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Gene: Pwwp3a (PWWP domain containing 3A, DNA repair factor) Rattus norvegicus

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Symbol:

Pwwp3a

Name:

PWWP domain containing 3A, DNA repair factor

RGD ID:

1308340

Description:

Predicted to enable nucleosome binding activity. Predicted to be involved in DNA repair and chromatin organization. Predicted to be located in nucleoplasm. Predicted to be active in cytosol and nucleus. Orthologous to human PWWP3A (PWWP domain containing 3A, DNA repair factor); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC362838; melanoma associated antigen (mutated) 1; melanoma ubiquitous mutated protein; MUM-1; Mum1; mutated melanoma-associated antigen 1; PWWP domain-containing DNA repair factor 3A; PWWP domain-containing protein MUM1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	10,115,865 - 10,132,696 (-)	NCBI		GRCr8
mRatBN7.2	7	9,465,180 - 9,482,053 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	9,465,195 - 9,481,966 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	12,347,987 - 12,364,957 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	14,223,326 - 14,240,295 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	12,084,740 - 12,101,476 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	12,331,288 - 12,348,263 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	12,331,416 - 12,346,475 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	12,500,998 - 12,517,922 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	10,976,555 - 10,993,327 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	10,976,437 - 11,017,779 (-)	NCBI
Celera	7	7,641,760 - 7,658,535 (-)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pwwp3a	Rat	cerebral creatine deficiency syndrome		ISO	RGD:1318053	8554872	ClinVar Annotator: match by term: Cerebral creatine deficiency syndrome	ClinVar	PMID:15108290\|PMID:28492532
Pwwp3a	Rat	cyclic hematopoiesis		ISO	RGD:1318053	8554872	ClinVar Annotator: match by term: Cyclical neutropenia	ClinVar	PMID:28492532

