Suclg2 (succinate-Coenzyme A ligase, GDP-forming, beta subunit) - Rat Genome Database
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Gene: Suclg2 (succinate-Coenzyme A ligase, GDP-forming, beta subunit) Mus musculus
Analyze
Symbol: Suclg2
Name: succinate-Coenzyme A ligase, GDP-forming, beta subunit
RGD ID: 1312780
MGI Page MGI
Description: Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Orthologous to human SUCLG2 (succinate-CoA ligase GDP-forming subunit beta); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxyphenyl retinamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AF171077; AW556404; D6Wsu120; D6Wsu120e; G-SCS; GTP-specific succinyl-CoA synthetase beta subunit; GTP-specific succinyl-CoA synthetase subunit beta; GTPSCS; MGC91183; SCS-betaG; succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial; succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial; succinyl-CoA synthetase beta-G chain
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm15163   Gm19102  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39695,449,990 - 95,695,850 (-)NCBIGRCm39mm39
GRCm39 Ensembl695,449,990 - 95,695,781 (-)Ensembl
GRCm38695,473,009 - 95,718,858 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl695,473,009 - 95,718,800 (-)EnsemblGRCm38mm10GRCm38
MGSCv37695,424,128 - 95,668,831 (-)NCBIGRCm37mm9NCBIm37
MGSCv36695,439,609 - 95,684,251 (-)NCBImm8
Celera697,363,804 - 97,602,843 (-)NCBICelera
Cytogenetic Map6D2NCBI
cM Map644.63NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(R)-adrenaline  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-methyl-4-oxido-2-pyrazin-4-iumcarboxylic acid  (ISO)
7H-xanthine  (ISO)
9H-xanthine  (ISO)
acetamide  (ISO)
acrolein  (ISO)
aflatoxin B1  (EXP,ISO)
alpha-hexachlorocyclohexane  (ISO)
alpha-pinene  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (EXP)
cadmium dichloride  (ISO)
choline  (EXP)
chromium trinitrate  (EXP)
cisplatin  (EXP)
clofibrate  (ISO)
clofibric acid  (ISO)
cobalt dichloride  (ISO)
crocidolite asbestos  (EXP)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP,ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
fumonisin B1  (EXP)
gentamycin  (ISO)
glyphosate  (ISO)
L-ascorbic acid  (EXP)
L-methionine  (EXP)
methapyrilene  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
microcystin-LR  (EXP)
N-nitrosodiethylamine  (ISO)
N-nitrosomorpholine  (ISO)
okadaic acid  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
perfluorododecanoic acid  (ISO)
phenethyl isothiocyanate  (ISO)
phenylmercury acetate  (ISO)
phlorizin  (EXP)
pirinixic acid  (EXP)
potassium chromate  (EXP)
quercetin  (ISO)
resveratrol  (EXP)
SB 431542  (ISO)
sodium nitrate  (EXP)
sunitinib  (ISO)
Tesaglitazar  (ISO)
tetrachloromethane  (EXP,ISO)
titanium dioxide  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:9765291   PMID:10349636   PMID:10512203   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11812828   PMID:12477932   PMID:12520002   PMID:12904583  
PMID:14610273   PMID:14681479   PMID:15489334   PMID:15782199   PMID:15840001   PMID:16141072   PMID:16141073   PMID:17626619   PMID:18614015   PMID:18799693   PMID:21267068   PMID:21873635  
PMID:22496890   PMID:25027320   PMID:26697723   PMID:27215380   PMID:27496549   PMID:27746211   PMID:28245920   PMID:28378742   PMID:30457570   PMID:30498063   PMID:30951662   PMID:31097699  
PMID:31138677   PMID:32325033  


Genomics

Comparative Map Data
Suclg2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39695,449,990 - 95,695,850 (-)NCBIGRCm39mm39
GRCm39 Ensembl695,449,990 - 95,695,781 (-)Ensembl
GRCm38695,473,009 - 95,718,858 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl695,473,009 - 95,718,800 (-)EnsemblGRCm38mm10GRCm38
MGSCv37695,424,128 - 95,668,831 (-)NCBIGRCm37mm9NCBIm37
MGSCv36695,439,609 - 95,684,251 (-)NCBImm8
Celera697,363,804 - 97,602,843 (-)NCBICelera
Cytogenetic Map6D2NCBI
cM Map644.63NCBI
SUCLG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl367,360,460 - 67,654,614 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl367,360,460 - 67,654,612 (-)EnsemblGRCh38hg38GRCh38
GRCh38367,360,460 - 67,654,612 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37367,410,884 - 67,705,036 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36367,507,833 - 67,787,728 (-)NCBINCBI36hg18NCBI36
Build 34367,507,835 - 67,787,698NCBI
Celera367,353,993 - 67,645,444 (-)NCBI
Cytogenetic Map3p14.1NCBI
HuRef367,427,311 - 67,718,351 (-)NCBIHuRef
CHM1_1367,362,353 - 67,656,266 (-)NCBICHM1_1
Suclg2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24128,067,031 - 128,337,146 (-)NCBI
