DOLPP1 (dolichyldiphosphatase 1) - Rat Genome Database

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Gene: DOLPP1 (dolichyldiphosphatase 1) Chlorocebus sabaeus
Analyze
Symbol: DOLPP1
Name: dolichyldiphosphatase 1
RGD ID: 18499055
Description: ENCODES a protein that exhibits dolichyldiphosphatase activity (inferred); hydrolase activity (inferred); INVOLVED IN lipid biosynthetic process (inferred); protein glycosylation (inferred); protein N-linked glycosylation (inferred); ASSOCIATED WITH genetic disease (ortholog); primary coenzyme Q10 deficiency 7 (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); intracellular membrane-bounded organelle (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,076,492 - 9,086,731 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl129,076,411 - 9,084,258 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666096476,936 - 487,349 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
DOLPP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,076,492 - 9,086,731 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl129,076,411 - 9,084,258 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666096476,936 - 487,349 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
DOLPP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389129,081,111 - 129,090,438 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9129,081,111 - 129,090,438 (+)EnsemblGRCh38hg38GRCh38
GRCh379131,843,390 - 131,852,717 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369130,883,227 - 130,892,538 (+)NCBINCBI36Build 36hg18NCBI36
Build 349128,922,959 - 128,932,270NCBI
Celera9102,495,681 - 102,505,015 (+)NCBICelera
Cytogenetic Map9q34.11NCBI
HuRef9101,450,395 - 101,459,689 (+)NCBIHuRef
CHM1_19131,994,218 - 132,003,542 (+)NCBICHM1_1
T2T-CHM13v2.09141,284,575 - 141,293,902 (+)NCBIT2T-CHM13v2.0
Dolpp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39230,282,261 - 30,290,539 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl230,282,266 - 30,290,541 (+)EnsemblGRCm39 Ensembl
GRCm38230,392,254 - 30,400,529 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl230,392,254 - 30,400,529 (+)EnsemblGRCm38mm10GRCm38
MGSCv37230,247,936 - 30,256,047 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36230,214,425 - 30,222,536 (+)NCBIMGSCv36mm8
Celera230,097,323 - 30,105,432 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map221.68NCBI
Dolpp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8334,063,825 - 34,072,133 (+)NCBIGRCr8
mRatBN7.2313,666,000 - 13,674,312 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl313,665,823 - 13,674,311 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx316,737,534 - 16,745,846 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0325,322,496 - 25,330,808 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0323,568,489 - 23,576,787 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.038,957,103 - 8,966,618 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl38,958,090 - 8,966,617 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0314,309,876 - 14,319,392 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.439,437,729 - 9,446,213 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.139,438,028 - 9,445,751 (+)NCBI
Celera38,432,373 - 8,440,857 (+)NCBICelera
Cytogenetic Map3p12NCBI
Dolpp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555701,407,700 - 1,415,813 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555701,407,700 - 1,415,813 (+)NCBIChiLan1.0ChiLan1.0
DOLPP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21110,261,136 - 10,271,207 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1910,263,482 - 10,273,705 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09100,205,558 - 100,215,665 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19128,866,331 - 128,875,710 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9128,866,331 - 128,875,710 (+)Ensemblpanpan1.1panPan2
DOLPP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1954,584,510 - 54,593,688 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl954,585,996 - 54,593,648 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha953,780,102 - 53,789,320 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0955,480,130 - 55,489,511 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl955,480,135 - 55,489,401 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1954,266,785 - 54,276,000 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0954,578,674 - 54,587,888 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0954,672,389 - 54,681,603 (-)NCBIUU_Cfam_GSD_1.0
Dolpp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947196,744,083 - 196,752,926 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648716,512,168 - 16,522,329 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648716,512,153 - 16,522,043 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DOLPP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1269,374,933 - 269,384,344 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11269,374,707 - 269,383,939 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21303,390,902 - 303,400,136 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Dolpp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247606,015,299 - 6,023,283 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247606,015,484 - 6,023,293 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 23 28
Low 13 20 32
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSCSAT00000012618   ⟹   ENSCSAP00000010649
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl129,076,411 - 9,084,258 (-)Ensembl
RefSeq Acc Id: XM_008005988   ⟹   XP_008004179
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1129,076,492 - 9,086,726 (-)NCBI
Vero_WHO_p1.0NW_023666096476,936 - 487,349 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008005989   ⟹   XP_008004180
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1129,076,492 - 9,086,726 (-)NCBI
Vero_WHO_p1.0NW_023666096476,943 - 487,349 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008004179 (Get FASTA)   NCBI Sequence Viewer  
  XP_008004180 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000010649
  ENSCSAP00000010649.1
Reference Protein Sequences
RefSeq Acc Id: XP_008004180   ⟸   XM_008005989
- Peptide Label: isoform X2
RefSeq Acc Id: XP_008004179   ⟸   XM_008005988
- Peptide Label: isoform X1
RefSeq Acc Id: ENSCSAP00000010649   ⟸   ENSCSAT00000012618


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000014528 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000012618.1 UniProtKB/TrEMBL
Gene3D-CATH Phosphatidic acid phosphatase type 2/haloperoxidase UniProtKB/TrEMBL
InterPro Dolichyldiphosphatase_PAP2 UniProtKB/TrEMBL
  P_Acid_Pase_2/haloperoxi_sf UniProtKB/TrEMBL
  P_Acid_Pase_2/haloperoxidase UniProtKB/TrEMBL
NCBI Gene DOLPP1 ENTREZGENE
PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 UniProtKB/TrEMBL
  PTHR11247:SF1 UniProtKB/TrEMBL
Pfam PAP2 UniProtKB/TrEMBL
SMART acidPPc UniProtKB/TrEMBL
Superfamily-SCOP SSF48317 UniProtKB/TrEMBL
UniProt A0A0D9RPW0_CHLSB UniProtKB/TrEMBL