Inava (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 13 | 50,218,149 - 50,238,430 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 13 | 47,666,446 - 47,687,383 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 13 | 47,666,447 - 47,686,729 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 13 | 50,274,546 - 50,294,825 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 13 | 51,562,632 - 51,582,913 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 13 | 48,829,671 - 48,849,950 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 13 | 53,088,438 - 53,108,713 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 13 | 53,088,439 - 53,108,713 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 13 | 58,140,416 - 58,160,691 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 13 | 49,249,247 - 49,269,528 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 13 | 49,264,092 - 49,283,433 (-) | NCBI | | | | | Celera | 13 | 47,978,818 - 47,999,085 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | q13 | NCBI | | | | |
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INAVA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 200,891,531 - 200,915,742 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 200,891,048 - 200,915,742 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 200,860,659 - 200,884,870 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 199,127,292 - 199,151,486 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 1 | 173,984,710 - 174,008,910 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q32.1 | NCBI | | | | | HuRef | 1 | 172,027,619 - 172,051,677 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 202,283,317 - 202,307,556 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 200,148,514 - 200,172,675 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Inava (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 136,141,259 - 136,162,045 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 136,141,269 - 136,162,002 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 136,213,522 - 136,234,293 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 136,213,531 - 136,234,264 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 138,110,108 - 138,130,841 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 138,029,942 - 138,050,675 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 138,849,317 - 138,870,045 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | E4 | NCBI | | | | | cM Map | 1 | 59.61 | NCBI | | | | |
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Inava (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955406 | 37,086,302 - 37,107,221 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955406 | 37,086,302 - 37,107,221 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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INAVA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 48,464,511 - 48,489,140 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 48,428,147 - 48,452,736 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 176,491,264 - 176,514,719 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 180,794,226 - 180,818,853 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 180,794,646 - 180,818,853 (+) | Ensembl | panpan1.1 | | panPan2 | |
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INAVA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 7 | 2,264,120 - 2,284,196 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 7 | 1,948,513 - 1,965,102 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 7 | 1,910,825 - 1,927,469 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 7 | 1,910,823 - 1,930,938 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 7 | 1,894,081 - 1,910,717 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 7 | 1,996,706 - 2,013,264 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 7 | 2,026,588 - 2,043,253 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Inava (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024409344 | 74,208,367 - 74,230,260 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936567 | 3,443,042 - 3,464,506 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936567 | 3,443,053 - 3,458,184 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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INAVA (Sus scrofa - pig) |
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INAVA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 25 | 28,488,990 - 28,513,997 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 25 | 28,488,901 - 28,509,704 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666055 | 29,288,593 - 29,313,048 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Inava (Heterocephalus glaber - naked mole-rat) |
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