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Gene: Wdr20 (WD repeat domain 20) Rattus norvegicus

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Symbol:

Wdr20

Name:

WD repeat domain 20

RGD ID:

1306499

Description:

Predicted to enable deubiquitinase activator activity. Predicted to be located in cytoplasm and nucleus. Orthologous to human WDR20 (WD repeat domain 20); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC314453; WD repeat domain 20a; WD repeat-containing protein 20; Wdr20a

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	WDR20 (WD repeat domain 20)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Wdr20 (WD repeat domain 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Wdr20 (WD repeat domain 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	WDR20 (WD repeat domain 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	WDR20 (WD repeat domain 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Wdr20 (WD repeat domain 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	WDR20 (WD repeat domain 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	WDR20 (WD repeat domain 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Wdr20 (WD repeat domain 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	WDR20 (WD repeat domain 20)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Wdr20rt (WD repeat domain 20, retrogene)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Mus musculus (house mouse):	Wdr20 (WD repeat domain 20)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG6420	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	wdr-20	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	wdr20a	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	wdr20	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	135,572,502 - 135,642,688 (+)	NCBI		GRCr8
mRatBN7.2	6	129,751,952 - 129,821,464 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	129,752,014 - 129,847,339 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	129,928,996 - 129,998,124 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	130,224,988 - 130,294,116 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	129,588,973 - 129,658,402 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	135,156,984 - 135,226,425 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	135,156,984 - 135,226,425 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	145,187,523 - 145,256,870 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	135,460,172 - 135,529,326 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	135,466,451 - 135,523,981 (+)	NCBI
Celera	6	127,319,986 - 127,389,463 (+)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Wdr20	Rat	Charcot-Marie-Tooth disease axonal type 2O		ISO	WDR20 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Charcot-Marie-Tooth disease axonal type 2O	ClinVar	PMID:28492532 and PMID:30510536
Wdr20	Rat	Developmental Disabilities		ISO	WDR20 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Global developmental delay	ClinVar	PMID:25741868
Wdr20	Rat	immunodeficiency 132A		ISO	WDR20 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Herpes simplex encephalitis more ...	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Wdr20	Rat	papillary thyroid carcinoma		ISO	WDR20 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:28030816

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Wdr20	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Wdr20 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of WDR20 mRNA	CTD	PMID:21570461
Wdr20	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of WDR20 mRNA	CTD	PMID:33387578
Wdr20	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of WDR20 mRNA	CTD	PMID:32109520
Wdr20	Rat	4,4'-sulfonyldiphenol	increases expression	ISO	Wdr20 (Mus musculus)	6480464	bisphenol S results in increased expression of WDR20 mRNA	CTD	PMID:39298647
Wdr20	Rat	6-propyl-2-thiouracil	decreases expression	EXP		6480464	Propylthiouracil results in decreased expression of WDR20 mRNA	CTD	PMID:25825206
Wdr20	Rat	acrylamide	increases expression	EXP		6480464	Acrylamide results in increased expression of WDR20 mRNA	CTD	PMID:28959563
Wdr20	Rat	antirheumatic drug	increases expression	ISO	WDR20 (Homo sapiens)	6480464	Antirheumatic Agents results in increased expression of WDR20 mRNA	CTD	PMID:24449571
Wdr20	Rat	arsane	affects methylation	ISO	WDR20 (Homo sapiens)	6480464	Arsenic affects the methylation of WDR20 gene	CTD	PMID:25304211
Wdr20	Rat	arsenic atom	affects methylation	ISO	WDR20 (Homo sapiens)	6480464	Arsenic affects the methylation of WDR20 gene	CTD	PMID:25304211
Wdr20	Rat	benzo[a]pyrene diol epoxide I	decreases expression	ISO	WDR20 (Homo sapiens)	6480464	7 more ...	CTD	PMID:19150397
Wdr20	Rat	bisphenol A	decreases expression	ISO	Wdr20 (Mus musculus)	6480464	bisphenol A results in decreased expression of WDR20 mRNA	CTD	PMID:26063408
Wdr20	Rat	bisphenol A	decreases methylation	ISO	WDR20 (Homo sapiens)	6480464	bisphenol A results in decreased methylation of WDR20 gene	CTD	PMID:31601247
Wdr20	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of WDR20 mRNA	CTD	PMID:30816183 and PMID:34947998
Wdr20	Rat	bisphenol A	decreases expression	ISO	WDR20 (Homo sapiens)	6480464	bisphenol A results in decreased expression of WDR20 mRNA	CTD	PMID:29275510
Wdr20	Rat	bisphenol A	increases methylation	EXP		6480464	bisphenol A results in increased methylation of WDR20 gene	CTD	PMID:28505145
Wdr20	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of WDR20 mRNA	CTD	PMID:25181051
Wdr20	Rat	caffeine	affects phosphorylation	ISO	WDR20 (Homo sapiens)	6480464	Caffeine affects the phosphorylation of WDR20 protein	CTD	PMID:35688186
Wdr20	Rat	carbon nanotube	increases expression	ISO	Wdr20 (Mus musculus)	6480464	Nanotubes and Carbon results in increased expression of WDR20 mRNA	CTD	PMID:25554681
Wdr20	Rat	cobalt dichloride	increases expression	EXP		6480464	cobaltous chloride results in increased expression of WDR20 mRNA	CTD	PMID:24386269
Wdr20	Rat	copper atom	multiple interactions	ISO	WDR20 (Homo sapiens)	6480464	[Disulfiram binds to Copper] which results in decreased expression of WDR20 mRNA	CTD	PMID:24690739
Wdr20	Rat	copper(0)	multiple interactions	ISO	WDR20 (Homo sapiens)	6480464	[Disulfiram binds to Copper] which results in decreased expression of WDR20 mRNA	CTD	PMID:24690739
Wdr20	Rat	crocidolite asbestos	decreases expression	ISO	Wdr20 (Mus musculus)	6480464	Asbestos and Crocidolite results in decreased expression of WDR20 mRNA	CTD	PMID:29279043
Wdr20	Rat	crocidolite asbestos	increases expression	ISO	WDR20 (Homo sapiens)	6480464	Asbestos and Crocidolite results in increased expression of WDR20 mRNA	CTD	PMID:18687144
Wdr20	Rat	D-mannitol	decreases expression	ISO	Wdr20 (Mus musculus)	6480464	Mannitol results in decreased expression of WDR20 mRNA	CTD	PMID:25270620
Wdr20	Rat	deoxynivalenol	increases expression	ISO	WDR20 (Homo sapiens)	6480464	deoxynivalenol results in increased expression of WDR20 mRNA	CTD	PMID:31863870
Wdr20	Rat	Dibutyl phosphate	affects expression	ISO	WDR20 (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of WDR20 mRNA	CTD	PMID:37042841
Wdr20	Rat	diquat	decreases expression	ISO	Wdr20 (Mus musculus)	6480464	Diquat results in decreased expression of WDR20 protein	CTD	PMID:36851058
Wdr20	Rat	disulfiram	multiple interactions	ISO	WDR20 (Homo sapiens)	6480464	[Disulfiram binds to Copper] which results in decreased expression of WDR20 mRNA	CTD	PMID:24690739
Wdr20	Rat	formaldehyde	decreases expression	ISO	WDR20 (Homo sapiens)	6480464	Formaldehyde results in decreased expression of WDR20 mRNA	CTD	PMID:20655997
Wdr20	Rat	FR900359	decreases phosphorylation	ISO	WDR20 (Homo sapiens)	6480464	FR900359 results in decreased phosphorylation of WDR20 protein	CTD	PMID:37730182
Wdr20	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of WDR20 mRNA	CTD	PMID:33387578
Wdr20	Rat	hydrogen peroxide	multiple interactions	ISO	WDR20 (Homo sapiens)	6480464	[Hydrogen Peroxide co-treated with Theophylline] results in increased expression of WDR20 protein	CTD	PMID:18951874
Wdr20	Rat	hydrogen peroxide	decreases expression	ISO	WDR20 (Homo sapiens)	6480464	Hydrogen Peroxide results in decreased expression of WDR20 mRNA	CTD	PMID:18951874
Wdr20	Rat	methylmercury chloride	decreases expression	ISO	WDR20 (Homo sapiens)	6480464	methylmercuric chloride results in decreased expression of WDR20 mRNA	CTD	PMID:28001369
Wdr20	Rat	paracetamol	decreases expression	EXP		6480464	Acetaminophen results in decreased expression of WDR20 mRNA	CTD	PMID:33387578
Wdr20	Rat	theophylline	multiple interactions	ISO	WDR20 (Homo sapiens)	6480464	[Hydrogen Peroxide co-treated with Theophylline] results in increased expression of WDR20 protein	CTD	PMID:18951874
Wdr20	Rat	triphenyl phosphate	affects expression	ISO	WDR20 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of WDR20 mRNA	CTD	PMID:37042841
Wdr20	Rat	triptonide	increases expression	ISO	Wdr20 (Mus musculus)	6480464	triptonide results in increased expression of WDR20 mRNA	CTD	PMID:33045310
Wdr20	Rat	valproic acid	decreases expression	ISO	WDR20 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of WDR20 mRNA	CTD	PMID:28001369
Wdr20	Rat	zinc atom	multiple interactions	ISO	WDR20 (Homo sapiens)	6480464	[PCI 5002 co-treated with Zinc] results in increased expression of WDR20 mRNA	CTD	PMID:18593933
Wdr20	Rat	zinc(0)	multiple interactions	ISO	WDR20 (Homo sapiens)	6480464	[PCI 5002 co-treated with Zinc] results in increased expression of WDR20 mRNA	CTD	PMID:18593933

