Kifc3 (kinesin family member C3) - Rat Genome Database

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Gene: Kifc3 (kinesin family member C3) Rattus norvegicus
Analyze
Symbol: Kifc3
Name: kinesin family member C3
RGD ID: 1307693
Description: Predicted to enable identical protein binding activity and microtubule binding activity. Predicted to be involved in epithelial cell-cell adhesion; microtubule-based process; and zonula adherens maintenance. Predicted to act upstream of or within Golgi organization. Predicted to be located in several cellular components, including Golgi apparatus; centrosome; and zonula adherens. Predicted to be part of kinesin complex. Predicted to be active in microtubule cytoskeleton. Orthologous to human KIFC3 (kinesin family member C3); PARTICIPATES IN E-cadherin signaling pathway; INTERACTS WITH 17beta-estradiol; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: kinesin-like protein KIFC3; KRP4; LOC307644; MGC156699
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8199,831,159 - 9,926,405 (+)NCBIGRCr8
mRatBN7.2199,825,114 - 9,920,371 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl199,886,693 - 9,920,451 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx199,788,799 - 9,884,111 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,555,624 - 10,650,952 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0199,842,003 - 9,937,790 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01910,305,405 - 10,339,186 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,320,604 - 10,339,178 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01910,226,739 - 10,319,289 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,335,789 - 10,354,364 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11910,325,554 - 10,359,187 (+)NCBI
Celera199,789,874 - 9,808,283 (+)NCBICelera
Cytogenetic Map19p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kifc3RatBardet-Biedl syndrome  ISOKIFC3 (Homo sapiens)8554872ClinVar Annotator: match by term: Bardet-Biedl syndromeClinVarPMID:11285252 more ...
Kifc3RatChromosome 16q12 Duplication Syndrome  ISOKIFC3 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 16q12 duplication syndromeClinVarPMID:25741868
Kifc3Ratdevelopmental and epileptic encephalopathy  ISOKIFC3 (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathyClinVarPMID:11285252 more ...
Kifc3Ratearly infantile epileptic encephalopathy  ISOKIFC3 (Homo sapiens)8554872ClinVar Annotator: match by term: Early infantile epileptic encephalopathyClinVarPMID:11285252 more ...

1 to 20 of 85 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kifc3Rat1,2-dimethylhydrazine affects expressionISOKifc3 (Mus musculus)64804641 and 2-Dimethylhydrazine affects the expression of KIFC3 mRNACTDPMID:22206623
Kifc3Rat17alpha-ethynylestradiol multiple interactionsISOKifc3 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of KIFC3 mRNACTDPMID:17942748
Kifc3Rat17alpha-ethynylestradiol increases expressionISOKifc3 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of KIFC3 mRNACTDPMID:17942748
Kifc3Rat17beta-estradiol multiple interactionsISOKIFC3 (Homo sapiens)6480464[Estradiol co-treated with TGFB1 protein] results in increased expression of KIFC3 mRNACTDPMID:30165855
Kifc3Rat17beta-estradiol decreases expressionISOKIFC3 (Homo sapiens)6480464Estradiol results in decreased expression of KIFC3 mRNACTDPMID:31614463
Kifc3Rat17beta-estradiol increases expressionISOKifc3 (Mus musculus)6480464Estradiol results in increased expression of KIFC3 mRNACTDPMID:39298647
Kifc3Rat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of KIFC3 mRNACTDPMID:32145629
Kifc3Rat2,2',4,4'-Tetrabromodiphenyl ether affects expressionISOKifc3 (Mus musculus)64804642 more ...CTDPMID:30294300
Kifc3Rat2,2',5,5'-tetrachlorobiphenyl increases expressionEXP 64804642 more ...CTDPMID:23829299
Kifc3Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOKifc3 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of KIFC3 mRNACTDPMID:17942748
Kifc3Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of KIFC3 mRNACTDPMID:33387578
Kifc3Rat2,3,7,8-Tetrachlorodibenzofuran decreases expressionEXP 64804642 more ...CTDPMID:32109520
Kifc3Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOKifc3 (Mus musculus)64804642 more ...CTDPMID:38648751
Kifc3Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of KIFC3 mRNACTDPMID:21346803
Kifc3Rat2-hydroxypropanoic acid decreases expressionISOKIFC3 (Homo sapiens)6480464Lactic Acid results in decreased expression of KIFC3 mRNACTDPMID:30851411
Kifc3Rat3,4-methylenedioxymethamphetamine increases expressionISOKifc3 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of KIFC3 mRNACTDPMID:20188158
Kifc3Rat4,4'-sulfonyldiphenol affects expressionISOKifc3 (Mus musculus)6480464bisphenol S affects the expression of KIFC3 mRNACTDPMID:39298647
Kifc3Rat4,4'-sulfonyldiphenol affects methylationISOKifc3 (Mus musculus)6480464bisphenol S affects the methylation of KIFC3 geneCTDPMID:31683443
Kifc3Rat4,4'-sulfonyldiphenol increases methylationISOKifc3 (Mus musculus)6480464bisphenol S results in increased methylation of KIFC3 exonCTDPMID:33297965
Kifc3Rat4-hydroxyphenyl retinamide increases expressionISOKifc3 (Mus musculus)6480464Fenretinide results in increased expression of KIFC3 mRNACTDPMID:28973697

1 to 20 of 85 rows

Biological Process
1 to 10 of 10 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kifc3Ratepithelial cell-cell adhesion involved_inISOKIFC3 (Homo sapiens)1624291 PMID:19041755RGDPMID:19041755
Kifc3Ratepithelial cell-cell adhesion involved_inIEAUniProtKB:Q9BVG8 and ensembl:ENSP000004016961600115GO_REF:0000107EnsemblGO_REF:0000107
Kifc3RatGolgi organization acts_upstream_of_or_withinISOKifc3 (Mus musculus)1624291 PMID:12135985RGDPMID:12135985
Kifc3RatGolgi organization acts_upstream_of_or_withinIEAUniProtKB:O35231 and ensembl:ENSMUSP000000342401600115GO_REF:0000107EnsemblGO_REF:0000107
Kifc3Ratmicrotubule-based movement involved_inIEAInterPro:IPR001752 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Kifc3Ratmicrotubule-based process involved_inIBAMGI:109202 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Kifc3Ratmicrotubule-based process acts_upstream_of_or_withinISOKifc3 (Mus musculus)1624291 PMID:12135985RGDPMID:12135985
Kifc3Ratmicrotubule-based process acts_upstream_of_or_withinIEAUniProtKB:O35231 and ensembl:ENSMUSP000000342401600115GO_REF:0000107EnsemblGO_REF:0000107
Kifc3Ratzonula adherens maintenance involved_inISOKIFC3 (Homo sapiens)1624291 PMID:19041755RGDPMID:19041755
Kifc3Ratzonula adherens maintenance involved_inIEAUniProtKB:Q9BVG8 and ensembl:ENSP000004016961600115GO_REF:0000107EnsemblGO_REF:0000107
1 to 10 of 10 rows

Cellular Component
1 to 13 of 13 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kifc3Ratcentrosome located_inISOKIFC3 (Homo sapiens)1624291 PMID:19041755RGDPMID:19041755
Kifc3Ratcentrosome located_inIEAUniProtKB:Q9BVG8 and ensembl:ENSP000004016961600115GO_REF:0000107EnsemblGO_REF:0000107
Kifc3Ratcytoskeleton located_inIEAUniProtKB-SubCell:SL-00901600115GO_REF:0000044UniProtGO_REF:0000044
Kifc3Ratcytoskeleton located_inIEAUniProtKB-KW:KW-02061600115GO_REF:0000043UniProtGO_REF:0000043
Kifc3RatGolgi apparatus located_inISOKifc3 (Mus musculus)1624291 PMID:12135985RGDPMID:12135985
Kifc3RatGolgi apparatus located_inIEAUniProtKB:O35231 and ensembl:ENSMUSP000000342401600115GO_REF:0000107EnsemblGO_REF:0000107
Kifc3Ratkinesin complex part_ofISOKifc3 (Mus musculus)1624291 PMID:12135985RGDPMID:12135985
Kifc3Ratkinesin complex part_ofIEAUniProtKB:O35231 and ensembl:ENSMUSP000000342401600115GO_REF:0000107EnsemblGO_REF:0000107
Kifc3Ratmicrotubule located_inIEAUniProtKB-KW:KW-04931600115GO_REF:0000043UniProtGO_REF:0000043
Kifc3Ratmicrotubule cytoskeleton is_active_inIBAMGI:109202 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Kifc3Ratmitochondrion located_inISOKIFC3 (Homo sapiens)9068941 PMID:34800366FlyBasePMID:34800366
Kifc3Ratzonula adherens located_inISOKIFC3 (Homo sapiens)1624291 PMID:19041755RGDPMID:19041755
Kifc3Ratzonula adherens located_inIEAUniProtKB:Q9BVG8 and ensembl:ENSP000004016961600115GO_REF:0000107EnsemblGO_REF:0000107
1 to 13 of 13 rows

Molecular Function
1 to 13 of 13 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kifc3RatATP binding enablesIEAUniRule:UR0004010071600115GO_REF:0000104UniProtGO_REF:0000104
Kifc3RatATP binding enablesIEAInterPro:IPR001752 and InterPro:IPR0198211600115GO_REF:0000002InterProGO_REF:0000002
Kifc3RatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
Kifc3Ratcytoskeletal motor activity enablesIEAUniRule:UR0004010071600115GO_REF:0000104UniProtGO_REF:0000104
Kifc3Ratidentical protein binding enablesISOKIFC3 (Homo sapiens) and UniProtKB:Q9BVG8-51624291UniProtKB:Q9BVG8-5 and PMID:32296183RGDPMID:32296183
Kifc3Ratmicrotubule binding enablesIEAInterPro:IPR0017521600115GO_REF:0000002InterProGO_REF:0000002
Kifc3Ratmicrotubule binding enablesIBAPANTHER:PTN001947889 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Kifc3Ratmicrotubule motor activity enablesIEAInterPro:IPR001752 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Kifc3Ratnucleotide binding enablesIEAUniRule:UR0004010071600115GO_REF:0000104UniProtGO_REF:0000104
Kifc3Ratnucleotide binding enablesIEAUniProtKB-KW:KW-05471600115GO_REF:0000043UniProtGO_REF:0000043
Kifc3Ratprotein binding enablesISOKifc3 (Mus musculus)1624291UniProtKB:Q9WTX8 and PMID:36357673RGDPMID:36357673
Kifc3Ratprotein binding enablesISOKIFC3 (Homo sapiens) and UniProtKB:Q9BVG8-51624291UniProtKB:A0A0S2Z5X4 more ...RGDPMID:26871637 more ...
Kifc3Ratprotein binding enablesISOKIFC3 (Homo sapiens)1624291UniProtKB:I6L9F6 more ...RGDPMID:20360068 more ...
1 to 13 of 13 rows

Imported Annotations - PID (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kifc3RatE-cadherin signaling pathway  ISOKIFC3 (Homo sapiens)6484113 PIDPID:200182

#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8688559   PMID:12135985   PMID:12477932   PMID:19041755   PMID:19056867   PMID:34800366  



Kifc3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8199,831,159 - 9,926,405 (+)NCBIGRCr8
mRatBN7.2199,825,114 - 9,920,371 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl199,886,693 - 9,920,451 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx199,788,799 - 9,884,111 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,555,624 - 10,650,952 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0199,842,003 - 9,937,790 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01910,305,405 - 10,339,186 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,320,604 - 10,339,178 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01910,226,739 - 10,319,289 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,335,789 - 10,354,364 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11910,325,554 - 10,359,187 (+)NCBI
Celera199,789,874 - 9,808,283 (+)NCBICelera
Cytogenetic Map19p13NCBI
KIFC3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381657,758,217 - 57,862,858 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1657,758,217 - 57,863,053 (-)EnsemblGRCh38hg38GRCh38
GRCh371657,792,129 - 57,837,165 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361656,349,630 - 56,393,940 (-)NCBINCBI36Build 36hg18NCBI36
Build 341656,349,631 - 56,393,909NCBI
Celera1642,289,388 - 42,333,720 (-)NCBICelera
Cytogenetic Map16q21NCBI
HuRef1643,659,003 - 43,703,719 (-)NCBIHuRef
CHM1_11659,198,854 - 59,243,165 (-)NCBICHM1_1
T2T-CHM13v2.01663,553,374 - 63,658,232 (-)NCBIT2T-CHM13v2.0
Kifc3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39895,826,456 - 95,929,454 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl895,826,456 - 95,929,440 (-)EnsemblGRCm39 Ensembl
GRCm38895,099,828 - 95,202,826 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl895,099,828 - 95,202,812 (-)EnsemblGRCm38mm10GRCm38
MGSCv37897,623,728 - 97,666,440 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36897,988,957 - 98,031,669 (-)NCBIMGSCv36mm8
Celera899,425,882 - 99,457,735 (-)NCBICelera
Cytogenetic Map8C5NCBI
cM Map847.12NCBI
Kifc3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543315,366,106 - 15,428,660 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543315,365,944 - 15,428,502 (-)NCBIChiLan1.0ChiLan1.0
KIFC3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21867,229,222 - 67,274,283 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11673,150,139 - 73,194,887 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01638,034,983 - 38,080,022 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11657,166,395 - 57,254,899 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1657,166,395 - 57,254,899 (-)Ensemblpanpan1.1panPan2
KIFC3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1258,700,195 - 58,734,012 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl258,663,797 - 58,733,697 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha255,325,755 - 55,363,783 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0259,234,583 - 59,272,364 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl259,204,242 - 59,272,359 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1256,066,227 - 56,104,092 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0257,073,706 - 57,111,574 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0257,966,764 - 58,004,895 (+)NCBIUU_Cfam_GSD_1.0
Kifc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934949,795,650 - 49,830,571 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364759,757,147 - 9,831,563 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364759,758,503 - 9,821,629 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIFC3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl619,659,616 - 19,696,073 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1619,659,987 - 19,696,104 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2617,719,961 - 17,750,864 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIFC3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1543,689,079 - 43,735,014 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl543,687,613 - 43,730,268 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604732,384,822 - 32,490,502 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kifc3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474628,330,539 - 28,359,649 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474628,302,673 - 28,359,649 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Kifc3
971 total Variants

Predicted Target Of
Summary Value
Count of predictions:93
Count of miRNA genes:66
Interacting mature miRNAs:84
Transcripts:ENSRNOT00000066032
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 17 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat

1 to 10 of 17 rows
AI325457  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2199,920,191 - 9,920,287 (+)MAPPERmRatBN7.2
Rnor_6.01910,339,004 - 10,339,099NCBIRnor6.0
Rnor_5.01910,319,107 - 10,319,202UniSTSRnor5.0
RGSC_v3.41910,354,185 - 10,354,280UniSTSRGSC3.4
Celera199,808,104 - 9,808,199UniSTS
Cytogenetic Map19p13UniSTS
RH130442  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2199,920,087 - 9,920,290 (+)MAPPERmRatBN7.2
Rnor_6.01910,338,900 - 10,339,102NCBIRnor6.0
Rnor_5.01910,319,003 - 10,319,205UniSTSRnor5.0
RGSC_v3.41910,354,081 - 10,354,283UniSTSRGSC3.4
Celera199,808,000 - 9,808,202UniSTS
RH 3.4 Map1972.41UniSTS
Cytogenetic Map19p13UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 26 of 26 rows
RefSeq Transcripts NM_001103352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008772293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005496646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005496647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC106681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF035953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AM180764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC128748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 26 of 26 rows

Ensembl Acc Id: ENSRNOT00000066032   ⟹   ENSRNOP00000058969
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl199,886,693 - 9,920,361 (+)Ensembl
Rnor_6.0 Ensembl1910,320,604 - 10,339,178 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093890   ⟹   ENSRNOP00000085654
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl199,906,144 - 9,920,370 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000095742   ⟹   ENSRNOP00000092397
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl199,886,693 - 9,920,361 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000104498   ⟹   ENSRNOP00000080196
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl199,886,705 - 9,920,451 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000107028   ⟹   ENSRNOP00000094247
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl199,908,334 - 9,920,451 (+)Ensembl
RefSeq Acc Id: NM_001103352   ⟹   NP_001096822
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,907,826 - 9,926,405 (+)NCBI
mRatBN7.2199,901,787 - 9,920,371 (+)NCBI
Rnor_6.01910,320,604 - 10,339,183 (+)NCBI
Rnor_5.01910,226,739 - 10,319,289 (+)NCBI
RGSC_v3.41910,335,789 - 10,354,364 (+)RGD
Celera199,789,874 - 9,808,283 (+)RGD
Sequence:
RefSeq Acc Id: NM_001401191   ⟹   NP_001388120
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,159 - 9,926,405 (+)NCBI
mRatBN7.2199,825,114 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_008772292   ⟹   XP_008770514
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,907,654 - 9,926,405 (+)NCBI
mRatBN7.2199,901,658 - 9,920,371 (+)NCBI
Rnor_6.01910,320,541 - 10,338,325 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008772293   ⟹   XP_008770515
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,914,619 - 9,926,405 (+)NCBI
mRatBN7.2199,908,496 - 9,920,371 (+)NCBI
Rnor_6.01910,327,255 - 10,338,325 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601265   ⟹   XP_017456754
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
Rnor_6.01910,309,817 - 10,338,325 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601266   ⟹   XP_017456755
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,925,929 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
Rnor_6.01910,309,817 - 10,339,186 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601269   ⟹   XP_017456758
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,925,929 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
Rnor_6.01910,309,817 - 10,339,183 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601270   ⟹   XP_017456759
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
Rnor_6.01910,309,817 - 10,339,186 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039097698   ⟹   XP_038953626
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_039097699   ⟹   XP_038953627
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_039097700   ⟹   XP_038953628
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,897,451 - 9,926,405 (+)NCBI
mRatBN7.2199,891,414 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_039097701   ⟹   XP_038953629
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,892,727 - 9,926,405 (+)NCBI
mRatBN7.2199,891,254 - 9,920,371 (+)NCBI
RefSeq Acc Id: XM_063277982   ⟹   XP_063134052
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,926,405 (+)NCBI
RefSeq Acc Id: XM_063277983   ⟹   XP_063134053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,897,451 - 9,926,405 (+)NCBI
RefSeq Acc Id: XM_063277984   ⟹   XP_063134054
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,914,619 - 9,926,405 (+)NCBI
RefSeq Acc Id: XR_005496646
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,925,929 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
RefSeq Acc Id: XR_005496647
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8199,831,253 - 9,925,929 (+)NCBI
mRatBN7.2199,825,208 - 9,920,371 (+)NCBI
1 to 5 of 20 rows
1 to 5 of 20 rows
RefSeq Acc Id: NP_001096822   ⟸   NM_001103352
- Peptide Label: isoform 2
- UniProtKB: A1A5P4 (UniProtKB/TrEMBL),   A0A8I6A4I8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770514   ⟸   XM_008772292
- Peptide Label: isoform X9
- UniProtKB: A0A8I6AKJ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770515   ⟸   XM_008772293
- Peptide Label: isoform X10
- UniProtKB: A0A8I6AKJ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456755   ⟸   XM_017601266
- Peptide Label: isoform X3
- UniProtKB: A0A8I6ADV7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456759   ⟸   XM_017601270
- Peptide Label: isoform X7
- UniProtKB: F7EXA8 (UniProtKB/TrEMBL)
- Sequence:
Kinesin motor

Name Modeler Protein Id AA Range Protein Structure
AF-A1A5P4-F1-model_v2 AlphaFold A1A5P4 1-753 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 38 of 38 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-6525 BioCyc
Ensembl Genes ENSRNOG00000014087 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000066032.3 UniProtKB/TrEMBL
  ENSRNOT00000093890 ENTREZGENE
  ENSRNOT00000093890.1 UniProtKB/TrEMBL
  ENSRNOT00000095742 ENTREZGENE
  ENSRNOT00000095742.1 UniProtKB/TrEMBL
  ENSRNOT00000104498 ENTREZGENE
  ENSRNOT00000104498.1 UniProtKB/TrEMBL
  ENSRNOT00000107028 ENTREZGENE
  ENSRNOT00000107028.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.1490 UniProtKB/TrEMBL
  3.40.850.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7099524 IMAGE-MGC_LOAD
InterPro Kinesin-like_fam UniProtKB/TrEMBL
  Kinesin_motor_CS UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
MGC_CLONE MGC:156699 IMAGE-MGC_LOAD
NCBI Gene 307644 ENTREZGENE
PANTHER KINESIN-LIKE PROTEIN KLP-3 UniProtKB/TrEMBL
  PTHR47972:SF5 UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/TrEMBL
PhenoGen Kifc3 PhenoGen
PRINTS KINESINHEAVY UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_DOMAIN1 UniProtKB/TrEMBL
  KINESIN_MOTOR_DOMAIN2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000014087 RatGTEx
SMART KISc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8I5ZSI9_RAT UniProtKB/TrEMBL
  A0A8I6A4I8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ADV7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AKJ1 ENTREZGENE, UniProtKB/TrEMBL
  A1A5P4 ENTREZGENE, UniProtKB/TrEMBL
  F7EXA8 ENTREZGENE, UniProtKB/TrEMBL
  Q2P9S2_RAT UniProtKB/TrEMBL
1 to 38 of 38 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Kifc3  kinesin family member C3  Kifc3_predicted  kinesin family member C3 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Kifc3_predicted  kinesin family member C3 (predicted)      Symbol and Name status set to approved 70820 APPROVED