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Gene: Glyr1 (glyoxylate reductase 1 homolog) Ictidomys tridecemlineatus

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Symbol:

Glyr1

Name:

glyoxylate reductase 1 homolog

RGD ID:

12698702

Description:

ENCODES a protein that exhibits chromatin binding (inferred); chromatin-protein adaptor activity (inferred); DNA binding (inferred); INVOLVED IN transcription elongation-coupled chromatin remodeling (inferred); transcription initiation-coupled chromatin remodeling (inferred); ASSOCIATED WITH atrioventricular septal defect (ortholog); Rubinstein-Taybi syndrome (ortholog); FOUND IN chromatin (inferred); chromosome (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

putative oxidoreductase GLYR1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	106,916,484 - 106,948,692 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936530	4,761,823 - 4,794,729 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936530	4,761,838 - 4,794,191 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Glyr1	Squirrel	Rubinstein-Taybi syndrome		ISO	GLYR1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Rubinstein-Taybi syndrome	ClinVar	PMID:18688873 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Glyr1	Squirrel	atrioventricular septal defect		ISO	Glyr1 (Mus musculus)	9068941	OMIM:600309 more ...	MouseDO

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Glyr1	Squirrel	transcription elongation-coupled chromatin remodeling	involved_in	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107
Glyr1	Squirrel	transcription elongation-coupled chromatin remodeling	involved_in	IEA	PANTHER:PTN000541405	150520179		TreeGrafter	GO_REF:0000118
Glyr1	Squirrel	transcription initiation-coupled chromatin remodeling	involved_in	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Glyr1	Squirrel	chromatin	located_in	IEA	PANTHER:PTN000541405	150520179		TreeGrafter	GO_REF:0000118
Glyr1	Squirrel	chromatin	is_active_in	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107
Glyr1	Squirrel	chromosome	located_in	IEA	UniProtKB-SubCell:SL-0468	150520179		UniProt	GO_REF:0000044
Glyr1	Squirrel	chromosome	located_in	IEA	UniProtKB-KW:KW-0158	150520179		UniProt	GO_REF:0000043
Glyr1	Squirrel	cytosol	located_in	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107
Glyr1	Squirrel	nucleoplasm	located_in	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107
Glyr1	Squirrel	nucleosome	part_of	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Glyr1	Squirrel	chromatin binding	enables	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107
Glyr1	Squirrel	chromatin-protein adaptor activity	enables	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107
Glyr1	Squirrel	DNA binding	enables	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107
Glyr1	Squirrel	DNA binding	enables	IEA	PANTHER:PTN000541405	150520179		TreeGrafter	GO_REF:0000118
Glyr1	Squirrel	histone binding	enables	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107
Glyr1	Squirrel	NAD binding	enables	IEA	InterPro:IPR029154	150520179		InterPro	GO_REF:0000002
Glyr1	Squirrel	NADP binding	enables	IEA	InterPro:IPR006115	150520179		InterPro	GO_REF:0000002
Glyr1	Squirrel	nucleosome binding	enables	IEA	UniProtKB:Q49A26 and ensembl:ENSP00000322716	150520179		Ensembl	GO_REF:0000107
Glyr1	Squirrel	nucleosome binding	enables	IEA	PANTHER:PTN000541405	150520179		TreeGrafter	GO_REF:0000118
Glyr1	Squirrel	protein binding	enables	ISO	UniProtKB:Q8NB78	9068941	PMID:23260659	UniProt	PMID:23260659
Glyr1	Squirrel	protein binding	enables	ISO	UniProtKB:P43694	9068941	PMID:35182466	UniProt	PMID:35182466
Glyr1	Squirrel	protein binding	enables	ISO	UniProtKB:Q14192 and UniProtKB:Q8N9N8	9068941	PMID:31515488	IntAct	PMID:31515488
Glyr1	Squirrel	protein binding	enables	ISO	UniProtKB:O95833 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
Glyr1	Squirrel	protein binding	enables	ISO	UniProtKB:O00291 more ...	9068941	PMID:32814053	IntAct	PMID:32814053
Glyr1	Squirrel	protein binding	enables	ISO	UniProtKB:P24863 more ...	9068941	PMID:25416956	IntAct	PMID:25416956

PMID:22301074	PMID:30032202

Glyr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	106,916,484 - 106,948,692 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936530	4,761,823 - 4,794,729 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936530	4,761,838 - 4,794,191 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GLYR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	4,803,203 - 4,847,288 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	4,803,203 - 4,847,288 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	4,853,204 - 4,897,289 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	4,793,205 - 4,837,285 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	16	5,061,974 - 5,106,076 (-)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	4,819,402 - 4,863,584 (-)	NCBI		HuRef
CHM1_1	16	4,854,050 - 4,898,201 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	4,832,757 - 4,876,778 (-)	NCBI		T2T-CHM13v2.0

Glyr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	4,831,766 - 4,867,780 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	4,831,773 - 4,867,727 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	5,013,902 - 5,049,938 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	5,013,909 - 5,049,863 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	5,013,995 - 5,050,003 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	4,929,258 - 4,965,170 (-)	NCBI		MGSCv36	mm8
Celera	16	5,645,276 - 5,681,247 (-)	NCBI		Celera
Cytogenetic Map	16	A1	NCBI
cM Map	16	2.49	NCBI

Glyr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	11,038,577 - 11,074,093 (+)	NCBI		GRCr8
mRatBN7.2	10	10,532,036 - 10,567,639 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	10,532,154 - 10,567,637 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	15,240,171 - 15,273,873 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	14,728,991 - 14,762,692 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	10,398,277 - 10,431,933 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	10,725,830 - 10,759,471 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	10,725,819 - 10,761,279 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	9,492,794 - 9,528,295 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	10,648,082 - 10,681,723 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	10,648,081 - 10,681,723 (+)	NCBI
Celera	10	9,495,963 - 9,529,604 (+)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