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pwwp3a	Rat	(+)-catechin	multiple interactions	ISO	RGD:1318053	6480464	[Catechin co-treated with Grape Seed Proanthocyanidins] results in decreased expression of PWWP3A mRNA	CTD	PMID:24763279
Pwwp3a	Rat	1,2-dimethylhydrazine	increases expression	ISO	RGD:1552936	6480464	1,2-Dimethylhydrazine results in increased expression of PWWP3A mRNA	CTD	PMID:22206623
Pwwp3a	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	RGD:1318053	6480464	Tetrachlorodibenzodioxin affects the expression of PWWP3A mRNA	CTD	PMID:22298810
Pwwp3a	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of PWWP3A mRNA	CTD	PMID:32109520
Pwwp3a	Rat	2,3,7,8-tetrachlorodibenzodioxine	multiple interactions	ISO	RGD:1552936	6480464	Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to PWWP3A promoter]	CTD	PMID:19654925
Pwwp3a	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	RGD:1552936	6480464	Tetrachlorodibenzodioxin affects the expression of PWWP3A mRNA	CTD	PMID:21570461
Pwwp3a	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of PWWP3A mRNA	CTD	PMID:22298810
Pwwp3a	Rat	2,6-dinitrotoluene	affects expression	EXP		6480464	2,6-dinitrotoluene affects the expression of PWWP3A mRNA	CTD	PMID:21346803
Pwwp3a	Rat	3-methylcholanthrene	multiple interactions	ISO	RGD:1318053	6480464	Methylcholanthrene promotes the reaction [AHR protein binds to PWWP3A promoter]	CTD	PMID:20348232
Pwwp3a	Rat	acrolein	multiple interactions	ISO	RGD:1318053	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Pwwp3a	Rat	acrylamide	increases expression	EXP		6480464	Acrylamide results in increased expression of PWWP3A mRNA	CTD	PMID:28959563
Pwwp3a	Rat	acrylamide	increases expression	ISO	RGD:1318053	6480464	Acrylamide results in increased expression of PWWP3A mRNA	CTD	PMID:32763439
Pwwp3a	Rat	aflatoxin B1	increases expression	ISO	RGD:1552936	6480464	Aflatoxin B1 results in increased expression of PWWP3A mRNA	CTD	PMID:19770486
Pwwp3a	Rat	all-trans-retinoic acid	increases expression	ISO	RGD:1318053	6480464	Tretinoin results in increased expression of PWWP3A mRNA	CTD	PMID:23724009
Pwwp3a	Rat	alpha-pinene	multiple interactions	ISO	RGD:1318053	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Pwwp3a	Rat	antirheumatic drug	increases expression	ISO	RGD:1318053	6480464	Antirheumatic Agents results in increased expression of PWWP3A mRNA	CTD	PMID:24449571
Pwwp3a	Rat	aristolochic acid A	decreases expression	ISO	RGD:1318053	6480464	aristolochic acid I results in decreased expression of PWWP3A mRNA	CTD	PMID:33212167
Pwwp3a	Rat	arsane	affects methylation	ISO	RGD:1318053	6480464	Arsenic affects the methylation of PWWP3A gene	CTD	PMID:25304211
Pwwp3a	Rat	arsenic atom	affects methylation	ISO	RGD:1318053	6480464	Arsenic affects the methylation of PWWP3A gene	CTD	PMID:25304211
Pwwp3a	Rat	arsenite(3-)	increases methylation	ISO	RGD:1318053	6480464	arsenite results in increased methylation of PWWP3A promoter	CTD	PMID:23974009
Pwwp3a	Rat	arsenous acid	decreases expression	ISO	RGD:1318053	6480464	Arsenic Trioxide results in decreased expression of PWWP3A mRNA	CTD	PMID:22521957
Pwwp3a	Rat	atrazine	decreases expression	ISO	RGD:1318053	6480464	Atrazine results in decreased expression of PWWP3A mRNA	CTD	PMID:22378314
Pwwp3a	Rat	benzo[a]pyrene	decreases methylation	ISO	RGD:1552936	6480464	Benzo(a)pyrene results in decreased methylation of PWWP3A exon; Benzo(a)pyrene results in decreased methylation of PWWP3A more ...	CTD	PMID:27901495
Pwwp3a	Rat	benzo[a]pyrene	decreases expression	ISO	RGD:1318053	6480464	Benzo(a)pyrene results in decreased expression of PWWP3A mRNA	CTD	PMID:32234424
Pwwp3a	Rat	benzo[a]pyrene	increases methylation	ISO	RGD:1318053	6480464	Benzo(a)pyrene results in increased methylation of PWWP3A 5' UTR	CTD	PMID:27901495
Pwwp3a	Rat	bisphenol A	decreases expression	ISO	RGD:1318053	6480464	bisphenol A results in decreased expression of PWWP3A mRNA	CTD	PMID:25047013
Pwwp3a	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of PWWP3A mRNA	CTD	PMID:25181051\|PMID:34947998
Pwwp3a	Rat	bisphenol F	decreases expression	ISO	RGD:1552936	6480464	bisphenol F results in decreased expression of PWWP3A mRNA	CTD	PMID:38685157
Pwwp3a	Rat	C60 fullerene	decreases expression	EXP		6480464	fullerene C60 results in decreased expression of PWWP3A mRNA	CTD	PMID:19167457
Pwwp3a	Rat	cadmium atom	decreases expression	ISO	RGD:1552936	6480464	Cadmium results in decreased expression of PWWP3A mRNA	CTD	PMID:24067728
Pwwp3a	Rat	cadmium dichloride	decreases expression	EXP		6480464	Cadmium Chloride results in decreased expression of PWWP3A mRNA	CTD	PMID:33453195
Pwwp3a	Rat	cadmium dichloride	decreases expression	ISO	RGD:1318053	6480464	Cadmium Chloride results in decreased expression of PWWP3A protein	CTD	PMID:38185225
Pwwp3a	Rat	carbon nanotube	decreases expression	ISO	RGD:1552936	6480464	Nanotubes, Carbon analog results in decreased expression of PWWP3A mRNA; Nanotubes, Carbon results in decreased more ...	CTD	PMID:25554681
Pwwp3a	Rat	CGP 52608	multiple interactions	ISO	RGD:1318053	6480464	CGP 52608 promotes the reaction [RORA protein binds to PWWP3A gene]	CTD	PMID:28238834
Pwwp3a	Rat	chlorpyrifos	decreases expression	ISO	RGD:1552936	6480464	Chlorpyrifos results in decreased expression of PWWP3A mRNA	CTD	PMID:37019170
Pwwp3a	Rat	cisplatin	multiple interactions	ISO	RGD:1318053	6480464	[Cisplatin co-treated with jinfukang] results in increased expression of PWWP3A mRNA	CTD	PMID:27392435
Pwwp3a	Rat	clofibrate	decreases expression	ISO	RGD:1552936	6480464	Clofibrate results in decreased expression of PWWP3A mRNA	CTD	PMID:23811191
Pwwp3a	Rat	cobalt dichloride	increases expression	ISO	RGD:1318053	6480464	cobaltous chloride results in increased expression of PWWP3A mRNA	CTD	PMID:19376846
Pwwp3a	Rat	cobalt dichloride	increases expression	ISO	RGD:1552936	6480464	cobaltous chloride results in increased expression of PWWP3A mRNA	CTD	PMID:21139344
Pwwp3a	Rat	copper(II) sulfate	decreases expression	ISO	RGD:1318053	6480464	Copper Sulfate results in decreased expression of PWWP3A mRNA	CTD	PMID:19549813
Pwwp3a	Rat	cyclosporin A	decreases expression	ISO	RGD:1318053	6480464	Cyclosporine results in decreased expression of PWWP3A mRNA	CTD	PMID:20106945
Pwwp3a	Rat	DDE	increases expression	ISO	RGD:1318053	6480464	Dichlorodiphenyl Dichloroethylene results in increased expression of PWWP3A mRNA	CTD	PMID:38568856
Pwwp3a	Rat	dexamethasone	decreases expression	ISO	RGD:1318053	6480464	Dexamethasone results in decreased expression of PWWP3A mRNA	CTD	PMID:25047013
Pwwp3a	Rat	diarsenic trioxide	decreases expression	ISO	RGD:1318053	6480464	Arsenic Trioxide results in decreased expression of PWWP3A mRNA	CTD	PMID:22521957
Pwwp3a	Rat	dorsomorphin	multiple interactions	ISO	RGD:1318053	6480464	[NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Pwwp3a	Rat	fenthion	decreases expression	ISO	RGD:1552936	6480464	Fenthion results in decreased expression of PWWP3A mRNA	CTD	PMID:34813904
Pwwp3a	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of PWWP3A mRNA	CTD	PMID:33387578
Pwwp3a	Rat	GSK-J4	decreases expression	ISO	RGD:1318053	6480464	GSK-J4 results in decreased expression of PWWP3A mRNA	CTD	PMID:29301935
Pwwp3a	Rat	hydrogen peroxide	increases expression	ISO	RGD:1318053	6480464	Hydrogen Peroxide results in increased expression of PWWP3A mRNA	CTD	PMID:18951874
Pwwp3a	Rat	ketamine	decreases expression	EXP		6480464	Ketamine results in decreased expression of PWWP3A mRNA	CTD	PMID:20080153
Pwwp3a	Rat	leflunomide	decreases expression	ISO	RGD:1318053	6480464	Leflunomide results in decreased expression of PWWP3A mRNA	CTD	PMID:28988120
Pwwp3a	Rat	lipopolysaccharide	multiple interactions	ISO	RGD:1318053	6480464	[S-(1,2-dichlorovinyl)cysteine co-treated with Lipopolysaccharides] results in decreased expression of PWWP3A mRNA	CTD	PMID:35811015
Pwwp3a	Rat	methidathion	decreases expression	ISO	RGD:1552936	6480464	methidathion results in decreased expression of PWWP3A mRNA	CTD	PMID:34813904
Pwwp3a	Rat	methylmercury chloride	decreases expression	ISO	RGD:1318053	6480464	methylmercuric chloride results in decreased expression of PWWP3A mRNA	CTD	PMID:28001369
Pwwp3a	Rat	okadaic acid	decreases expression	ISO	RGD:1318053	6480464	Okadaic Acid results in decreased expression of PWWP3A mRNA	CTD	PMID:38832940
Pwwp3a	Rat	ozone	multiple interactions	ISO	RGD:1318053	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Pwwp3a	Rat	paracetamol	decreases expression	ISO	RGD:1318053	6480464	Acetaminophen results in decreased expression of PWWP3A mRNA	CTD	PMID:21420995\|PMID:29067470
Pwwp3a	Rat	pirinixic acid	multiple interactions	ISO	RGD:1318053	6480464	[pirinixic acid binds to and results in increased activity of PPARA protein] which results in more ...	CTD	PMID:19710929
Pwwp3a	Rat	pirinixic acid	decreases expression	ISO	RGD:1552936	6480464	pirinixic acid results in decreased expression of PWWP3A mRNA	CTD	PMID:18445702
Pwwp3a	Rat	propiconazole	decreases expression	ISO	RGD:1552936	6480464	propiconazole results in decreased expression of PWWP3A mRNA	CTD	PMID:21278054
Pwwp3a	Rat	S-(1,2-dichlorovinyl)-L-cysteine	multiple interactions	ISO	RGD:1318053	6480464	[S-(1,2-dichlorovinyl)cysteine co-treated with Lipopolysaccharides] results in decreased expression of PWWP3A mRNA	CTD	PMID:35811015
Pwwp3a	Rat	SB 431542	multiple interactions	ISO	RGD:1318053	6480464	[NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Pwwp3a	Rat	Soman	decreases expression	EXP		6480464	Soman results in decreased expression of PWWP3A mRNA	CTD	PMID:19281266
Pwwp3a	Rat	temozolomide	decreases expression	ISO	RGD:1318053	6480464	Temozolomide results in decreased expression of PWWP3A mRNA	CTD	PMID:31758290
Pwwp3a	Rat	testosterone enanthate	affects expression	ISO	RGD:1318053	6480464	testosterone enanthate affects the expression of PWWP3A mRNA	CTD	PMID:17440010
Pwwp3a	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of PWWP3A mRNA	CTD	PMID:23411599
Pwwp3a	Rat	thioacetamide	decreases expression	EXP		6480464	Thioacetamide results in decreased expression of PWWP3A mRNA	CTD	PMID:34492290
Pwwp3a	Rat	titanium dioxide	increases methylation	ISO	RGD:1552936	6480464	titanium dioxide results in increased methylation of PWWP3A promoter	CTD	PMID:35295148
Pwwp3a	Rat	trichloroethene	increases methylation	EXP		6480464	Trichloroethylene results in increased methylation of PWWP3A gene	CTD	PMID:27618143
Pwwp3a	Rat	trichostatin A	decreases expression	ISO	RGD:1318053	6480464	trichostatin A results in decreased expression of PWWP3A mRNA	CTD	PMID:26272509
Pwwp3a	Rat	trichostatin A	multiple interactions	ISO	RGD:1318053	6480464	[NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Pwwp3a	Rat	triptonide	decreases expression	ISO	RGD:1552936	6480464	triptonide results in decreased expression of PWWP3A mRNA	CTD	PMID:33045310
Pwwp3a	Rat	troglitazone	decreases expression	ISO	RGD:1552936	6480464	Troglitazone results in decreased expression of PWWP3A mRNA	CTD	PMID:28973697
Pwwp3a	Rat	valproic acid	increases methylation	ISO	RGD:1318053	6480464	Valproic Acid results in increased methylation of PWWP3A gene	CTD	PMID:29154799
Pwwp3a	Rat	valproic acid	multiple interactions	ISO	RGD:1318053	6480464	[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Pwwp3a	Rat	valproic acid	decreases expression	ISO	RGD:1318053	6480464	Valproic Acid results in decreased expression of PWWP3A mRNA	CTD	PMID:23179753\|PMID:24383497\|PMID:26272509
Pwwp3a	Rat	valproic acid	affects expression	ISO	RGD:1318053	6480464	Valproic Acid affects the expression of PWWP3A mRNA	CTD	PMID:25979313
Pwwp3a	Rat	vinclozolin	decreases expression	EXP		6480464	vinclozolin results in decreased expression of PWWP3A mRNA	CTD	PMID:23555832
Pwwp3a	Rat	zinc atom	multiple interactions	ISO	RGD:1318053	6480464	[PCI 5002 co-treated with Zinc] results in increased expression of PWWP3A mRNA	CTD	PMID:18593933
Pwwp3a	Rat	zinc(0)	multiple interactions	ISO	RGD:1318053	6480464	[PCI 5002 co-treated with Zinc] results in increased expression of PWWP3A mRNA	CTD	PMID:18593933