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Wdr20	Rat	cytoplasm	located_in	ISO	WDR20 (Homo sapiens)	1624291	PMID:30466959 and PMID:33844468	RGD	PMID:30466959 and PMID:33844468
Wdr20	Rat	cytoplasm	located_in	IEA	UniProtKB:Q8TBZ3 and ensembl:ENSP00000341037	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Wdr20	Rat	nucleus	located_in	ISO	WDR20 (Homo sapiens)	1624291	PMID:30466959 and PMID:33844468	RGD	PMID:30466959 and PMID:33844468
Wdr20	Rat	nucleus	located_in	IEA	UniProtKB:Q8TBZ3 and ensembl:ENSP00000341037	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Wdr20	Rat	deubiquitinase activator activity	enables	ISO	WDR20 (Homo sapiens)	1624291	PMID:20147737 and PMID:27373336	RGD	PMID:20147737 and PMID:27373336
Wdr20	Rat	deubiquitinase activator activity	enables	IEA	UniProtKB:Q8TBZ3 and ensembl:ENSP00000341037	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Wdr20	Rat	protein binding	enables	ISO	WDR20 (Homo sapiens)	1624291	UniProtKB:O75317 more ...	RGD	PMID:19615732 more ...
Wdr20	Rat	protein binding	enables	ISO	WDR20 (Homo sapiens) and UniProtKB:Q8TBZ3-3	1624291	UniProtKB:P06396 more ...	RGD	PMID:32814053

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:12477932

Wdr20
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	135,572,502 - 135,642,688 (+)	NCBI		GRCr8
mRatBN7.2	6	129,751,952 - 129,821,464 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	129,752,014 - 129,847,339 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	129,928,996 - 129,998,124 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	130,224,988 - 130,294,116 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	129,588,973 - 129,658,402 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	135,156,984 - 135,226,425 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	135,156,984 - 135,226,425 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	145,187,523 - 145,256,870 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	135,460,172 - 135,529,326 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	135,466,451 - 135,523,981 (+)	NCBI
Celera	6	127,319,986 - 127,389,463 (+)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

WDR20
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	102,139,423 - 102,224,839 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	102,139,503 - 102,224,847 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	102,605,760 - 102,690,010 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	101,675,965 - 101,759,763 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	101,675,964 - 101,746,619	NCBI
Celera	14	82,660,708 - 82,744,515 (+)	NCBI		Celera
Cytogenetic Map	14	q32.31	NCBI
HuRef	14	82,785,154 - 82,868,856 (+)	NCBI		HuRef
CHM1_1	14	102,544,044 - 102,627,837 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	96,375,006 - 96,460,287 (+)	NCBI		T2T-CHM13v2.0

Wdr20
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	110,701,459 - 110,770,709 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	110,704,378 - 110,770,672 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	110,735,025 - 110,804,275 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	110,737,944 - 110,804,238 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	111,976,159 - 112,033,238 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	111,185,756 - 111,242,835 (+)	NCBI		MGSCv36	mm8
Celera	12	111,930,809 - 111,988,220 (+)	NCBI		Celera
Cytogenetic Map	12	F1	NCBI
cM Map	12	60.78	NCBI

Wdr20
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955538	1,520,342 - 1,590,086 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955538	1,520,336 - 1,590,824 (+)	NCBI	ChiLan1.0	ChiLan1.0

WDR20
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	103,292,128 - 103,376,004 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	102,508,621 - 102,592,058 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	82,759,715 - 82,843,491 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	102,577,138 - 102,660,459 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	102,577,138 - 102,660,459 (+)	Ensembl	panpan1.1		panPan2

WDR20
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	70,150,090 - 70,208,683 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	70,146,967 - 70,199,975 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	69,661,023 - 69,723,025 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	70,424,795 - 70,486,624 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	70,424,842 - 70,486,602 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	70,089,081 - 70,151,247 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	70,154,432 - 70,216,206 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	70,554,779 - 70,616,964 (+)	NCBI		UU_Cfam_GSD_1.0

Wdr20
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	3,767,187 - 3,861,060 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936835	355,288 - 428,725 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936835	355,300 - 428,723 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WDR20
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa10.2	7	129,586,786 - 129,644,806 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

WDR20
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	80,064,362 - 80,152,706 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	80,064,421 - 80,152,881 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	67,263,768 - 67,348,340 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Wdr20
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	2,146,404 - 2,205,324 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	2,145,812 - 2,205,365 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Wdr20
245 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	584
Count of miRNA genes:	267
Interacting mature miRNAs:	336
Transcripts:	ENSRNOT00000009709
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12801411	Schws8	Schwannoma susceptibility QTL 8			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	94968928	139968928	Rat
4145118	Mcs26	Mammary carcinoma susceptibility QTL 26		0.0001	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	6	106752656	132339866	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	72202632	130919985	Rat
1581563	Uae33	Urinary albumin excretion QTL 33			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	72227641	130729205	Rat
10054138	Gmadr3	Adrenal mass QTL 3	3.68	0.00045	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	6	85140138	130140138	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	122549046	137801795	Rat
61414	Pia3	Pristane induced arthritis QTL 3	4.5		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	6	94968928	137848904	Rat
71111	Iddm8	Insulin dependent diabetes mellitus QTL 8	1.9	0.002	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	6	105156861	140994061	Rat
1358355	Srcrt4	Stress Responsive Cort QTL 4	6.39		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	100364669	140994061	Rat
724513	Uae14	Urinary albumin excretion QTL 14	6.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	85311061	133478515	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	88047916	133047916	Rat
731173	Uae22	Urinary albumin excretion QTL 22	10.1		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	65531555	140994061	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	122549046	140994061	Rat
10054123	Srcrt6	Stress Responsive Cort QTL 6	2.5	0.0043	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	85140138	130140138	Rat
724536	Uae7	Urinary albumin excretion QTL 7	3.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	72202632	130729475	Rat
737976	Pia24	Pristane induced arthritis QTL 24			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	6	112636280	140994061	Rat
2312560	Pur20	Proteinuria QTL 20	2.1	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	125628133	137801795	Rat
2313399	Anxrr28	Anxiety related response QTL 28			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	6	100671796	132340886	Rat
1298087	Iddm18	Insulin dependent diabetes mellitus QTL 18		0.0001	urine glucose amount (VT:0001758)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	6	116506292	130245370	Rat
1581550	Pur8	Proteinuria QTL 8			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	72227641	130729205	Rat
2290393	Uae37	Urinary albumin excretion QTL 37		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	65531555	140994061	Rat
8552796	Vie3	Viral induced encephalitis QTL 3	2.6		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	6	96833997	140994061	Rat
1300076	Glom8	Glomerulus QTL 8	7	9e-09	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	6	86894788	131894788	Rat
2293085	Iddm29	Insulin dependent diabetes mellitus QTL 29	7.66		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	122549046	140286318	Rat

RH136892

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	129,819,622 - 129,819,818 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	135,224,584 - 135,224,779	NCBI	Rnor6.0
Rnor_5.0	6	145,189,169 - 145,189,364	UniSTS	Rnor5.0
RGSC_v3.4	6	135,527,485 - 135,527,680	UniSTS	RGSC3.4
Celera	6	127,387,622 - 127,387,817	UniSTS
RH 3.4 Map	6	784.7	UniSTS
Cytogenetic Map	6	q32	UniSTS

RH139772

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	129,809,502 - 129,809,715 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	135,214,464 - 135,214,676	NCBI	Rnor6.0
Rnor_5.0	6	145,199,272 - 145,199,484	UniSTS	Rnor5.0
RGSC_v3.4	6	135,517,365 - 135,517,577	UniSTS	RGSC3.4
Celera	6	127,377,131 - 127,377,343	UniSTS
RH 3.4 Map	6	785.8	UniSTS
Cytogenetic Map	6	q32	UniSTS

UniSTS:224875

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	129,808,750 - 129,808,914 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	135,213,712 - 135,213,875	NCBI	Rnor6.0
Rnor_5.0	6	145,200,073 - 145,200,236	UniSTS	Rnor5.0
RGSC_v3.4	6	135,516,613 - 135,516,776	UniSTS	RGSC3.4
Celera	6	127,376,379 - 127,376,542	UniSTS
Cytogenetic Map	6	q32	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001100894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005505530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC121220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC091299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009709 ⟹ ENSRNOP00000009709

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	129,752,014 - 129,821,464 (+)	Ensembl
Rnor_6.0 Ensembl	6	135,156,984 - 135,226,425 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082595 ⟹ ENSRNOP00000072178

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	129,752,138 - 129,809,915 (+)	Ensembl
Rnor_6.0 Ensembl	6	135,157,067 - 135,216,768 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099617 ⟹ ENSRNOP00000085763

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	129,752,123 - 129,847,339 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105069 ⟹ ENSRNOP00000083245

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	129,752,104 - 129,809,926 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106359 ⟹ ENSRNOP00000077142

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	129,752,014 - 129,823,792 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114885 ⟹ ENSRNOP00000087682

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	129,752,014 - 129,823,792 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115600 ⟹ ENSRNOP00000094139

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	129,752,014 - 129,795,723 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118053 ⟹ ENSRNOP00000083213