Glyr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	12,654,805 - 12,694,090 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	12,654,805 - 12,694,090 (+)	NCBI	ChiLan1.0	ChiLan1.0

GLYR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	5,331,400 - 5,375,699 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	9,121,553 - 9,165,856 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	3,727,358 - 3,771,554 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	4,892,827 - 4,936,615 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	4,892,827 - 4,936,615 (-)	Ensembl	panpan1.1		panPan2

GLYR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	36,582,438 - 36,618,265 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	36,582,461 - 36,616,206 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	37,974,709 - 38,010,518 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	36,785,395 - 36,821,238 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	36,785,359 - 36,821,238 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	36,579,988 - 36,615,294 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	36,472,906 - 36,508,177 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	36,874,580 - 36,910,393 (+)	NCBI		UU_Cfam_GSD_1.0

GLYR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	37,555,394 - 37,593,559 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	37,555,357 - 37,593,492 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	38,626,413 - 38,664,624 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GLYR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	4,473,222 - 4,518,150 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	4,475,227 - 4,518,071 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	26,140,241 - 26,186,300 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Glyr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624824	2,655,909 - 2,692,522 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624824	2,655,909 - 2,692,546 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005327147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021727625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021727626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021727627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021727628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021727629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010004404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000012330 ⟹ ENSSTOP00000011049

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936530	4,763,866 - 4,794,162 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000033437 ⟹ ENSSTOP00000026969

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936530	4,761,823 - 4,794,729 (-)	Ensembl

RefSeq Acc Id:

XM_005327147 ⟹ XP_005327204

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	106,916,484 - 106,948,691 (-)	NCBI
SpeTri2.0	NW_004936530	4,763,145 - 4,794,185 (-)	NCBI

Sequence:

show sequence

CCAGGGTCTCGGCCCAGCTGTGAAGCCAGATTAAGAACCCTGGTTTGCCGGCTTTTGTCTGGCACTTGAGGATGCCAGCCGAGATTGAGAAGCATAAATTGCGTGTTGAGTGGCTTGAAGGAGAGGGA
CTGGCTTTTCCAGAGCAAGTGCTGACTCTTTGTGTTTTCTCTAGGGGGAAACTCGGCCGGTATCCTCCTTGGCCGGGAAAGATTGTTAATCCACCCAAGGACTTGAAGAAACCACGTGGAAAGAAATG
CTTCTTTGTGAAGTTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGAACAGCTAAAGCCATATCATGCTCATAAAGAGGAAATGATAAAGATCAACAAGGGTAAACGATTCCAGCAAGCTGTGG
ATGCTGTTGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGACATCATCCCACACCTCTGCTGATGACAAGAGTCGGCGTAATTCCAGTGAGGAGAGGAGTAGGCCAAACTCAGGTGACGAGAAG
CGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAACGTGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTGCAGAGAGAGGCTCCAAACCCCCTCTGAAAAGAGCCCAAGAGCAAAGTCCCCG
GAAACGGGGTCGGCCCCCAAAGGATGAGAAGGACCTCACCATCCCTGAGTCTAGTACCGTGAAGGGAATGATGGCTGGACCGATGGCCGCGTTTAAATGGCAGCCGACTGCAAGCGAGCCTGTCAAAG
ATGCAGATCCTCATTTCCATCATTTCCTGCTGAGCCAGACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACAAAGAAGTTGAAAATATGTGAAGAGGAAACCGGTTCCACCTCCATCCAGGCAGCA
GACAGCACAGCCGTGAATGGCAGCATTACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGCCTCATGGGAAGTGGCATCGTCTCCAACTTACTAAAAATGGGTCACACGGTGACTGTCTGGAA
CCGGACTGCAGAGAAAGAGGGGGCCCGCCTAGGAAGAACCCCCGCGGAAGTCGTTTCAACTTGTGACATCACTTTCGCCTGTGTGTCGGATCCAAAGGCAGCCAAGGACCTGGTGCTGGGCCCCAGTG
GTGTACTGCAAGGGATCCGCCCTGGGAAGTGCTATGTGGACATGTCAACGGTGGATGCTGACACAGTCACTGAGCTGGCCCAGGTGATTGTGTCCAGAGGGGGCCGCTTTCTGGAAGCCCCAGTCTCA
GGGAATCAGCAGCTGTCCAATGATGGGATGCTGGTGATTTTGGCAGCTGGAGACAGGGGGTTGTATGAGGACTGTAGCAGCTGCTTCCAGGCAATGGGAAAGACCTCCTTCTTTCTAGGTGAAGTTGG
GAATGCAGCCAAGATGATGCTCATCGTGAATATGGTCCAAGGGAGCTTCATGGCCACCATCGCTGAGGGGCTGACCCTGGCCCAAGTGACAGGCCAGTCACAGCAGACACTCTTGGACATCCTCAATC
AGGGACAGTTAGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGTTTGGCCATCGCACTGGGCGATGCC
GTCAACCACCCAACTCCCATGGCAGCTGCAGCCAACGAGGTGTACAAAAGAGCCAAGGCACTGGACCAGTCTGACAACGACATGTCTGCCGTGTACCGGGCCTACATACACTAAGCCGTTGGCACCCC
ACCCCTCCCGTCTTCCCACTGGCCCCTCTTCCTGATGTGGGGCCAGGGTCCCAGGACGTGGCTCTGGACCAGTCCACCTGTCTCCATTTCCTTTTATACAGACTCTGAGACTTGCCGTCAGCACAGCA
CACAGCAGCACCCTCCCCTGTGGCCCTGGGGAGGGAGGGGTGTCAGCAGGGTTGGCTCGTGAGGAAGCTGTTGTGCTGGACACGGGCCCCAGACTAGGAGGCGTGTGTTCTCACACGTGTGCTCATGT
ACACACACACACACACACACACACACACACACACACACACACACGTGCACACACTGGCTCTCACCCCAGGATAGAAACTGCCCAGAAACTGCTGCCTGGCTTTTTTCTTCTTCCAAGCTTGTCTTATC
TCAGACCCTTTCCAGTTGAGGAACTAGAATCAACAGTGAGAGTTGGAAGCCTTCCCACAGCTTCCCCAGAAGAGAGGCTTACGTGTCCCCCGCTGGACCCCTGCAGGAAAAGGCTCTGGGCCAAGATG
AACCAGCAGAGAGACTCCTGATGGAGGCTCCCACGGGCCCTCCAGCCGCAGGTGACCAGCTGAGGAGGATTTTCACGTCTAAGCTATCAGCACGCAGCTAACTCTGTCAACGCCTTTGTGGACTGAGA
CGAGACTGACAGTCCCACACAGCAGGCTTTGGCTCCACAAGAAGAGCAGCAAGAGGCCAGCCTGTAG