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pwwp3a	Rat	biological_process		ND		1598407	07/2014: no relevant rat data	RGD
Pwwp3a	Rat	chromatin organization	involved_in	ISS	UniProtKB:Q2TAK8	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Pwwp3a	Rat	chromatin organization	involved_in	IBA	PANTHER:PTN001263565\|UniProtKB:Q2TAK8	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pwwp3a	Rat	chromatin organization	involved_in	ISO	RGD:1318053	1624291	PMID:20347427	RGD	PMID:20347427
Pwwp3a	Rat	chromatin organization	involved_in	IEA	UniProtKB:Q2TAK8\|ensembl:ENSP00000467287	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pwwp3a	Rat	DNA damage response	involved_in	IEA	UniProtKB-KW:KW-0227	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pwwp3a	Rat	DNA repair	involved_in	ISS	UniProtKB:Q2TAK8	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Pwwp3a	Rat	DNA repair	involved_in	IEA	UniProtKB-KW:KW-0234	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pwwp3a	Rat	DNA repair	involved_in	IBA	PANTHER:PTN001263565\|UniProtKB:Q2TAK8	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pwwp3a	Rat	DNA repair	involved_in	ISO	RGD:1318053	1624291	PMID:20347427	RGD	PMID:20347427
Pwwp3a	Rat	DNA repair	involved_in	IEA	UniProtKB:Q2TAK8\|ensembl:ENSP00000467287	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pwwp3a	Rat	cytosol	located_in	IEA	UniProtKB:Q2TAK8\|ensembl:ENSP00000467287	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pwwp3a	Rat	cytosol	is_active_in	IBA	PANTHER:PTN001263565\|UniProtKB:Q2TAK8	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pwwp3a	Rat	cytosol	located_in	ISO	RGD:1318053\|UniProtKB:Q2TAK8-1\|UniProtKB:Q2TAK8-3	1624291		RGD	GO_REF:0000052
Pwwp3a	Rat	cytosol	located_in	IEA	UniProtKB:K7EP97\|ensembl:ENSP00000467287	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pwwp3a	Rat	nucleoplasm	located_in	IEA	UniProtKB:Q2TAK8\|ensembl:ENSP00000467287	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pwwp3a	Rat	nucleoplasm	located_in	ISO	RGD:1318053\|UniProtKB:Q2TAK8-1\|UniProtKB:Q2TAK8-3	1624291		RGD	GO_REF:0000052
Pwwp3a	Rat	nucleoplasm	located_in	IEA	UniProtKB:K7EP97\|ensembl:ENSP00000467287	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pwwp3a	Rat	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Pwwp3a	Rat	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Pwwp3a	Rat	nucleus	located_in	IEA	UniProtKB:Q2TAK8\|ensembl:ENSP00000467287	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pwwp3a	Rat	nucleus	is_active_in	IBA	PANTHER:PTN001263565\|UniProtKB:Q2TAK8	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pwwp3a	Rat	nucleus	located_in	ISO	RGD:1318053	1624291	PMID:20347427	RGD	PMID:20347427
Pwwp3a	Rat	nucleus	located_in	ISS	UniProtKB:Q2TAK8	1600115	GO_REF:0000024	UniProt	GO_REF:0000024

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pwwp3a	Rat	nucleosome binding	enables	ISS	UniProtKB:Q2TAK8	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Pwwp3a	Rat	nucleosome binding	enables	IBA	PANTHER:PTN001263565\|UniProtKB:Q2TAK8	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Pwwp3a	Rat	nucleosome binding	enables	ISO	RGD:1318053	1624291	PMID:20347427	RGD	PMID:20347427
Pwwp3a	Rat	nucleosome binding	enables	IEA	UniProtKB:Q2TAK8\|ensembl:ENSP00000467287	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Pwwp3a	Rat	protein binding	enables	ISO	RGD:1318053	1624291	UniProtKB:Q12888 PMID:20347427	RGD	PMID:20347427
Pwwp3a	Rat	protein binding	enables	ISO	RGD:1318053,UniProtKB:Q2TAK8-2	1624291	UniProtKB:Q53EZ4\|UniProtKB:Q9HD26 PMID:25416956	RGD	PMID:25416956

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pwwp3a	Rat	ataxia telangiectasia-mutated (ATM) signaling pathway		ISO	RGD:1318053	8661237		RGD

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Double-strand break repair: 53BP1 comes into focus.	Panier S and Boulton SJ, Nat Rev Mol Cell Biol. 2014 Jan;15(1):7-18. doi: 10.1038/nrm3719. Epub 2013 Dec 11.
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Comprehensive gene review and curation	RGD comprehensive gene curation

PMID:8889548	PMID:12477932	PMID:20347427

Pwwp3a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	10,115,865 - 10,132,696 (-)	NCBI		GRCr8
mRatBN7.2	7	9,465,180 - 9,482,053 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	9,465,195 - 9,481,966 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	12,347,987 - 12,364,957 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	14,223,326 - 14,240,295 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	12,084,740 - 12,101,476 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	12,331,288 - 12,348,263 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	12,331,416 - 12,346,475 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	12,500,998 - 12,517,922 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	10,976,555 - 10,993,327 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	10,976,437 - 11,017,779 (-)	NCBI
Celera	7	7,641,760 - 7,658,535 (-)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

PWWP3A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	1,354,959 - 1,378,429 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	1,354,711 - 1,378,431 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	1,354,958 - 1,378,428 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	1,306,010 - 1,329,427 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	1,306,009 - 1,329,427	NCBI
Celera	19	1,289,298 - 1,312,710 (+)	NCBI		Celera
Cytogenetic Map	19	p13.3	NCBI
HuRef	19	1,131,120 - 1,153,286 (+)	NCBI		HuRef
CHM1_1	19	1,356,347 - 1,378,455 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	1,324,929 - 1,348,426 (+)	NCBI		T2T-CHM13v2.0

Pwwp3a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	80,062,265 - 80,082,415 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	80,062,268 - 80,079,737 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	80,226,431 - 80,245,144 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	80,226,434 - 80,243,903 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	79,689,343 - 79,707,889 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	79,631,455 - 79,647,030 (+)	NCBI		MGSCv36	mm8
Celera	10	81,241,471 - 81,260,017 (+)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	39.72	NCBI

Pwwp3a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	6,552,584 - 6,573,016 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955495	6,552,305 - 6,574,191 (-)	NCBI	ChiLan1.0	ChiLan1.0

PWWP3A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	5,700,416 - 5,724,009 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	4,937,061 - 4,960,660 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	19	1,331,312 - 1,352,260 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	1,331,312 - 1,352,260 (+)	Ensembl	panpan1.1		panPan2

PWWP3A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	57,452,289 - 57,469,207 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	57,452,300 - 57,468,692 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	57,243,291 - 57,260,207 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	58,182,632 - 58,199,541 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	58,182,635 - 58,199,006 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	57,238,560 - 57,255,474 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	57,718,264 - 57,735,216 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	57,920,266 - 57,937,159 (-)	NCBI		UU_Cfam_GSD_1.0

Pwwp3a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	217,124,884 - 217,158,790 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936588	692,436 - 709,945 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936588	692,436 - 709,899 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PWWP3A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	77,089,917 - 77,111,205 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	77,089,915 - 77,111,236 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	77,982,199 - 78,003,524 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PWWP3A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	1,123,556 - 1,145,761 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	1,125,080 - 1,145,358 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666081	7,715,152 - 7,738,412 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pwwp3a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624828	7,309,119 - 7,334,176 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624828	7,309,629 - 7,334,165 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Pwwp3a
75 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	29
Count of miRNA genes:	29
Interacting mature miRNAs:	29
Transcripts:	ENSRNOT00000060708
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61410	Bw19	Body weight QTL 19	6.2	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	44782185	Rat
1300176	Hrtrt10	Heart rate QTL 10	3.19		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	7	664270	26029351	Rat
9590102	Sffal5	Serum free fatty acids level QTL 5	8.62	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	7	5329019	50329019	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	9462246	98011544	Rat
631503	Bp102	Blood pressure QTL 102	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	1	44822433	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
10755438	Coatc9	Coat color QTL 9		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	3529280	48529280	Rat
9590142	Scort5	Serum corticosterone level QTL 5	24.4	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	1	31962314	Rat
2298547	Neuinf5	Neuroinflammation QTL 5	3.7		nervous system integrity trait (VT:0010566)	spinal cord Cd74 protein level (CMO:0002131)	7	9462246	58265113	Rat
10059592	Kidm45	Kidney mass QTL 45	3.95	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	7573985	52573985	Rat
2317047	Wbc4	White blood cell count QTL 4		0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	7	1	35342956	Rat
10755440	Coatc10	Coat color QTL 10		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	7496499	52496499	Rat
2298550	Neuinf6	Neuroinflammation QTL 6	3.3		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	7	1	27829089	Rat
724560	Plsm3	Polydactyly-luxate syndrome (PLS) morphotypes QTL 3		0.0003	tibia length (VT:0004357)	tibia length (CMO:0000450)	7	1	34000259	Rat
7411566	Bw136	Body weight QTL 136	10.4	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	1	31962314	Rat

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001108736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC141331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC160828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB784307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK597826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK603499	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK839769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CO383806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CV126168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000060708 ⟹ ENSRNOP00000057438

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	9,465,195 - 9,481,966 (-)	Ensembl
Rnor_6.0 Ensembl	7	12,331,416 - 12,346,475 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113234 ⟹ ENSRNOP00000079260

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	9,467,035 - 9,481,966 (-)	Ensembl

RefSeq Acc Id:

NM_001108736 ⟹ NP_001102206

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,115,865 - 10,132,637 (-)	NCBI
mRatBN7.2	7	9,465,195 - 9,481,969 (-)	NCBI
Rnor_6.0	7	12,331,415 - 12,348,187 (-)	NCBI
Rnor_5.0	7	12,500,998 - 12,517,922 (-)	NCBI
RGSC_v3.4	7	10,976,555 - 10,993,327 (-)	RGD
Celera	7	7,641,760 - 7,658,535 (-)	RGD

Sequence:

show sequence

CGCGGGGATCTGCGCGGCGGCGGAGGCGGGACCTCTGGCATCAGTAGCACCGTGAGCCCAGACATTCCTCTCTGAGTCATGACGGATGCCAAGTATGTCCTCTGCCGATGGGAGAAGCGACTGTGGCC
TGCAAAGGTTTTGGCCAGAACTGAGACTTCAGCAAAAAACAAGAGAAAAAAGGAATTCTTTCTAGATGTTCAAATACTCTCACTAAAGGAAAAGATCCAGGTTAAGAGCTCAGCCGTGGAGGCACTGC
AGAAGTCACACATTGAGAACATTGCCGCCTTCTTGGCCTCTCAGAATGAAGTCCCAGCTACTCCTCTGGAGGAGCTGACTTACCGACGGTCCCTGCGAGTGGCCCTGGATGTCTTGAACGAGAGGACC
AGTTTGAGTCCTGAAAGTCATCCAGTCGAAAATGGGAGCACACCATCTCAGAAGGGCAAGCCAGATGCAGATATGGCCTCGCAGGTCTCTAGTGCTCCTTCTCCATCTTTTCTCAGTGAAGATGATCA
GGCTGTGGCAGCCCAGTGTGCATCCAAGAGGAGGTGGGAGTGCAGTCCAAAAAGCCTGTCGCCGTTGTCTGCCTCGGAAGAGGATCTCAGGTGCAAAGTGGACCCCAAGACAGGCCTCTCAGAGAGTG
GAGCCCTGGGGACTGAAGTGCCTGCCCCCACTGGGGATGAGTCTCAGAATGGCTCTGGGTCACAGCTGGACCATGGACAGGAGAGCACAACCAAAAAGAGACAGAGGAATTCGGGAGAGAAACCTGCC
CGGCGCGGAAAAGCAGAGTCTGGCCTTTCCAAGGGAGACAGTGTCGCAGAGAGCGGAGGACAGGCAAGCAGCTGTGTGGCCCTGGCTTCACCCAGGCTGCCCTCCCAAACCTGGGAGGGGGATCCATG
TGCTGGAGTCGAAGGCTGTGACCCAGTTGAGTCATCCGGCAACATCAGGCCGCTTCTGGACTCTGAGAGAAGCAAAGGACGCCTCACAAAGAGGCCACGCTTGGACGGAGGCCGGAACCCACTGCCCA
GACATCTAGGAACCAGAACTGTGGGGGCAGTGCCCTCCCGTAGGAGCTGCTCTGGGGAGGTCACGACGCTGCGCAGGGCTGGAGACAGTGACAGACCAGAGGAAGATCCTATGTCTTCAGAAGAATCT
ACAGGGTTCAAGTCCGTCCACTCCCTGCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAACCACCCCGGATCCTTCTGTATCACGAACCACGATCATTTGAAGTAGGAATGCT
GGTCTGGCTTAAATACCAAAAATACCCATTCTGGCCAGCCGTGGTCAAGAGTGTCCGGCGGAGGGACAAGAAGGCCAGTGTGCTCTTCATTGAGGGCAACATGAATCCCAAGGGCCGAGGAATCACCG
TGTCGCTGCGACGGCTCAAGCACTTTGACTGCAAGGAAAAGCATGCACTACTGGACAGAGCCAAAGAGGACTTTGCCCAGGCTATTGGCTGGTGTGTCTCGCTTATCACTGACTACCGCGTGCGGCTG
GGCTGCGGCTCCTTCGCCGGGTCGTTCTTGGAATATTACGCTGCTGATATCAGCTATCCTGTGCGCAAGTCTATCCAACAGGACGTCCTGGGGACCAGGTTTCCTCAGCTGGGCAAGGGGGACCCTGA
GGAGCCTATGGGGGACAGCCGGCTGGGACAGTGGCGGCCATGCAGGAAGGTGCTGCCTGACCGCTCCAGGGCTGCCCGGGATAAAGCCAACCAGAAGCTGGTGGAGTACATCGTGAAGGCCAAGGGTG
CAGAGAGCCACCTGCGGGCTATCCTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAATCAGTACGTGACATGCATGGAGACGTACCTGGAGGATGAGGCGCAGCTGGATGAG
GTGGTGGAGTACCTGCAGGGCGTCTGCCGAGACATGGATGGCGAGATGCCTGCGCGCGGCAGCGGCGACCGCATCCGTTTCATCCTGGATGTGCTGCTGCCTGAGGCGATCATCTGCGCCATCTCGGC
AGTGGAGGCAGTGGACTACAAGACAGCCGAGCAGAAGTACCTCCGTGGCCCCACACTCAGCTACCGGGAAAAGGAAATCTTTGACAATGAACTCCTGGAGGAGAGGAACCGTCGCCGTCGCTGATGCC
GTAGTCTCCACCTGGCCAGCACCGTGTCTGTGGCCTGCCAGAGGCCTGTGAGAATGTGCTAGAAGCAAGAGGCCTAGTAATGTGCTGACTTTGATCTGTGCATGGGTTCTGCGTCTTCAGCCCTGAGC
CTGGGAGATCAGAGGCCATCTTCACACTAGAAGACTGCTGCATCTATGAACAGCTGCTTCTGGAAGTTTCTGTGTGTGTACGCGTGTATGTTTGGTTTTATTTTTTTAATTATTATTTTGTTTATAAA
TGCGTTTGAATGCAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006240973 ⟹ XP_006241035

