Symbol:
Lmf2
Name:
lipase maturation factor 2
RGD ID:
1306274
Description:
Predicted to be involved in protein maturation. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human LMF2 (lipase maturation factor 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; coumarin.
Type:
protein-coding (Ensembl: pseudogene)
RefSeq Status:
PROVISIONAL
Previously known as:
LOC315218; RGD1306274; similar to hypothetical protein BC002942; Tmem112b; transmembrane protein 112B
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
LMF2 (lipase maturation factor 2)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Lmf2 (lipase maturation factor 2)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Lmf2 (lipase maturation factor 2)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
LMF2 (lipase maturation factor 2)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
LMF2 (lipase maturation factor 2)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Lmf2 (lipase maturation factor 2)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
LMF2 (lipase maturation factor 2)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
LMF2 (lipase maturation factor 2)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Lmf2 (lipase maturation factor 2)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
SLC25A45 (solute carrier family 25 member 45)
HGNC
OMA
Alliance orthologs 3
Mus musculus (house mouse):
Lmf2 (lipase maturation factor 2)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
LMF2 (lipase maturation factor 2)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
lmf2b (lipase maturation factor 2b)
Alliance
DIOPT (Ensembl Compara|OrthoFinder|PANTHER)
Danio rerio (zebrafish):
lmf2a (lipase maturation factor 2a)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
K11G12.6
Alliance
DIOPT (Ensembl Compara|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
lmf2
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 122,297,971 - 122,302,423 (-) NCBI GRCr8 mRatBN7.2 7 120,418,343 - 120,422,825 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 120,418,345 - 120,422,823 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 7 122,169,034 - 122,173,490 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 7 124,395,189 - 124,399,644 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 7 124,357,860 - 124,362,311 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 7 130,322,018 - 130,326,470 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 130,322,020 - 130,326,470 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 130,007,319 - 130,011,771 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 127,646,134 - 127,650,588 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 7 127,680,363 - 127,684,818 (-) NCBI Celera 7 116,892,158 - 116,895,843 (-) NCBI Celera Cytogenetic Map 7 q34 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Lmf2 Rat 1,2-dimethylhydrazine multiple interactions ISO RGD:1314800 6480464 Folic Acid inhibits the reaction [1,2-Dimethylhydrazine results in increased expression of LMF2 mRNA] CTD PMID:22206623 Lmf2 Rat 1,2-dimethylhydrazine increases expression ISO RGD:1314800 6480464 1,2-Dimethylhydrazine results in increased expression of LMF2 mRNA CTD PMID:22206623 Lmf2 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of