Slc39a14 (solute carrier family 39 member 14) - Rat Genome Database

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Gene: Slc39a14 (solute carrier family 39 member 14) Rattus norvegicus
Analyze
Symbol: Slc39a14
Name: solute carrier family 39 member 14
RGD ID: 1307026
Description: Predicted to enable monoatomic anion:monoatomic cation symporter activity and transition metal ion transmembrane transporter activity. Predicted to be involved in several processes, including cellular response to glucose stimulus; negative regulation of cyclic-nucleotide phosphodiesterase activity; and transition metal ion transport. Predicted to act upstream of or within iron ion transmembrane transport and zinc ion transmembrane transport. Predicted to be located in apical plasma membrane; basolateral plasma membrane; and bounding membrane of organelle. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in hypermanganesemia with dystonia 2. Orthologous to human SLC39A14 (solute carrier family 39 member 14); PARTICIPATES IN iron uptake pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC306009; metal cation symporter ZIP14; solute carrier family 39 (zinc transporter), member 14; zinc transporter ZIP14
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21545,376,806 - 45,423,549 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1545,376,917 - 45,423,524 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1549,494,780 - 49,541,394 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01550,606,267 - 50,652,883 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01547,465,592 - 47,512,197 (-)NCBIRnor_WKY
Rnor_6.01551,982,872 - 52,029,841 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1551,982,982 - 52,029,816 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01555,707,497 - 55,752,631 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41550,703,198 - 50,749,644 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11550,721,996 - 50,738,831 (-)NCBI
Celera1545,056,455 - 45,103,098 (-)NCBICelera
Cytogenetic Map15p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (ISO)
1,3-dicyclohexylcarbodiimide  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (EXP)
2-methylcholine  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
acetamide  (EXP)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
carbon nanotube  (ISO)
chloroethene  (ISO)
cisplatin  (ISO)
cobalt atom  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
cyclophosphamide  (EXP)
cyclosporin A  (ISO)
dextran sulfate  (ISO)
dibenz[a,h]anthracene  (ISO)
diclofenac  (ISO)
diethyl maleate  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
folic acid  (ISO)
glafenine  (EXP)
hexane  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
isotretinoin  (ISO)
lipopolysaccharide  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
menadione  (ISO)
methapyrilene  (EXP,ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
motexafin gadolinium  (ISO)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
N-acetyl-L-cysteine  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
nickel atom  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
PCB138  (EXP)
phenacetin  (EXP)
phenobarbital  (ISO)
phenylhydrazine  (EXP)
pirinixic acid  (ISO)
progesterone  (ISO)
quercetin  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
senecionine  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichloroethene  (EXP)
triclosan  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
zidovudine  (ISO)
zinc acetate  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Regulators of Iron Homeostasis: New Players in Metabolism, Cell Death, and Disease. Bogdan AR, etal., Trends Biochem Sci. 2016 Mar;41(3):274-86. doi: 10.1016/j.tibs.2015.11.012. Epub 2015 Dec 23.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Cellular iron uptake, trafficking and metabolism: Key molecules and mechanisms and their roles in disease. Lane DJ, etal., Biochim Biophys Acta. 2015 May;1853(5):1130-44. doi: 10.1016/j.bbamcr.2015.01.021. Epub 2015 Feb 4.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15642354   PMID:16950869   PMID:18270315   PMID:20682781   PMID:21445361   PMID:21653899   PMID:21917916   PMID:22571646   PMID:25007852   PMID:27231142   PMID:27703010   PMID:27785531  
PMID:28536273   PMID:29621230   PMID:31028174   PMID:31699897  