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,115,865 - 10,132,696 (-)	NCBI
mRatBN7.2	7	9,465,180 - 9,482,053 (-)	NCBI
Rnor_6.0	7	12,331,288 - 12,348,263 (-)	NCBI
Rnor_5.0	7	12,500,998 - 12,517,922 (-)	NCBI

Sequence:

show sequence

GCAGGTACGCGGCTTCCATTGGGCGGTCGTGTGGGCGGGGCTCGGCGCCGCTGTGAGGCAGGTC
CCGCCCCCAGCCCGCGGGGATCTGCGCGGCGGCGGAGGCGGGACCTCTGGCATCAGTAGCACCGTGAGCCCAGACATTCCTCTCTGAGTCATGACGGATGCCAAGTATGTCCTCTGCCGATGGGAGAA
GCGACTGTGGCCTGCAAAGGTTTTGGCCAGAACTGAGACTTCAGCAAAAAACAAGAGAAAAAAGGAATTCTTTCTAGATGTTCAAATACTCTCACTAAAGGAAAAGATCCAGGTTAAGAGCTCAGCCG
TGGAGGCACTGCAGAAGTCACACATTGAGAACATTGCCGCCTTCTTGGCCTCTCAGAATGAAGTCCCAGCTACTCCTCTGGAGGAGCTGACTTACCGACGGTCCCTGCGAGTGGCCCTGGATGTCTTG
AACGAGAGGACCAGTTTGAGTCCTGAAAGTCATCCAGTCGAAAATGGGAGCACACCATCTCAGAAGGGCAAGCCAGATGCAGATATGGCCTCGCAGGTCTCTAGTGCTCCTTCTCCATCTTTTCTCAG
TGAAGATGATCAGGCTGTGGCAGCCCAGTGTGCATCCAAGAGGAGGTGGGAGTGCAGTCCAAAAAGCCTGTCGCCGTTGTCTGCCTCGGAAGAGGATCTCAGGTGCAAAGTGGACCCCAAGACAGGCC
TCTCAGAGAGTGGAGCCCTGGGGACTGAAGTGCCTGCCCCCACTGGGGATGAGTCTCAGAATGGCTCTGGGTCACAGCTGGACCATGGACAGGAGAGCACAACCAAAAAGAGACAGAGGAATTCGGGA
GAGAAACCTGCCCGGCGCGGAAAAGCAGAGTCTGGCCTTTCCAAGGGAGACAGTGTCGCAGAGAGCGGAGGACAGGCAAGCAGCTGTGTGGCCCTGGCTTCACCCAGGCTGCCCTCCCAAACCTGGGA
GGGGGATCCATGTGCTGGAGTCGAAGGCTGTGACCCAGTTGAGTCATCCGGCAACATCAGGCCGCTTCTGGACTCTGAGAGAAGCAAAGGACGCCTCACAAAGAGGCCACGCTTGGACGGAGGCCGGA
ACCCACTGCCCAGACATCTAGGAACCAGAACTGTGGGGGCAGTGCCCTCCCGTAGGAGCTGCTCTGGGGAGGTCACGACGCTGCGCAGGGCTGGAGACAGTGACAGACCAGAGGAAGCAGATCCTATG
TCTTCAGAAGAATCTACAGGGTTCAAGTCCGTCCACTCCCTGCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAACCACCCCGGATCCTTCTGTATCACGAACCACGATCATT
TGAAGTAGGAATGCTGGTCTGGCTTAAATACCAAAAATACCCATTCTGGCCAGCCGTGGTCAAGAGTGTCCGGCGGAGGGACAAGAAGGCCAGTGTGCTCTTCATTGAGGGCAACATGAATCCCAAGG
GCCGAGGAATCACCGTGTCGCTGCGACGGCTCAAGCACTTTGACTGCAAGGAAAAGCATGCACTACTGGACAGAGCCAAAGAGGACTTTGCCCAGGCTATTGGCTGGTGTGTCTCGCTTATCACTGAC
TACCGCGTGCGGCTGGGCTGCGGCTCCTTCGCCGGGTCGTTCTTGGAATATTACGCTGCTGATATCAGCTATCCTGTGCGCAAGTCTATCCAACAGGACGTCCTGGGGACCAGGTTTCCTCAGCTGGG
CAAGGGGGACCCTGAGGAGCCTATGGGGGACAGCCGGCTGGGACAGTGGCGGCCATGCAGGAAGGTGCTGCCTGACCGCTCCAGGGCTGCCCGGGATAAAGCCAACCAGAAGCTGGTGGAGTACATCG
TGAAGGCCAAGGGTGCAGAGAGCCACCTGCGGGCTATCCTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAATCAGTACGTGACATGCATGGAGACGTACCTGGAGGATGAG
GCGCAGCTGGATGAGGTGGTGGAGTACCTGCAGGGCGTCTGCCGAGACATGGATGGCGAGATGCCTGCGCGCGGCAGCGGCGACCGCATCCGTTTCATCCTGGATGTGCTGCTGCCTGAGGCGATCAT
CTGCGCCATCTCGGCAGTGGAGGCAGTGGACTACAAGACAGCCGAGCAGAAGTACCTCCGTGGCCCCACACTCAGCTACCGGGAAAAGGAAATCTTTGACAATGAACTCCTGGAGGAGAGGAACCGTC
GCCGTCGCTGATGCCGTAGTCTCCACCTGGCCAGCACCGTGTCTGTGGCCTGCCAGAGGCCTGTGAGAATGTGCTAGAAGCAAGAGGCCTAGTAATGTGCTGACTTTGATCTGTGCATGGGTTCTGCG
TCTTCAGCCCTGAGCCTGGGAGATCAGAGGCCATCTTCACACTAGAAGACTGCTGCATCTATGAACAGCTGCTTCTGGAAGTTTCTGTGTGTGTACGCGTGTATGTTTGGTTTTATTTTTTTAATTAT
TATTTTGTTTATAAATGCGTTTGAATGCACATGTTTCATGGTCATTGCAGTGTGGCTGGCATGTACGCTTAGGTCTTGTGTTGCTTGGTGTGTCAGCCCTACAGAGTTTCTGGAAAGACTGATTTGAA
CACACAGTTCCCAGAGCATTGACATGTT

hide sequence

RefSeq Acc Id:

XM_006240974 ⟹ XP_006241036

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,115,865 - 10,132,643 (-)	NCBI
mRatBN7.2	7	9,465,180 - 9,481,987 (-)	NCBI
Rnor_6.0	7	12,331,288 - 12,348,153 (-)	NCBI
Rnor_5.0	7	12,500,998 - 12,517,922 (-)	NCBI