hide sequence

RefSeq Acc Id:

XM_021727625 ⟹ XP_021583300

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	106,916,484 - 106,948,691 (-)	NCBI
SpeTri2.0	NW_004936530	4,761,838 - 4,794,184 (-)	NCBI

Sequence:

show sequence

CAGGGTCTCGGCCCAGCTGTGAAGCCAGATTAAGAACCCTGGTTTGCCGGCTTTTGTCTGGCACTTGAGGATGCCAGCCGAGATTGAGAAGCATAAATTGCGTGTTGAGTGGCTTGAAGGAGAGGGAC
TGGCTTTTCCAGAGCAAGTGCTGACTCTTTGTGTTTTCTCTAGGGGGAAACTCGGCCGGTATCCTCCTTGGCCGGGAAAGATTGTTAATCCACCCAAGGACTTGAAGAAACCACGTGGAAAGAAATGC
TTCTTTGTGAAGTTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGAACAGCTAAAGCCATATCATGCTCATAAAGAGGAAATGATAAAGATCAACAAGGGTAAACGATTCCAGCAAGCTGTGGA
TGCTGTTGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGACATCATCCCACACCTCTGCTGATGACAAGAGTCGGCGTAATTCCAGTGAGGAGAGGAGTAGGCCAAACTCAGGTGACGAGAAGC
GCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAACGTGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTGCAGAGAGAGGCTCCAAACCCCCTCTGAAAAGAGCCCAAGAGCAAAGTCCCCGG
AAACGGGGTCGGCCCCCAAAGGATGAGAAGGACCTCACCATCCCTGAGTCTAGTACCGTGAAGGGAATGATGGCTGGACCGATGGCCGCGTTTAAATGGCAGCCGACTGCAAGCGAGCCTGTCAAAGA
TGCAGATCCTCATTTCCATCATTTCCTGCTGAGCCAGACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACAAAGAAGTTGAAAATATGTGAAGAGGAAACCGGTTCCACCTCCATCCAGGCAGCAG
ACAGCACAGCCGTGAATGGCAGCATTACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGCCTCATGGGAAGTGGCATCGTCTCCAACTTACTAAAAATGGGTCACACGGTGACTGTCTGGAAC
CGGACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCGCCTAGGAAGAACCCCCGCGGAAGTCGTTTCAACTTGTGACATCACTTTCGCCTGTGTGTCGGATCCAAAGGCAGCCAAGGACCT
GGTGCTGGGCCCCAGTGGTGTACTGCAAGGGATCCGCCCTGGGAAGTGCTATGTGGACATGTCAACGGTGGATGCTGACACAGTCACTGAGCTGGCCCAGGTGATTGTGTCCAGAGGGGGCCGCTTTC
TGGAAGCCCCAGTCTCAGGGAATCAGCAGCTGTCCAATGATGGGATGCTGGTGATTTTGGCAGCTGGAGACAGGGGGTTGTATGAGGACTGTAGCAGCTGCTTCCAGGCAATGGGAAAGACCTCCTTC
TTTCTAGGTGAAGTTGGGAATGCAGCCAAGATGATGCTCATCGTGAATATGGTCCAAGGGAGCTTCATGGCCACCATCGCTGAGGGGCTGACCCTGGCCCAAGTGACAGGCCAGTCACAGCAGACACT
CTTGGACATCCTCAATCAGGGACAGTTAGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGTTTGGCCA
TCGCACTGGGCGATGCCGTCAACCACCCAACTCCCATGGCAGCTGCAGCCAACGAGGTGTACAAAAGAGCCAAGGCACTGGACCAGTCTGACAACGACATGTCTGCCGTGTACCGGGCCTACATACAC
TAAGCCGTTGGCACCCCACCCCTCCCGTCTTCCCACTGGCCCCTCTTCCTGATGTGGGGCCAGGGTCCCAGGACGTGGCTCTGGACCAGTCCACCTGTCTCCATTTCCTTTTATACAGACTCTGAGAC
TTGCCGTCAGCACAGCACACAGCAGCACCCTCCCCTGTGGCCCTGGGGAGGGAGGGGTGTCAGCAGGGTTGGCTCGTGAGGAAGCTGTTGTGCTGGACACGGGCCCCAGACTAGGAGGCGTGTGTTCT
CACACGTGTGCTCATGTACACACACACACACACACACACACACACACACACACACACACACGTGCACACACTGGCTCTCACCCCAGGATAGAAACTGCCCAGAAACTGCTGCCTGGCTTTTTTCTTCT
TCCAAGCTTGTCTTATCTCAGACCCTTTCCAGTTGAGGAACTAGAATCAACAGTGAGAGTTGGAAGCCTTCCCACAGCTTCCCCAGAAGAGAGGCTTACGTGTCCCCCGCTGGACCCCTGCAGGAAAA
GGCTCTGGGCCAAGATGAACCAGCAGAGAGACTCCTGATGGAGGCTCCCACGGGCCCTCCAGCCGCAGGTGACCAGCTGAGGAGGATTTTCACGTCTAAGCTATCAGCACGCAGCTAACTCTGTCAAC
GCCTTTGTGGACTGAGACGAGACTGACAGTCCCACACAGCAGGCTTTGGCTCCACAAGAAGAGCAGCAAGAGGCCAGCCTGTAGGTGAGCACAGCTGCCAGGCTCCCCTCACTGCTGCTCAGCACCCG
CCACAGATGCCACCATCACTCACAAGCCTCTGCCAGCCTGAGGTCCTTGACTCCCTGCAGTGGGAGCTTGCTCCTTACCAGGCTGTTTTAGTGTTTGGATTTGCATTCCAGCCCTTGGGAAGGGGGTC
CTGAGGGCACCAGTGAGCAGTGAAGAGGAGGGATGGCTTCTTCCTGTTTCCGTTATGCCACAATCTCTTCACCTGGCTCTGCAGAGCCACTCTGAACCGGCCCACCTGCCCCAGCCTTCCCTGCATGC
CCCACCTCTCCTTCCTCCCCTTTTCTTCCCACAGAGGTCTGTCTGTCCTGTCTTTTGGCCCAGACCCAGCCTAAACAACAATGAGCATTTTTCTTGGGCTCAGCTCTTGATAGGGAACAGGTATCTTC
GTTTCAGCTAGCATCATGGTCTTGGGTGCTTCCTGGGCCCTGAGTCTGTTAGGATGGAAGAGAACTGGGTCTAATGTAGCCTGGTCTAGTAGACCGTCGGGTGGAGCTGGGGTTATCCTCAAGGCCCT
GACATTTCTCCTTGGATGGGGACCAGAAGGGCTTAGAATGTTGCTCGAGAACAAGGAGAAGTCACCCAAAGGATGTCACCTTTTTCTCCCTCATGGTTTGGGTTTTCCAAAGTCACAATTTGCCCAAG
GTCAGCATTTATAGTGAAGTATATGTAACTATATAAGGTGGCCACACTGGTGTGGGGTCTCTCCCCCTCACAACCTTGGCCCTTTTCCACTCTTTAGAATGGAGGACATGGGGTGGGACAGAGAAGAC
GCCCTGCGGTTCCGCACAGTTGTTCTTTCACACTGGGATTTTGAACTCGTCTGTCTGAACACAGCCTGTCCTAGTCCTGGAGGACACAGAGGGTGGGGTAGGGGAAGATGCTGTAATGAAACCGGTTA
GTCAATGTTGTCTTAATATTGTTGACAATTCTGTATAGTTCCTTTTTATGAATATTTCTGTTTAAGCTATTTCGTCTGTTTTGAAACCCTTCCCTTTTAAGGAGAAAATGTGACACTTGTGAAAAGCT
TGTAAGAAAGCCCTCCTTCCCTTTTTCCTTTAAGCCTCCTTTAAATGACAAATCTAGGTGATTAAGGTTGTGAATTTTTATTTTTGCTTTGTTTTTAATGAACATTTGTCTTTCAGAATAGGATTGTG
TGATAATGTTTAAATGGCAAAAAACAAAAAAAAAAACATGATTTTGTGCAATTAACAAAGCTACTGCAAGAAAAAAATAAAACATTTCTTGGTAACAGCTGTGCCACGCTA