Rnor_6.0 Ensembl4127,552,101 - 127,824,970 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04127,552,100 - 127,824,970 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04192,061,200 - 192,333,899 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44129,995,856 - 130,276,182 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14130,240,697 - 130,521,016 (-)NCBI
Celera4116,961,947 - 117,231,527 (-)NCBICelera
Cytogenetic Map4q34NCBI
Suclg2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542120,089,237 - 20,350,843 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542120,089,471 - 20,350,334 (+)NCBIChiLan1.0ChiLan1.0
SUCLG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1368,646,711 - 68,931,961 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0367,277,348 - 67,563,181 (-)NCBIMhudiblu_PPA_v0panPan3
SUCLG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2023,895,802 - 24,182,869 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12023,915,149 - 24,167,740 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Suclg2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936603243,113 - 378,526 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SUCLG2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1348,564,073 - 49,090,468 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11348,650,851 - 49,090,521 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21353,872,520 - 54,030,696 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SUCLG2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12228,382,612 - 28,677,749 (-)NCBI
ChlSab1.1 Ensembl2228,381,787 - 28,677,742 (-)Ensembl
Suclg2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247731,816,924 - 2,087,384 (-)NCBI

Position Markers
AW556404  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38695,473,064 - 95,473,163UniSTSGRCm38
MGSCv37695,423,058 - 95,423,157UniSTSGRCm37
Celera697,362,734 - 97,362,833UniSTS
Cytogenetic Map6D3UniSTS
cM Map641.0UniSTS
Whitehead/MRC_RH6980.23UniSTS
RH124559  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38695,474,264 - 95,474,491UniSTSGRCm38
GRCm38X157,015,446 - 157,015,673UniSTSGRCm38
MGSCv37695,424,258 - 95,424,485UniSTSGRCm37
MGSCv37X153,449,989 - 153,450,216UniSTSGRCm37
CeleraX140,275,602 - 140,275,829UniSTS
Celera697,363,934 - 97,364,161UniSTS
Cytogenetic Map6D3UniSTS
Cytogenetic MapXF4UniSTS
cM Map641.0UniSTS
Suclg2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X157,015,622 - 157,016,583UniSTSGRCm38
MGSCv37X153,450,165 - 153,451,126UniSTSGRCm37
CeleraX140,275,778 - 140,276,739UniSTS
Cytogenetic MapXF4UniSTS
Cytogenetic Map6D3UniSTS
cM Map641.0UniSTS
UniSTS:235506  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38695,561,725 - 95,562,065UniSTSGRCm38
MGSCv37695,511,719 - 95,512,059UniSTSGRCm37
Celera697,452,495 - 97,452,835UniSTS
Cytogenetic Map6D3UniSTS
cM Map641.0UniSTS
D6Wsu120e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38695,474,239 - 95,474,488UniSTSGRCm38
GRCm38X157,015,421 - 157,015,670UniSTSGRCm38
MGSCv37X153,449,964 - 153,450,213UniSTSGRCm37
MGSCv37695,424,233 - 95,424,482UniSTSGRCm37
CeleraX140,275,577 - 140,275,826UniSTS
Celera697,363,909 - 97,364,158UniSTS
Cytogenetic Map6D3UniSTS
Cytogenetic MapXF4UniSTS
cM Map641.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
11532719Sluc45_msusceptibility to lung cancer 45 (mouse)69260730698258933Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92607306112004738Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:333
Count of miRNA genes:260
Interacting mature miRNAs:292
Transcripts:ENSMUST00000079847
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001326558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC121612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC125225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC135018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF058956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF171077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI482427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC043312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC080781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI985474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU234009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000079847   ⟹   ENSMUSP00000078774
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl695,474,142 - 95,692,882 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203071
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl695,566,485 - 95,644,009 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203109
