Symbol:
Tnfrsf18
Name:
TNF receptor superfamily member 18
RGD ID:
12653545
Description:
INVOLVED IN positive regulation of cell adhesion (ortholog); positive regulation of leukocyte migration (ortholog); positive regulation of tyrosine phosphorylation of STAT protein (ortholog); ASSOCIATED WITH anogenital venereal wart (ortholog); chromosome 1p36 deletion syndrome (ortholog); congenital myasthenic syndrome 8 (ortholog); FOUND IN external side of plasma membrane (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
tumor necrosis factor receptor superfamily member 18
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Tnfrsf18
TNFRSF18 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 1,203,508 - 1,206,592 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 1,203,508 - 1,206,592 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 1,138,888 - 1,141,972 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 1,128,751 - 1,131,952 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 1 1,441,567 - 1,444,768 (+) NCBI Celera Cytogenetic Map 1 p36.33 NCBI HuRef 1 410,603 - 413,804 (-) NCBI HuRef CHM1_1 1 1,125,362 - 1,128,563 (-) NCBI CHM1_1 T2T-CHM13v2.0 1 631,965 - 635,049 (-) NCBI T2T-CHM13v2.0
Tnfrsf18 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 156,110,779 - 156,113,351 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 156,110,621 - 156,113,352 (+) Ensembl GRCm39 Ensembl GRCm38 4 156,026,322 - 156,028,894 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 156,026,164 - 156,028,895 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 155,400,451 - 155,403,000 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 154,870,142 - 154,872,691 (+) NCBI MGSCv36 mm8 Celera 4 158,288,886 - 158,291,431 (+) NCBI Celera Cytogenetic Map 4 E2 NCBI cM Map 4 87.76 NCBI
Tnfrsf18 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 171,901,734 - 171,904,578 (+) NCBI GRCr8 mRatBN7.2 5 166,618,461 - 166,622,353 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 166,618,969 - 166,622,353 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 169,323,289 - 169,325,887 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 171,144,711 - 171,147,309 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 171,107,243 - 171,109,841 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 173,459,371 - 173,463,980 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 173,460,354 - 173,463,140 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 176,933,400 - 176,938,350 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 172,869,196 - 172,871,795 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 5 164,820,612 - 164,823,210 (+) NCBI Celera Cytogenetic Map 5 q36 NCBI
Tnfrsf18 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955486 9,571,530 - 9,573,733 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955486 9,571,527 - 9,573,733 (+) NCBI ChiLan1.0 ChiLan1.0
TNFRSF18 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 227,018,219 - 227,022,812 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 225,714,938 - 225,719,522 (+) NCBI NHGRI_mPanPan1 PanPan1.1 1 1,160,540 - 1,163,839 (-) NCBI panpan1.1 PanPan1.1 panPan2
TNFRSF18 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 56,394,559 - 56,397,502 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 56,394,659 - 56,397,741 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 56,471,888 - 56,474,440 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 56,597,800 - 56,600,352 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 56,597,546 - 56,600,352 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 56,588,543 - 56,591,095 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 56,480,829 - 56,483,381 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 56,870,818 - 56,873,370 (-) NCBI UU_Cfam_GSD_1.0
TNFRSF18 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 6 63,516,045 - 63,518,405 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 6 63,516,037 - 63,519,323 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 6 58,018,980 - 58,021,594 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
TNFRSF18 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 130,237,950 - 130,243,303 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 130,225,847 - 130,242,251 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666054 34,806,938 - 34,812,229 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Tnfrsf18
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
RefSeq Acc Id:
XM_040289131 ⟹ XP_040145065
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405058 27,555,513 - 27,560,643 (-) NCBI
RefSeq Acc Id:
XP_040145065 ⟸ XM_040289131