hide sequence

RefSeq Acc Id:

XM_021727626 ⟹ XP_021583301

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	106,918,003 - 106,948,692 (-)	NCBI
SpeTri2.0	NW_004936530	4,763,145 - 4,794,185 (-)	NCBI

Sequence:

show sequence

CCAGGGTCTCGGCCCAGCTGTGAAGCCAGATTAAGAACCCTGGTTTGCCGGCTTTTGTCTGGCACTTGAGGATGCCAGCCGAGATTGAGAAGCATAAATTGCGTGTTGAGTGGCTTGAAGGAGAGGGA
CTGGCTTTTCCAGAGCAAGTGCTGACTCTTTGTGTTTTCTCTAGGGGGAAACTCGGCCGGTATCCTCCTTGGCCGGGAAAGATTGTTAATCCACCCAAGGACTTGAAGAAACCACGTGGAAAGAAATG
CTTCTTTGTGAAGTTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGAACAGCTAAAGCCATATCATGCTCATAAAGAGGAAATGATAAAGATCAACAAGGGTAAACGATTCCAGCAAGCTGTGG
ATGCTGTTGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGACATCATCCCACACCTCTGCTGATGACAAGAGTCGGCGTAATTCCAGTGAGGAGAGGAGTAGGCCAAACTCAGGTGACGAGAAG
CGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAACGTGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTGCAGAGAGAGGCTCCAAACCCCCTCTGAAAAGAGCCCAAGAGCAAAGTCCCCG
GAAACGGGGTCGGCCCCCAAAGGATGAGAAGGACCTCACCATCCCTGAGTCTAGTACCGTGAAGGGAATGATGGCTGGACCGATGGCCGCGTTTAAATGGCAGCCGACTGCAAGCGAGCCTGTCAAAG
ATGCAGATCCTCATTTCCATCATTTCCTGCTGAGCCAGACAGAGAAGGAAACCGGTTCCACCTCCATCCAGGCAGCAGACAGCACAGCCGTGAATGGCAGCATTACACCCACAGACAAAAAGATAGGA
TTTTTGGGCCTTGGCCTCATGGGAAGTGGCATCGTCTCCAACTTACTAAAAATGGGTCACACGGTGACTGTCTGGAACCGGACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCGCCTAGG
AAGAACCCCCGCGGAAGTCGTTTCAACTTGTGACATCACTTTCGCCTGTGTGTCGGATCCAAAGGCAGCCAAGGACCTGGTGCTGGGCCCCAGTGGTGTACTGCAAGGGATCCGCCCTGGGAAGTGCT
ATGTGGACATGTCAACGGTGGATGCTGACACAGTCACTGAGCTGGCCCAGGTGATTGTGTCCAGAGGGGGCCGCTTTCTGGAAGCCCCAGTCTCAGGGAATCAGCAGCTGTCCAATGATGGGATGCTG
GTGATTTTGGCAGCTGGAGACAGGGGGTTGTATGAGGACTGTAGCAGCTGCTTCCAGGCAATGGGAAAGACCTCCTTCTTTCTAGGTGAAGTTGGGAATGCAGCCAAGATGATGCTCATCGTGAATAT
GGTCCAAGGGAGCTTCATGGCCACCATCGCTGAGGGGCTGACCCTGGCCCAAGTGACAGGCCAGTCACAGCAGACACTCTTGGACATCCTCAATCAGGGACAGTTAGCCAGCATCTTCCTGGACCAGA
AGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGTTTGGCCATCGCACTGGGCGATGCCGTCAACCACCCAACTCCCATGGCAGCTGCAGCC
AACGAGGTGTACAAAAGAGCCAAGGCACTGGACCAGTCTGACAACGACATGTCTGCCGTGTACCGGGCCTACATACACTAAGCCGTTGGCACCCCACCCCTCCCGTCTTCCCACTGGCCCCTCTTCCT
GATGTGGGGCCAGGGTCCCAGGACGTGGCTCTGGACCAGTCCACCTGTCTCCATTTCCTTTTATACAGACTCTGAGACTTGCCGTCAGCACAGCACACAGCAGCACCCTCCCCTGTGGCCCTGGGGAG
GGAGGGGTGTCAGCAGGGTTGGCTCGTGAGGAAGCTGTTGTGCTGGACACGGGCCCCAGACTAGGAGGCGTGTGTTCTCACACGTGTGCTCATGTACACACACACACACACACACACACACACACACA
CACACACACACGTGCACACACTGGCTCTCACCCCAGGATAGAAACTGCCCAGAAACTGCTGCCTGGCTTTTTTCTTCTTCCAAGCTTGTCTTATCTCAGACCCTTTCCAGTTGAGGAACTAGAATCAA
CAGTGAGAGTTGGAAGCCTTCCCACAGCTTCCCCAGAAGAGAGGCTTACGTGTCCCCCGCTGGACCCCTGCAGGAAAAGGCTCTGGGCCAAGATGAACCAGCAGAGAGACTCCTGATGGAGGCTCCCA
CGGGCCCTCCAGCCGCAGGTGACCAGCTGAGGAGGATTTTCACGTCTAAGCTATCAGCACGCAGCTAACTCTGTCAACGCCTTTGTGGACTGAGACGAGACTGACAGTCCCACACAGCAGGCTTTGGC
