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Gene: Tgs1 (trimethylguanosine synthase 1) Rattus norvegicus
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Symbol: Tgs1
Name: trimethylguanosine synthase 1
RGD ID: 1309953
Description: Predicted to have RNA trimethylguanosine synthase activity. Predicted to be involved in 7-methylguanosine cap hypermethylation. Predicted to localize to cytosol and nucleus. Orthologous to human TGS1 (trimethylguanosine synthase 1); PARTICIPATES IN RNA transport pathway; INTERACTS WITH acrylamide; bisphenol A; tetrachloromethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC312947; Ncoa6ip; nuclear receptor coactivator 6 interacting protein; nuclear receptor coactivator 6-interacting protein; PIMT; PIPMT; PRIP-interacting protein with methyltransferase motif; trimethylguanosine synthase; trimethylguanosine synthase homolog; trimethylguanosine synthase homolog (S. cerevisiae)
Orthologs:
Homo sapiens (human) : TGS1 (trimethylguanosine synthase 1)  HGNC  Alliance
Mus musculus (house mouse) : Tgs1 (trimethylguanosine synthase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tgs1 (trimethylguanosine synthase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TGS1 (trimethylguanosine synthase 1)
Canis lupus familiaris (dog) : TGS1 (trimethylguanosine synthase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tgs1 (trimethylguanosine synthase 1)
Sus scrofa (pig) : TGS1 (trimethylguanosine synthase 1)
Chlorocebus sabaeus (African green monkey) : TGS1 (trimethylguanosine synthase 1)
Heterocephalus glaber (naked mole-rat) : Tgs1 (trimethylguanosine synthase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0516,413,356 - 16,446,881 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl516,413,356 - 16,446,881 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0521,194,620 - 21,228,145 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4516,818,391 - 16,851,916 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1516,818,178 - 16,850,318 (+)NCBI
Celera515,891,134 - 15,924,317 (+)NCBICelera
Cytogenetic Map5q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tgs1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309953
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.