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl695,654,751 - 95,718,800 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204224   ⟹   ENSMUSP00000144827
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl695,473,009 - 95,718,800 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204567   ⟹   ENSMUSP00000145471
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl695,594,683 - 95,657,468 (-)Ensembl
RefSeq Acc Id: NM_001326558   ⟹   NP_001313487
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39695,449,990 - 95,669,863 (-)NCBI
GRCm38695,473,009 - 95,692,882 (-)NCBI
Sequence:
RefSeq Acc Id: NM_011507   ⟹   NP_035637
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39695,449,990 - 95,695,827 (-)NCBI
GRCm38695,473,009 - 95,718,846 (-)NCBI
MGSCv37695,424,128 - 95,668,831 (-)RGD
Celera697,362,679 - 97,602,851 (-)NCBI
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030255295   ⟹   XP_030111155
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39695,451,127 - 95,695,802 (-)NCBI
GRCm38695,474,146 - 95,718,821 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003956174
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39695,451,127 - 95,695,850 (-)NCBI
GRCm38695,474,146 - 95,718,858 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_035637   ⟸   NM_011507
- Peptide Label: isoform 1 precursor
- UniProtKB: Q9Z2I8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001313487   ⟸   NM_001326558
- Peptide Label: isoform 2
- UniProtKB: Q9Z2I8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030111155   ⟸   XM_030255295
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000144827   ⟸   ENSMUST00000204224
RefSeq Acc Id: ENSMUSP00000078774   ⟸   ENSMUST00000079847
RefSeq Acc Id: ENSMUSP00000145471   ⟸   ENSMUST00000204567
Protein Domains
ATP-grasp   ATP-grasp_2

Promoters
RGD ID:6840037
Promoter ID:MM_KWN:46988
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Liver,   Lung,   MEF_B6
Transcripts:NM_011507,   UC009DAC.1,   UC009DAD.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36695,668,326 - 95,668,826 (-)MPROMDB
RGD ID:6890504
Promoter ID:EPDNEW_M8703
Type:multiple initiation site
Name:Suclg2_1
Description:Mus musculus succinate-Coenzyme A ligase, GDP-forming, beta subunit, transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38695,718,789 - 95,718,849EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1306824 AgrOrtholog
Ensembl Genes ENSMUSG00000061838 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000078774 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000144827 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000145471 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000079847 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000204224 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000204567 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1490.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.261 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ATP-grasp UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATP-grasp_succ-CoA_synth-type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATP_grasp_subdomain_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CoA_ligase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Succ-CoA_synthase_bsu_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Succ_CoA_betaG_euk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Succ_CoA_synthase_bsu UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Succinyl-CoA_synth-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20917 UniProtKB/Swiss-Prot
MGD MGI:1306824 ENTREZGENE
NCBI Gene 20917 ENTREZGENE
PANTHER PTHR11815 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ATP-grasp_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ligase_CoA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Suclg2 PhenoGen
PIRSF SucCS_beta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ATP_GRASP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SUCCINYL_COA_LIG_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52210 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs sucCoAbeta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SWD1_MOUSE UniProtKB/TrEMBL
  C6EQH3_MOUSE UniProtKB/TrEMBL
  Q9Z2I8 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3T9B8 UniProtKB/Swiss-Prot
  Q3TJQ5 UniProtKB/Swiss-Prot
  Q3TK63 UniProtKB/Swiss-Prot
  Q66JT3 UniProtKB/Swiss-Prot
  Q7TMY3 UniProtKB/Swiss-Prot
  Q80VV1 UniProtKB/Swiss-Prot
  Q8K2K9 UniProtKB/Swiss-Prot