TCCACAAGAAGAGCAGCAAGAGGCCAGCCTGTAG

hide sequence

RefSeq Acc Id:

XM_021727627 ⟹ XP_021583302

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	106,918,003 - 106,948,692 (-)	NCBI
SpeTri2.0	NW_004936530	4,763,145 - 4,794,187 (-)	NCBI

Sequence:

show sequence

GTCCAGGGTCTCGGCCCAGCTGTGAAGCCAGATTAAGAACCCTGGTTTGCCGGCTTTTGTCTGG
CACTTGAGGATGCCAGCCGAGATTGAGAAGCATAAATTGCGTGTTGAGTGGCTTGAAGGAGAGGGACTGGCTTTTCCAGAGCAAGTGCTGACTCTTTGTGTTTTCTCTAGGGGGAAACTCGGCCGGTA
TCCTCCTTGGCCGGGAAAGATTGTTAATCCACCCAAGGACTTGAAGAAACCACGTGGAAAGAAATGCTTCTTTGTGAAGTTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGAACAGCTAAAGC
CATATCATGCTCATAAAGAGGAAATGATAAAGATCAACAAGGGTAAACGATTCCAGCAAGCTGTGGATGCTGTTGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGACATCATCCCACACCTCT
GCTGATGACAAGAGTCGGCGTAATTCCAGTGAGGAGAGGAGTAGGCCAAACTCAGGTGACGAGAAGCGCAAACTTAGCCTGTCTGAAGGGAAGGTGAAGAAGAACGTGGGAGAAGGAAAGAAGAGGGT
GTCTTCAGGCTCTGCAGAGAGAGGCTCCAAACCCCCTCTGAAAAGAGCCCAAGAGCAAAGTCCCCGGAAACGGGGTCGGCCCCCAAAGGATGAGAAGGACCTCACCATCCCTGAGTCTAGTACCGTGA
AGGGAATGATGGCTGGACCGATGGCCGCGTTTAAATGGCAGCCGACTGCAAGCGAGCCTGTCAAAGATGCAGATCCTCATTTCCATCATTTCCTGCTGAGCCAGACAGAGAAGGAAACCGGTTCCACC
TCCATCCAGGCAGCAGACAGCACAGCCGTGAATGGCAGCATTACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGCCTCATGGGAAGTGGCATCGTCTCCAACTTACTAAAAATGGGTCACAC
GGTGACTGTCTGGAACCGGACTGCAGAGAAAGAGGGGGCCCGCCTAGGAAGAACCCCCGCGGAAGTCGTTTCAACTTGTGACATCACTTTCGCCTGTGTGTCGGATCCAAAGGCAGCCAAGGACCTGG
TGCTGGGCCCCAGTGGTGTACTGCAAGGGATCCGCCCTGGGAAGTGCTATGTGGACATGTCAACGGTGGATGCTGACACAGTCACTGAGCTGGCCCAGGTGATTGTGTCCAGAGGGGGCCGCTTTCTG
GAAGCCCCAGTCTCAGGGAATCAGCAGCTGTCCAATGATGGGATGCTGGTGATTTTGGCAGCTGGAGACAGGGGGTTGTATGAGGACTGTAGCAGCTGCTTCCAGGCAATGGGAAAGACCTCCTTCTT
TCTAGGTGAAGTTGGGAATGCAGCCAAGATGATGCTCATCGTGAATATGGTCCAAGGGAGCTTCATGGCCACCATCGCTGAGGGGCTGACCCTGGCCCAAGTGACAGGCCAGTCACAGCAGACACTCT
TGGACATCCTCAATCAGGGACAGTTAGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGTTTGGCCATC
GCACTGGGCGATGCCGTCAACCACCCAACTCCCATGGCAGCTGCAGCCAACGAGGTGTACAAAAGAGCCAAGGCACTGGACCAGTCTGACAACGACATGTCTGCCGTGTACCGGGCCTACATACACTA
AGCCGTTGGCACCCCACCCCTCCCGTCTTCCCACTGGCCCCTCTTCCTGATGTGGGGCCAGGGTCCCAGGACGTGGCTCTGGACCAGTCCACCTGTCTCCATTTCCTTTTATACAGACTCTGAGACTT
GCCGTCAGCACAGCACACAGCAGCACCCTCCCCTGTGGCCCTGGGGAGGGAGGGGTGTCAGCAGGGTTGGCTCGTGAGGAAGCTGTTGTGCTGGACACGGGCCCCAGACTAGGAGGCGTGTGTTCTCA
CACGTGTGCTCATGTACACACACACACACACACACACACACACACACACACACACACACGTGCACACACTGGCTCTCACCCCAGGATAGAAACTGCCCAGAAACTGCTGCCTGGCTTTTTTCTTCTTC
CAAGCTTGTCTTATCTCAGACCCTTTCCAGTTGAGGAACTAGAATCAACAGTGAGAGTTGGAAGCCTTCCCACAGCTTCCCCAGAAGAGAGGCTTACGTGTCCCCCGCTGGACCCCTGCAGGAAAAGG
CTCTGGGCCAAGATGAACCAGCAGAGAGACTCCTGATGGAGGCTCCCACGGGCCCTCCAGCCGCAGGTGACCAGCTGAGGAGGATTTTCACGTCTAAGCTATCAGCACGCAGCTAACTCTGTCAACGC
CTTTGTGGACTGAGACGAGACTGACAGTCCCACACAGCAGGCTTTGGCTCCACAAGAAGAGCAGCAAGAGGCCAGCCTGTAG

