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Gene: Ddx21 (DExD-box helicase 21) Rattus norvegicus
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Symbol: Ddx21
Name: DExD-box helicase 21
Description: Predicted to have RNA binding activity; RNA helicase activity; and identical protein binding activity. Predicted to be involved in several processes, including positive regulation of I-kappaB kinase/NF-kappaB signaling; positive regulation of myeloid dendritic cell cytokine production; and response to exogenous dsRNA. Predicted to localize to the cytosol; nucleolus; and nucleoplasm. Orthologous to human DDX21 (DExD-box helicase 21); INTERACTS WITH (+)-schisandrin B; (RS)-amphetamine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Ddx21a; Ddx21b; DEAD (Asp-Glu-Ala-Asp) box helicase 21; DEAD (Asp-Glu-Ala-Asp) box polypeptide 21; DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a; DEAD (Asp-Glu-Ala-Asp) box polypeptide 21b; DEAD box protein 21; DEAD-box helicase 21; gu-alpha; LOC317399; LOC361847; MGC112658; MGC124980; nucleolar RNA helicase 2; nucleolar RNA helicase Gu; nucleolar RNA helicase II; RH II/Gu
Orthologs:
Homo sapiens (human) : DDX21 (DExD-box helicase 21)  HGNC  Alliance
Mus musculus (house mouse) : Ddx21 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 21)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ddx21 (DExD-box helicase 21)
Pan paniscus (bonobo/pygmy chimpanzee) : DDX21 (DExD-box helicase 21)
Canis lupus familiaris (dog) : DDX21 (DExD-box helicase 21)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ddx21 (DExD-box helicase 21)
Sus scrofa (pig) : DDX21 (DExD-box helicase 21)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02032,213,147 - 32,232,632 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2032,213,148 - 32,232,632 (-)Ensembl
Rnor_5.02033,997,711 - 34,017,196 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42029,838,671 - 29,860,514 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2031,953,138 - 31,973,565 (-)NCBICelera
Cytogenetic Map20q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ddx21
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307306
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.