LMF2 mRNA CTD PMID:21215274 Lmf2 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of LMF2 mRNA CTD PMID:33387578|PMID:34747641 Lmf2 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO RGD:1314800 6480464 Tetrachlorodibenzodioxin affects the expression of LMF2 mRNA CTD PMID:21570461 Lmf2 Rat 4,4'-sulfonyldiphenol decreases expression ISO RGD:1314800 6480464 bisphenol S results in decreased expression of LMF2 mRNA CTD PMID:39298647 Lmf2 Rat aristolochic acid A decreases expression ISO RGD:1606481 6480464 aristolochic acid I results in decreased expression of LMF2 protein CTD PMID:33212167 Lmf2 Rat arsane multiple interactions ISO RGD:1606481 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Lmf2 Rat arsenic atom multiple interactions ISO RGD:1606481 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Lmf2 Rat benzo[a]pyrene multiple interactions ISO RGD:1314800 6480464 Benzo(a)pyrene promotes the reaction [AHR protein binds to LMF2 promoter] CTD PMID:19654925 Lmf2 Rat benzo[a]pyrene increases expression ISO RGD:1314800 6480464 Benzo(a)pyrene results in increased expression of LMF2 mRNA CTD PMID:22228805 Lmf2 Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of LMF2 mRNA CTD PMID:25181051 Lmf2 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of LMF2 mRNA CTD PMID:30816183|PMID:34947998 Lmf2 Rat bisphenol A decreases expression ISO RGD:1606481 6480464 bisphenol A results in decreased expression of LMF2 mRNA CTD PMID:29275510 Lmf2 Rat bisphenol A increases methylation EXP 6480464 bisphenol A results in increased methylation of LMF2 gene CTD PMID:28505145 Lmf2 Rat butan-1-ol multiple interactions ISO RGD:1606481 6480464 [[Gasoline co-treated with 1-Butanol] results in increased abundance of [Particulate Matter co-treated with Polycyclic Aromatic more ... CTD PMID:29432896 Lmf2 Rat CGP 52608 multiple interactions ISO RGD:1606481 6480464 CGP 52608 promotes the reaction [RORA protein binds to LMF2 gene] CTD PMID:28238834 Lmf2 Rat coumarin increases expression EXP 6480464 coumarin results in increased expression of LMF2 mRNA CTD PMID:18480146 Lmf2 Rat Cuprizon increases expression EXP 6480464 Cuprizone results in increased expression of LMF2 mRNA CTD PMID:26577399 Lmf2 Rat dioxygen multiple interactions ISO RGD:1314800 6480464 [sulforaphane affects the susceptibility to Oxygen] which affects the expression of LMF2 mRNA CTD PMID:30529165 Lmf2 Rat finasteride increases expression EXP 6480464 Finasteride results in increased expression of LMF2 mRNA CTD PMID:24136188 Lmf2 Rat folic acid multiple interactions ISO RGD:1314800 6480464 Folic Acid inhibits the reaction [1,2-Dimethylhydrazine results in increased expression of LMF2 mRNA] CTD PMID:22206623 Lmf2 Rat glyphosate increases methylation EXP 6480464 Glyphosate results in increased methylation of LMF2 gene CTD PMID:31011160 Lmf2 Rat ivermectin decreases expression ISO RGD:1606481 6480464 Ivermectin results in decreased expression of LMF2 protein CTD PMID:32959892 Lmf2 Rat manganese atom multiple interactions ISO RGD:1606481 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Lmf2 Rat manganese(0) multiple interactions ISO RGD:1606481 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Lmf2 Rat manganese(II) chloride multiple interactions ISO RGD:1606481 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Lmf2 