Sequence:

show sequence

GCGCGGGCTTGCGGCGGCGGTTGGCGGGCGGGCTTCCGCCGTTGGGACCGCCGCGGCCTGGTCG
CTCAGGCTCGGACGCCGCGTCAGGCGGGCTGGGGGGACCTCTGGCATCAGTAGCACCGTGAGCCCAGACATTCCTCTCTGAGTCATGACGGATGCCAAGTATGTCCTCTGCCGATGGGAGAAGCGACT
GTGGCCTGCAAAGGTTTTGGCCAGAACTGAGACTTCAGCAAAAAACAAGAGAAAAAAGGAATTCTTTCTAGATGTTCAAATACTCTCACTAAAGGAAAAGATCCAGGTTAAGAGCTCAGCCGTGGAGG
CACTGCAGAAGTCACACATTGAGAACATTGCCGCCTTCTTGGCCTCTCAGAATGAAGTCCCAGCTACTCCTCTGGAGGAGCTGACTTACCGACGGTCCCTGCGAGTGGCCCTGGATGTCTTGAACGAG
AGGACCAGTTTGAGTCCTGAAAGTCATCCAGTCGAAAATGGGAGCACACCATCTCAGAAGGGCAAGCCAGATGCAGATATGGCCTCGCAGGTCTCTAGTGCTCCTTCTCCATCTTTTCTCAGTGAAGA
TGATCAGGCTGTGGCAGCCCAGTGTGCATCCAAGAGGAGGTGGGAGTGCAGTCCAAAAAGCCTGTCGCCGTTGTCTGCCTCGGAAGAGGATCTCAGGTGCAAAGTGGACCCCAAGACAGGCCTCTCAG
AGAGTGGAGCCCTGGGGACTGAAGTGCCTGCCCCCACTGGGGATGAGTCTCAGAATGGCTCTGGGTCACAGCTGGACCATGGACAGGAGAGCACAACCAAAAAGAGACAGAGGAATTCGGGAGAGAAA
CCTGCCCGGCGCGGAAAAGCAGAGTCTGGCCTTTCCAAGGGAGACAGTGTCGCAGAGAGCGGAGGACAGGCAAGCAGCTGTGTGGCCCTGGCTTCACCCAGGCTGCCCTCCCAAACCTGGGAGGGGGA
TCCATGTGCTGGAGTCGAAGGCTGTGACCCAGTTGAGTCATCCGGCAACATCAGGCCGCTTCTGGACTCTGAGAGAAGCAAAGGACGCCTCACAAAGAGGCCACGCTTGGACGGAGGCCGGAACCCAC
TGCCCAGACATCTAGGAACCAGAACTGTGGGGGCAGTGCCCTCCCGTAGGAGCTGCTCTGGGGAGGTCACGACGCTGCGCAGGGCTGGAGACAGTGACAGACCAGAGGAAGCAGATCCTATGTCTTCA
GAAGAATCTACAGGGTTCAAGTCCGTCCACTCCCTGCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAACCACCCCGGATCCTTCTGTATCACGAACCACGATCATTTGAAGT
AGGAATGCTGGTCTGGCTTAAATACCAAAAATACCCATTCTGGCCAGCCGTGGTCAAGAGTGTCCGGCGGAGGGACAAGAAGGCCAGTGTGCTCTTCATTGAGGGCAACATGAATCCCAAGGGCCGAG
GAATCACCGTGTCGCTGCGACGGCTCAAGCACTTTGACTGCAAGGAAAAGCATGCACTACTGGACAGAGCCAAAGAGGACTTTGCCCAGGCTATTGGCTGGTGTGTCTCGCTTATCACTGACTACCGC
GTGCGGCTGGGCTGCGGCTCCTTCGCCGGGTCGTTCTTGGAATATTACGCTGCTGATATCAGCTATCCTGTGCGCAAGTCTATCCAACAGGACGTCCTGGGGACCAGGTTTCCTCAGCTGGGCAAGGG
GGACCCTGAGGAGCCTATGGGGGACAGCCGGCTGGGACAGTGGCGGCCATGCAGGAAGGTGCTGCCTGACCGCTCCAGGGCTGCCCGGGATAAAGCCAACCAGAAGCTGGTGGAGTACATCGTGAAGG
CCAAGGGTGCAGAGAGCCACCTGCGGGCTATCCTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAATCAGTACGTGACATGCATGGAGACGTACCTGGAGGATGAGGCGCAG
CTGGATGAGGTGGTGGAGTACCTGCAGGGCGTCTGCCGAGACATGGATGGCGAGATGCCTGCGCGCGGCAGCGGCGACCGCATCCGTTTCATCCTGGATGTGCTGCTGCCTGAGGCGATCATCTGCGC
CATCTCGGCAGTGGAGGCAGTGGACTACAAGACAGCCGAGCAGAAGTACCTCCGTGGCCCCACACTCAGCTACCGGGAAAAGGAAATCTTTGACAATGAACTCCTGGAGGAGAGGAACCGTCGCCGTC
GCTGATGCCGTAGTCTCCACCTGGCCAGCACCGTGTCTGTGGCCTGCCAGAGGCCTGTGAGAATGTGCTAGAAGCAAGAGGCCTAGTAATGTGCTGACTTTGATCTGTGCATGGGTTCTGCGTCTTCA
GCCCTGAGCCTGGGAGATCAGAGGCCATCTTCACACTAGAAGACTGCTGCATCTATGAACAGCTGCTTCTGGAAGTTTCTGTGTGTGTACGCGTGTATGTTTGGTTTTATTTTTTTAATTATTATTTT
GTTTATAAATGCGTTTGAATGCACATGTTTCATGGTCATTGCAGTGTGGCTGGCATGTACGCTTAGGTCTTGTGTTGCTTGGTGTGTCAGCCCTACAGAGTTTCTGGAAAGACTGATTTGAACACACA
GTTCCCAGAGCATTGACATGTT

hide sequence

RefSeq Acc Id:

XM_006240975 ⟹ XP_006241037

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,115,865 - 10,132,561 (-)	NCBI
mRatBN7.2	7	9,465,180 - 9,481,789 (-)	NCBI
Rnor_6.0	7	12,331,288 - 12,348,006 (-)	NCBI
Rnor_5.0	7	12,500,998 - 12,517,922 (-)	NCBI

Sequence:

show sequence

GGGAGCCTGGGGAAGGGCGGCGGCTATGCCGGACCAGCTGGGCCGCGGCTGGTTCTGCGCAGGG
CCCACGTGCAGCCGAGGCCCTTGGAGGCTGAGACCCTCCAGTTTCCTGCTGCGAACCCTGTATTTCTGACCTAAATCCCCTTCTCTGCAGCCTGAGCCCCCAACCCTGCTGAGAGCTTCGTATTTCCG
GCCTGGTCCCTATCTTCTGCAGCCTGAACCCCATATTTCCGGCTTTATACCCCTCTTCTGCAACATGAGCCCCAAGTTTCCCACCTTCTCCCCCTCTTTACAGCCTGAACCCTGGTCCCCTGCTGAGA
CCCCGAGTTTCCTCCTGGAAGCCCCGTATTAACCCGATACCTTGACCTCTGCAGTATCAACCAACATTTGCCTTTCTGTACAGTCTGAATCGGGAGTTAATTGCTTGGTACCCCATCTCTGCAGCCAG
AATCTGTGTCCTTGCTGAGGATTCTGAATTTCCTGCCTCATTTCTTCCCTTTGGATCCCCTCTCTGCAGTCTAAGCCCCAATTTGCTGCTCAGACCTTATCCCTGTTGTGAACCCCGAGTTTTGAGTC
AAAATCGCAGTCTTTGTGGCCCACATTCCCTCTAGCCTGACCTCCCGTTCATTGCTTTAAACCTGTATTTCCTGCCGAACTCAAGTTTCTGCAGCCTGAATCTCAGTCCCTTTGGTGAACCCGGTCTT
TGCTTCCTTAAGTTACCCACTTCTGTGGACCTGATCCCTGCTGCAAACCCCACGTCTTCTACCTGACTCTCCTACCTCCTCCCTTACCTTGGACCCCATATTTGCTGCCCAAGCCCCAGTCCCTGCTA
CCTGAGCCTCATCTTTTGTTACCTGAATTCCCATAACCGCCGCGGCCAGCGTCCTTGTTGCCTCCTGAAACCCCAGCCTGCTTTAATGAACTCCTGTCTTTGCTGGGAACCCTGTACCCCTCTGGAGA
GCCTCTCCTGCTTCTATGAGCCCTTCTACCACATACACCCTTGTTTCTGCTGGGACCTCTGGCATCAGTAGCACCGTGAGCCCAGACATTCCTCTCTGAGTCATGACGGATGCCAAGTATGTCCTCTG
CCGATGGGAGAAGCGACTGTGGCCTGCAAAGGTTTTGGCCAGAACTGAGACTTCAGCAAAAAACAAGAGAAAAAAGGAATTCTTTCTAGATGTTCAAATACTCTCACTAAAGGAAAAGATCCAGGTTA
AGAGCTCAGCCGTGGAGGCACTGCAGAAGTCACACATTGAGAACATTGCCGCCTTCTTGGCCTCTCAGAATGAAGTCCCAGCTACTCCTCTGGAGGAGCTGACTTACCGACGGTCCCTGCGAGTGGCC
CTGGATGTCTTGAACGAGAGGACCAGTTTGAGTCCTGAAAGTCATCCAGTCGAAAATGGGAGCACACCATCTCAGAAGGGCAAGCCAGATGCAGATATGGCCTCGCAGGTCTCTAGTGCTCCTTCTCC
ATCTTTTCTCAGTGAAGATGATCAGGCTGTGGCAGCCCAGTGTGCATCCAAGAGGAGGTGGGAGTGCAGTCCAAAAAGCCTGTCGCCGTTGTCTGCCTCGGAAGAGGATCTCAGGTGCAAAGTGGACC
CCAAGACAGGCCTCTCAGAGAGTGGAGCCCTGGGGACTGAAGTGCCTGCCCCCACTGGGGATGAGTCTCAGAATGGCTCTGGGTCACAGCTGGACCATGGACAGGAGAGCACAACCAAAAAGAGACAG
AGGAATTCGGGAGAGAAACCTGCCCGGCGCGGAAAAGCAGAGTCTGGCCTTTCCAAGGGAGACAGTGTCGCAGAGAGCGGAGGACAGGCAAGCAGCTGTGTGGCCCTGGCTTCACCCAGGCTGCCCTC
CCAAACCTGGGAGGGGGATCCATGTGCTGGAGTCGAAGGCTGTGACCCAGTTGAGTCATCCGGCAACATCAGGCCGCTTCTGGACTCTGAGAGAAGCAAAGGACGCCTCACAAAGAGGCCACGCTTGG
ACGGAGGCCGGAACCCACTGCCCAGACATCTAGGAACCAGAACTGTGGGGGCAGTGCCCTCCCGTAGGAGCTGCTCTGGGGAGGTCACGACGCTGCGCAGGGCTGGAGACAGTGACAGACCAGAGGAA
GCAGATCCTATGTCTTCAGAAGAATCTACAGGGTTCAAGTCCGTCCACTCCCTGCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAACCACCCCGGATCCTTCTGTATCACGA
ACCACGATCATTTGAAGTAGGAATGCTGGTCTGGCTTAAATACCAAAAATACCCATTCTGGCCAGCCGTGGTCAAGAGTGTCCGGCGGAGGGACAAGAAGGCCAGTGTGCTCTTCATTGAGGGCAACA
TGAATCCCAAGGGCCGAGGAATCACCGTGTCGCTGCGACGGCTCAAGCACTTTGACTGCAAGGAAAAGCATGCACTACTGGACAGAGCCAAAGAGGACTTTGCCCAGGCTATTGGCTGGTGTGTCTCG
CTTATCACTGACTACCGCGTGCGGCTGGGCTGCGGCTCCTTCGCCGGGTCGTTCTTGGAATATTACGCTGCTGATATCAGCTATCCTGTGCGCAAGTCTATCCAACAGGACGTCCTGGGGACCAGGTT
TCCTCAGCTGGGCAAGGGGGACCCTGAGGAGCCTATGGGGGACAGCCGGCTGGGACAGTGGCGGCCATGCAGGAAGGTGCTGCCTGACCGCTCCAGGGCTGCCCGGGATAAAGCCAACCAGAAGCTGG
TGGAGTACATCGTGAAGGCCAAGGGTGCAGAGAGCCACCTGCGGGCTATCCTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAATCAGTACGTGACATGCATGGAGACGTAC
CTGGAGGATGAGGCGCAGCTGGATGAGGTGGTGGAGTACCTGCAGGGCGTCTGCCGAGACATGGATGGCGAGATGCCTGCGCGCGGCAGCGGCGACCGCATCCGTTTCATCCTGGATGTGCTGCTGCC
TGAGGCGATCATCTGCGCCATCTCGGCAGTGGAGGCAGTGGACTACAAGACAGCCGAGCAGAAGTACCTCCGTGGCCCCACACTCAGCTACCGGGAAAAGGAAATCTTTGACAATGAACTCCTGGAGG
AGAGGAACCGTCGCCGTCGCTGATGCCGTAGTCTCCACCTGGCCAGCACCGTGTCTGTGGCCTGCCAGAGGCCTGTGAGAATGTGCTAGAAGCAAGAGGCCTAGTAATGTGCTGACTTTGATCTGTGC
ATGGGTTCTGCGTCTTCAGCCCTGAGCCTGGGAGATCAGAGGCCATCTTCACACTAGAAGACTGCTGCATCTATGAACAGCTGCTTCTGGAAGTTTCTGTGTGTGTACGCGTGTATGTTTGGTTTTAT
TTTTTTAATTATTATTTTGTTTATAAATGCGTTTGAATGCACATGTTTCATGGTCATTGCAGTGTGGCTGGCATGTACGCTTAGGTCTTGTGTTGCTTGGTGTGTCAGCCCTACAGAGTTTCTGGAAA
GACTGATTTGAACACACAGTTCCCAGAGCATTGACATGTT

hide sequence

RefSeq Acc Id:

XM_039079406 ⟹ XP_038935334

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,115,865 - 10,132,643 (-)	NCBI
mRatBN7.2	7	9,465,180 - 9,481,987 (-)	NCBI

RefSeq Acc Id:

XM_063263746 ⟹ XP_063119816

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,115,865 - 10,132,597 (-)	NCBI


Protein RefSeqs	NP_001102206	(Get FASTA)	NCBI Sequence Viewer
	XP_006241035	(Get FASTA)	NCBI Sequence Viewer
	XP_006241036	(Get FASTA)	NCBI Sequence Viewer
	XP_006241037	(Get FASTA)	NCBI Sequence Viewer
	XP_038935334	(Get FASTA)	NCBI Sequence Viewer
	XP_063119816	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI60828	(Get FASTA)	NCBI Sequence Viewer
	B1H224	(Get FASTA)	NCBI Sequence Viewer
	EDL89310	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000057438

RefSeq Acc Id:

NP_001102206 ⟸ NM_001108736

- UniProtKB:

A0A8L2QRY6 (UniProtKB/TrEMBL), A0A8I5ZQH5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTDAKYVLCRWEKRLWPAKVLARTETSAKNKRKKEFFLDVQILSLKEKIQVKSSAVEALQKSHIENIAAFLASQNEVPATPLEELTYRRSLRVALDVLNERTSLSPESHPVENGSTPSQKGKPDADMA
SQVSSAPSPSFLSEDDQAVAAQCASKRRWECSPKSLSPLSASEEDLRCKVDPKTGLSESGALGTEVPAPTGDESQNGSGSQLDHGQESTTKKRQRNSGEKPARRGKAESGLSKGDSVAESGGQASSCV
ALASPRLPSQTWEGDPCAGVEGCDPVESSGNIRPLLDSERSKGRLTKRPRLDGGRNPLPRHLGTRTVGAVPSRRSCSGEVTTLRRAGDSDRPEEDPMSSEESTGFKSVHSLLEEEEEEEEEEEEEEEP
PRILLYHEPRSFEVGMLVWLKYQKYPFWPAVVKSVRRRDKKASVLFIEGNMNPKGRGITVSLRRLKHFDCKEKHALLDRAKEDFAQAIGWCVSLITDYRVRLGCGSFAGSFLEYYAADISYPVRKSIQ
QDVLGTRFPQLGKGDPEEPMGDSRLGQWRPCRKVLPDRSRAARDKANQKLVEYIVKAKGAESHLRAILHSRKPSRWLKTFLSSNQYVTCMETYLEDEAQLDEVVEYLQGVCRDMDGEMPARGSGDRIR
FILDVLLPEAIICAISAVEAVDYKTAEQKYLRGPTLSYREKEIFDNELLEERNRRRR

hide sequence

RefSeq Acc Id:	XP_006241035 ⟸ XM_006240973
- Peptide Label:	isoform X1
- UniProtKB:	B1H224 (UniProtKB/Swiss-Prot), A0A8I5ZQH5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTDAKYVLCRWEKRLWPAKVLARTETSAKNKRKKEFFLDVQILSLKEKIQVKSSAVEALQKSHI ENIAAFLASQNEVPATPLEELTYRRSLRVALDVLNERTSLSPESHPVENGSTPSQKGKPDADMASQVSSAPSPSFLSEDDQAVAAQCASKRRWECSPKSLSPLSASEEDLRCKVDPKTGLSESGALGT EVPAPTGDESQNGSGSQLDHGQESTTKKRQRNSGEKPARRGKAESGLSKGDSVAESGGQASSCVALASPRLPSQTWEGDPCAGVEGCDPVESSGNIRPLLDSERSKGRLTKRPRLDGGRNPLPRHLGT RTVGAVPSRRSCSGEVTTLRRAGDSDRPEEADPMSSEESTGFKSVHSLLEEEEEEEEEEEEEEEPPRILLYHEPRSFEVGMLVWLKYQKYPFWPAVVKSVRRRDKKASVLFIEGNMNPKGRGITVSLR RLKHFDCKEKHALLDRAKEDFAQAIGWCVSLITDYRVRLGCGSFAGSFLEYYAADISYPVRKSIQQDVLGTRFPQLGKGDPEEPMGDSRLGQWRPCRKVLPDRSRAARDKANQKLVEYIVKAKGAESH LRAILHSRKPSRWLKTFLSSNQYVTCMETYLEDEAQLDEVVEYLQGVCRDMDGEMPARGSGDRIRFILDVLLPEAIICAISAVEAVDYKTAEQKYLRGPTLSYREKEIFDNELLEERNRRRR hide sequence

RefSeq Acc Id:	XP_006241036 ⟸ XM_006240974
- Peptide Label:	isoform X1
- UniProtKB:	B1H224 (UniProtKB/Swiss-Prot), A0A8I5ZQH5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTDAKYVLCRWEKRLWPAKVLARTETSAKNKRKKEFFLDVQILSLKEKIQVKSSAVEALQKSHIENIAAFLASQNEVPATPLEELTYRRSLRVALDVLNERTSLSPESHPVENGSTPSQKGKPDADMA SQVSSAPSPSFLSEDDQAVAAQCASKRRWECSPKSLSPLSASEEDLRCKVDPKTGLSESGALGTEVPAPTGDESQNGSGSQLDHGQESTTKKRQRNSGEKPARRGKAESGLSKGDSVAESGGQASSCV ALASPRLPSQTWEGDPCAGVEGCDPVESSGNIRPLLDSERSKGRLTKRPRLDGGRNPLPRHLGTRTVGAVPSRRSCSGEVTTLRRAGDSDRPEEADPMSSEESTGFKSVHSLLEEEEEEEEEEEEEEE PPRILLYHEPRSFEVGMLVWLKYQKYPFWPAVVKSVRRRDKKASVLFIEGNMNPKGRGITVSLRRLKHFDCKEKHALLDRAKEDFAQAIGWCVSLITDYRVRLGCGSFAGSFLEYYAADISYPVRKSI QQDVLGTRFPQLGKGDPEEPMGDSRLGQWRPCRKVLPDRSRAARDKANQKLVEYIVKAKGAESHLRAILHSRKPSRWLKTFLSSNQYVTCMETYLEDEAQLDEVVEYLQGVCRDMDGEMPARGSGDRI RFILDVLLPEAIICAISAVEAVDYKTAEQKYLRGPTLSYREKEIFDNELLEERNRRRR hide sequence

RefSeq Acc Id:	XP_006241037 ⟸ XM_006240975
- Peptide Label:	isoform X1
- UniProtKB:	B1H224 (UniProtKB/Swiss-Prot), A0A8I5ZQH5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTDAKYVLCRWEKRLWPAKVLARTETSAKNKRKKEFFLDVQILSLKEKIQVKSSAVEALQKSHI ENIAAFLASQNEVPATPLEELTYRRSLRVALDVLNERTSLSPESHPVENGSTPSQKGKPDADMASQVSSAPSPSFLSEDDQAVAAQCASKRRWECSPKSLSPLSASEEDLRCKVDPKTGLSESGALGT EVPAPTGDESQNGSGSQLDHGQESTTKKRQRNSGEKPARRGKAESGLSKGDSVAESGGQASSCVALASPRLPSQTWEGDPCAGVEGCDPVESSGNIRPLLDSERSKGRLTKRPRLDGGRNPLPRHLGT RTVGAVPSRRSCSGEVTTLRRAGDSDRPEEADPMSSEESTGFKSVHSLLEEEEEEEEEEEEEEEPPRILLYHEPRSFEVGMLVWLKYQKYPFWPAVVKSVRRRDKKASVLFIEGNMNPKGRGITVSLR RLKHFDCKEKHALLDRAKEDFAQAIGWCVSLITDYRVRLGCGSFAGSFLEYYAADISYPVRKSIQQDVLGTRFPQLGKGDPEEPMGDSRLGQWRPCRKVLPDRSRAARDKANQKLVEYIVKAKGAESH LRAILHSRKPSRWLKTFLSSNQYVTCMETYLEDEAQLDEVVEYLQGVCRDMDGEMPARGSGDRIRFILDVLLPEAIICAISAVEAVDYKTAEQKYLRGPTLSYREKEIFDNELLEERNRRRR hide sequence

Ensembl Acc Id:

ENSRNOP00000057438 ⟸ ENSRNOT00000060708

Protein Domains

MUM1-like PWWP PWWP

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B1H224-F1-model_v2	AlphaFold	B1H224	1-698	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-34923	BioCyc
Ensembl Genes	ENSRNOG00000024549	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000060708	ENTREZGENE
Gene3D-CATH	2.30.30.140	UniProtKB/Swiss-Prot
	6.10.300.20	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7453186	IMAGE-MGC_LOAD
InterPro	MUM1-like_PWWP	UniProtKB/Swiss-Prot
	PWP3A/B	UniProtKB/Swiss-Prot
	PWP3A_3B_4_C	UniProtKB/Swiss-Prot
	PWP3A_3B_4_N	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:187518	IMAGE-MGC_LOAD
NCBI Gene	362838	ENTREZGENE
PANTHER	PTHR31333	UniProtKB/Swiss-Prot
	PTHR31333:SF4	UniProtKB/Swiss-Prot
Pfam	MUM1-like_PWWP	UniProtKB/Swiss-Prot
	PWP3A-B_C	UniProtKB/Swiss-Prot
	PWP3A-B_N	UniProtKB/Swiss-Prot
PhenoGen	Pwwp3a	PhenoGen
RatGTEx	ENSRNOG00000024549	RatGTEx
Superfamily-SCOP	Tudor/PWWP/MBT	UniProtKB/Swiss-Prot
UniProt	A0A8I5ZQH5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QRY6	ENTREZGENE, UniProtKB/TrEMBL
	B1H224	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-11-02	Pwwp3a	PWWP domain containing 3A, DNA repair factor	Mum1	melanoma associated antigen (mutated) 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Mum1	melanoma associated antigen (mutated) 1	Mum1_predicted	melanoma associated antigen (mutated) 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Mum1_predicted	melanoma associated antigen (mutated) 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar

RGD Manual Annotations