PMID:33212167 Scmh1 Mouse benzo[a]pyrene decreases expression ISO SCMH1 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of SCMH1 mRNA CTD PMID:20106945 and PMID:21632981 Scmh1 Mouse benzo[a]pyrene affects methylation ISO SCMH1 (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of SCMH1 5' UTR CTD PMID:27901495 Scmh1 Mouse benzo[a]pyrene increases expression EXP 6480464 Benzo(a)pyrene metabolite results in increased expression of SCMH1 mRNA CTD PMID:32553695 Scmh1 Mouse benzo[e]pyrene increases methylation ISO SCMH1 (Homo sapiens) 6480464 benzo(e)pyrene results in increased methylation of SCMH1 promoter CTD PMID:30157460 Scmh1 Mouse bisphenol A affects expression ISO Scmh1 (Rattus norvegicus) 6480464 bisphenol A affects the expression of SCMH1 mRNA CTD PMID:25181051 Scmh1 Mouse bisphenol A increases expression ISO SCMH1 (Homo sapiens) 6480464 bisphenol A results in increased expression of SCMH1 mRNA CTD PMID:29275510 Scmh1 Mouse bisphenol A affects methylation EXP 6480464 bisphenol A affects the methylation of SCMH1 promoter CTD PMID:27334623 Scmh1 Mouse bisphenol A increases methylation ISO Scmh1 (Rattus norvegicus) 6480464 bisphenol A results in increased methylation of SCMH1 gene CTD PMID:28505145 Scmh1 Mouse bisphenol F multiple interactions ISO SCMH1 (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of SCMH1 mRNA CTD PMID:28628672 Scmh1 Mouse butanal decreases expression ISO SCMH1 (Homo sapiens) 6480464 butyraldehyde results in decreased expression of SCMH1 mRNA CTD PMID:26079696 Scmh1 Mouse C60 fullerene decreases expression ISO Scmh1 (Rattus norvegicus) 6480464 fullerene C60 results in decreased expression of SCMH1 mRNA CTD PMID:19167457 Scmh1 Mouse cadmium dichloride decreases expression ISO SCMH1 (Homo sapiens) 6480464 Cadmium Chloride results in decreased expression of SCMH1 mRNA CTD PMID:38568856 Scmh1 Mouse cobalt dichloride increases expression ISO Scmh1 (Rattus norvegicus) 6480464 cobaltous chloride results in increased expression of SCMH1 mRNA CTD PMID:24386269 Scmh1 Mouse copper(II) sulfate decreases expression ISO SCMH1 (Homo sapiens) 6480464 Copper Sulfate results in decreased expression of SCMH1 mRNA CTD PMID:19549813 Scmh1 Mouse cyclosporin A increases expression ISO SCMH1 (Homo sapiens) 6480464 Cyclosporine results in increased expression of SCMH1 mRNA CTD PMID:20106945 Scmh1 Mouse cyclosporin A decreases expression ISO SCMH1 (Homo sapiens) 6480464 Cyclosporine results in decreased expression of SCMH1 mRNA CTD PMID:25562108 Scmh1 Mouse dexamethasone multiple interactions ISO SCMH1 (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of SCMH1 mRNA CTD PMID:28628672 Scmh1 Mouse diuron decreases expression ISO Scmh1 (Rattus norvegicus) 6480464 Diuron results in decreased expression of SCMH1 mRNA CTD PMID:21551480 Scmh1 Mouse epoxiconazole affects expression EXP 6480464 epoxiconazole affects the expression of SCMH1 mRNA CTD PMID:35436446 Scmh1 Mouse folic acid multiple interactions EXP 6480464 Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of SCMH1 mRNA] CTD PMID:22206623 Scmh1 Mouse formaldehyde decreases expression ISO SCMH1 (Homo sapiens) 6480464 Formaldehyde results in decreased expression of SCMH1 mRNA CTD PMID:23649840 Scmh1 Mouse FR900359 increases phosphorylation ISO SCMH1 (Homo sapiens) 6480464 FR900359 results in increased phosphorylation of SCMH1 protein CTD PMID:37730182 Scmh1 Mouse genistein decreases expression EXP 6480464 Genistein results in decreased expression of SCMH1 mRNA CTD PMID:32186404 Scmh1 Mouse gentamycin decreases expression ISO Scmh1 (Rattus norvegicus) 6480464 Gentamicins results in decreased expression of SCMH1 mRNA CTD PMID:22061828 Scmh1 Mouse indometacin multiple interactions ISO SCMH1 (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of SCMH1 mRNA CTD PMID:28628672 Scmh1 Mouse methapyrilene increases methylation ISO SCMH1 (Homo sapiens) 6480464 Methapyrilene results in increased methylation of SCMH1 promoter CTD PMID:30157460 Scmh1 Mouse okadaic acid decreases expression ISO