Rat methamphetamine increases expression ISO RGD:1314800 6480464 Methamphetamine results in increased expression of LMF2 mRNA CTD PMID:26307267 Lmf2 Rat ozone multiple interactions ISO RGD:1606481 6480464 [Air Pollutants results in increased abundance of Ozone] which affects the expression of LMF2 mRNA CTD PMID:35430440 Lmf2 Rat paracetamol affects expression ISO RGD:1314800 6480464 Acetaminophen affects the expression of LMF2 mRNA CTD PMID:17562736 Lmf2 Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of LMF2 mRNA CTD PMID:33387578 Lmf2 Rat pentachlorophenol increases expression ISO RGD:1314800 6480464 Pentachlorophenol results in increased expression of LMF2 mRNA CTD PMID:23892564 Lmf2 Rat perfluorooctanoic acid decreases expression ISO RGD:1606481 6480464 perfluorooctanoic acid results in decreased expression of LMF2 protein CTD PMID:26879310 Lmf2 Rat pirinixic acid increases expression ISO RGD:1314800 6480464 pirinixic acid results in increased expression of LMF2 mRNA CTD PMID:23811191 Lmf2 Rat resveratrol increases expression ISO RGD:1314800 6480464 resveratrol results in increased expression of LMF2 protein CTD PMID:25505154 Lmf2 Rat rotenone increases expression EXP 6480464 Rotenone results in increased expression of LMF2 mRNA CTD PMID:28374803 Lmf2 Rat sodium arsenite increases expression ISO RGD:1606481 6480464 sodium arsenite results in increased expression of LMF2 mRNA CTD PMID:38568856 Lmf2 Rat sodium arsenite multiple interactions ISO RGD:1606481 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:33939924|PMID:39836092 Lmf2 Rat Soman increases expression EXP 6480464 Soman results in increased expression of LMF2 mRNA CTD PMID:19281266 Lmf2 Rat sulforaphane multiple interactions ISO RGD:1314800 6480464 [sulforaphane affects the susceptibility to Oxygen] which affects the expression of LMF2 mRNA CTD PMID:30529165 Lmf2 Rat sulindac decreases expression EXP 6480464 Sulindac results in decreased expression of LMF2 mRNA CTD PMID:24136188 Lmf2 Rat temozolomide decreases expression ISO RGD:1606481 6480464 Temozolomide results in decreased expression of LMF2 mRNA CTD PMID:31758290 Lmf2 Rat thapsigargin increases expression EXP 6480464 Thapsigargin results in increased expression of LMF2 protein CTD PMID:35544339 Lmf2 Rat titanium dioxide decreases methylation ISO RGD:1314800 6480464 titanium dioxide results in decreased methylation of LMF2 gene CTD PMID:35295148 Lmf2 Rat triphenyl phosphate affects expression ISO RGD:1606481 6480464 triphenyl phosphate affects the expression of LMF2 mRNA CTD PMID:37042841 Lmf2 Rat valproic acid increases methylation ISO RGD:1606481 6480464 Valproic Acid results in increased methylation of LMF2 gene CTD PMID:29154799 Lmf2 Rat vinclozolin increases expression EXP 6480464 vinclozolin results in increased expression of LMF2 mRNA CTD PMID:23034163
Lmf2 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 122,297,971 - 122,302,423 (-) NCBI GRCr8 mRatBN7.2 7 120,418,343 - 120,422,825 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 120,418,345 - 120,422,823 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 7 122,169,034 - 122,173,490 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 7 124,395,189 - 124,399,644 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 7 124,357,860 - 124,362,311 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 7 130,322,018 - 130,326,470 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 130,322,020 - 130,326,470 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 130,007,319 - 130,011,771 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 127,646,134 - 127,650,588 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 7 127,680,363 - 127,684,818 (-) NCBI Celera 7 116,892,158 - 116,895,843 (-) NCBI Celera Cytogenetic Map 7 q34 NCBI
LMF2 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 22 50,502,949 - 50,507,702 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 22 50,502,949 - 50,507,702 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 22 50,941,378 - 50,946,131 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 22 49,288,246 - 49,292,979 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 22 34,817,402 - 34,822,161 (-) NCBI Celera Cytogenetic Map 22 q13.33 NCBI HuRef 22 33,832,434 - 33,837,266 (-) NCBI HuRef CHM1_1 22 50,900,119 - 50,904,701 (-) NCBI CHM1_1 T2T-CHM13v2.0 22 51,013,236 - 51,018,273 (-) NCBI T2T-CHM13v2.0
Lmf2 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 15 89,235,203 - 89,239,860 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 15 89,235,207 - 89,239,862 (-) Ensembl GRCm39 Ensembl GRCm38 15 89,351,004 - 89,355,694 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 15 89,351,004 - 89,355,659 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 15 89,181,435 - 89,186,090 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 15 89,178,775 - 89,183,251 (-) NCBI MGSCv36 mm8 Celera 15 91,480,143 - 91,484,798 (-) NCBI Celera Cytogenetic Map 15 E3 NCBI cM Map 15 44.84 NCBI
Lmf2 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955413 33,487,917 - 33,492,033 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955413 33,487,970 - 33,492,033 (-) NCBI ChiLan1.0 ChiLan1.0
LMF2 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 23 60,423,350 - 60,428,168 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 22 63,113,790 - 63,118,967 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 22 30,749,448 - 30,754,616 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 22 49,859,550 - 49,864,265 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 22 49,859,550 - 49,864,237 (-) Ensembl panpan1.1 panPan2
LMF2 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 10 16,802,110 - 16,806,471 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 10 16,801,342 - 16,806,020 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 10 16,779,795 - 16,784,171 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 10 17,528,304 - 17,531,440 (+) NCBI ROS_Cfam_1.0 UMICH_Zoey_3.1 10 17,252,845 - 17,257,220 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 10 17,575,862 - 17,580,230 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 10 17,708,089 - 17,712,466 (+) NCBI UU_Cfam_GSD_1.0
Lmf2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
LMF2 (Sus scrofa - pig)
