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Gene: Bcdin3d (BCDIN3 domain containing RNA methyltransferase) Rattus norvegicus
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Symbol: Bcdin3d
Name: BCDIN3 domain containing RNA methyltransferase
RGD ID: 1306433
Description: Predicted to have O-methyltransferase activity and tRNA methyltransferase activity. Predicted to be involved in miRNA 2'-O-methylation; negative regulation of pre-miRNA processing; and tRNA methylation. Predicted to localize to cytosol and nucleoplasm. Orthologous to human BCDIN3D (BCDIN3 domain containing RNA methyltransferase); INTERACTS WITH acrylamide; bisphenol A; vinclozolin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: BCDIN3 domain containing; BCDIN3 domain containing RNA methyltransfease; BCDIN3 domain-containing protein; LOC363001; pre-miRNA 5'-monophosphate methyltransferase; probable methyltransferase BCDIN3D; RGD1306433; RNA 5'-monophosphate methyltransferase; similar to RIKEN cDNA 4930556P03
Orthologs:
Homo sapiens (human) : BCDIN3D (BCDIN3 domain containing RNA methyltransferase)  HGNC  Alliance
Mus musculus (house mouse) : Bcdin3d (BCDIN3 domain containing)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Bcdin3d (BCDIN3 domain containing RNA methyltransferase)
Pan paniscus (bonobo/pygmy chimpanzee) : BCDIN3D (BCDIN3 domain containing RNA methyltransferase)
Canis lupus familiaris (dog) : BCDIN3D (BCDIN3 domain containing RNA methyltransferase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Bcdin3d (BCDIN3 domain containing RNA methyltransferase)
Sus scrofa (pig) : BCDIN3D (BCDIN3 domain containing RNA methyltransferase)
Chlorocebus sabaeus (African green monkey) : BCDIN3D (BCDIN3 domain containing RNA methyltransferase)
Heterocephalus glaber (naked mole-rat) : Bcdin3d (BCDIN3 domain containing RNA methyltransferase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07141,132,106 - 141,136,700 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7141,132,133 - 141,136,700 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X115,635,386 - 115,639,979 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47138,218,542 - 138,223,136 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17138,295,005 - 138,299,552 (-)NCBI
Celera7127,087,893 - 127,092,463 (-)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Bcdin3d
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306433
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.