hide sequence

RefSeq Acc Id:

XM_021727628 ⟹ XP_021583303

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	106,916,484 - 106,948,692 (-)	NCBI
SpeTri2.0	NW_004936530	4,763,145 - 4,794,190 (-)	NCBI

Sequence:

show sequence

CAGGTCCAGGGTCTCGGCCCAGCTGTGAAGCCAGATTAAGAACCCTGGTTTGCCGGCTTTTGTCTGGCACTTGAGGATGCCAGCCGAGATTGAGAAGCATAAATTGCGTGTTGAGTGGCTTGAAGGAG
AGGGACTGGCTTTTCCAGAGCAAGTGCTGACTCTTTGTGTTTTCTCTAGGGGGAAACTCGGCCGGTATCCTCCTTGGCCGGGAAAGATTGTTAATCCACCCAAGGACTTGAAGAAACCACGTGGAAAG
AAATGCTTCTTTGTGAAGTTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGAACAGCTAAAGCCATATCATGCTCATAAAGAGGAAATGATAAAGATCAACAAGGGTAAACGATTCCAGCAAGC
TGTGGATGCTGTTGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGGACCTCACCATCCCTGAGTCTAGTACCGTGAAGGGAATGATGGCTGGACCGATGGCCGCGTTTAAATGGCAGCCGACTG
CAAGCGAGCCTGTCAAAGATGCAGATCCTCATTTCCATCATTTCCTGCTGAGCCAGACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACAAAGAAGTTGAAAATATGTGAAGAGGAAACCGGTTCC
ACCTCCATCCAGGCAGCAGACAGCACAGCCGTGAATGGCAGCATTACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGCCTCATGGGAAGTGGCATCGTCTCCAACTTACTAAAAATGGGTCA
CACGGTGACTGTCTGGAACCGGACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCGCCTAGGAAGAACCCCCGCGGAAGTCGTTTCAACTTGTGACATCACTTTCGCCTGTGTGTCGGATC
CAAAGGCAGCCAAGGACCTGGTGCTGGGCCCCAGTGGTGTACTGCAAGGGATCCGCCCTGGGAAGTGCTATGTGGACATGTCAACGGTGGATGCTGACACAGTCACTGAGCTGGCCCAGGTGATTGTG
TCCAGAGGGGGCCGCTTTCTGGAAGCCCCAGTCTCAGGGAATCAGCAGCTGTCCAATGATGGGATGCTGGTGATTTTGGCAGCTGGAGACAGGGGGTTGTATGAGGACTGTAGCAGCTGCTTCCAGGC
AATGGGAAAGACCTCCTTCTTTCTAGGTGAAGTTGGGAATGCAGCCAAGATGATGCTCATCGTGAATATGGTCCAAGGGAGCTTCATGGCCACCATCGCTGAGGGGCTGACCCTGGCCCAAGTGACAG
GCCAGTCACAGCAGACACTCTTGGACATCCTCAATCAGGGACAGTTAGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATACATTCAG
AAGGATCTCCGTTTGGCCATCGCACTGGGCGATGCCGTCAACCACCCAACTCCCATGGCAGCTGCAGCCAACGAGGTGTACAAAAGAGCCAAGGCACTGGACCAGTCTGACAACGACATGTCTGCCGT
GTACCGGGCCTACATACACTAAGCCGTTGGCACCCCACCCCTCCCGTCTTCCCACTGGCCCCTCTTCCTGATGTGGGGCCAGGGTCCCAGGACGTGGCTCTGGACCAGTCCACCTGTCTCCATTTCCT
TTTATACAGACTCTGAGACTTGCCGTCAGCACAGCACACAGCAGCACCCTCCCCTGTGGCCCTGGGGAGGGAGGGGTGTCAGCAGGGTTGGCTCGTGAGGAAGCTGTTGTGCTGGACACGGGCCCCAG
ACTAGGAGGCGTGTGTTCTCACACGTGTGCTCATGTACACACACACACACACACACACACACACACACACACACACACACGTGCACACACTGGCTCTCACCCCAGGATAGAAACTGCCCAGAAACTGC
TGCCTGGCTTTTTTCTTCTTCCAAGCTTGTCTTATCTCAGACCCTTTCCAGTTGAGGAACTAGAATCAACAGTGAGAGTTGGAAGCCTTCCCACAGCTTCCCCAGAAGAGAGGCTTACGTGTCCCCCG
CTGGACCCCTGCAGGAAAAGGCTCTGGGCCAAGATGAACCAGCAGAGAGACTCCTGATGGAGGCTCCCACGGGCCCTCCAGCCGCAGGTGACCAGCTGAGGAGGATTTTCACGTCTAAGCTATCAGCA
CGCAGCTAACTCTGTCAACGCCTTTGTGGACTGAGACGAGACTGACAGTCCCACACAGCAGGCTTTGGCTCCACAAGAAGAGCAGCAAGAGGCCAGCCTGTAG