SCMH1 (Homo sapiens) 6480464 Okadaic Acid results in decreased expression of SCMH1 mRNA CTD PMID:38832940 Scmh1 Mouse paracetamol decreases expression ISO Scmh1 (Rattus norvegicus) 6480464 Acetaminophen results in decreased expression of SCMH1 mRNA CTD PMID:33387578 Scmh1 Mouse perfluorononanoic acid increases expression ISO SCMH1 (Homo sapiens) 6480464 perfluoro-n-nonanoic acid results in increased expression of SCMH1 mRNA CTD PMID:32588087 Scmh1 Mouse phenobarbital multiple interactions EXP 6480464 NR1I3 protein affects the reaction [Phenobarbital results in increased expression of SCMH1 mRNA] CTD PMID:19482888 Scmh1 Mouse phenobarbital increases expression EXP 6480464 Phenobarbital results in increased expression of SCMH1 mRNA CTD PMID:19482888 Scmh1 Mouse potassium dichromate decreases expression EXP 6480464 Potassium Dichromate results in decreased expression of SCMH1 mRNA CTD PMID:23608068 Scmh1 Mouse quercetin decreases expression ISO SCMH1 (Homo sapiens) 6480464 Quercetin results in decreased expression of SCMH1 mRNA CTD PMID:21632981 Scmh1 Mouse silver atom increases expression EXP 6480464 Silver results in increased expression of SCMH1 mRNA CTD PMID:27131904 Scmh1 Mouse silver(0) increases expression EXP 6480464 Silver results in increased expression of SCMH1 mRNA CTD PMID:27131904 Scmh1 Mouse sodium arsenate increases expression EXP 6480464 sodium arsenate results in increased expression of SCMH1 mRNA CTD PMID:21795629 Scmh1 Mouse sodium arsenite decreases expression ISO SCMH1 (Homo sapiens) 6480464 sodium arsenite results in decreased expression of SCMH1 mRNA CTD PMID:38568856 Scmh1 Mouse titanium dioxide decreases methylation EXP 6480464 titanium dioxide results in decreased methylation of SCMH1 gene CTD PMID:35295148 Scmh1 Mouse triptonide decreases expression EXP 6480464 triptonide results in decreased expression of SCMH1 mRNA CTD PMID:33045310 Scmh1 Mouse tungsten decreases expression EXP 6480464 Tungsten results in decreased expression of SCMH1 mRNA CTD PMID:30912803 Scmh1 Mouse urethane decreases expression ISO SCMH1 (Homo sapiens) 6480464 Urethane results in decreased expression of SCMH1 mRNA CTD PMID:28818685 Scmh1 Mouse valproic acid decreases methylation ISO SCMH1 (Homo sapiens) 6480464 Valproic Acid results in decreased methylation of SCMH1 gene CTD PMID:29154799 Scmh1 Mouse vinclozolin increases expression ISO Scmh1 (Rattus norvegicus) 6480464 vinclozolin results in increased expression of SCMH1 mRNA CTD PMID:23034163 Scmh1 Mouse vitamin E decreases expression ISO SCMH1 (Homo sapiens) 6480464 Vitamin E results in decreased expression of SCMH1 mRNA CTD PMID:19244175
1,2-dimethylhydrazine (EXP) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 3',5'-cyclic UMP (ISO) 3,4-methylenedioxymethamphetamine (EXP) 3-isobutyl-1-methyl-7H-xanthine (ISO) 7,12-dimethyltetraphene (EXP) acetamide (ISO) acrylamide (ISO) all-trans-retinoic acid (ISO) amphetamine (ISO) aristolochic acid A (ISO) benzo[a]pyrene (EXP,ISO) benzo[e]pyrene (ISO) bisphenol A (EXP,ISO) bisphenol F (ISO) butanal (ISO) C60 fullerene (ISO) cadmium dichloride (ISO) cobalt dichloride (ISO) copper(II) sulfate (ISO) cyclosporin A (ISO) dexamethasone (ISO) diuron (ISO) epoxiconazole (EXP) folic acid (EXP) formaldehyde (ISO) FR900359 (ISO) genistein (EXP) gentamycin (ISO) indometacin (ISO) methapyrilene (ISO) okadaic acid (ISO) paracetamol (ISO) perfluorononanoic acid (ISO) phenobarbital (EXP) potassium dichromate (EXP) quercetin (ISO) silver atom (EXP) silver(0) (EXP) sodium arsenate (EXP) sodium arsenite (ISO) titanium dioxide (EXP) triptonide (EXP) tungsten (EXP) urethane (ISO) valproic acid (ISO) vinclozolin (ISO) vitamin E (ISO)
Scmh1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 120,262,347 - 120,387,397 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 120,262,478 - 120,387,383 (+) Ensembl GRCm39 Ensembl GRCm38 4 120,405,150 - 120,530,200 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 120,405,281 - 120,530,186 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 120,077,886 - 120,202,804 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 119,903,044 - 120,027,590 (+) NCBI MGSCv36 mm8 Celera 4 119,122,290 - 119,247,186 (+) NCBI Celera Cytogenetic Map 4 D2.1 NCBI cM Map 4 56.52 NCBI
