Dolpp1 (dolichyldiphosphatase 1) - Rat Genome Database

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Gene: Dolpp1 (dolichyldiphosphatase 1) Rattus norvegicus
Analyze
Symbol: Dolpp1
Name: dolichyldiphosphatase 1
RGD ID: 1307447
Description: Predicted to enable dolichyldiphosphatase activity. Predicted to be involved in protein N-linked glycosylation. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human DOLPP1 (dolichyldiphosphatase 1); PARTICIPATES IN N-linked glycan biosynthetic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: dolichyl pyrophosphate phosphatase 1; LOC296624
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8334,063,825 - 34,072,133 (+)NCBIGRCr8
mRatBN7.2313,666,000 - 13,674,312 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl313,665,823 - 13,674,311 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx316,737,534 - 16,745,846 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0325,322,496 - 25,330,808 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0323,568,489 - 23,576,787 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.038,957,103 - 8,966,618 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl38,958,090 - 8,966,617 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0314,309,876 - 14,319,392 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.439,437,729 - 9,446,213 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.139,438,028 - 9,445,751 (+)NCBI
Celera38,432,373 - 8,440,857 (+)NCBICelera
Cytogenetic Map3p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dolpp1Ratdevelopmental and epileptic encephalopathy  ISORGD:13166438554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathyClinVarPMID:28492532
Dolpp1Ratdystonia  ISORGD:13166438554872ClinVar Annotator: match by term: Dystonic disorderClinVarPMID:28492532
Dolpp1Ratearly infantile epileptic encephalopathy  ISORGD:13166438554872ClinVar Annotator: match by term: Early infantile epileptic encephalopathyClinVarPMID:28492532
Dolpp1Ratprimary coenzyme Q10 deficiency 7  ISORGD:13166438554872ClinVar Annotator: match by term: Neonatal encephalomyopathy-cardiomyopathy-respiratory distress syndromeClinVarPMID:28492532

1 to 20 of 51 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dolpp1Rat1,2-dimethylhydrazine multiple interactionsISORGD:13166446480464[1,2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of DOLPP1 mRNACTDPMID:22206623
Dolpp1Rat17alpha-ethynylestradiol affects expressionISORGD:13166446480464Ethinyl Estradiol affects the expression of DOLPP1 mRNACTDPMID:17555576
Dolpp1Rat17alpha-ethynylestradiol increases expressionISORGD:13166446480464Ethinyl Estradiol results in increased expression of DOLPP1 mRNACTDPMID:17942748
Dolpp1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of DOLPP1 mRNACTDPMID:22298810
Dolpp1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of DOLPP1 mRNACTDPMID:33387578
Dolpp1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:13166446480464Tetrachlorodibenzodioxin affects the expression of DOLPP1 mRNACTDPMID:21570461
Dolpp1Rat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISORGD:13166436480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] more ...CTDPMID:28628672
Dolpp1Ratarsane affects methylationISORGD:13166436480464Arsenic affects the methylation of DOLPP1 geneCTDPMID:25304211
Dolpp1Ratarsane multiple interactionsISORGD:13166436480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
Dolpp1Ratarsenic atom affects methylationISORGD:13166436480464Arsenic affects the methylation of DOLPP1 geneCTDPMID:25304211
Dolpp1Ratarsenic atom multiple interactionsISORGD:13166436480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
Dolpp1Ratbenzo[a]pyrene decreases expressionISORGD:13166446480464Benzo(a)pyrene results in decreased expression of DOLPP1 mRNACTDPMID:22228805
Dolpp1Ratbenzo[a]pyrene increases methylationISORGD:13166436480464Benzo(a)pyrene results in increased methylation of DOLPP1 promoterCTDPMID:27901495
Dolpp1Ratbenzo[a]pyrene affects methylationISORGD:13166436480464Benzo(a)pyrene affects the methylation of DOLPP1 3' UTRCTDPMID:27901495
Dolpp1Ratbis(2-ethylhexyl) phthalate increases expressionISORGD:13166446480464Diethylhexyl Phthalate results in increased expression of DOLPP1 mRNACTDPMID:34319233
Dolpp1Ratbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of DOLPP1 mRNACTDPMID:25181051
Dolpp1Ratbisphenol F multiple interactionsISORGD:13166436480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] more ...CTDPMID:28628672
Dolpp1Ratcadmium dichloride increases methylationEXP 6480464Cadmium Chloride results in increased methylation of DOLPP1 promoterCTDPMID:22457795
Dolpp1Ratcholine multiple interactionsISORGD:13166446480464[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation more ...CTDPMID:20938992
Dolpp1Ratchrysene increases expressionISORGD:13166446480464chrysene results in increased expression of DOLPP1 mRNACTDPMID:26377693