hide sequence

RefSeq Acc Id:

XM_021727629 ⟹ XP_021583304

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	106,916,484 - 106,948,692 (-)	NCBI
SpeTri2.0	NW_004936530	4,763,145 - 4,794,191 (-)	NCBI

Sequence:

show sequence

CCAGGTCCAGGGTCTCGGCCCAGCTGTGAAGCCAGATTAAGAACCCTGGTTTGCCGGCTTTTGTCTGGCACTTGAGGATGCCAGCCGAGATTGAGAAGCATAAATTGCGTGTTGAGTGGCTTGAAGGA
GAGGGACTGGCTTTTCCAGAGCAAGTGCTGACTCTTTGTGTTTTCTCTAGGGGGAAACTCGGCCGGTATCCTCCTTGGCCGGGAAAGATTGTTAATCCACCCAAGGACTTGAAGAAACCACGTGGAAA
GAAATGCTTCTTTGTGAAGTTTTTTGGAACAGAAGATCATGCCTGGATCAAAGTGGAACAGCTAAAGCCATATCATGCTCATAAAGAGGAAATGATAAAGATCAACAAGGGTAAACGATTCCAGCAAG
CTGTGGATGCTGTTGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGGACCTCACCATCCCTGAGTCTAGTACCGTGAAGGGAATGATGGCTGGACCGATGGCCGCGTTTAAATGGCAGCCGACT
GCAAGCGAGCCTGTCAAAGATGCAGATCCTCATTTCCATCATTTCCTGCTGAGCCAGACAGAGAAGCCAGCTGTCTGTTACCAGGCAATCACAAAGAAGTTGAAAATATGTGAAGAGGAAACCGGTTC
CACCTCCATCCAGGCAGCAGACAGCACAGCCGTGAATGGCAGCATTACACCCACAGACAAAAAGATAGGATTTTTGGGCCTTGGCCTCATGGGAAGTGGCATCGTCTCCAACTTACTAAAAATGGGTC
ACACGGTGACTGTCTGGAACCGGACTGCAGAGAAAGAGGGGGCCCGCCTAGGAAGAACCCCCGCGGAAGTCGTTTCAACTTGTGACATCACTTTCGCCTGTGTGTCGGATCCAAAGGCAGCCAAGGAC
CTGGTGCTGGGCCCCAGTGGTGTACTGCAAGGGATCCGCCCTGGGAAGTGCTATGTGGACATGTCAACGGTGGATGCTGACACAGTCACTGAGCTGGCCCAGGTGATTGTGTCCAGAGGGGGCCGCTT
TCTGGAAGCCCCAGTCTCAGGGAATCAGCAGCTGTCCAATGATGGGATGCTGGTGATTTTGGCAGCTGGAGACAGGGGGTTGTATGAGGACTGTAGCAGCTGCTTCCAGGCAATGGGAAAGACCTCCT
TCTTTCTAGGTGAAGTTGGGAATGCAGCCAAGATGATGCTCATCGTGAATATGGTCCAAGGGAGCTTCATGGCCACCATCGCTGAGGGGCTGACCCTGGCCCAAGTGACAGGCCAGTCACAGCAGACA
CTCTTGGACATCCTCAATCAGGGACAGTTAGCCAGCATCTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCTCCGTTTGGC
CATCGCACTGGGCGATGCCGTCAACCACCCAACTCCCATGGCAGCTGCAGCCAACGAGGTGTACAAAAGAGCCAAGGCACTGGACCAGTCTGACAACGACATGTCTGCCGTGTACCGGGCCTACATAC
ACTAAGCCGTTGGCACCCCACCCCTCCCGTCTTCCCACTGGCCCCTCTTCCTGATGTGGGGCCAGGGTCCCAGGACGTGGCTCTGGACCAGTCCACCTGTCTCCATTTCCTTTTATACAGACTCTGAG
ACTTGCCGTCAGCACAGCACACAGCAGCACCCTCCCCTGTGGCCCTGGGGAGGGAGGGGTGTCAGCAGGGTTGGCTCGTGAGGAAGCTGTTGTGCTGGACACGGGCCCCAGACTAGGAGGCGTGTGTT
CTCACACGTGTGCTCATGTACACACACACACACACACACACACACACACACACACACACACACGTGCACACACTGGCTCTCACCCCAGGATAGAAACTGCCCAGAAACTGCTGCCTGGCTTTTTTCTT
CTTCCAAGCTTGTCTTATCTCAGACCCTTTCCAGTTGAGGAACTAGAATCAACAGTGAGAGTTGGAAGCCTTCCCACAGCTTCCCCAGAAGAGAGGCTTACGTGTCCCCCGCTGGACCCCTGCAGGAA
AAGGCTCTGGGCCAAGATGAACCAGCAGAGAGACTCCTGATGGAGGCTCCCACGGGCCCTCCAGCCGCAGGTGACCAGCTGAGGAGGATTTTCACGTCTAAGCTATCAGCACGCAGCTAACTCTGTCA
ACGCCTTTGTGGACTGAGACGAGACTGACAGTCCCACACAGCAGGCTTTGGCTCCACAAGAAGAGCAGCAAGAGGCCAGCCTGTAG