SCMH1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 41,027,202 - 41,242,306 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 41,027,202 - 41,242,306 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 41,492,874 - 41,707,978 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 41,265,461 - 41,480,375 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 41,161,969 - 41,376,881 NCBI Celera 1 39,775,792 - 39,990,782 (-) NCBI Celera Cytogenetic Map 1 p34.2 NCBI HuRef 1 39,609,958 - 39,825,006 (-) NCBI HuRef CHM1_1 1 41,608,779 - 41,823,761 (-) NCBI CHM1_1 T2T-CHM13v2.0 1 40,896,567 - 41,111,749 (-) NCBI T2T-CHM13v2.0
Scmh1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 139,276,352 - 139,401,118 (+) NCBI GRCr8 mRatBN7.2 5 133,991,167 - 134,115,893 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 133,990,520 - 134,122,105 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 136,757,225 - 136,843,663 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 138,513,679 - 138,600,119 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 138,534,308 - 138,620,740 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 139,379,256 - 139,466,805 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 139,385,429 - 139,466,081 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 143,162,751 - 143,249,837 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 141,039,645 - 141,127,334 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 141,006,241 - 141,132,777 (+) NCBI Celera 5 132,585,181 - 132,671,540 (+) NCBI Celera Cytogenetic Map 5 q36 NCBI
Scmh1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955537 824,828 - 937,324 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955537 819,209 - 971,297 (-) NCBI ChiLan1.0 ChiLan1.0
SCMH1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 185,571,699 - 185,788,728 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 184,713,709 - 184,930,344 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 40,323,101 - 40,540,236 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 41,639,127 - 41,809,094 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 41,639,127 - 41,776,261 (-) Ensembl panpan1.1 panPan2
SCMH1 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 15 1,917,503 - 2,056,325 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 15 1,917,509 - 2,058,904 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 15 2,138,061 - 2,315,655 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 15 1,969,172 - 2,146,826 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 15 1,969,227 - 2,146,822 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 15 1,874,915 - 2,052,478 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 15 1,934,876 - 2,112,665 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 15 1,950,439 - 2,128,033 (+) NCBI UU_Cfam_GSD_1.0
Scmh1 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405058 56,818,076 - 56,959,576 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936474 22,647,334 - 22,774,405 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936474 22,648,156 - 22,784,399 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
SCMH1 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 6 169,999,792 - 170,189,353 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 6 169,999,763 - 170,189,357 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 6 157,208,869 - 157,236,957 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
SCMH1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 91,724,068 - 91,890,131 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 91,751,977 - 91,889,164 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666033 24,991,230 - 25,217,051 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Scmh1
.