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	129,752,014 - 129,799,522 (+)	Ensembl

RefSeq Acc Id:

NM_001100894 ⟹ NP_001094364

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,246 - 135,642,688 (+)	NCBI
mRatBN7.2	6	129,752,014 - 129,821,464 (+)	NCBI
Rnor_6.0	6	135,156,984 - 135,226,425 (+)	NCBI
Rnor_5.0	6	145,187,523 - 145,256,870 (-)	NCBI
RGSC_v3.4	6	135,460,172 - 135,529,326 (+)	RGD
Celera	6	127,319,986 - 127,389,463 (+)	RGD

Sequence:

show sequence

GGGGGCTGGCTCGCCAATGGGCGGGGCCGCGAAGAAGGGGGTGGGGAGTGGAGAGCGAGCGGCCGAGGACGGCGCCTGCGCGGTGGGCGTGATCCGGGCACTTAGGGCAGGATGAACGCTGCTTTCCA
AGATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCG
CAGGGATCCAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGCCGGGAGCTCTACTTCTATATCTACAAGGGGGTCCGCAAGGCTGC
TGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCCACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAGAGCGTCTCTCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCC
AGCTTATAGACCCAATCAAGAAAGAAACCAGCAAGCTATTTAATGAGGAAAGACTAATAGACAAGTCACGCGTAACCTGTGTCAAATGGGTTCCTGGTTCGGAAAGCCTTTTCCTAGTAGCCCATTCA
AGTGGGAGCATGTACTTATATAATGTGGAGCACACTTGTGGCACCACAGCCCCCCACTACCAGCTCCTGAAGCAGGGAGAGAGCTTTGCGGTGCACACTTGCAAGAGCAAATCCACGAGGAACCCTCT
CCTTAAGTGGACAGTGGGCGAGGGGGCCCTCAACGAGTTTGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGTGTGAGCCAGGACGGGTTTCTGCGTGTGTTCAACTTTGACTCAGTGGAGCTGCACG
GTACAATGAAAAGCTACTTTGGGGGCTTGCTTTGTGTGTGCTGGAGCCCAGATGGCAAGTACATTGTGACAGGTGGAGAGGACGACTTGGTGACAGTTTGGTCCTTTCTAGACTGCCGAGTAATAGCT
AGAGGCCATGGGCACAAGTCCTGGGTCAGTGTTGTAGCATTTGATCCCTATACTACTAGTGTAGAAGAAAGTGATCCTATGGAGTTTAGTGGCAGTGACGAGGACTTCCAGGACCTTCTTCACTTTGG
CAGAGATCGAGCGAACAGTACACAATCTAGGCTATCCAAACGGAACTCTACAGACAGCCGCCCTGTAAGTGTTACGTATCGGTTTGGTTCAGTGGGCCAGGATACACAGCTGTGCTTATGGGACCTTA
CAGAAGACATCCTTTTCCCTCACCAGCCCCTCTCAAGAGCAAGGACACACACAAACGTTATGAATGCCACAAGTCCGCCTGCCGGAAGCAATGGGAACAGTGTCACTACACCTGGGGACTCTGGGCCC
CCTCCATTACCGCGGTCCAATAGCCTTCCACACTCAGCAGTCTCCAATGCTGGTAGCAAAAGCAGCGTCATGGACGGGGCCATTGCATCTGGGGTCAGCAAGTTTGCAACTTTGTCGCTACATGACCG
GAAGGAGAGACACCACGAGAAAGACCATAAACGAAATCATAGTATGGGACACATTTCCAGCAAGAGCAGTGACAAACTGAACCTAGTTACTAAAGCCAAAACGGACCCAGCTAAAACTCTGGGGACAT
CCCTGTGTCCTCGGATGGAAGATGTTCCCTTGTTAGAGCCACTGATCTGTAAAAAGATAGCTCATGAGAGACTGACGGTATTGGTTTTTCTTGAAGACTGTCTAGTCACTGCTTGTCAGGAGGGATTT
ATTTGCACATGGGCAAGGCCTGGTAAAGTGGGCTTGTTGTCATCCCCAAACCAGGCCAGTTCTCCAGGTGGGACTGTAGTGTAGCAGTTACACTGCTGCTGCCGGGCTCCCCGGACACGCGTGGACCG
AGGGAGTGACAGACGACTACGGAGCCATGAGCTGCGCTGGAGCCACAGGCAGGCGGCAGGAAGCAGCGGCCGGCAGGGCTGTGTGGAGCTGCTAAACCCAAAGAGTTGTTCCCTTTAAAGCCAGTCTG
TGGGGCTGCAGTAAGGACTGAAGTGGAGTTTCCTGCTTCTACTCTAAACTCAATGTAACTAAACCCACATATAATATATATATATATATATATATATACATATATACATAGTGTAAATAAGTGTTTCT
CGAACAGGAAACCTTAAATCGAGCTGTTCTGAATAGCACTTGGCTCTGGTTTTGCACTGATCTGATTTATACTTTAGGTGGTCATCAGACGCCTGGGGTGCACTTGTGGAGACAGTTGTCACCTTCTG
ACTTAACACGTGCTGCAGAAAGACAGATGCTGCAATCATAGACTTAAAAATCGTTTGCACTTAAAATAGTTTAATGCTAATAGACAATGACTTTAAATATGGGGGTAGCGGACTCCCGGCCTCCACGA
TACGGAGTGGAGATAAAAACCCTTTTTATCTGTTAACATTTATTTTAGTACTGTTGTTTCTGATGCAATCAAGTCTGTATTATATGTGTAAATAATGTAATTCTGAAATGGGGGAAATAGTCACTCCC
ACTAGTAATTTTCATCATTTAAGAGTGATATTTCTAATTCACAAAAACATTAATATTAAAATTATCTTGAATATACTATTTGTTTATCCTTTTTTAACTGTATGGTTCTTTTTGTTTGCTTTGGCCTC
ATTCCTTGGTTGGTGTTGAAGTACTTCATTCTTTGTGGACCACATCCCTTGATCCTCCTGTCAGTCAGTCTGGTCAAAGCACGTCTTTTTGGGGAATTCTTGTCTCTGGGCCAAGTTGACACACCATG
GGAGCTGCCCAGGCATGGGGACTCTAGTGTAGGCACACGGCTTTTTCTTTATGCCTTGGAGTCCACCTGCTATCCTTGAAAGCTGAGACCTCAGACTGTAAGTTTCCACTGCTTCAGCGCAGCCCTGG
GCTAGCTGGGACAACCACGTGGGCCTTCCAGAGGCTGGCATCAGCGGGCGAGCGTCTTCCTGCTCACCTGTCACTGCTGCAGTGTAATGGAGACGAAGCCCAGATTCCCAGGCAGAAGGACCTTTCTC
AGCTTCTAAACTAAGAACTGGGAAGTTCTTTTTTTTTTTCTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGGTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATGCCCAACCCCCCCTTTCTC
AGCTTCTAAACAGTCACACACAGCGGGGGTGAGAGTAAGACAAGGCTTCTGAACCATTTCTCCAGTGAGTCCATTAAACTGAGGCGTGTGGAGGGCTCGTTAGGTTGGCTGAAGTTTTAGCAGCTGTG
ACTGCCAAGGCTGCGGCTGCACAGTTCGCCAAGGCAAAGCCCAGGTTTGTCTTCATTCACTGTAGCTCCCTGGCTCCCACGCTGGGGAATCCACTATCTCTGCTGATGCCTACAAGGCCTCTAGCCTT
GCCTCAGCCTTGGGAAGGTGCAACCTAGGACACTAAGACATTTTCTTTCCTGTTTCGTTCTGTTGTACTCTGGTTTGACAGGCCTTGGCTGGCCTGGAACTCAGTGTAGCTTAGATAGATTACTTCAA
AATGGAAGCAGTCGTGCTCTCAGCCTTCCAAGTCTCAGAGCATGGATTACAGGCATGTGGTTAGAGGACAGTCGAGGGAGTCGTCTCTTTCCTTCTACCATGTGGGTTCTGGTGGTCAAGTTCGGTTG
TGAGGGTTGGTGGCACTGAGCCTGCTCACTGTAAGTAAAACGATTTCTAAGTCATATGCTCAGGTCATGTTAGAGGGAAGTGTTGACATTTTACAGTTTGGTGTTCCTGTCACCTTGGAGCACTGATC
ACACAGAAAAACTCAGCCCTTTGAGTCCAAAATGCCCACAAGAAAGTGACTAGGGACTGCCCTGGAAGCCCAAGTCTGCAGCACAGAGCCTTGACCTCCCAGAGCAGCTCTGTCCTAGACGCTCCCAT
CTGTAGGAAGTGAGAGGTGGACTCGAGGGCAGCAGGTACTTGTGTGAGGCTTGAGCACCATTTGAGGAGATGCTCCAGTTGTGTCCCTCAGCTCTCGCTGACCACCACTCAGGGGCCTTGGTCCTTTC
CCTGCCTCACCCAGTCTGTGTCGCCCTATGTTTTCATTTGACCCACGGTGTCTCAGTTT

hide sequence

RefSeq Acc Id:

XM_006240583 ⟹ XP_006240645

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,294 - 135,635,187 (+)	NCBI
mRatBN7.2	6	129,752,002 - 129,813,967 (+)	NCBI
Rnor_6.0	6	135,157,046 - 135,218,924 (+)	NCBI
Rnor_5.0	6	145,187,523 - 145,256,870 (-)	NCBI

Sequence:

show sequence

CCGAGGACGGCGCCTGCGCGGTGGGCGTGATCCGGGCACTTAGGGCAGGATGAACGCTGCTTTC
CAAGATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACT
CGCAGGGATCCAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGCCGGGAGCTCTACTTCTATATCTACAAGGGGGTCCGCAAGGCT
GCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCCACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAGAGCGTCTCTCTCCTAGTGGGCTTTTCCGCAGGCCAAGT
CCAGCTTATAGACCCAATCAAGAAAGAAACCAGCAAGCTATTTAATGAGGAAAGACTAATAGACAAGTCACGCGTAACCTGTGTCAAATGGGTTCCTGGTTCGGAAAGCCTTTTCCTAGTAGCCCATT
CAAGTGGGAGCATGTACTTATATAATGTGGAGCACACTTGTGGCACCACAGCCCCCCACTACCAGCTCCTGAAGCAGGGAGAGAGCTTTGCGGTGCACACTTGCAAGAGCAAATCCACGAGGAACCCT
CTCCTTAAGTGGACAGTGGGCGAGGGGGCCCTCAACGAGTTTGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGTGTGAGCCAGGACGGGTTTCTGCGTGTGTTCAACTTTGACTCAGTGGAGCTGCA
CGGTACAATGAAAAGCTACTTTGGGGGCTTGCTTTGTGTGTGCTGGAGCCCAGATGGCAAGTACATTGTGACAGGTGGAGAGGACGACTTGGTGACAGTTTGGTCCTTTCTAGACTGCCGAGTAATAG
CTAGAGGCCATGGGCACAAGTCCTGGGTCAGTGTTGTAGCATTTGATCCCTATACTACTAGTGTAGAAGAAAGTGATCCTATGGAGTTTAGTGGCAGTGACGAGGACTTCCAGGACCTTCTTCACTTT
GGCAGAGATCGAGCGAACAGTACACAATCTAGGCTATCCAAACGGAACTCTACAGACAGCCGCCCTGTAAGTGTTACGTATCGGTTTGGTTCAGTGGGCCAGGATACACAGCTGTGCTTATGGGACCT
TACAGAAGACATCCTTTTCCCTCACCAGCCCCTCTCAAGAGCAAGGACACACACAAACGTTATGAATGCCACAAGTCCGCCTGCCGGAAGCAATGGGAACAGTGTCACTACACCTGGGGACTCTGGGC
CCCCTCCATTACCGCGGTCCAATAGCCTTCCACACTCAGCAGTCTCCAATGCTGGTAGCAAAAGCAGCGTCATGGACGGGGCCATTGCATCTGGGGTCAGCAAGTTTGCAACTTTGTCGCTACATGAC
CGGAAGGAGAGACACCACGAGAAAGACCATAAACGAAATCATAGTATGGGACACATTTCCAGCAAGAGCAGTGACAAACTGAACCTAGTTACTAAAGCCAAAACGGACCCAGCTAAAACTCTGGGGAC
ATCCCTGTGTCCTCGGATGGAAGATGTTCCCTTGTTAGAGCCACTGATCTGTAAAAAGATAGCTCATGAGAGACTGACGGTATTGGTTTTTCTTGAAGACTGTCTAGTCACTGCTTGTCAGGAGGGAT
TTATTTGCACATGGGCAAGGCCTGGTAAAGTGTCGGCAGAGCAGTTCTGCAGGCAGGAGGACAGAGTGCAAGGTGTTCTCCAAGACCAGAACTAAAGGTGCGGCAGCTCCAGAAGAGGGTGCTGGTGC
TGGAGGGCGGGGCTCCTCTCCCCTTGTGCCCTGCAAACAGAGGTGGTGGGGTGTCATGGGGTTGCAACAATTGTCATGGTGGTTCCTGATCCCCAGAGAATGAGAAACAGTGCCACTGTGCTTCCACA
GTAGCCACCCAGAGAAATTTTGGGCGCATGTTTTAGTTTTCTCAACAAACATTGAGCTTCGTCATCAAAACTTCCCTGAGCATTTCATGAGCAGGACTGTCTTTGGTAACTAGCGCCTGGAGTAAAGC
AGCTTTTACCAAGAGGTTCCTACAGGCAGAATTCCAGTCTACATGGTATAGCCCAGAGTCCTGCTGGGGCTCGGTGAGGGCACCACTGTACAGGTGGACCCTCCTGCCTCTCCTGCTTGCCCACCACA
GGCAACCTTTCTGCACTGTAGCTATGGTGAACTAGCCCCCGGCTTCCCCAGCTTCCCCTCTCTGTGCCTGTGGTGCCAGGGATTACACCAAAGCCCTCAACTCCTGCCAAGCTGCTGCTGCTCCTCTG
AGCCACACCCCAGCTCTCTGAGAGGCCTAGAGGCTGTACTTTCTTTTAAAAGCAGATGCTCCAGAGAGACTGGGTGACACCTGCAGCTAGTAGCTTCGGCCTCCAAATCAGCCTGCACGGGGTAAAGA
ACATCGTTTGTCCTAATGGTTGAGTTAAGTGCTCTGGGAGCCACTGAGATCGGGATGCCAGGGGATGCCATTAGAGAAGCCAGAGATGGAGAGCAGCAGCCACAGTGTCTGAAAGGCACACTTAAATT
AGGTGGGACAGGGCCACAGAGCTGCAGTTTCTGGGGATGTGTAAACACAGCTCACCCCAGGGGTGGCCAGTAGCACCTCTGTGTTTGTCTTAAACACCCATTCTCCCATCCTGTGATGCACTCTGAAT
TTTTAATACATTCTAACATTACTGAATTTGTACTAAAATTAATGAGCCCGCCTTAGCACATGTGTATACTTGTGTGCAAGATCCTCTCACCTCTTGCTGGAGGGAGATATTTTCTTTGTTGAGCAAGC
TCAGAAGTGTGAGGAGTAACAAGACACAAGACACAGAGGGCCAGAAAGGATCCTGTGGAAACCCAATGCCACCTGAGGGAAAACTAGGGAGAGCTTAGCAGTGGCTCTCCCATTGGCTGATCTTGGAG
TGTAGGCTGTGCTGTGGGCAGCCAGGCTGAAGGAGCCCTTACACATCTTGGCTCAGGGCCAGCTGCACCACTGAGGCACTCATGTCCACTGTTGAGGTCCCCTCCTACCCCCGGAACCTCCACGAATT
TCTCTGGGTAGGCCTGAGACTGACTTGAAGACATGGCCTCTGGCTGGAGTTTGGTTTCTAAGGCTGAACTGCTGTCTCTCCTGGGAAGACATGGGGGAGCCACCATATCCACCATGCCCTGTTTATGT
CAGAGCATGCCGTTTGCCTTGGGTGGACTGGACCAGCACAAGCTGGCTTAGGTTAACAAGGTGCTTCTCAAAGTGCTATGTGGTGTCTGTCCCAGCGAGAGATGTCAGTGTGGCACTGGTAAACCCTG
TGGCTCATTGTGGAAAAGCACTTGTATTCAACTGTTACCTTGAAACTCAGATCCCAGATTCAACTGTAAGAATACTGTCTCACGGAGCAACTGTCCCGCGAGGCTGGGTTTTTCACTCATGCTGCAGT
TAGTACATCATCTCTGTGTCAATTCCTCACTCTTGAGTTAAAAGTATAAATATAAAAATCCTGCATTTTAACTGCTGTGTACTTGGGTTTCAAAGATTGTTATTAGGTGACATTGTGTAAAGTTGTAT
GGGTTTATTTATGTTCAGTGAAAGTCAAGGTAAAATGTGTATTCCTTTCTTACGTTTTCATCTGATCTCTTCACAACTTGAATAAATTTCCTGAAGAGCCCTCCTGCCGTGGACCACCAGGAACGCGA
GCTCCTGATGTTGCAATAACCAATGAAGCTTGAATATCAGTACTGTTACTCATTTCCTGACAACTGTGTTTGTTTCATTGCTCTGTCTTTTAGCTGTTCCCCTGTCCCTGTCACAGCAGAAGACTTAC
CATACACTTGACTTCTGAAGCACTGGAGGCTGTCCTCTGTATATTGACATTGAATAAACGTGTGAATGCACTGTAAA

hide sequence

RefSeq Acc Id:

XM_006240586 ⟹ XP_006240648

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,290 - 135,641,168 (+)	NCBI
mRatBN7.2	6	129,751,984 - 129,819,945 (+)	NCBI
Rnor_6.0	6	135,157,046 - 135,224,906 (+)	NCBI
Rnor_5.0	6	145,187,523 - 145,256,870 (-)	NCBI

Sequence:

show sequence

CCGAGGACGGCGCCTGCGCGGTGGGCGTGATCCGGGCACTTAGGGCAGGATGAACGCTGCTTTCCAAGATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGG
GAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGA
CCGCCTCTGCTTCAATGTGGGCCGGGAGCTCTACTTCTATATCTACAAGGGGGTCCGCAAGAGACTAATAGACAAGTCACGCGTAACCTGTGTCAAATGGGTTCCTGGTTCGGAAAGCCTTTTCCTAG
TAGCCCATTCAAGTGGGAGCATGTACTTATATAATGTGGAGCACACTTGTGGCACCACAGCCCCCCACTACCAGCTCCTGAAGCAGGGAGAGAGCTTTGCGGTGCACACTTGCAAGAGCAAATCCACG
AGGAACCCTCTCCTTAAGTGGACAGTGGGCGAGGGGGCCCTCAACGAGTTTGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGTGTGAGCCAGGACGGGTTTCTGCGTGTGTTCAACTTTGACTCAGT
GGAGCTGCACGGTACAATGAAAAGCTACTTTGGGGGCTTGCTTTGTGTGTGCTGGAGCCCAGATGGCAAGTACATTGTGACAGGTGGAGAGGACGACTTGGTGACAGTTTGGTCCTTTCTAGACTGCC
GAGTAATAGCTAGAGGCCATGGGCACAAGTCCTGGGTCAGTGTTGTAGCATTTGATCCCTATACTACTAGTGTAGAAGAAAGTGATCCTATGGAGTTTAGTGGCAGTGACGAGGACTTCCAGGACCTT
CTTCACTTTGGCAGAGATCGAGCGAACAGTACACAATCTAGGCTATCCAAACGGAACTCTACAGACAGCCGCCCTGTAAGTGTTACGTATCGGTTTGGTTCAGTGGGCCAGGATACACAGCTGTGCTT
ATGGGACCTTACAGAAGACATCCTTTTCCCTCACCAGCCCCTCTCAAGAGCAAGGACACACACAAACGTTATGAATGCCACAAGTCCGCCTGCCGGAAGCAATGGGAACAGTGTCACTACACCTGGGG
ACTCTGGGCCCCCTCCATTACCGCGGTCCAATAGCCTTCCACACTCAGCAGTCTCCAATGCTGGTAGCAAAAGCAGCGTCATGGACGGGGCCATTGCATCTGGGGTCAGCAAGTTTGCAACTTTGTCG
CTACATGACCGGAAGGAGAGACACCACGAGAAAGACCATAAACGAAATCATAGTATGGGACACATTTCCAGCAAGAGCAGTGACAAACTGAACCTAGTTACTAAAGCCAAAACGGACCCAGCTAAAAC
TCTGGGGACATCCCTGTGTCCTCGGATGGAAGATGTTCCCTTGTTAGAGCCACTGATCTGTAAAAAGATAGCTCATGAGAGACTGACGGTATTGGTTTTTCTTGAAGACTGTCTAGTCACTGCTTGTC
AGGAGGGATTTATTTGCACATGGGCAAGGCCTGGTAAAGTGGGCTTGTTGTCATCCCCAAACCAGGCCAGTTCTCCAGGTGGGACTGTAGTGTAGCAGTTACACTGCTGCTGCCGGGCTCCCCGGACA
CGCGTGGACCGAGGGAGTGACAGACGACTACGGAGCCATGAGCTGCGCTGGAGCCACAGGCAGGCGGCAGGAAGCAGCGGCCGGCAGGGCTGTGTGGAGCTGCTAAACCCAAAGAGTTGTTCCCTTTA
AAGCCAGTCTGTGGGGCTGCAGTAAGGACTGAAGTGGAGTTTCCTGCTTCTACTCTAAACTCAATGTAACTAAACCCACATATAATATATATATATATATATATATATACATATATACATAGTGTAAA
TAAGTGTTTCTCGAACAGGAAACCTTAAATCGAGCTGTTCTGAATAGCACTTGGCTCTGGTTTTGCACTGATCTGATTTATACTTTAGGTGGTCATCAGACGCCTGGGGTGCACTTGTGGAGACAGTT
GTCACCTTCTGACTTAACACGTGCTGCAGAAAGACAGATGCTGCAATCATAGACTTAAAAATCGTTTGCACTTAAAATAGTTTAATGCTAATAGACAATGACTTTAAATATGGGGGTAGCGGACTCCC
GGCCTCCACGATACGGAGTGGAGATAAAAACCCTTTTTATCTGTTAACATTTATTTTAGTACTGTTGTTTCTGATGCAATCAAGTCTGTATTATATGTGTAAATAATGTAATTCTGAAATGGGGGAAA
TAGTCACTCCCACTAGTAATTTTCATCATTTAAGAGTGATATTTCTAATTCACAAAAACATTAATATTAAAATTATCTTGAATATAC

hide sequence

RefSeq Acc Id:

XM_008764935 ⟹ XP_008763157

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,294 - 135,641,168 (+)	NCBI
mRatBN7.2	6	129,752,020 - 129,819,945 (+)	NCBI
Rnor_6.0	6	135,157,043 - 135,224,906 (+)	NCBI

Sequence:

show sequence

CGGCCGAGGACGGCGCCTGCGCGGTGGGCGTGATCCGGGCACTTAGGGCAGGATGAACGCTGCTTTCCAAGATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACC
CGGGAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGG
CGACCGCCTCTGCTTCAATGTGGGCCGGGAGCTCTACTTCTATATCTACAAGGGGGTCCGCAAGGCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCCACTTGTCATG
ACTTCAACCACCTAACAGCCACAGCAGAGAGCGTCTCTCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAGAAAGAAACCAGCAAGCTATTTAATGAGGAAGGCTTGTTG
TCATCCCCAAACCAGGCCAGTTCTCCAGGTGGGACTGTAGTGTAGCAGTTACACTGCTGCTGCCGGGCTCCCCGGACACGCGTGGACCGAGGGAGTGACAGACGACTACGGAGCCATGAGCTGCGCTG
GAGCCACAGGCAGGCGGCAGGAAGCAGCGGCCGGCAGGGCTGTGTGGAGCTGCTAAACCCAAAGAGTTGTTCCCTTTAAAGCCAGTCTGTGGGGCTGCAGTAAGGACTGAAGTGGAGTTTCCTGCTTC
TACTCTAAACTCAATGTAACTAAACCCACATATAATATATATATATATATATATATATACATATATACATAGTGTAAATAAGTGTTTCTCGAACAGGAAACCTTAAATCGAGCTGTTCTGAATAGCAC
TTGGCTCTGGTTTTGCACTGATCTGATTTATACTTTAGGTGGTCATCAGACGCCTGGGGTGCACTTGTGGAGACAGTTGTCACCTTCTGACTTAACACGTGCTGCAGAAAGACAGATGCTGCAATCAT
AGACTTAAAAATCGTTTGCACTTAAAATAGTTTAATGCTAATAGACAATGACTTTAAATATGGGGGTAGCGGACTCCCGGCCTCCACGATACGGAGTGGAGATAAAAACCCTTTTTATCTGTTAACAT
TTATTTTAGTACTGTTGTTTCTGATGCAATCAAGTCTGTATTATATGTGTAAATAATGTAATTCTGAAATGGGGGAAATAGTCACTCCCACTAGTAATTTTCATCATTTAAGAGTGATATTTCTAATT
CACAAAAACATTAATATTAAAATTATCTTGAATATAC

hide sequence

RefSeq Acc Id:

XM_017594186 ⟹ XP_017449675

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,284 - 135,635,187 (+)	NCBI
mRatBN7.2	6	129,751,976 - 129,813,967 (+)	NCBI
Rnor_6.0	6	135,157,043 - 135,218,924 (+)	NCBI

Sequence:

show sequence

CGGCCGAGGACGGCGCCTGCGCGGTGGGCGTGATCCGGGCACTTAGGGCAGGATGAACGCTGCT
TTCCAAGATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCA
ACTCGCAGGGATCCAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGCCGGGAGCTCTACTTCTATATCTACAAGGGGGTCCGCAAG
GCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCCACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAGAGCGTCTCTCTCCTAGTGGGCTTTTCCGCAGGCCA
AGTCCAGCTTATAGACCCAATCAAGAAAGAAACCAGCAAGCTATTTAATGAGGAAGGCAGAGACTCAGCCACTGGTAAGGCAGAGTGTAGGCCTGCTTGTCAAAGCCATGTAGTCTCTTTGTGTCTTC
CTCACCAGACCCTTCCCTTGCCCACCTGCCACATCATGAGAACATACTTGCGTGCCCCAGCTCTGCCTGATGTCTGGTGCTGGTACATAACACCCTCAGACGTGTGGAGAGAATGGACTGTAAGTTCT
TCATATGCGCTGCAGATAGAAAGACTAATAGACAAGTCACGCGTAACCTGTGTCAAATGGGTTCCTGGTTCGGAAAGCCTTTTCCTAGTAGCCCATTCAAGTGGGAGCATGTACTTATATAATGTGGA
GCACACTTGTGGCACCACAGCCCCCCACTACCAGCTCCTGAAGCAGGGAGAGAGCTTTGCGGTGCACACTTGCAAGAGCAAATCCACGAGGAACCCTCTCCTTAAGTGGACAGTGGGCGAGGGGGCCC
TCAACGAGTTTGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGTGTGAGCCAGGACGGGTTTCTGCGTGTGTTCAACTTTGACTCAGTGGAGCTGCACGGTACAATGAAAAGCTACTTTGGGGGCTTG
CTTTGTGTGTGCTGGAGCCCAGATGGCAAGTACATTGTGACAGGTGGAGAGGACGACTTGGTGACAGTTTGGTCCTTTCTAGACTGCCGAGTAATAGCTAGAGGCCATGGGCACAAGTCCTGGGTCAG
TGTTGTAGCATTTGATCCCTATACTACTAGTGTAGAAGAAAGTGATCCTATGGAGTTTAGTGGCAGTGACGAGGACTTCCAGGACCTTCTTCACTTTGGCAGAGATCGAGCGAACAGTACACAATCTA
GGCTATCCAAACGGAACTCTACAGACAGCCGCCCTGTAAGTGTTACGTATCGGTTTGGTTCAGTGGGCCAGGATACACAGCTGTGCTTATGGGACCTTACAGAAGACATCCTTTTCCCTCACCAGCCC
CTCTCAAGAGCAAGGACACACACAAACGTTATGAATGCCACAAGTCCGCCTGCCGGAAGCAATGGGAACAGTGTCACTACACCTGGGGACTCTGGGCCCCCTCCATTACCGCGGTCCAATAGCCTTCC
ACACTCAGCAGTCTCCAATGCTGGTAGCAAAAGCAGCGTCATGGACGGGGCCATTGCATCTGGGGTCAGCAAGTTTGCAACTTTGTCGCTACATGACCGGAAGGAGAGACACCACGAGAAAGACCATA
AACGAAATCATAGTATGGGACACATTTCCAGCAAGAGCAGTGACAAACTGAACCTAGTTACTAAAGCCAAAACGGACCCAGCTAAAACTCTGGGGACATCCCTGTGTCCTCGGATGGAAGATGTTCCC
TTGTTAGAGCCACTGATCTGTAAAAAGATAGCTCATGAGAGACTGACGGTATTGGTTTTTCTTGAAGACTGTCTAGTCACTGCTTGTCAGGAGGGATTTATTTGCACATGGGCAAGGCCTGGTAAAGT
GTCGGCAGAGCAGTTCTGCAGGCAGGAGGACAGAGTGCAAGGTGTTCTCCAAGACCAGAACTAAAGGTGCGGCAGCTCCAGAAGAGGGTGCTGGTGCTGGAGGGCGGGGCTCCTCTCCCCTTGTGCCC
TGCAAACAGAGGTGGTGGGGTGTCATGGGGTTGCAACAATTGTCATGGTGGTTCCTGATCCCCAGAGAATGAGAAACAGTGCCACTGTGCTTCCACAGTAGCCACCCAGAGAAATTTTGGGCGCATGT
TTTAGTTTTCTCAACAAACATTGAGCTTCGTCATCAAAACTTCCCTGAGCATTTCATGAGCAGGACTGTCTTTGGTAACTAGCGCCTGGAGTAAAGCAGCTTTTACCAAGAGGTTCCTACAGGCAGAA
TTCCAGTCTACATGGTATAGCCCAGAGTCCTGCTGGGGCTCGGTGAGGGCACCACTGTACAGGTGGACCCTCCTGCCTCTCCTGCTTGCCCACCACAGGCAACCTTTCTGCACTGTAGCTATGGTGAA
CTAGCCCCCGGCTTCCCCAGCTTCCCCTCTCTGTGCCTGTGGTGCCAGGGATTACACCAAAGCCCTCAACTCCTGCCAAGCTGCTGCTGCTCCTCTGAGCCACACCCCAGCTCTCTGAGAGGCCTAGA
GGCTGTACTTTCTTTTAAAAGCAGATGCTCCAGAGAGACTGGGTGACACCTGCAGCTAGTAGCTTCGGCCTCCAAATCAGCCTGCACGGGGTAAAGAACATCGTTTGTCCTAATGGTTGAGTTAAGTG
CTCTGGGAGCCACTGAGATCGGGATGCCAGGGGATGCCATTAGAGAAGCCAGAGATGGAGAGCAGCAGCCACAGTGTCTGAAAGGCACACTTAAATTAGGTGGGACAGGGCCACAGAGCTGCAGTTTC
TGGGGATGTGTAAACACAGCTCACCCCAGGGGTGGCCAGTAGCACCTCTGTGTTTGTCTTAAACACCCATTCTCCCATCCTGTGATGCACTCTGAATTTTTAATACATTCTAACATTACTGAATTTGT
ACTAAAATTAATGAGCCCGCCTTAGCACATGTGTATACTTGTGTGCAAGATCCTCTCACCTCTTGCTGGAGGGAGATATTTTCTTTGTTGAGCAAGCTCAGAAGTGTGAGGAGTAACAAGACACAAGA
CACAGAGGGCCAGAAAGGATCCTGTGGAAACCCAATGCCACCTGAGGGAAAACTAGGGAGAGCTTAGCAGTGGCTCTCCCATTGGCTGATCTTGGAGTGTAGGCTGTGCTGTGGGCAGCCAGGCTGAA
GGAGCCCTTACACATCTTGGCTCAGGGCCAGCTGCACCACTGAGGCACTCATGTCCACTGTTGAGGTCCCCTCCTACCCCCGGAACCTCCACGAATTTCTCTGGGTAGGCCTGAGACTGACTTGAAGA
CATGGCCTCTGGCTGGAGTTTGGTTTCTAAGGCTGAACTGCTGTCTCTCCTGGGAAGACATGGGGGAGCCACCATATCCACCATGCCCTGTTTATGTCAGAGCATGCCGTTTGCCTTGGGTGGACTGG
ACCAGCACAAGCTGGCTTAGGTTAACAAGGTGCTTCTCAAAGTGCTATGTGGTGTCTGTCCCAGCGAGAGATGTCAGTGTGGCACTGGTAAACCCTGTGGCTCATTGTGGAAAAGCACTTGTATTCAA
CTGTTACCTTGAAACTCAGATCCCAGATTCAACTGTAAGAATACTGTCTCACGGAGCAACTGTCCCGCGAGGCTGGGTTTTTCACTCATGCTGCAGTTAGTACATCATCTCTGTGTCAATTCCTCACT
CTTGAGTTAAAAGTATAAATATAAAAATCCTGCATTTTAACTGCTGTGTACTTGGGTTTCAAAGATTGTTATTAGGTGACATTGTGTAAAGTTGTATGGGTTTATTTATGTTCAGTGAAAGTCAAGGT
AAAATGTGTATTCCTTTCTTACGTTTTCATCTGATCTCTTCACAACTTGAATAAATTTCCTGAAGAGCCCTCCTGCCGTGGACCACCAGGAACGCGAGCTCCTGATGTTGCAATAACCAATGAAGCTT
GAATATCAGTACTGTTACTCATTTCCTGACAACTGTGTTTGTTTCATTGCTCTGTCTTTTAGCTGTTCCCCTGTCCCTGTCACAGCAGAAGACTTACCATACACTTGACTTCTGAAGCACTGGAGGCT
GTCCTCTGTATATTGACATTGAATAAACGTGTGAATGCACTGTAAA

hide sequence

RefSeq Acc Id:

XM_017594187 ⟹ XP_017449676

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,284 - 135,641,168 (+)	NCBI
mRatBN7.2	6	129,751,977 - 129,819,945 (+)	NCBI
Rnor_6.0	6	135,157,043 - 135,224,906 (+)	NCBI

Sequence:

show sequence

CGGCCGAGGACGGCGCCTGCGCGGTGGGCGTGATCCGGGCACTTAGGGCAGGATGAACGCTGCT
TTCCAAGATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCA
ACTCGCAGGGATCCAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGCCGGGAGCTCTACTTCTATATCTACAAGGGGGTCCGCAAG
GCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCCACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAGAGCGTCTCTCTCCTAGTGGGCTTTTCCGCAGGCCA
AGTCCAGCTTATAGACCCAATCAAGAAAGAAACCAGCAAGCTATTTAATGAGGAAGGCAGAGACTCAGCCACTGGTAAGGCAGAGTGTAGGCCTGCTTGTCAAAGCCATGTAGTCTCTTTGTGTCTTC
CTCACCAGACCCTTCCCTTGCCCACCTGCCACATCATGAGAACATACTTGCGTGCCCCAGCTCTGCCTGATGTCTGGTGCTGGTACATAACACCCTCAGACGTGTGGAGAGAATGGACTGTAAGTTCT
TCATATGCGCTGCAGATAGAAAGACTAATAGACAAGTCACGCGTAACCTGTGTCAAATGGGTTCCTGGTTCGGAAAGCCTTTTCCTAGTAGCCCATTCAAGTGGGAGCATGTACTTATATAATGTGGA
GCACACTTGTGGCACCACAGCCCCCCACTACCAGCTCCTGAAGCAGGGAGAGAGCTTTGCGGTGCACACTTGCAAGAGCAAATCCACGAGGAACCCTCTCCTTAAGTGGACAGTGGGCGAGGGGGCCC
TCAACGAGTTTGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGTGTGAGCCAGGACGGGTTTCTGCGTGTGTTCAACTTTGACTCAGTGGAGCTGCACGGTACAATGAAAAGCTACTTTGGGGGCTTG
CTTTGTGTGTGCTGGAGCCCAGATGGCAAGTACATTGTGACAGGTGGAGAGGACGACTTGGTGACAGTTTGGTCCTTTCTAGACTGCCGAGTAATAGCTAGAGGCCATGGGCACAAGTCCTGGGTCAG
TGTTGTAGCATTTGATCCCTATACTACTAGTGTAGAAGAAAGTGATCCTATGGAGTTTAGTGGCAGTGACGAGGACTTCCAGGACCTTCTTCACTTTGGCAGAGATCGAGCGAACAGTACACAATCTA
GGCTATCCAAACGGAACTCTACAGACAGCCGCCCTGTAAGTGTTACGTATCGGTTTGGTTCAGTGGGCCAGGATACACAGCTGTGCTTATGGGACCTTACAGAAGACATCCTTTTCCCTCACCAGCCC
CTCTCAAGAGCAAGGACACACACAAACGTTATGAATGCCACAAGTCCGCCTGCCGGAAGCAATGGGAACAGTGTCACTACACCTGGGGACTCTGGGCCCCCTCCATTACCGCGGTCCAATAGCCTTCC
ACACTCAGCAGTCTCCAATGCTGGTAGCAAAAGCAGCGTCATGGACGGGGCCATTGCATCTGGGGTCAGCAAGTTTGCAACTTTGTCGCTACATGACCGGAAGGAGAGACACCACGAGAAAGACCATA
AACGAAATCATAGTATGGGACACATTTCCAGCAAGAGCAGTGACAAACTGAACCTAGTTACTAAAGCCAAAACGGACCCAGCTAAAACTCTGGGGACATCCCTGTGTCCTCGGATGGAAGATGTTCCC
TTGTTAGAGCCACTGATCTGTAAAAAGATAGCTCATGAGAGACTGACGGTATTGGTTTTTCTTGAAGACTGTCTAGTCACTGCTTGTCAGGAGGGATTTATTTGCACATGGGCAAGGCCTGGTAAAGT
GTCGGCAGAGCAGTTCTGCAGGCAGGAGGACAGAGTGCAAGGTGTTCTCCAAGACCAGAACTAAAGGGCTTGTTGTCATCCCCAAACCAGGCCAGTTCTCCAGGTGGGACTGTAGTGTAGCAGTTACA
CTGCTGCTGCCGGGCTCCCCGGACACGCGTGGACCGAGGGAGTGACAGACGACTACGGAGCCATGAGCTGCGCTGGAGCCACAGGCAGGCGGCAGGAAGCAGCGGCCGGCAGGGCTGTGTGGAGCTGC
TAAACCCAAAGAGTTGTTCCCTTTAAAGCCAGTCTGTGGGGCTGCAGTAAGGACTGAAGTGGAGTTTCCTGCTTCTACTCTAAACTCAATGTAACTAAACCCACATATAATATATATATATATATATA
TATATACATATATACATAGTGTAAATAAGTGTTTCTCGAACAGGAAACCTTAAATCGAGCTGTTCTGAATAGCACTTGGCTCTGGTTTTGCACTGATCTGATTTATACTTTAGGTGGTCATCAGACGC
CTGGGGTGCACTTGTGGAGACAGTTGTCACCTTCTGACTTAACACGTGCTGCAGAAAGACAGATGCTGCAATCATAGACTTAAAAATCGTTTGCACTTAAAATAGTTTAATGCTAATAGACAATGACT
TTAAATATGGGGGTAGCGGACTCCCGGCCTCCACGATACGGAGTGGAGATAAAAACCCTTTTTATCTGTTAACATTTATTTTAGTACTGTTGTTTCTGATGCAATCAAGTCTGTATTATATGTGTAAA
TAATGTAATTCTGAAATGGGGGAAATAGTCACTCCCACTAGTAATTTTCATCATTTAAGAGTGATATTTCTAATTCACAAAAACATTAATATTAAAATTATCTTGAATATAC

hide sequence

RefSeq Acc Id:

XM_017594188 ⟹ XP_017449677

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,285 - 135,641,168 (+)	NCBI
mRatBN7.2	6	129,751,978 - 129,819,945 (+)	NCBI
Rnor_6.0	6	135,157,044 - 135,224,906 (+)	NCBI

Sequence:

show sequence

GGCCGAGGACGGCGCCTGCGCGGTGGGCGTGATCCGGGCACTTAGGGCAGGATGAACGCTGCTTTCCAAGATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCC
GGGAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGC
GACCGCCTCTGCTTCAATGTGGGCCGGGAGCTCTACTTCTATATCTACAAGGGGGTCCGCAAGGCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCCACTTGTCATGA
CTTCAACCACCTAACAGCCACAGCAGAGAGCGTCTCTCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAGAAAGAAACCAGCAAGCTATTTAATGAGGAAGGCAGAGACT
CAGCCACTGGTAAGGCAGAGTGTAGGCCTGCTTGTCAAAGCCATGTAGTCTCTTTGTGTCTTCCTCACCAGACCCTTCCCTTGCCCACCTGCCACATCATGAGAACATACTTGCGTGCCCCAGCTCTG
CCTGATGTCTGGTGCTGGTACATAACACCCTCAGACGTGTGGAGAGAATGGACTGTAAGTTCTTCATATGCGCTGCAGATAGAAAGACTAATAGACAAGTCACGCGTAACCTGTGTCAAATGGGTTCC
TGGTTCGGAAAGCCTTTTCCTAGTAGCCCATTCAAGTGGGAGCATGTACTTATATAATGTGGAGCACACTTGTGGCACCACAGCCCCCCACTACCAGCTCCTGAAGCAGGGAGAGAGCTTTGCGGTGC
ACACTTGCAAGAGCAAATCCACGAGGAACCCTCTCCTTAAGTGGACAGTGGGCGAGGGGGCCCTCAACGAGTTTGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGTGTGAGCCAGGACGGGTTTCTG
CGTGTGTTCAACTTTGACTCAGTGGAGCTGCACGGTACAATGAAAAGCTACTTTGGGGGCTTGCTTTGTGTGTGCTGGAGCCCAGATGGCAAGTACATTGTGACAGGTGGAGAGGACGACTTGGTGAC
AGTTTGGTCCTTTCTAGACTGCCGAGTAATAGCTAGAGGCCATGGGCACAAGTCCTGGGTCAGTGTTGTAGCATTTGATCCCTATACTACTAGTGTAGAAGAAAGTGATCCTATGGAGTTTAGTGGCA
GTGACGAGGACTTCCAGGACCTTCTTCACTTTGGCAGAGATCGAGCGAACAGTACACAATCTAGGCTATCCAAACGGAACTCTACAGACAGCCGCCCTGTAAGTGTTACGTATCGGTTTGGTTCAGTG
GGCCAGGATACACAGCTGTGCTTATGGGACCTTACAGAAGACATCCTTTTCCCTCACCAGCCCCTCTCAAGAGCAAGGACACACACAAACGTTATGAATGCCACAAGTCCGCCTGCCGGAAGCAATGG
GAACAGTGTCACTACACCTGGGGACTCTGGGCCCCCTCCATTACCGCGGTCCAATAGCCTTCCACACTCAGCAGTCTCCAATGCTGGTAGCAAAAGCAGCGTCATGGACGGGGCCATTGCATCTGGGG
TCAGCAAGTTTGCAACTTTGTCGCTACATGACCGGAAGGAGAGACACCACGAGAAAGACCATAAACGAAATCATAGTATGGGACACATTTCCAGCAAGAGCAGTGACAAACTGAACCTAGTTACTAAA
GCCAAAACGGACCCAGCTAAAACTCTGGGGACATCCCTGTGTCCTCGGATGGAAGATGTTCCCTTGTTAGAGCCACTGATCTGTAAAAAGATAGCTCATGAGAGACTGACGGTATTGGTTTTTCTTGA
AGACTGTCTAGTCACTGCTTGTCAGGAGGGATTTATTTGCACATGGGCAAGGCCTGGTAAAGTGGGCTTGTTGTCATCCCCAAACCAGGCCAGTTCTCCAGGTGGGACTGTAGTGTAGCAGTTACACT
GCTGCTGCCGGGCTCCCCGGACACGCGTGGACCGAGGGAGTGACAGACGACTACGGAGCCATGAGCTGCGCTGGAGCCACAGGCAGGCGGCAGGAAGCAGCGGCCGGCAGGGCTGTGTGGAGCTGCTA
AACCCAAAGAGTTGTTCCCTTTAAAGCCAGTCTGTGGGGCTGCAGTAAGGACTGAAGTGGAGTTTCCTGCTTCTACTCTAAACTCAATGTAACTAAACCCACATATAATATATATATATATATATATA
TATACATATATACATAGTGTAAATAAGTGTTTCTCGAACAGGAAACCTTAAATCGAGCTGTTCTGAATAGCACTTGGCTCTGGTTTTGCACTGATCTGATTTATACTTTAGGTGGTCATCAGACGCCT
GGGGTGCACTTGTGGAGACAGTTGTCACCTTCTGACTTAACACGTGCTGCAGAAAGACAGATGCTGCAATCATAGACTTAAAAATCGTTTGCACTTAAAATAGTTTAATGCTAATAGACAATGACTTT
AAATATGGGGGTAGCGGACTCCCGGCCTCCACGATACGGAGTGGAGATAAAAACCCTTTTTATCTGTTAACATTTATTTTAGTACTGTTGTTTCTGATGCAATCAAGTCTGTATTATATGTGTAAATA
ATGTAATTCTGAAATGGGGGAAATAGTCACTCCCACTAGTAATTTTCATCATTTAAGAGTGATATTTCTAATTCACAAAAACATTAATATTAAAATTATCTTGAATATAC

hide sequence

RefSeq Acc Id:

XM_039112410 ⟹ XP_038968338

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,284 - 135,635,187 (+)	NCBI
mRatBN7.2	6	129,751,977 - 129,813,967 (+)	NCBI

RefSeq Acc Id:

XM_039112411 ⟹ XP_038968339

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,284 - 135,635,187 (+)	NCBI
mRatBN7.2	6	129,751,977 - 129,813,967 (+)	NCBI

RefSeq Acc Id:

XM_039112414 ⟹ XP_038968342

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,572,502 - 135,617,940 (+)	NCBI
mRatBN7.2	6	129,751,952 - 129,795,560 (+)	NCBI

RefSeq Acc Id:

XM_039112415 ⟹ XP_038968343

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,294 - 135,617,940 (+)	NCBI
mRatBN7.2	6	129,752,021 - 129,799,133 (+)	NCBI

RefSeq Acc Id:

XM_063262014 ⟹ XP_063118084

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,282 - 135,635,187 (+)	NCBI

RefSeq Acc Id:

XM_063262015 ⟹ XP_063118085

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,284 - 135,635,187 (+)	NCBI

RefSeq Acc Id:

XM_063262016 ⟹ XP_063118086

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,286 - 135,635,187 (+)	NCBI

RefSeq Acc Id:

XM_063262017 ⟹ XP_063118087

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,287 - 135,641,168 (+)	NCBI

RefSeq Acc Id:

XM_063262018 ⟹ XP_063118088

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,287 - 135,635,187 (+)	NCBI

RefSeq Acc Id:

XM_063262019 ⟹ XP_063118089

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,293 - 135,635,187 (+)	NCBI

RefSeq Acc Id:

XM_063262020 ⟹ XP_063118090

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,289 - 135,635,187 (+)	NCBI

RefSeq Acc Id:

XM_063262021 ⟹ XP_063118091

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,286 - 135,635,187 (+)	NCBI

RefSeq Acc Id:

XM_063262022 ⟹ XP_063118092

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,289 - 135,635,187 (+)	NCBI

RefSeq Acc Id:

XM_063262023 ⟹ XP_063118093

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,293 - 135,620,557 (+)	NCBI

RefSeq Acc Id:

XR_005505530

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	135,573,293 - 135,629,392 (+)	NCBI
mRatBN7.2	6	129,752,012 - 129,808,165 (+)	NCBI


Protein RefSeqs	NP_001094364	(Get FASTA)	NCBI Sequence Viewer
	XP_006240645	(Get FASTA)	NCBI Sequence Viewer
	XP_006240648	(Get FASTA)	NCBI Sequence Viewer
	XP_008763157	(Get FASTA)	NCBI Sequence Viewer
	XP_017449675	(Get FASTA)	NCBI Sequence Viewer
	XP_017449676	(Get FASTA)	NCBI Sequence Viewer
	XP_017449677	(Get FASTA)	NCBI Sequence Viewer
	XP_038968338	(Get FASTA)	NCBI Sequence Viewer
	XP_038968339	(Get FASTA)	NCBI Sequence Viewer
	XP_038968342	(Get FASTA)	NCBI Sequence Viewer
	XP_038968343	(Get FASTA)	NCBI Sequence Viewer
	XP_063118084	(Get FASTA)	NCBI Sequence Viewer
	XP_063118085	(Get FASTA)	NCBI Sequence Viewer
	XP_063118086	(Get FASTA)	NCBI Sequence Viewer
	XP_063118087	(Get FASTA)	NCBI Sequence Viewer
	XP_063118088	(Get FASTA)	NCBI Sequence Viewer
	XP_063118089	(Get FASTA)	NCBI Sequence Viewer
	XP_063118090	(Get FASTA)	NCBI Sequence Viewer
	XP_063118091	(Get FASTA)	NCBI Sequence Viewer
	XP_063118092	(Get FASTA)	NCBI Sequence Viewer
	XP_063118093	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH91299	(Get FASTA)	NCBI Sequence Viewer
	EDL97500	(Get FASTA)	NCBI Sequence Viewer
	EDL97501	(Get FASTA)	NCBI Sequence Viewer
	EDL97502	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009709
	ENSRNOP00000009709.5
	ENSRNOP00000072178
	ENSRNOP00000072178.2
	ENSRNOP00000077142.1
	ENSRNOP00000083213
	ENSRNOP00000083213.1
	ENSRNOP00000083245.1
	ENSRNOP00000085763.1
	ENSRNOP00000087682
	ENSRNOP00000087682.1
	ENSRNOP00000094139.1

RefSeq Acc Id:

NP_001094364 ⟸ NM_001100894

- UniProtKB:

D3ZVJ9 (UniProtKB/TrEMBL), A0A0G2K2B7 (UniProtKB/TrEMBL), A6KBN0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQ
LIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGSMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHG
TMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGHGHKSWVSVVAFDPYTTSVEESDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLT
EDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTTPGDSGPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKAKTDPAKTLGTS
LCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCLVTACQEGFICTWARPGKVGLLSSPNQASSPGGTVV

hide sequence

RefSeq Acc Id:	XP_006240648 ⟸ XM_006240586
- Peptide Label:	isoform X13
- UniProtKB:	A0A8I6G8P3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKRLIDKSRVTCVKWVPGSESLFLVAHSSGSMYLYNVEHTCGTTAPH YQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGHGHKSWVSVVAFDPYTT SVEESDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTTPGDSGPPPLPRSNSLPHSAVSNAGS KSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCLVTACQEGFICTWARPGKVGLLSSPNQA SSPGGTVV hide sequence

RefSeq Acc Id:	XP_006240645 ⟸ XM_006240583
- Peptide Label:	isoform X10
- UniProtKB:	A0A0G2K2B7 (UniProtKB/TrEMBL), A0A8I6A891 (UniProtKB/TrEMBL), A6KBN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDR LCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGSMYLYNVEHTCGTTAPHYQL LKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGHGHKSWVSVVAFDPYTTSVE ESDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTTPGDSGPPPLPRSNSLPHSAVSNAGSKSS VMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCLVTACQEGFICTWARPGKVSAEQFCRQEDRV QGVLQDQN hide sequence

RefSeq Acc Id:	XP_008763157 ⟸ XM_008764935
- Peptide Label:	isoform X16
- UniProtKB:	A0A8I5ZK85 (UniProtKB/TrEMBL), A0A8I6A274 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDR LCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEEGLLSSPNQASSPGGTVV hide sequence

RefSeq Acc Id:	XP_017449676 ⟸ XM_017594187
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K2B7 (UniProtKB/TrEMBL), A6KBN0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQ LIDPIKKETSKLFNEEGRDSATGKAECRPACQSHVVSLCLPHQTLPLPTCHIMRTYLRAPALPDVWCWYITPSDVWREWTVSSSYALQIERLIDKSRVTCVKWVPGSESLFLVAHSSGSMYLYNVEHT CGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGHGHKSWVSVV AFDPYTTSVEESDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTTPGDSGPPPLPRSNSLPHS AVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCLVTACQEGFICTWARPGKVSA EQFCRQEDRVQGVLQDQN hide sequence

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K2B7-F1-model_v2	AlphaFold	A0A0G2K2B7	1-584	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13694833

Promoter ID:

EPDNEW_R5355

Type:

multiple initiation site

Name:

Wdr20_1

Description:

WD repeat domain 20

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	135,157,104 - 135,157,164	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-35870	BioCyc
Ensembl Genes	ENSRNOG00000007333	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000009709	ENTREZGENE
	ENSRNOT00000009709.8	UniProtKB/TrEMBL
	ENSRNOT00000082595	ENTREZGENE
	ENSRNOT00000082595.2	UniProtKB/TrEMBL
	ENSRNOT00000099617.1	UniProtKB/TrEMBL
	ENSRNOT00000105069.1	UniProtKB/TrEMBL
	ENSRNOT00000106359.1	UniProtKB/TrEMBL
	ENSRNOT00000114885	ENTREZGENE
	ENSRNOT00000114885.1	UniProtKB/TrEMBL
	ENSRNOT00000115600.1	UniProtKB/TrEMBL
	ENSRNOT00000118053	ENTREZGENE
	ENSRNOT00000118053.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7309351	IMAGE-MGC_LOAD
InterPro	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
	WD_repeat_creC_regulators	UniProtKB/TrEMBL
KEGG Report	rno:314453	UniProtKB/TrEMBL
MGC_CLONE	MGC:109230	IMAGE-MGC_LOAD
NCBI Gene	314453	ENTREZGENE
PANTHER	WD REPEAT PROTEIN	UniProtKB/TrEMBL
	WD REPEAT-CONTAINING PROTEIN 20	UniProtKB/TrEMBL
Pfam	WD40	UniProtKB/TrEMBL
PhenoGen	Wdr20	PhenoGen
PROSITE	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000007333	RatGTEx
SMART	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	WD40_like	UniProtKB/TrEMBL
UniProt	A0A0G2K2B7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZK85	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZWH6_RAT	UniProtKB/TrEMBL
	A0A8I6A274	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A891	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AK72	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6G8P3	ENTREZGENE, UniProtKB/TrEMBL
	A6KBM9_RAT	UniProtKB/TrEMBL
	A6KBN0	ENTREZGENE, UniProtKB/TrEMBL
	A6KBN1_RAT	UniProtKB/TrEMBL
	D3ZVJ9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-03-04	Wdr20	WD repeat domain 20	Wdr20a	WD repeat domain 20a	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-04	Wdr20a	WD repeat domain 20a	Wdr20	WD repeat domain 20	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Wdr20	WD repeat domain 20	Wdr20_predicted	WD repeat domain 20 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Wdr20_predicted	WD repeat domain 20 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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