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Gene: Bcor (BCL6 corepressor) Ictidomys tridecemlineatus

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Symbol:

Bcor

Name:

BCL6 corepressor

RGD ID:

12722906

Description:

ENCODES a protein that exhibits DNA-binding transcription factor binding (inferred); heat shock protein binding (inferred); histone deacetylase binding (inferred); INVOLVED IN blastocyst hatching (inferred); chromatin remodeling (inferred); heart development (inferred); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); anterior segment dysgenesis 8 (ortholog); FOUND IN BCOR complex (inferred); nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

BCL-6 corepressor

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	BCOR (BCL6 corepressor)	NCBI	Ortholog
Mus musculus (house mouse):	Bcor (BCL6 interacting corepressor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Bcor (BCL6 co-repressor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Bcor (BCL6 corepressor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	BCOR (BCL6 corepressor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	BCOR (BCL6 corepressor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	BCOR (BCL6 corepressor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	BCOR (BCL6 corepressor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Bcor (BCL6 corepressor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	26,923,332 - 26,971,483 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936502	6,764,907 - 6,792,916 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936502	6,764,043 - 6,812,194 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bcor	Squirrel	colorectal cancer	treatment	ISO	BCOR (Homo sapiens)	9068941		RGD	PMID:27880939 and REF_RGD_ID:150340704
Bcor	Squirrel	dental caries	susceptibility	ISO	BCOR (Homo sapiens)	9068941	DNA:SNP: : rs17145638(human)	RGD	PMID:23470693 and REF_RGD_ID:155631274
Bcor	Squirrel	proliferative diabetic retinopathy	susceptibility	ISO	BCOR (Homo sapiens)	9068941	associated with type 1 diabetes mellitus and DNA:hypomethylation:5'UTR	RGD	PMID:26248552 and REF_RGD_ID:155631276
Bcor	Squirrel	stomach cancer	disease_progression	ISO	BCOR (Homo sapiens)	9068941		RGD	PMID:33145269 and REF_RGD_ID:150340707
Bcor	Squirrel	stomach carcinoma	disease_progression	ISO	BCOR (Homo sapiens)	9068941		RGD	PMID:27313181 and REF_RGD_ID:150340706

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bcor	Squirrel	acute myeloid leukemia		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Acute myeloid leukemia	ClinVar
Bcor	Squirrel	anterior segment dysgenesis 8		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Anterior segment dysgenesis 8	ClinVar	PMID:25741868
Bcor	Squirrel	autistic disorder		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106 and PMID:30208311
Bcor	Squirrel	cataract		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital cataract	ClinVar	PMID:24728327 more ...
Bcor	Squirrel	cerebellar hypoplasia		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital cerebellar hypoplasia	ClinVar	PMID:25741868
Bcor	Squirrel	coronin-1A deficiency		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: IMMUNODEFICIENCY 8 WITH LYMPHOPROLIFERATION	ClinVar	PMID:24728327 more ...
Bcor	Squirrel	genetic disease		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:24728327 more ...
Bcor	Squirrel	intellectual disability		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability	ClinVar	PMID:25741868 and PMID:28492532
Bcor	Squirrel	Neurodevelopmental Disorders		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
Bcor	Squirrel	ornithine carbamoyltransferase deficiency		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Ornithine carbamoyltransferase deficiency	ClinVar	PMID:11793468 more ...
Bcor	Squirrel	syndromic microphthalmia 1		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Microphthalmia and syndromic 1	ClinVar	PMID:24728327 more ...
Bcor	Squirrel	syndromic microphthalmia 2		ISO	BCOR (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15004558 more ...
Bcor	Squirrel	syndromic X-linked intellectual disability Hedera type		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Hedera type	ClinVar	PMID:23901204 more ...
Bcor	Squirrel	syndromic X-linked intellectual disability Lubs type		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs type	ClinVar	PMID:25741868
Bcor	Squirrel	syndromic X-linked intellectual disability Najm type		ISO	BCOR (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability more ...	ClinVar	PMID:23901204 and PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bcor	Squirrel	adenoid cystic carcinoma		ISO	BCOR (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:23685749
Bcor	Squirrel	clear cell sarcoma		ISO	BCOR (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:26098867
Bcor	Squirrel	embryonal rhabdomyosarcoma		ISO	BCOR (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:29376028
Bcor	Squirrel	Kidney Neoplasms		ISO	BCOR (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:26098867
Bcor	Squirrel	nephroblastoma		ISO	BCOR (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:28825729
Bcor	Squirrel	osteosarcoma		ISO	BCOR (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:22387997

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bcor	Squirrel	syndromic microphthalmia 2		ISO	BCOR (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bcor	Squirrel	blastocyst hatching	acts_upstream_of_or_within	IEA	UniProtKB:Q8CGN4 and ensembl:ENSMUSP00000111175	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	chromatin remodeling	involved_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	heart development	involved_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	negative regulation of bone mineralization	involved_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	negative regulation of DNA-templated transcription	involved_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	negative regulation of tooth mineralization	involved_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	negative regulation of transcription by RNA polymerase II	involved_in	IEA	PANTHER:PTN001190924	150520179		TreeGrafter	GO_REF:0000118
Bcor	Squirrel	negative regulation of transcription by RNA polymerase II	involved_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	negative regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	IEA	UniProtKB:Q8CGN4 and ensembl:ENSMUSP00000111175	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	odontogenesis	involved_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	roof of mouth development	involved_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	specification of axis polarity	involved_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bcor	Squirrel	BCOR complex	part_of	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	nucleoplasm	located_in	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	nucleus	located_in	IEA	UniProtKB:Q6W2J9 more ...	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	nucleus	located_in	IEA	PANTHER:PTN001190924	150520179		TreeGrafter	GO_REF:0000118

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bcor	Squirrel	DNA-binding transcription factor binding	enables	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	heat shock protein binding	enables	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	histone deacetylase binding	enables	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:P42568	9068941	PMID:23260655	IntAct	PMID:23260655
Bcor	Squirrel	protein binding	enables	ISO	PR:P23611	9068941	PMID:25331958	MGI	PMID:25331958
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:P41183	9068941	PMID:25490446	IntAct	PMID:25490446
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:Q9BSM1 and UniProtKB:Q9HC52	9068941	PMID:27705803	IntAct	PMID:27705803
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:Q8NHM5 more ...	9068941	PMID:26496610	IntAct	PMID:26496610
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:Q8NHM5 more ...	9068941	PMID:27505670	IntAct	PMID:27505670
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:Q8NHM5	9068941	PMID:24981860	IntAct	PMID:24981860
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:P41227 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:Q8NHM5 and UniProtKB:Q9BSM1	9068941	PMID:16943429	IntAct	PMID:16943429
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:P63208 more ...	9068941	PMID:16943429	UniProt	PMID:16943429
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:Q9BSM1-1	9068941	PMID:23523425	IntAct	PMID:23523425
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:Q9BSM1	9068941	PMID:26687479 and PMID:33961781	IntAct	PMID:26687479 and PMID:33961781
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:Q93009	9068941	PMID:16713569 and PMID:35271311	IntAct	PMID:16713569 and PMID:35271311
Bcor	Squirrel	protein binding	enables	ISO	UniProtKB:Q96A23	9068941	PMID:12522145	UniProt	PMID:12522145
Bcor	Squirrel	RNA polymerase II transcription regulatory region sequence-specific DNA binding	enables	IEA	UniProtKB:Q8CGN4 and ensembl:ENSMUSP00000111175	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	transcription cis-regulatory region binding	enables	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	transcription corepressor activity	enables	IEA	UniProtKB:Q6W2J9 more ...	150520179		Ensembl	GO_REF:0000107
Bcor	Squirrel	transcription corepressor activity	enables	IEA	PANTHER:PTN001190924	150520179		TreeGrafter	GO_REF:0000118
Bcor	Squirrel	ubiquitin-protein transferase activity	contributes_to	IEA	UniProtKB:Q6W2J9 and ensembl:ENSP00000367705	150520179		Ensembl	GO_REF:0000107

PMID:22301074	PMID:30032202

Bcor
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	26,923,332 - 26,971,483 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936502	6,764,907 - 6,792,916 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936502	6,764,043 - 6,812,194 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BCOR
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	40,051,246 - 40,177,329 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	40,049,815 - 40,177,329 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	39,910,499 - 40,036,582 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	39,795,561 - 39,846,998 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	44,049,354 - 44,175,356 (-)	NCBI		Celera
Cytogenetic Map	X	p11.4	NCBI
HuRef	X	37,648,006 - 37,771,447 (-)	NCBI		HuRef
CHM1_1	X	39,942,309 - 40,068,287 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	39,452,491 - 39,578,567 (-)	NCBI		T2T-CHM13v2.0

Bcor
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	11,902,976 - 12,026,769 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	11,902,979 - 12,026,594 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	12,036,737 - 12,160,516 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	12,036,740 - 12,160,355 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	11,613,863 - 11,737,481 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	11,193,696 - 11,237,013 (-)	NCBI		MGSCv36	mm8
Celera	X	9,733,265 - 9,856,163 (-)	NCBI		Celera
Cytogenetic Map	X	A1.1	NCBI
cM Map	X	6.83	NCBI

Bcor
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	13,282,431 - 13,402,254 (+)	NCBI		GRCr8
mRatBN7.2	X	10,609,756 - 10,729,613 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	10,687,732 - 10,729,613 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	10,875,038 - 10,916,895 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	14,371,910 - 14,413,764 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	10,634,826 - 10,676,706 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	11,570,155 - 11,692,022 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	11,648,989 - 11,691,099 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	12,366,781 - 12,488,777 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	22,699,778 - 22,820,234 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	11,211,546 - 11,253,981 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

Bcor
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955566	1,412,540 - 1,457,329 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955566	1,412,540 - 1,510,339 (-)	NCBI	ChiLan1.0	ChiLan1.0

BCOR
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	41,696,464 - 41,822,839 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	41,699,844 - 41,826,220 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	32,497,931 - 32,624,307 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	40,203,565 - 40,328,788 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	40,202,235 - 40,249,986 (-)	Ensembl	panpan1.1		panPan2

BCOR
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	34,621,314 - 34,735,502 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	34,621,886 - 34,645,766 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	21,969,928 - 22,084,065 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	34,669,641 - 34,783,826 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	34,668,759 - 34,753,231 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	34,749,439 - 34,863,578 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	34,721,876 - 34,836,005 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	34,764,590 - 34,878,770 (-)	NCBI		UU_Cfam_GSD_1.0

BCOR
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	35,768,017 - 35,814,833 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	35,768,013 - 35,891,013 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	39,823,458 - 39,946,360 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BCOR
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	37,191,242 - 37,319,966 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	37,192,874 - 37,319,782 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666076	2,405,573 - 2,532,624 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Bcor
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624762	15,420,596 - 15,465,873 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624762	15,338,331 - 15,465,683 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_021725597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040287880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000003232 ⟹ ENSSTOP00000002886

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936502	6,764,907 - 6,792,916 (-)	Ensembl

RefSeq Acc Id:

XM_040287880 ⟹ XP_040143814

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	26,923,332 - 26,971,483 (-)	NCBI


Protein RefSeqs	XP_040143814	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000002886.3
GenBank Protein	KAG3271942	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_040143814 ⟸ XM_040287880
- UniProtKB:	I3M1W7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000002886 ⟸ ENSSTOT00000003232

Protein Domains

BCL-6 corepressor non-ankyrin-repeat BCL-6 corepressor PCGF1 binding

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000003219	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000003232.3	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
	3.10.260.40	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	BCOR	UniProtKB/TrEMBL
	BCOR-like	UniProtKB/TrEMBL
	PUFD	UniProtKB/TrEMBL
	PUFD_som_sf	UniProtKB/TrEMBL
NCBI Gene	Bcor	ENTREZGENE
PANTHER	AGAP007537-PB	UniProtKB/TrEMBL
	BCL-6 COREPRESSOR	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	BCOR	UniProtKB/TrEMBL
	PUFD	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48403	UniProtKB/TrEMBL
UniProt	I3M1W7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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