1 to 20 of 51 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dolpp1Ratprotein glycosylation involved_inIEAUniPathway:UPA003781600115GO_REF:0000041UniProtGO_REF:0000041
Dolpp1Ratprotein N-linked glycosylation involved_inIBAMGI:1914093|PANTHER:PTN0008822901600115GO_REF:0000033GO_CentralGO_REF:0000033
Dolpp1Ratprotein N-linked glycosylation involved_inIEAUniRule:UR0014197841600115GO_REF:0000104UniProtGO_REF:0000104
Dolpp1Ratprotein N-linked glycosylation involved_inISORGD:13166441624291 PMID:12198133RGDPMID:12198133

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dolpp1Ratendoplasmic reticulum located_inIEAUniProtKB-KW:KW-02561600115GO_REF:0000043UniProtGO_REF:0000043
Dolpp1Ratendoplasmic reticulum membrane located_inISORGD:13166441624291 PMID:12198133RGDPMID:12198133
Dolpp1Ratendoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-00971600115GO_REF:0000044UniProtGO_REF:0000044
Dolpp1Ratendoplasmic reticulum membrane located_inIEAUniRule:UR0014197841600115GO_REF:0000104UniProtGO_REF:0000104
Dolpp1Ratendoplasmic reticulum membrane is_active_inIBAMGI:1914093|PANTHER:PTN0008822901600115GO_REF:0000033GO_CentralGO_REF:0000033
Dolpp1Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Dolpp1Ratmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dolpp1Ratdolichyldiphosphatase activity enablesISORGD:13166441624291 PMID:12198133RGDPMID:12198133
Dolpp1Ratdolichyldiphosphatase activity enablesIEAUniRule:UR0014197841600115GO_REF:0000104UniProtGO_REF:0000104
Dolpp1Ratdolichyldiphosphatase activity enablesIEAEC:3.6.1.431600115GO_REF:0000003UniProtGO_REF:0000003
Dolpp1Ratdolichyldiphosphatase activity enablesIBAMGI:1914093|PANTHER:PTN0008822901600115GO_REF:0000033GO_CentralGO_REF:0000033
Dolpp1Rathydrolase activity enablesIEAUniProtKB-KW:KW-03781600115GO_REF:0000043UniProtGO_REF:0000043

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dolpp1RatN-linked glycan biosynthetic pathway  IEA 6907045 KEGGrno:00510

#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12198133  



Dolpp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8334,063,825 - 34,072,133 (+)NCBIGRCr8
mRatBN7.2313,666,000 - 13,674,312 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl313,665,823 - 13,674,311 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx316,737,534 - 16,745,846 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0325,322,496 - 25,330,808 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0323,568,489 - 23,576,787 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.038,957,103 - 8,966,618 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl38,958,090 - 8,966,617 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0314,309,876 - 14,319,392 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.439,437,729 - 9,446,213 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.139,438,028 - 9,445,751 (+)NCBI
Celera38,432,373 - 8,440,857 (+)NCBICelera
Cytogenetic Map3p12NCBI
DOLPP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389129,081,111 - 129,090,438 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9129,081,111 - 129,090,438 (+)EnsemblGRCh38hg38GRCh38
GRCh379131,843,390 - 131,852,717 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369130,883,227 - 130,892,538 (+)NCBINCBI36Build 36hg18NCBI36
Build 349128,922,959 - 128,932,270NCBI
Celera9102,495,681 - 102,505,015 (+)NCBICelera
Cytogenetic Map9q34.11NCBI
HuRef9101,450,395 - 101,459,689 (+)NCBIHuRef
CHM1_19131,994,218 - 132,003,542 (+)NCBICHM1_1
T2T-CHM13v2.09141,284,575 - 141,293,902 (+)NCBIT2T-CHM13v2.0
Dolpp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39230,282,261 - 30,290,539 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl230,282,266 - 30,290,541 (+)EnsemblGRCm39 Ensembl
GRCm38230,392,254 - 30,400,529 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl230,392,254 - 30,400,529 (+)EnsemblGRCm38mm10GRCm38
MGSCv37230,247,936 - 30,256,047 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36230,214,425 - 30,222,536 (+)NCBIMGSCv36mm8
Celera230,097,323 - 30,105,432 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map221.68NCBI
Dolpp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555701,407,700 - 1,415,813 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555701,407,700 - 1,415,813 (+)NCBIChiLan1.0ChiLan1.0
DOLPP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21110,261,136 - 10,271,207 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1910,263,482 - 10,273,705 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09100,205,558 - 100,215,665 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19128,866,331 - 128,875,710 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9128,866,331 - 128,875,710 (+)Ensemblpanpan1.1panPan2
DOLPP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1954,584,510 - 54,593,688 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl954,585,996 - 54,593,648 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha953,780,102 - 53,789,320 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0955,480,130 - 55,489,511 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl955,480,135 - 55,489,401 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1954,266,785 - 54,276,000 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0954,578,674 - 54,587,888 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0954,672,389 - 54,681,603 (-)NCBIUU_Cfam_GSD_1.0
Dolpp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947196,744,083 - 196,752,926 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648716,512,168 - 16,522,329 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648716,512,153 - 16,522,043 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DOLPP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1269,374,933 - 269,384,344 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11269,374,707 - 269,383,939 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21303,390,902 - 303,400,136 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DOLPP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,076,492 - 9,086,731 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl129,076,411 - 9,084,258 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666096476,936 - 487,349 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dolpp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247606,015,299 - 6,023,283 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247606,015,484 - 6,023,293 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Dolpp1
45 total Variants

Predicted Target Of
Summary Value
Count of predictions:229
Count of miRNA genes:128
Interacting mature miRNAs:171
Transcripts:ENSRNOT00000064557
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 22 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1558647Cm46Cardiac mass QTL 465.40.0000055heart mass (VT:0007028)heart wet weight (CMO:0000069)31077882330356773Rat
1358357Srcrtb1Stress Responsive Cort Basal QTL 16.360.002blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)3865816227494778Rat
6893355Bw101Body weight QTL 1010.40.38body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
4889966Bss95Bone structure and strength QTL 954.4tibia area (VT:1000281)tibia-fibula cross-sectional area (CMO:0001718)3136847613Rat
1558654Bw56Body weight QTL 564.50.0000171body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
10401810Kidm53Kidney mass QTL 53kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3822719447233430Rat
1298526Arunc3Aerobic running capacity QTL 32.2exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)3822719433703538Rat
8693641Alc30Alcohol consumption QTL 3020.739drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)31043430624512004Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)31077882330356773Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)31086191289878372Rat