Predicted Target Of
Count of predictions: 2373 Count of miRNA genes: 620 Interacting mature miRNAs: 767 Transcripts: ENSMUST00000000087, ENSMUST00000064991, ENSMUST00000106298, ENSMUST00000106301, ENSMUST00000122860, ENSMUST00000132116, ENSMUST00000133169, ENSMUST00000133290, ENSMUST00000134375, ENSMUST00000136801, ENSMUST00000144555, ENSMUST00000144862, ENSMUST00000151345, ENSMUST00000153099 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
11532714 Sluc43_m susceptibility to lung cancer 43 (mouse) 4 46642108 123127211 Mouse 10047132 Albq19_m albuminuria QTL 19 (mouse) Not determined 4 112824389 146824389 Mouse 12904002 Opfaq9_m open field activity QTL 9 (mouse) 4 92975790 126975790 Mouse 14746982 Manh56_m mandible shape 56 (mouse) 4 117815917 151815917 Mouse 4141623 W6q13_m weight 6 weeks QTL 13 (mouse) Not determined 88982069 140468203 Mouse 12910797 Pwgrq4_m pre-weaning growth rate QTL 4 (mouse) 4 105835310 141433838 Mouse 25314312 Syncl2_m synaptonemal complex length 2 (mouse) 4 65718237 146584457 Mouse 12910794 Pwbwq8_m post-weaning body weight QTL 8 (mouse) 4 105835310 141433838 Mouse 14696689 Gdq2_m grooming duration QTL 2, females (mouse) 4 100857197 124893793 Mouse 1300743 Skull6_m skull morphology 6 (mouse) Not determined 4 111009051 145009280 Mouse 1301382 Arvm2_m autoimmune renal vasculitis 2 (mouse) Not determined 4 107791564 141791756 Mouse 12910813 Pwbwq4_m pre-weaning body weight QTL 4 (mouse) 4 105835310 141433838 Mouse 4141093 W3q17_m weight 3 weeks QTL 17 (mouse) Not determined 88982069 140468203 Mouse 12910808 Pwbwq9_m post-weaning body weight QTL 9 (mouse) 4 105835310 141433838 Mouse 11567249 Elorr3_m ethanol induced loss of righting response 3 (mouse) 4 3722677 156268235 Mouse 4142493 Femwf13_m femur work to failure 13 (mouse) Not determined 116154678 150154782 Mouse 1301815 Sles2_m systemic lupus erythmatosus suppressor 2 (mouse) Not determined 4 94957579 150676858 Mouse 1300663 Start2_m startle response 2 (mouse) Not determined 4 107264957 141265153 Mouse 1300918 Stheal4_m soft tissue heal 4 (mouse) Not determined 4 89969627 123969747 Mouse 1301823 Bmd7_m bone mineral density 7 (mouse) Not determined 4 88982069 151654550 Mouse 4141330 Iva1_m isovaleric acid smelling 1 (mouse) Not determined 117071971 120723203 Mouse 1302078 Sluc21_m susceptibility to lung cancer 21 (mouse) Not determined 4 117401141 151401275 Mouse 10412072 Ssen1_m suseptibility to Sendai virus 1 (mouse) Not determined 4 109658132 133154782 Mouse 13208562 Wght7_m weight 7 (mouse) 4 90888237 148084457 Mouse 13208565 Bmiq6_m body mass index QTL 6 (mouse) 4 110857197 125893793 Mouse 1300655 Nidds_m non-insulin-dependent diabetes mellitus in SJL (mouse) Not determined 4 115030777 129465915 Mouse 1300781 Lith8_m lithogenic gene 8 (mouse) Not determined 4 107264957 141265153 Mouse 39128212 Lwq21_m liver weight QTL 21 (mouse) 4 88982069 140468203 Mouse 1300689 Dob1_m Dietary obesity 1 (mouse) Body weight 4 101574601 123127211 Mouse 1301847 Fecq2_m fecundity QTL 2 (mouse) Not determined 4 100071971 134072206 Mouse 1302102 Bis1_m beta-carboline-induced seizures 1 (mouse) Not determined 4 119864433 153864536 Mouse 26884445 Sklq7_m skull length QTL 7, 10 week (mouse) 4 68018237 150884457 Mouse 1301597 Anxty_m anxiety (mouse) Not determined 4 74137574 128009280 Mouse 26884437 Sklq13_m skull length QTL 13, 16 week (mouse) 4 57700000 155684457 Mouse 4141549 W10q10_m weight 10 weeks QTL 10 (mouse) Not determined 88982069 140468203 Mouse 1357895 Ctrcts_m cataract severity (mouse) Not determined 4 45709925 138342753 Mouse 1300809 Ccrs2_m corpus callosum hemisphere surface size 2 (mouse) Not determined 4 107264957 141265153 Mouse 1301964 Bw8q2_m body weight at 8 weeks QTL 2 (mouse) Not determined 4 119864433 153864536 Mouse 1301106 Skts7_m skin tumor susceptibility 7 (mouse) Not determined 4 100071971 134072206 Mouse 1301233 Sbw2_m splenomegaly-NZB x NZW 2 (mouse) Not determined 4 94957579 128009280 Mouse 10755520 Rbc1_m red blood cell count 1 (mouse) 4 108477692 142477692 Mouse 10755521 Hct1_m hematocrit 1 (mouse) 4 108477692 142477692 Mouse 10755522 Hgb1_m hemoglobin 1 (mouse) 4 108477692 142477692 Mouse 27095924 Pglq2_m pelvic girdle length QTL 2, 5 week (mouse) 4 69118237 130727311 Mouse 15039368 Nmrs19_m NAFLD-associated magnetic resonance shift 19 (mouse) 4 90882780 124882780 Mouse 27095917 Scvln14_m sacral vertebrae length 2, 16 week (mouse) 4 68018237 130277062 Mouse 1301731 Cafq2_m caffeine metabolism QTL 2 (mouse) Not determined 4 94732255 128732454 Mouse 4141900 Skts-fp1_m skin tumor susceptibility in FVB and PWK 1 (mouse) Not determined 4 53550839 124055180 Mouse 15039382 Ltgq7_m liver triglyceride QTL 7 (mouse) 4 105705794 139705794 Mouse 15039377 Bw45_m body weight QTL 45 (mouse) 4 105705794 139705794 Mouse 1300839 Dyscalc2_m dystrophic cardiac calcinosis 2 (mouse) Not determined 4 111009051 145009280 Mouse 12880433 Fgf23lq1_m FGF23 serum level QTL 1 (mouse) 4 101157197 135157197 Mouse 4141001 Tgq17_m triglyceride QTL 17 (mouse) Not determined 112523489 146523489 Mouse 1300580 Lbw2_m lupus NZB x NZW 2 (mouse) Not determined 4 98545539 128009280 Mouse 15039378 Adip30_m adiposity 30 (mouse) 4 105705794 139705794 Mouse 26884449 Sklq2_m skull length QTL 2, 5 week (mouse) 4 36700000 128993793 Mouse 27095905 Scvln3_m sacral vertebrae length 2, 5 week (mouse) 4 55600000 128993793 Mouse 1357800 Tgq3_m triglyceride QTL 3 (mouse) Not determined 4 107055093 141055180 Mouse 15039385 Mvlq3_m macrovesicular liver lesion QTL 3 (mouse) 4 112182386 146182386 Mouse 12903992 Opfaq6_m open field activity QTL 6 (mouse) 4 119064995 121366497 Mouse 11553870 Cmmm_m carcinoma modifier of MSM (mouse) 4 90590668 124590781 Mouse 1301996 Mmtg2_m modifier of mammary tumor growth 2 (mouse) Not determined 4 116270979 124055180 Mouse
AI851618
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 4 120,529,757 - 120,529,897 UniSTS GRCm38 MGSCv37 4 120,202,362 - 120,202,502 UniSTS GRCm37 Celera 4 119,246,744 - 119,246,884 UniSTS Cytogenetic Map 4 D1-D2 UniSTS Whitehead/MRC_RH 4 1579.53 UniSTS
AI315320
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 4 120,529,706 - 120,530,105 UniSTS GRCm38 MGSCv37 4 120,202,311 - 120,202,710 UniSTS GRCm37 Celera 4 119,246,693 - 119,247,092 UniSTS Cytogenetic Map 4 D1-D2 UniSTS Whitehead/MRC_RH 4 1581.71 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSMUST00000000087 ⟹ ENSMUSP00000000087