LMF2 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 19 32,973,979 - 32,978,433 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 19 32,974,420 - 32,978,374 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666045 92,362,295 - 92,366,843 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Lmf2 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 75 Count of miRNA genes: 68 Interacting mature miRNAs: 73 Transcripts: ENSRNOT00000049538 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1300179 Kidm5 Kidney mass QTL 5 3.51 kidney mass (VT:0002707) left kidney wet weight (CMO:0000083) 7 43747012 135012528 Rat 1354582 Stl11 Serum triglyceride level QTL 11 3.42 blood triglyceride amount (VT:0002644) serum triglyceride level (CMO:0000360) 7 119513385 135012528 Rat 1300112 Bp183 Blood pressure QTL 183 3.51 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 7 111182207 135012528 Rat 1331728 Bp214 Blood pressure QTL 214 2.825 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 80221299 124373579 Rat 1331731 Bp216 Blood pressure QTL 216 2.851 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 102297359 133492884 Rat 2298475 Eau6 Experimental allergic uveoretinitis QTL 6 0.0029 uvea integrity trait (VT:0010551) experimental autoimmune uveitis score (CMO:0001504) 7 84257275 129257275 Rat 71114 Niddm14 Non-insulin dependent diabetes mellitus QTL 14 4.5 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) 7 84257275 129257275 Rat 631687 Hcas1 Hepatocarcinoma susceptibility QTL 1 3.9 0.001 liver integrity trait (VT:0010547) liver tumorous lesion volume to total liver volume ratio (CMO:0001082) 7 91412594 129807172 Rat 1357339 Stl14 Serum triglyceride level QTL 14 3.45 0.0001 blood triglyceride amount (VT:0002644) serum triglyceride level (CMO:0000360) 7 112729683 133492707 Rat 634331 Pia17 Pristane induced arthritis QTL 17 4.7 joint integrity trait (VT:0010548) arthritic paw count (CMO:0001460) 7 73829340 130221005 Rat 1358914 Bp266 Blood pressure QTL 266 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 83591953 134666232 Rat 634322 Bw12 Body weight QTL 12 0 body mass (VT:0001259) body weight (CMO:0000012) 7 83153392 128153392 Rat 70173 Niddm19 Non-insulin dependent diabetes mellitus QTL 19 4.33 0.00005 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 7 64002457 135012528 Rat 1549899 Stresp8 Stress response QTL 8 4.37 0.0008 stress-related behavior trait (VT:0010451) defensive burying duration (CMO:0001961) 7 90482196 135012528 Rat 2317052 Aia17 Adjuvant induced arthritis QTL 17 2.13 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 7 81737938 126737938 Rat 731176 Glom5 Glomerulus QTL 5 2.5 0.0035 kidney glomerulus morphology trait (VT:0005325) count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002) 7 96670164 135012528 Rat 7411607 Foco15 Food consumption QTL 15 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 7 75918751 120918751 Rat 2306821 Bp335 Blood pressure QTL 335 0.001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 7 106571501 135012528 Rat 631663 Bw6 Body weight QTL 6 3.4 body mass (VT:0001259) body weight (CMO:0000012) 7 111075573 134976056 Rat 1558655 Swd4 Spike wave discharge measurement QTL 4 3.68 0.0002 brain electrophysiology trait (VT:0010557) brain spike-and-wave discharge severity grade (CMO:0001988) 7 86983365 131983365 Rat 631201 Panci1 Pancreas inflammation QTL 1 0 0.001 pancreas integrity trait (VT:0010560) percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214) 7 116677189 127103496 Rat 1331768 Kidm10 Kidney mass QTL 10 4.62096 kidney mass (VT:0002707) left kidney wet weight (CMO:0000083) 7 80221299 125221299 Rat 731174 Uae23 Urinary albumin excretion QTL 23 2.4 0.0042 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 7 104603555 135012528 Rat 1331748 Bp215 Blood pressure QTL 215 4.043 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 112308254 133492884 Rat 7411654 Foco25 Food consumption QTL 25 9.3 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 7 75918751 120918751 Rat 2299163 Iddm34 Insulin dependent diabetes mellitus QTL 34 2.71 blood glucose amount (VT:0000188) age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140) 7 91281130 135012528 Rat 1582240 Sffal1 Serum free fatty acids level QTL 1 3.4 0.0021 blood free fatty acid amount (VT:0001553) serum free fatty acids level (CMO:0000547) 7 116677010 124049952 Rat 1358891 Bp265 Blood pressure QTL 265 2.21 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 83591953 134666232 Rat
RH133077
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 7 120,418,599 - 120,418,798 (+) MAPPER mRatBN7.2 Rnor_6.0 7 130,322,275 - 130,322,473 NCBI Rnor6.0 Rnor_5.0 7 130,007,576 - 130,007,774 UniSTS Rnor5.0 RGSC_v3.4 7 127,646,391 - 127,646,589 UniSTS RGSC3.4 Celera 7 116,892,413 - 116,892,611 UniSTS RH 3.4 Map 7 958.3 UniSTS Cytogenetic Map 7 q34 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000049538 ⟹ ENSRNOP00000051363
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 120,418,345 - 120,422,823 (-) Ensembl Rnor_6.0 Ensembl 7 130,322,020 - 130,326,470 (-) Ensembl
RefSeq Acc Id:
NM_001079939 ⟹ NP_001073408
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 122,297,971 - 122,302,423 (-) NCBI mRatBN7.2 7 120,418,343 - 120,422,795 (-) NCBI Rnor_6.0 7 130,322,018 - 130,326,470 (-) NCBI Rnor_5.0 7 130,007,319 - 130,011,771 (-) NCBI RGSC_v3.4 7 127,646,134 - 127,650,588 (-) RGD Celera 7 116,892,158 - 116,895,843 (-) RGD
Sequence:
CAAGTATCTTGGCCGATTATTGATGAGTTCCTAGGCACTCGGTGGAGCTCAGTGACTGGAAGGATTCCGGGTGGGGCGTGGGCCAGAGGCGGGACTGGGGGCGGGTGGGAAACCAGAGGGCACTGTTT CAGCAGGCCGTGTAGCGGACATGGCTAGCGCCAGGGTTCCACAGCAGCTTTTCCTACAGGGTGTGGCCGCTGTCTACTTGTTCGCCTTTGCGTCCCTCTACACCCAGATCCCAGGCCTCTATGGCCCA GAGGGCATCCTTCCTGCTCGAAGAACGCTGCGGCCCCAAGGCAAGGGTCGGTGGCAGCAGCTGTGGGAAACACCAACAATTCTGTGGGAGGCACCAAGACTGGGGCTGGATACTGCACAGGGCCTGGA TTTACTGACCTTACTGGGCACCGTGCTAGCCCTGGGTGCCCTGCTCCTGAACTCCCTGCGACACCCCTTCATCTACCTGCTGCTCTGGGCTGCCTACCTATCAGCCTGCCAGGTGGGCCAAGTGTTCC TTTATTTCCAGTGGGATTCCCTGCTGCTGGAGACAGGCTTCCTGGCTATTCTGGTAGCCCCCCTGAGGCGGCCTTCCAAACACAAGATTCCCCAGGGTGGATTAGCAGGAGCCTTACCCCATGAAGAC CTCCCATTCTGGCTTGTACGCTGGCTGCTCTTCCGACTCATGTTCGCCTCTGGTGTGGTCAAGCTGACCAGCCGCTGCCCTGCGTGGTGGGGACTCACTGCTCTGACCTACCACTATGAGACACAGTG CCTGCCCACACCAGCTGCCTGGTTTGCCCACCACCTGCCAGTCTGGCTGCACAGGCTCAGCGTGGTGGCCACCTTCCTCATCGAGATTGCGGTGCCACCCCTGTTCTTTGCCCCCATTCGCCGCCTAC GACTGTCCGCCTTCTATGCTCAGGCCTTACTGCAAATCCTGATTATCATTACGGGTAACTACAATTTCTTCAACCTGCTAACCTTGGTGCTCACCACTGCCCTCCTGGATGACCGTCACCTGTCCGCT GAGCCCGAACTCAGATGCCACAAGAAGATGCCCACCTCCTGGCCCAAGACCCTGCTGACCTCGCTGTCCTTAATGCTGGAACTGACCGTCTATGGGCTGCTGGCCTACGGCACCATCTACTACTTTGG GCTGGAGGTCGACTGGCAGCAGCAAATCGTTCTCTCTAAAACCACTTTCACGTTCCATCAGTTCTCCCAGTGGCTGAAGATGGTCACCCTGCCAACTGTGTGGCTGGGGACAGCCTCCCTAGCCTGGG AGCTGCTTATTGCCCTCTGGAGGTGGATCCAGGTACAAGGATGGTCACGGAAGTTCTTTGCGGGTATCCAGCTCTCAGTCCTGGGCACTGCTACAGTGTTCTTGTTCCTGATCAGCCTGGTGCCTTAC TCCTATGTGGAGCCTGGGACCCACGGTCGTCTCTGGACTGGGGCTCATCGCCTGTTCAGTTCTGTGGAGCACCTGCAGCTGGCCAACTCTTACGGCCTTTTCCGTCGGATGACTGGCCTGGGGGGGCG ACCTGAAGTGGTGCTAGAGGGCAGCCATGATGGACACCATTGGACAGAGATTGAATTCATGTACAAACCTGGGAATGTGAGCCGACCACCCCCTTTCCTGATTCCTCACCAGCCGCGCCTTGATTGGC AGATGTGGTTTGCAGCCCTTGGCCCACATACACACAGCCCCTGGTTCACCAGCCTGGTGCTGCGCCTCCTGCAGGGCAAGGAGCCAGTGATCCGACTGATCCAGAACCAGGTTGCCAACTACCCCTTT CGTGAGCAGCCACCCACCTACCTGCGGGCCCAGCGCTATAAGTACTGGTTCTCAAAGCCTGGGGATCAGAGCCGCTGGTGGCACCGCCAGTGGGTAGAGGAATTCTTCCCATCTGTATCCTTGGGGGA CCCAACCCTGGAGACACTGCTCCAACAGTTTGGACTAAAGGATAAGAGTCCACCCCGGGCCCGCAGCTCCAAAAATGCCCTTGCTCAGACACTGAACTGGGTGCGGGCACAGCTGTCTCCTCTGGAGC CTTCTATCCTGCTATGGGGACTCTTAGGGGCAGTGGTGGCTATCCGAGTTGTGCGGACCCTACTCACCCCCCGCCCGCTCCAGTCCTCAAAACAGACTAGAGAGGAAAAACGTAAGCAGGCTCCCAAG AAGGACTCCAGAGCTGTCTCTGAGCAGACTGCCCCCAACAGCAACAGCAATGGCTCCTGGGCCCCTCGGCGGAAAAAATAGCTTCATGTGCAATCAGCCAGACATATGTCCTGGTAAAGTCAGAGCCC CAGGATCCCAGCCCCTACCATGACACAGCCCAGCCACTGTGCCTTAGCCAGTCCTGCCAGGGCAGATACAGACTGGAATGCCACCCCTGAGGATTGCTAGGTGTCACCTTGAGAGTCCTGCTCATCCC TCTACACCAACCACATCCTTCGCTAGTCACCTTCTACTCTCTTGGCAACCAACCCAGAGTGGGCCTGTGGCCTCGCTCAGGGCTCTTCCTGGAACACTGTAATCAGTGTACCCACAGATGCAAAGGCC TGAATCTGGAACTCCAACCCATCCCCACTGTGGAGAGGGCGAGCTAAACCTGCTGAGGACAGGAGCCAGGGGAAGTGGGTCCGAGAGAAGGTGCCTGCCTGCCTGCCTGCCTGCCCCTCCGACTGCAC CAATAAAGGCCCCATTTTTACATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
hide sequence
RefSeq Acc Id:
NP_001073408 ⟸ NM_001079939
- UniProtKB:
Q5I0G9 (UniProtKB/Swiss-Prot), A1L1J9 (UniProtKB/Swiss-Prot)
- Sequence:
MASARVPQQLFLQGVAAVYLFAFASLYTQIPGLYGPEGILPARRTLRPQGKGRWQQLWETPTILWEAPRLGLDTAQGLDLLTLLGTVLALGALLLNSLRHPFIYLLLWAAYLSACQVGQVFLYFQWDS LLLETGFLAILVAPLRRPSKHKIPQGGLAGALPHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHRLSVVATFLIEIAVPPLFFAPIRRLRLSAFYA QALLQILIIITGNYNFFNLLTLVLTTALLDDRHLSAEPELRCHKKMPTSWPKTLLTSLSLMLELTVYGLLAYGTIYYFGLEVDWQQQIVLSKTTFTFHQFSQWLKMVTLPTVWLGTASLAWELLIALW RWIQVQGWSRKFFAGIQLSVLGTATVFLFLISLVPYSYVEPGTHGRLWTGAHRLFSSVEHLQLANSYGLFRRMTGLGGRPEVVLEGSHDGHHWTEIEFMYKPGNVSRPPPFLIPHQPRLDWQMWFAAL GPHTHSPWFTSLVLRLLQGKEPVIRLIQNQVANYPFREQPPTYLRAQRYKYWFSKPGDQSRWWHRQWVEEFFPSVSLGDPTLETLLQQFGLKDKSPPRARSSKNALAQTLNWVRAQLSPLEPSILLWG LLGAVVAIRVVRTLLTPRPLQSSKQTREEKRKQAPKKDSRAVSEQTAPNSNSNGSWAPRRKK
hide sequence
Ensembl Acc Id:
ENSRNOP00000051363 ⟸ ENSRNOT00000049538
RGD ID: 13695584
Promoter ID: EPDNEW_R6109
Type: multiple initiation site
Name: Lmf2_1
Description: lipase maturation factor 2
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 7 130,326,338 - 130,326,398 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-05-02
Lmf2
lipase maturation factor 2
Tmem112b
transmembrane protein 112B
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2008-03-07
Tmem112b
transmembrane protein 112B
RGD1306274
similar to hypothetical protein BC002942
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2005-12-06
RGD1306274
similar to hypothetical protein BC002942
RGD1306274_predicted
similar to hypothetical protein BC002942 (predicted)
Symbol and Name updated
1559027
APPROVED
2005-01-20
RGD1306274_predicted
similar to hypothetical protein BC002942 (predicted)
LOC315218_predicted
Symbol and Name status set to approved
1331353
APPROVED
2005-01-12
LOC315218_predicted
similar to hypothetical protein BC002942 (predicted)
Symbol and Name status set to provisional
70820
PROVISIONAL