1 to 10 of 22 rows
RH134378  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2313,674,037 - 13,674,252 (+)MAPPERmRatBN7.2
Rnor_6.038,966,344 - 8,966,558NCBIRnor6.0
Rnor_5.0314,319,118 - 14,319,332UniSTSRnor5.0
RGSC_v3.439,445,940 - 9,446,154UniSTSRGSC3.4
Celera38,440,584 - 8,440,798UniSTS
RH 3.4 Map351.4UniSTS
Cytogenetic Map3p12UniSTS
REN36342  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2313,665,650 - 13,665,865 (+)MAPPERmRatBN7.2
Rnor_6.038,957,961 - 8,958,175NCBIRnor6.0
Rnor_5.0314,310,735 - 14,310,949UniSTSRnor5.0
RGSC_v3.439,437,557 - 9,437,771UniSTSRGSC3.4
Celera38,432,201 - 8,432,415UniSTS
Cytogenetic Map3p12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000064557   ⟹   ENSRNOP00000058902
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl313,665,823 - 13,674,311 (+)Ensembl
Rnor_6.0 Ensembl38,958,133 - 8,966,617 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000086789   ⟹   ENSRNOP00000069211
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl313,665,863 - 13,674,308 (+)Ensembl
Rnor_6.0 Ensembl38,958,090 - 8,965,454 (+)Ensembl
RefSeq Acc Id: NM_001106567   ⟹   NP_001100037
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8334,063,825 - 34,072,132 (+)NCBI
mRatBN7.2313,666,000 - 13,674,311 (+)NCBI
Rnor_6.038,958,133 - 8,966,617 (+)NCBI
Rnor_5.0314,309,876 - 14,319,392 (+)NCBI
RGSC_v3.439,437,729 - 9,446,213 (+)RGD
Celera38,432,373 - 8,440,857 (+)RGD
Sequence:
RefSeq Acc Id: NM_001399346   ⟹   NP_001386275
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8334,063,825 - 34,072,133 (+)NCBI
mRatBN7.2313,666,000 - 13,674,312 (+)NCBI
1 to 11 of 11 rows
Protein RefSeqs NP_001100037 (Get FASTA)   NCBI Sequence Viewer  
  NP_001386275 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL93310 (Get FASTA)   NCBI Sequence Viewer  
  EDL93311 (Get FASTA)   NCBI Sequence Viewer  
  EDL93312 (Get FASTA)   NCBI Sequence Viewer  
  EDL93313 (Get FASTA)   NCBI Sequence Viewer  
  EDL93314 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000058902
  ENSRNOP00000058902.1
  ENSRNOP00000069211
  ENSRNOP00000069211.2
1 to 11 of 11 rows
RefSeq Acc Id: NP_001100037   ⟸   NM_001106567
- Peptide Label: isoform 2
- UniProtKB: D3Z917 (UniProtKB/TrEMBL),   A6JTY4 (UniProtKB/TrEMBL),   A6JTY5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069211   ⟸   ENSRNOT00000086789
Ensembl Acc Id: ENSRNOP00000058902   ⟸   ENSRNOT00000064557
RefSeq Acc Id: NP_001386275   ⟸   NM_001399346
- Peptide Label: isoform 1
- UniProtKB: A0A0G2JUS5 (UniProtKB/TrEMBL),   A6JTY3 (UniProtKB/TrEMBL)
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JUS5-F1-model_v2 AlphaFold A0A0G2JUS5 1-238 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13691958
Promoter ID:EPDNEW_R2483
Type:multiple initiation site
Name:Dolpp1_1
Description:dolichyldiphosphatase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.038,958,320 - 8,958,380EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-50215 BioCyc
Ensembl Genes ENSRNOG00000017663 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000064557 ENTREZGENE
  ENSRNOT00000064557.2 UniProtKB/TrEMBL
  ENSRNOT00000086789 ENTREZGENE
  ENSRNOT00000086789.2 UniProtKB/TrEMBL
Gene3D-CATH Phosphatidic acid phosphatase type 2/haloperoxidase UniProtKB/TrEMBL
InterPro Dolichyldiphosphatase_PAP2 UniProtKB/TrEMBL
  P_Acid_Pase_2/haloperoxi_sf UniProtKB/TrEMBL
  P_Acid_Pase_2/haloperoxidase UniProtKB/TrEMBL
KEGG Report rno:296624 UniProtKB/TrEMBL
NCBI Gene 296624 ENTREZGENE
PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 UniProtKB/TrEMBL
  PTHR11247:SF1 UniProtKB/TrEMBL
Pfam PAP2 UniProtKB/TrEMBL
PhenoGen Dolpp1 PhenoGen
RatGTEx ENSRNOG00000017663 RatGTEx
SMART acidPPc UniProtKB/TrEMBL
Superfamily-SCOP AcPase_VanPerase UniProtKB/TrEMBL
UniProt A0A0G2JUS5 ENTREZGENE, UniProtKB/TrEMBL
  A6JTY3 ENTREZGENE, UniProtKB/TrEMBL
  A6JTY4 ENTREZGENE, UniProtKB/TrEMBL
  A6JTY5 ENTREZGENE, UniProtKB/TrEMBL
  A6JTY6_RAT UniProtKB/TrEMBL
  D3Z917 ENTREZGENE, UniProtKB/TrEMBL
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-06-05 Dolpp1  dolichyldiphosphatase 1  Dolpp1  dolichyl pyrophosphate phosphatase 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Dolpp1  dolichyl pyrophosphate phosphatase 1   Dolpp1_predicted  dolichyl pyrophosphate phosphatase 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Dolpp1_predicted  dolichyl pyrophosphate phosphatase 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED