Gip (gastric inhibitory polypeptide) - Rat Genome Database

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Gene: Gip (gastric inhibitory polypeptide) Ictidomys tridecemlineatus
Analyze
Symbol: Gip
Name: gastric inhibitory polypeptide
RGD ID: 12633016
Description: ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN digestive system development (ortholog); female pregnancy (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH Anorexia (ortholog); autonomic nervous system disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular space (ortholog); neuronal cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC101970436
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560224,581,725 - 24,588,955 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649012,487,025 - 12,492,214 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649012,487,025 - 12,492,214 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 15 of 15 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GipSquirrelautonomic nervous system disease  ISORGD:13538849068941associated with Diabetes Mellitus, Non-Insulin-Dependent; protein:decreased expression:plasma (human)RGDPMID:18376350|REF_RGD_ID:2312592
GipSquirrelExperimental Diabetes Mellitus  ISORGD:27099068941mRNA:increased expression:retina (rat)RGDPMID:12789546|REF_RGD_ID:2312548
GipSquirrelhyperglycemia  ISORGD:13538849068941associated with Diabetes Mellitus, Non-Insulin-Dependent; protein:decreased expression:plasma (human)RGDPMID:19174495|REF_RGD_ID:2312590
GipSquirrelhyperinsulinism  ISORGD:27099068941protein:decreased expression:plasma (rat)RGDPMID:8059006|REF_RGD_ID:2312550
GipSquirrelhypothyroidism  ISORGD:27099068941protein:increased expression:plasma (rat)RGDPMID:9030821|REF_RGD_ID:2312549
GipSquirrelobesity  ISORGD:13538849068941associated with Polycystic Ovary Syndrome; protein:increased expression:plasma (human)RGDPMID:19375579|REF_RGD_ID:2312588
GipSquirrelobesity  ISORGD:13538849068941 RGDPMID:3546047|REF_RGD_ID:2312551
GipSquirrelobesity  ISORGD:27099068941protein:increased expression:plasma (rat)RGDPMID:18063845|REF_RGD_ID:2312547
GipSquirrelpancreas disease  ISORGD:27099068941protein:increased expression:plasma (rat)RGDPMID:3892654|REF_RGD_ID:2312553
GipSquirrelpolycystic ovary syndrome  ISORGD:13538849068941associated with Obesity; protein:increased expression:plasma (human)RGDPMID:19375579|REF_RGD_ID:2312588
GipSquirrelStarvation  ISORGD:27099068941protein:increased expression:duodenum, jejunum (rat)RGDPMID:6140913|REF_RGD_ID:2312554
GipSquirreltype 2 diabetes mellitus  ISORGD:15520089068941 RGDPMID:18937625|REF_RGD_ID:2312589
GipSquirreltype 2 diabetes mellitus  ISORGD:13538849068941 RGDPMID:19473824|REF_RGD_ID:2312587
GipSquirreltype 2 diabetes mellitus  ISORGD:27099068941 RGDPMID:19056762|REF_RGD_ID:2312529
GipSquirreltype 2 diabetes mellitus  ISORGD:13538849068941disease in rat treated with human proteinRGDPMID:19126188|REF_RGD_ID:2312591
1 to 15 of 15 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GipSquirrelhereditary breast ovarian cancer syndrome  ISORGD:13538848554872ClinVar Annotator: match by term: Breast-ovarian cancer, familial, susceptibility to, 1ClinVarPMID:38922859
GipSquirreltrichodontoosseous syndrome  ISORGD:13538848554872ClinVar Annotator: match by term: Tricho-dento-osseous syndromeClinVarPMID:25741868
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GipSquirrelAnorexia  ISORGD:13538849068941CTD Direct Evidence: marker/mechanismCTDPMID:28633506|PMID:28666375|PMID:29689362


Biological Process
1 to 20 of 31 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GipSquirreladenylate cyclase-activating G protein-coupled receptor signaling pathway involved_inIEAUniProtKB:P09681|UniProtKB:P48756|ensembl:ENSMUSP00000099446|ensembl:ENSP00000350005150520179 EnsemblGO_REF:0000107
GipSquirreladult locomotory behavior acts_upstream_of_or_withinIEAUniProtKB:P48756|ensembl:ENSMUSP00000099446150520179 EnsemblGO_REF:0000107
GipSquirreldigestive system development  ISORGD:27099068941 RGDPMID:8674860|REF_RGD_ID:2312540
GipSquirrelendocrine pancreas development acts_upstream_of_or_withinIEAUniProtKB:P48756|ensembl:ENSMUSP00000099446150520179 EnsemblGO_REF:0000107
GipSquirrelexploration behavior acts_upstream_of_or_withinIEAUniProtKB:P48756|ensembl:ENSMUSP00000099446150520179 EnsemblGO_REF:0000107
GipSquirrelfemale pregnancy  ISORGD:27099068941 RGDPMID:7716131|REF_RGD_ID:2312542
GipSquirrelgastric inhibitory peptide signaling pathway involved_inIEAUniProtKB:P09681|ensembl:ENSP00000350005150520179 EnsemblGO_REF:0000107
GipSquirrellong-term synaptic potentiation  ISORGD:27099068941 RGDPMID:18234983|REF_RGD_ID:2312531
GipSquirrelmemory acts_upstream_of_or_withinIEAUniProtKB:P48756|ensembl:ENSMUSP00000099446150520179 EnsemblGO_REF:0000107
GipSquirrelpositive regulation of cAMP/PKA signal transduction  ISORGD:27099068941 RGDPMID:8958204|REF_RGD_ID:2312537
GipSquirrelpositive regulation of D-glucose transmembrane transport  ISORGD:27099068941 RGDPMID:8843773|REF_RGD_ID:2312539
GipSquirrelpositive regulation of insulin secretion  ISORGD:27099068941 RGDPMID:8958204|REF_RGD_ID:2312537
GipSquirrelpositive regulation of insulin secretion involved_inIEAUniProtKB:P48756|ensembl:ENSMUSP00000099446150520179 EnsemblGO_REF:0000107
GipSquirrelpositive regulation of synaptic transmission  ISORGD:27099068941 RGDPMID:18234983|REF_RGD_ID:2312531
GipSquirrelregulation of fatty acid biosynthetic process involved_inIEAInterPro:IPR039078150520179 InterProGO_REF:0000002
GipSquirrelregulation of insulin secretion involved_inIEAInterPro:IPR039078150520179 InterProGO_REF:0000002
GipSquirrelresponse to acidic pH  ISORGD:27099068941HClRGDPMID:34554|REF_RGD_ID:2312536
GipSquirrelresponse to amino acid  ISORGD:27099068941intragastric tryptophanRGDPMID:6376308|REF_RGD_ID:2312545
GipSquirrelresponse to axon injury  ISORGD:27099068941 RGDPMID:19170165|REF_RGD_ID:2312528
GipSquirrelresponse to carbohydrate  ISORGD:27099068941 RGDPMID:18685191|REF_RGD_ID:2312530
1 to 20 of 31 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GipSquirrelextracellular region located_inIEAInterPro:IPR000532150520179 InterProGO_REF:0000002
GipSquirrelextracellular region located_inIEAUniProtKB-KW:KW-0964150520179 UniProtGO_REF:0000043
GipSquirrelextracellular region located_inIEAUniProtKB-SubCell:SL-0243150520179 UniProtGO_REF:0000044
GipSquirrelextracellular space located_inIEAPANTHER:PTN000390766150520179 TreeGrafterGO_REF:0000118
GipSquirrelextracellular space  ISORGD:27099068941 RGDPMID:19520739|REF_RGD_ID:2312527
GipSquirrelneuronal cell body  ISORGD:27099068941 RGDPMID:19170165|REF_RGD_ID:2312528

Molecular Function
1 to 9 of 9 rows

  
Object Symbol
Species
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Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GipSquirrelgastric inhibitory polypeptide receptor binding enablesIEAUniProtKB:P09681|ensembl:ENSP00000350005150520179 EnsemblGO_REF:0000107
GipSquirrelglucagon receptor binding enablesIEAPANTHER:PTN000390766150520179 TreeGrafterGO_REF:0000118
GipSquirrelhormone activity enablesIEAInterPro:IPR000532150520179 InterProGO_REF:0000002
GipSquirrelhormone activity enablesIEAUniProtKB-KW:KW-0372150520179 UniProtGO_REF:0000043
GipSquirrelprotein binding enablesISOUniProtKB:P485469068941 PMID:17715056IntActPMID:17715056
GipSquirrelprotein binding enablesISOUniProtKB:O43765|UniProtKB:Q6UY14-3|UniProtKB:Q7Z3S99068941 PMID:25416956IntActPMID:25416956
GipSquirrelprotein binding enablesISOUniProtKB:O43765|UniProtKB:Q96EQ09068941 PMID:32296183IntActPMID:32296183
GipSquirrelreceptor ligand activity enablesIEAUniProtKB:P48756|ensembl:ENSMUSP00000099446150520179 EnsemblGO_REF:0000107
GipSquirrelsignaling receptor binding  ISORGD:27099068941 RGDPMID:8958204|REF_RGD_ID:2312537
1 to 9 of 9 rows

PMID:22301074   PMID:30032202  



Gip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560224,581,725 - 24,588,955 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649012,487,025 - 12,492,214 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649012,487,025 - 12,492,214 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GIP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381748,958,554 - 48,968,596 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1748,958,554 - 48,968,596 (-)EnsemblGRCh38hg38GRCh38
GRCh371747,035,916 - 47,045,958 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361744,390,917 - 44,400,954 (-)NCBINCBI36Build 36hg18NCBI36
Build 341744,390,916 - 44,400,954NCBI
Celera1743,490,595 - 43,500,198 (-)NCBICelera
Cytogenetic Map17q21.32NCBI
HuRef1742,403,606 - 42,413,192 (-)NCBIHuRef
CHM1_11747,101,692 - 47,111,260 (-)NCBICHM1_1
T2T-CHM13v2.01749,822,260 - 49,831,965 (-)NCBIT2T-CHM13v2.0
Gip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391195,915,358 - 95,921,657 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1195,915,371 - 95,921,657 (+)EnsemblGRCm39 Ensembl
GRCm381196,024,532 - 96,030,831 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1196,024,545 - 96,030,831 (+)EnsemblGRCm38mm10GRCm38
MGSCv371195,885,859 - 95,892,142 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361195,840,635 - 95,846,918 (+)NCBIMGSCv36mm8
Celera11105,675,017 - 105,681,265 (+)NCBICelera
Cytogenetic Map11DNCBI
cM Map1159.21NCBI
Gip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81081,465,070 - 81,473,216 (+)NCBIGRCr8
mRatBN7.21080,968,360 - 80,976,506 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1080,968,352 - 80,976,503 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1085,916,682 - 85,924,796 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01085,414,718 - 85,422,832 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01080,807,160 - 80,815,278 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01083,835,080 - 83,848,399 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1083,840,303 - 83,848,396 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01083,645,328 - 83,653,501 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41084,732,705 - 84,740,801 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11084,747,074 - 84,755,168 (+)NCBI
Celera1079,736,495 - 79,744,591 (+)NCBICelera
Cytogenetic Map10q26NCBI
Gip
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495545112,390,938 - 12,396,599 (+)NCBIChiLan1.0ChiLan1.0
GIP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21916,135,817 - 16,144,574 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11718,101,423 - 18,110,166 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0178,573,104 - 8,580,424 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1178,554,736 - 8,561,849 (+)NCBIpanpan1.1PanPan1.1panPan2
GIP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1925,167,938 - 25,174,402 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl925,167,926 - 25,174,575 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha924,630,394 - 24,634,273 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0925,964,527 - 25,968,409 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1924,732,107 - 24,736,221 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0924,990,580 - 24,994,696 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0925,119,509 - 25,123,597 (-)NCBIUU_Cfam_GSD_1.0
GIP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1225,160,789 - 25,167,940 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11225,160,783 - 25,167,952 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21225,126,659 - 25,133,815 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GIP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11669,367,030 - 69,377,563 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1669,367,207 - 69,377,155 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607740,470,887 - 40,480,917 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gip
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247955,332,071 - 5,333,992 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247955,331,214 - 5,333,425 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.





RefSeq Transcripts XM_005321706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040268264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSTOT00000004027   ⟹   ENSSTOP00000003611
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649012,487,025 - 12,492,214 (+)Ensembl
RefSeq Acc Id: XM_005321706   ⟹   XP_005321763
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560224,582,925 - 24,588,955 (-)NCBI
SpeTri2.0NW_00493649012,487,025 - 12,492,214 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040268264   ⟹   XP_040124198
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560224,581,725 - 24,588,955 (-)NCBI
Protein RefSeqs XP_005321763 (Get FASTA)   NCBI Sequence Viewer  
  XP_040124198 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000003611.3
GenBank Protein KAG3269187 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005321763   ⟸   XM_005321706
- Peptide Label: isoform X2
- UniProtKB: I3M3G3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040124198   ⟸   XM_040268264
- Peptide Label: isoform X1
- UniProtKB: I3M3G3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSSTOP00000003611   ⟸   ENSSTOT00000004027


1 to 12 of 12 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSTOG00000004043 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000004027.3 UniProtKB/TrEMBL
Gene3D-CATH 6.10.250.590 UniProtKB/TrEMBL
InterPro GIP UniProtKB/TrEMBL
  Glucagon_GIP_secretin_VIP UniProtKB/TrEMBL
NCBI Gene Gip ENTREZGENE
PANTHER GASTRIC INHIBITORY POLYPEPTIDE UniProtKB/TrEMBL
  PTHR15211 UniProtKB/TrEMBL
Pfam Hormone_2 UniProtKB/TrEMBL
PROSITE GLUCAGON UniProtKB/TrEMBL
SMART GLUCA UniProtKB/TrEMBL
UniProt I3M3G3 ENTREZGENE, UniProtKB/TrEMBL
1 to 12 of 12 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-09 Gip  gastric inhibitory polypeptide  LOC101970436  gastric inhibitory polypeptide  Symbol and/or name change 5135510 APPROVED
2021-03-26 LOC101970436  gastric inhibitory polypeptide  Gip  gastric inhibitory polypeptide  Symbol and/or name change 5135510 APPROVED