Genomics

Comparative Map Data
Slc39a14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21545,376,806 - 45,423,549 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1545,376,917 - 45,423,524 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1549,494,780 - 49,541,394 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01550,606,267 - 50,652,883 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01547,465,592 - 47,512,197 (-)NCBIRnor_WKY
Rnor_6.01551,982,872 - 52,029,841 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1551,982,982 - 52,029,816 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01555,707,497 - 55,752,631 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41550,703,198 - 50,749,644 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11550,721,996 - 50,738,831 (-)NCBI
Celera1545,056,455 - 45,103,098 (-)NCBICelera
Cytogenetic Map15p11NCBI
SLC39A14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38822,367,278 - 22,434,129 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl822,367,278 - 22,434,129 (+)EnsemblGRCh38hg38GRCh38
GRCh37822,224,791 - 22,291,642 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36822,280,737 - 22,336,143 (+)NCBINCBI36Build 36hg18NCBI36
Celera821,186,754 - 21,253,275 (+)NCBICelera
Cytogenetic Map8p21.3NCBI
HuRef820,766,860 - 20,833,952 (+)NCBIHuRef
CHM1_1822,426,738 - 22,493,738 (+)NCBICHM1_1
T2T-CHM13v2.0822,641,238 - 22,707,959 (+)NCBIT2T-CHM13v2.0
Slc39a14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391470,540,916 - 70,588,873 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1470,540,918 - 70,588,874 (-)EnsemblGRCm39 Ensembl
GRCm381470,303,467 - 70,351,452 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1470,303,469 - 70,351,425 (-)EnsemblGRCm38mm10GRCm38
MGSCv371470,703,274 - 70,751,231 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361469,038,547 - 69,086,505 (-)NCBIMGSCv36mm8
Celera1467,844,935 - 67,892,707 (-)NCBICelera
Cytogenetic Map14D2NCBI
Slc39a14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540345,827,942 - 45,867,309 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540345,828,247 - 45,867,309 (+)NCBIChiLan1.0ChiLan1.0
SLC39A14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1818,555,894 - 18,610,606 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl818,555,895 - 18,621,510 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0821,617,529 - 21,672,726 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
SLC39A14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12534,854,371 - 34,901,030 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2534,846,653 - 34,869,695 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2535,443,359 - 35,490,017 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02535,064,234 - 35,111,050 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2535,055,363 - 35,111,056 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12535,010,469 - 35,057,085 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02534,864,496 - 34,911,061 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02535,019,411 - 35,066,227 (-)NCBIUU_Cfam_GSD_1.0
Slc39a14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053647 - 9,308 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049390451 - 7,491 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC39A14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl146,639,206 - 6,687,924 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1146,639,485 - 6,687,929 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2147,073,522 - 7,120,393 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC39A14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1820,446,756 - 20,502,585 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605221,729,303 - 21,788,987 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc39a14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475817,912,827 - 17,953,294 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475817,911,889 - 17,954,870 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc39a14
121 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:438
Count of miRNA genes:251
Interacting mature miRNAs:319
Transcripts:ENSRNOT00000013067
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)151985656646187442Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
2293691Bmd37Bone mineral density QTL 376.60.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)153361105871477291Rat
2293686Bmd36Bone mineral density QTL 367.40.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)153361105871477291Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)153405413979054139Rat
7411725Strs7Sensitivity to stroke QTL 73.8cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)154028990149308583Rat
2306968Anxrr23Anxiety related response QTL 234.83reflex trait (VT:0001961)amplitude of the acoustic startle response (CMO:0001520)154063126846187442Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)154063126898288169Rat

Markers in Region
RH139853  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21545,376,996 - 45,377,181 (+)MAPPERmRatBN7.2
Rnor_6.01551,983,062 - 51,983,246NCBIRnor6.0
Rnor_5.01555,707,687 - 55,707,871UniSTSRnor5.0
RGSC_v3.41550,703,278 - 50,703,462UniSTSRGSC3.4
Celera1545,056,535 - 45,056,719UniSTS
Cytogenetic Map15p11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 39 49 41 2 41 59 5 31 4
Low 4 8 17 8 11 15 30 10 7 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000013067   ⟹   ENSRNOP00000013066
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1545,376,917 - 45,423,524 (-)Ensembl
Rnor_6.0 Ensembl1551,982,982 - 52,029,816 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000105917   ⟹   ENSRNOP00000091533
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1545,376,917 - 45,423,524 (-)Ensembl
RefSeq Acc Id: NM_001107275   ⟹   NP_001100745
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21545,376,917 - 45,423,524 (-)NCBI
Rnor_6.01551,982,982 - 52,029,816 (-)NCBI
Rnor_5.01555,707,497 - 55,752,631 (-)NCBI
RGSC_v3.41550,703,198 - 50,749,644 (-)RGD
Celera1545,056,455 - 45,103,098 (-)RGD
Sequence:
RefSeq Acc Id: XM_006252270   ⟹   XP_006252332
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21545,376,806 - 45,423,549 (-)NCBI
Rnor_6.01551,982,872 - 52,029,841 (-)NCBI
Rnor_5.01555,707,497 - 55,752,631 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039093343   ⟹   XP_038949271
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21545,376,806 - 45,423,546 (-)NCBI
RefSeq Acc Id: XM_039093344   ⟹   XP_038949272
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21545,376,806 - 45,423,549 (-)NCBI
RefSeq Acc Id: XM_039093345   ⟹   XP_038949273
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21545,376,806 - 45,423,546 (-)NCBI
RefSeq Acc Id: XM_039093346   ⟹   XP_038949274
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21545,376,806 - 45,423,543 (-)NCBI
RefSeq Acc Id: XM_039093347   ⟹   XP_038949275
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21545,376,806 - 45,398,808 (-)NCBI
RefSeq Acc Id: XM_039093348   ⟹   XP_038949276
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21545,376,806 - 45,398,811 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_001100745   ⟸   NM_001107275
- Peptide Label: precursor
- UniProtKB: D3ZZM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252332   ⟸   XM_006252270
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000013066   ⟸   ENSRNOT00000013067
RefSeq Acc Id: XP_038949272   ⟸   XM_039093344
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949271   ⟸   XM_039093343
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949273   ⟸   XM_039093345
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949274   ⟸   XM_039093346
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949276   ⟸   XM_039093348
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038949275   ⟸   XM_039093347
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000091533   ⟸   ENSRNOT00000105917

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZZM0-F1-model_v2 AlphaFold D3ZZM0 1-490 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699807
Promoter ID:EPDNEW_R10330
Type:initiation region
Name:Slc39a14_1
Description:solute carrier family 39 member 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01552,029,814 - 52,029,874EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307026 AgrOrtholog
BioCyc Gene G2FUF-13228 BioCyc
Ensembl Genes ENSRNOG00000009832 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000013066 ENTREZGENE
  ENSRNOP00000013066.2 UniProtKB/TrEMBL
  ENSRNOP00000091533 ENTREZGENE
  ENSRNOP00000091533.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013067 ENTREZGENE
  ENSRNOT00000013067.4 UniProtKB/TrEMBL
  ENSRNOT00000105917 ENTREZGENE
  ENSRNOT00000105917.1 UniProtKB/TrEMBL
InterPro ZIP UniProtKB/TrEMBL
KEGG Report rno:306009 UniProtKB/TrEMBL
NCBI Gene 306009 ENTREZGENE
Pfam Zip UniProtKB/TrEMBL
PhenoGen Slc39a14 PhenoGen
UniProt A0A8I6ABU1 ENTREZGENE, UniProtKB/TrEMBL
  D3ZZM0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-24 Slc39a14  solute carrier family 39 member 14  Slc39a14  solute carrier family 39 (zinc transporter), member 14  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Slc39a14  solute carrier family 39 (zinc transporter), member 14   Slc39a14_predicted  solute carrier family 39 (zinc transporter), member 14 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Slc39a14_predicted  solute carrier family 39 (zinc transporter), member 14 (predicted)      Symbol and Name status set to approved 70820 APPROVED