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,262,504 - 120,387,381 (+) Ensembl GRCm38.p6 Ensembl 4 120,405,307 - 120,530,184 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000064991 ⟹ ENSMUSP00000069813
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,310,440 - 120,387,359 (+) Ensembl GRCm38.p6 Ensembl 4 120,453,243 - 120,530,162 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000106298 ⟹ ENSMUSP00000101905
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,319,277 - 120,386,456 (+) Ensembl GRCm38.p6 Ensembl 4 120,462,080 - 120,529,259 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000106301 ⟹ ENSMUSP00000101908
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,304,344 - 120,387,381 (+) Ensembl GRCm38.p6 Ensembl 4 120,447,147 - 120,530,184 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000122860 ⟹ ENSMUSP00000120950
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,362,602 - 120,379,753 (+) Ensembl GRCm38.p6 Ensembl 4 120,505,405 - 120,522,556 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000132116 ⟹ ENSMUSP00000115343
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,262,625 - 120,320,281 (+) Ensembl GRCm38.p6 Ensembl 4 120,405,428 - 120,463,084 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000133169
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,386,352 - 120,387,383 (+) Ensembl GRCm38.p6 Ensembl 4 120,529,155 - 120,530,186 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000133290
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,385,026 - 120,386,417 (+) Ensembl GRCm38.p6 Ensembl 4 120,527,829 - 120,529,220 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000134375
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,262,478 - 120,311,712 (+) Ensembl GRCm38.p6 Ensembl 4 120,405,281 - 120,454,515 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000136801
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,374,823 - 120,387,381 (+) Ensembl GRCm38.p6 Ensembl 4 120,517,626 - 120,530,184 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000144555
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,361,076 - 120,387,381 (+) Ensembl GRCm38.p6 Ensembl 4 120,503,879 - 120,530,184 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000144862
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,374,876 - 120,386,998 (+) Ensembl GRCm38.p6 Ensembl 4 120,517,679 - 120,529,801 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000151345
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,262,563 - 120,320,316 (+) Ensembl GRCm38.p6 Ensembl 4 120,405,366 - 120,463,119 (+) Ensembl
Ensembl Acc Id:
ENSMUST00000153099
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 4 120,262,578 - 120,305,929 (+) Ensembl GRCm38.p6 Ensembl 4 120,405,381 - 120,448,732 (+) Ensembl
RefSeq Acc Id:
NM_001159630 ⟹ NP_001153102
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,545 - 120,387,397 (+) NCBI GRCm38 4 120,405,281 - 120,530,199 (+) ENTREZGENE MGSCv37 4 120,077,886 - 120,202,804 (+) RGD Celera 4 119,122,290 - 119,247,186 (+) RGD cM Map 4 ENTREZGENE
Sequence:
GCCGCCGCCGCCGCCGCCTCGGTGGAGCCCCCCGCCTCCCGCCGCCGCCTCAGCCGAGCCGCTCTCCAGAGCCGTCGCCCGCCCCTGCCGGCGTCCTCGCTCGCTCCCTGCGCAGCGGAAACATGGCG
hide sequence
RefSeq Acc Id:
NM_001379184 ⟹ NP_001366113
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,545 - 120,387,397 (+) NCBI GRCm38 4 120,405,348 - 120,530,200 (+) NCBI
Sequence:
AGAGCCGTCGCCCGCCCCTGCCGGCGTCCTCGCTCGCTCCCTGCGCAGCGGAAACATGGCGGCTGGATGGGAGTGAGCCGCCCGCGCCCCGCGCCGCTGTCGCCCTCAGATGGAGAGATTAAATCACA
hide sequence
RefSeq Acc Id:
NM_001379185 ⟹ NP_001366114
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,545 - 120,387,397 (+) NCBI GRCm38 4 120,405,348 - 120,530,200 (+) NCBI
Sequence:
AGAGCCGTCGCCCGCCCCTGCCGGCGTCCTCGCTCGCTCCCTGCGCAGCGGAAACATGGCGGCTGGATGGGAGTGAGCCGCCCGCGCCCCGCGCCGCTGTCGCCCTCAGATGGAGAGATTAAATCACA
hide sequence
RefSeq Acc Id:
NM_001379186 ⟹ NP_001366115
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,545 - 120,387,397 (+) NCBI GRCm38 4 120,405,348 - 120,530,200 (+) NCBI
Sequence:
AGAGCCGTCGCCCGCCCCTGCCGGCGTCCTCGCTCGCTCCCTGCGCAGCGGAAACATGGCGGCTGGATGGGAGTGAGCCGCCCGCGCCCCGCGCCGCTGTCGCCCTCAGATGGAGAGATTAAATCACA
hide sequence
RefSeq Acc Id:
NM_001404090 ⟹ NP_001391019
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,545 - 120,387,397 (+) NCBI
RefSeq Acc Id:
NM_001404102 ⟹ NP_001391031
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,545 - 120,387,397 (+) NCBI
RefSeq Acc Id:
NM_001404103 ⟹ NP_001391032
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,545 - 120,387,397 (+) NCBI
RefSeq Acc Id:
NM_013883 ⟹ NP_038911
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,545 - 120,387,397 (+) NCBI GRCm38 4 120,405,281 - 120,530,199 (+) ENTREZGENE MGSCv37 4 120,077,886 - 120,202,804 (+) RGD Celera 4 119,122,290 - 119,247,186 (+) RGD cM Map 4 ENTREZGENE
Sequence:
GCCGCCGCCGCCGCCGCCTCGGTGGAGCCCCCCGCCTCCCGCCGCCGCCTCAGCCGAGCCGCTCTCCAGAGCCGTCGCCCGCCCCTGCCGGCGTCCTCGCTCGCTCCCTGCGCAGCGGAAACATGGCG
hide sequence
RefSeq Acc Id:
NR_175812
RefSeq Status:
VALIDATED
Type:
NON-CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,545 - 120,387,397 (+) NCBI
RefSeq Acc Id:
XM_006503149 ⟹ XP_006503212
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,347 - 120,387,384 (+) NCBI GRCm38 4 120,405,150 - 120,530,187 (+) NCBI
Sequence:
CCCTTCCCGCCGCCCCGCGCGCGCGCGCGAGAGAACCCAACGGCCGCGGCGCGCGCCACCTCGCGGCAGGAGTCTCTGGCGGGCGGGGCTGGGCAGCTCTCGCCCCCGCCCCCCGCCCCTCGGCCGCC
hide sequence
RefSeq Acc Id:
XM_017320253 ⟹ XP_017175742
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,313,731 - 120,387,384 (+) NCBI GRCm38 4 120,456,533 - 120,530,187 (+) NCBI
Sequence:
TTACCTTGTCTAATGTTAATGGATTGTTTCTTCCGTTGATTCACACGTGACATACTTTCAGATCTCTAACACAAAGTCACCATTTTTATTCTTGTGTACTATCTTTTTCTCTCTGAGTCAGGCCAAAC
hide sequence
RefSeq Acc Id:
XR_003954960
Type:
NON-CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,377 - 120,382,206 (+) NCBI GRCm38 4 120,405,180 - 120,530,187 (+) NCBI
Sequence:
GAGAACCCAACGGCCGCGGCGCGCGCCACCTCGCGGCAGGAGTCTCTGGCGGGCGGGGCTGGGC
hide sequence
RefSeq Acc Id:
XR_004941919
Type:
NON-CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 4 120,262,347 - 120,382,206 (+) NCBI
Sequence:
CCCTTCCCGCCGCCCCGCGCGCGCGCGCGAGAGAACCCAACGGCCGCGGCGCGCGCCACCTCGC
hide sequence
RefSeq Acc Id:
NP_038911 ⟸ NM_013883
- Peptide Label:
isoform 1
- UniProtKB:
Q8K214 (UniProtKB/Swiss-Prot)
- Sequence:
MLVCYSVLACESLWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSSEIQPIGNCEKNGGMLQPPLG
hide sequence
RefSeq Acc Id:
NP_001153102 ⟸ NM_001159630
- Peptide Label:
isoform 2
- UniProtKB:
B1AS51 (UniProtKB/Swiss-Prot), Q9JME0 (UniProtKB/Swiss-Prot), Q8K214 (UniProtKB/Swiss-Prot)
- Sequence:
MLVCYSVLACESLWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKISMKL
hide sequence
RefSeq Acc Id:
XP_006503212 ⟸ XM_006503149
- Peptide Label:
isoform X3
- Sequence:
MQPSDWNDVKKPKYGHLSESASQYQESVDILELGHFTWDKYLKETCSVPAPVHCFKQSYTPPSN
hide sequence
RefSeq Acc Id:
XP_017175742 ⟸ XM_017320253
- Peptide Label:
isoform X1
- UniProtKB:
Q8K214 (UniProtKB/Swiss-Prot)
- Sequence:
MLVCYSVLACESLWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKISMKL
hide sequence
RefSeq Acc Id:
NP_001366114 ⟸ NM_001379185
- Peptide Label:
isoform 1
RefSeq Acc Id:
NP_001366115 ⟸ NM_001379186
- Peptide Label:
isoform 3
RefSeq Acc Id:
NP_001366113 ⟸ NM_001379184
- Peptide Label:
isoform 4
Ensembl Acc Id:
ENSMUSP00000115343 ⟸ ENSMUST00000132116
Ensembl Acc Id:
ENSMUSP00000000087 ⟸ ENSMUST00000000087
Ensembl Acc Id:
ENSMUSP00000101905 ⟸ ENSMUST00000106298
Ensembl Acc Id:
ENSMUSP00000101908 ⟸ ENSMUST00000106301
Ensembl Acc Id:
ENSMUSP00000069813 ⟸ ENSMUST00000064991
Ensembl Acc Id:
ENSMUSP00000120950 ⟸ ENSMUST00000122860
RefSeq Acc Id:
NP_001391019 ⟸ NM_001404090
- Peptide Label:
isoform 2
- UniProtKB:
Q8K214 (UniProtKB/Swiss-Prot), B1AS51 (UniProtKB/Swiss-Prot), Q9JME0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id:
NP_001391031 ⟸ NM_001404102
- Peptide Label:
isoform 5
RefSeq Acc Id:
NP_001391032 ⟸ NM_001404103
- Peptide Label:
isoform 6
RGD ID: 6836349 Promoter ID: MM_KWN:39397 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Lung, MEF_B4, MEF_B6 Transcripts: OTTMUST00000020046, OTTMUST00000020048 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 4 120,189,466 - 120,190,267 (+) MPROMDB
RGD ID: 6836352 Promoter ID: MM_KWN:39398 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Brain, Lung Transcripts: OTTMUST00000020054 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 4 120,200,599 - 120,201,099 (+) MPROMDB
RGD ID: 6884478 Promoter ID: EPDNEW_M5690 Type: initiation region Name: Scmh1_1 Description: Mus musculus sex comb on midleg homolog 1 , transcript variant4, mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Alternative Promoters: null; see alsoEPDNEW_M5691 EPDNEW_M5692 Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 4 120,405,379 - 120,405,439 EPDNEW
RGD ID: 6884480 Promoter ID: EPDNEW_M5691 Type: single initiation site Name: Scmh1_2 Description: Mus musculus sex comb on midleg homolog 1 , transcript variant4, mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Alternative Promoters: null; see alsoEPDNEW_M5690 EPDNEW_M5692 Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 4 120,450,005 - 120,450,065 EPDNEW
RGD ID: 6884482 Promoter ID: EPDNEW_M5692 Type: initiation region Name: Scmh1_3 Description: Mus musculus sex comb on midleg homolog 1 , transcript variant4, mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Alternative Promoters: null; see alsoEPDNEW_M5690 EPDNEW_M5691 Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 4 120,517,603 - 120,517,663 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2024-12-17
Scmh1
Scm polycomb group homolog 1
Scmh1
sex comb on midleg homolog 1
Symbol and/or name change
5135510 APPROVED