hide sequence


Protein RefSeqs	XP_005327204	(Get FASTA)	NCBI Sequence Viewer
	XP_021583300	(Get FASTA)	NCBI Sequence Viewer
	XP_021583301	(Get FASTA)	NCBI Sequence Viewer
	XP_021583302	(Get FASTA)	NCBI Sequence Viewer
	XP_021583303	(Get FASTA)	NCBI Sequence Viewer
	XP_021583304	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000011049.3
	ENSSTOP00000026969.1
GenBank Protein	KAG3259160	(Get FASTA)	NCBI Sequence Viewer
	KAG3259161	(Get FASTA)	NCBI Sequence Viewer
	KAG3259162	(Get FASTA)	NCBI Sequence Viewer
	KAG3259163	(Get FASTA)	NCBI Sequence Viewer
	KAG3259164	(Get FASTA)	NCBI Sequence Viewer
	KAG3259165	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005327204 ⟸ XM_005327147
- Peptide Label:	isoform X2
- UniProtKB:	I3MIY4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPAEIEKHKLRVEWLEGEGLAFPEQVLTLCVFSRGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHTSADD KSRRNSSEERSRPNSGDEKRKLSLSEGKVKKNVGEGKKRVSSGSAERGSKPPLKRAQEQSPRKRGRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKPAVCYQAI TKKLKICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVT ELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPD FYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYIH hide sequence

RefSeq Acc Id:	XP_021583300 ⟸ XM_021727625
- Peptide Label:	isoform X1
- UniProtKB:	A0A287D0E9 (UniProtKB/TrEMBL), I3MIY4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPAEIEKHKLRVEWLEGEGLAFPEQVLTLCVFSRGKLGRYPPWPGKIVNPPKDLKKPRGKKCFF VKFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHTSADDKSRRNSSEERSRPNSGDEKRKLSLSEGKVKKNVGEGKKRVSSGSAERGSKPPLKRAQEQSPRKR GRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKPAVCYQAITKKLKICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT AEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFL GEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYIH hide sequence

RefSeq Acc Id:	XP_021583304 ⟸ XM_021727629
- Peptide Label:	isoform X6
- UniProtKB:	I3MIY4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPAEIEKHKLRVEWLEGEGLAFPEQVLTLCVFSRGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQDLTIPESST VKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKPAVCYQAITKKLKICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKEGARLGRTPAEVVS TCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMAT IAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYIH hide sequence

RefSeq Acc Id:	XP_021583303 ⟸ XM_021727628
- Peptide Label:	isoform X5
- UniProtKB:	I3MIY4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPAEIEKHKLRVEWLEGEGLAFPEQVLTLCVFSRGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQDLTIPESST VKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKPAVCYQAITKKLKICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRT PAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQ GSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYIH hide sequence

RefSeq Acc Id:	XP_021583302 ⟸ XM_021727627
- Peptide Label:	isoform X4
- UniProtKB:	I3MIY4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPAEIEKHKLRVEWLEGEGLAFPEQVLTLCVFSRGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHTSADD KSRRNSSEERSRPNSGDEKRKLSLSEGKVKKNVGEGKKRVSSGSAERGSKPPLKRAQEQSPRKRGRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKETGSTSIQ AADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAP VSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALG DAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYIH hide sequence

Protein Domains

PWWP

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000012326	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000012330.3	UniProtKB/TrEMBL
	ENSSTOT00000033437.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.30.140	UniProtKB/TrEMBL
	N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase, domain 2	UniProtKB/TrEMBL
	NAD(P)-binding Rossmann-like Domain	UniProtKB/TrEMBL
InterPro	6-PGluconate_DH-like_C_sf	UniProtKB/TrEMBL
	6PGD_dom2	UniProtKB/TrEMBL
	6PGDH_NADP-bd	UniProtKB/TrEMBL
	HIBADH-related_NP60_sf	UniProtKB/TrEMBL
	NAD(P)-bd_dom_sf	UniProtKB/TrEMBL
	NADP-bd	UniProtKB/TrEMBL
	NP60_PWWP	UniProtKB/TrEMBL
	PWWP_dom	UniProtKB/TrEMBL
NCBI Gene	Glyr1	ENTREZGENE
PANTHER	OXIDOREDUCTASE GLYR1-RELATED	UniProtKB/TrEMBL
	OXIDOREDUCTASE GLYR1-RELATED	UniProtKB/TrEMBL
Pfam	NAD_binding_11	UniProtKB/TrEMBL
	NAD_binding_2	UniProtKB/TrEMBL
	PWWP	UniProtKB/TrEMBL
PROSITE	PWWP	UniProtKB/TrEMBL
SMART	PWWP	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48179	UniProtKB/TrEMBL
	SSF51735	UniProtKB/TrEMBL
	Tudor/PWWP/MBT	UniProtKB/TrEMBL
UniProt	A0A287D0E9	ENTREZGENE, UniProtKB/TrEMBL
	I3MIY4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI