Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Rpgrip1 (RPGR interacting protein 1) Rattus norvegicus
Symbol: Rpgrip1
Name: RPGR interacting protein 1
RGD ID: 1310807
Description: Predicted to be involved in detection of light stimulus involved in visual perception; eye development; and neural precursor cell proliferation. Localizes to ciliary rootlet and ciliary transition zone. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 6; Leber hereditary optic neuropathy; cone-rod dystrophy 13; and retinitis pigmentosa. Orthologous to human RPGRIP1 (RPGR interacting protein 1); INTERACTS WITH amphetamine; bisphenol A; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC305850; MGC114442; retinitis pigmentosa GTPase regulator interacting protein 1; X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
Homo sapiens (human) : RPGRIP1 (RPGR interacting protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Rpgrip1 (retinitis pigmentosa GTPase regulator interacting protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rpgrip1 (RPGR interacting protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RPGRIP1 (RPGR interacting protein 1)
Canis lupus familiaris (dog) : RPGRIP1 (RPGR interacting protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rpgrip1 (RPGR interacting protein 1)
Sus scrofa (pig) : RPGRIP1 (RPGR interacting protein 1)
Chlorocebus sabaeus (African green monkey) : RPGRIP1 (RPGR interacting protein 1)
Heterocephalus glaber (naked mole-rat) : Rpgrip1 (RPGR interacting protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01528,521,287 - 28,575,046 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1528,522,737 - 28,574,737 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01532,331,555 - 32,385,312 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41527,574,762 - 27,582,641 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11527,590,461 - 27,594,562 (+)NCBI
Celera1525,116,975 - 25,171,719 (+)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Rpgrip1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310807
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.