Lman1 (lectin, mannose binding 1)

Gene: Lman1 (lectin, mannose binding 1) Ictidomys tridecemlineatus

Analyze

Symbol:

Lman1

Name:

lectin, mannose binding 1

RGD ID:

12632260

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); metal ion binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endoplasmic reticulum organization (ortholog); negative regulation of protein targeting to mitochondrion (ortholog); PARTICIPATES IN protein secretory pathway; ASSOCIATED WITH factor V deficiency (ortholog); factor XIII deficiency (ortholog); Familial Multiple Coagulation Factor Deficiency I (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	30,144,591 - 30,169,193 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936497	5,383,524 - 5,408,452 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936497	5,383,636 - 5,409,347 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

factor V deficiency (ISO)

factor XIII deficiency (ISO)

Familial Multiple Coagulation Factor Deficiency I (ISO)

genetic disease (ISO)

immunodeficiency 12 (ISO)

isolated microphthalmia 3 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

early endosome to Golgi transport (ISO)

endoplasmic reticulum organization (IEA,ISO)

endoplasmic reticulum to Golgi vesicle-mediated transport (IEA)

Golgi organization (IEA)

negative regulation of protein targeting to mitochondrion (ISO)

positive regulation of organelle organization (IEA)

protein exit from endoplasmic reticulum (ISO)

Cellular Component

COPII-coated ER to Golgi transport vesicle (IEA)

endoplasmic reticulum (IEA)

endoplasmic reticulum membrane (IEA)

endoplasmic reticulum-Golgi intermediate compartment (IEA,ISO)

Golgi apparatus (IEA)

Golgi membrane (IEA)

membrane (IEA)

sarcomere (IEA)

Molecular Function

identical protein binding (ISO)

mannose binding (IEA)

metal ion binding (ISO)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

protein secretory pathway (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Lman1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	30,144,591 - 30,169,193 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936497	5,383,524 - 5,408,452 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936497	5,383,636 - 5,409,347 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LMAN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	59,327,823 - 59,359,265 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	59,327,823 - 59,359,265 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	56,995,055 - 57,026,497 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	55,148,088 - 55,177,463 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	55,148,087 - 55,177,461	NCBI
Celera	18	53,712,874 - 53,744,326 (-)	NCBI		Celera
Cytogenetic Map	18	q21.32	NCBI
HuRef	18	53,704,319 - 53,735,757 (-)	NCBI		HuRef
CHM1_1	18	56,990,302 - 57,021,756 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	59,529,314 - 59,560,731 (-)	NCBI		T2T-CHM13v2.0

Lman1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	66,113,810 - 66,135,706 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	66,113,809 - 66,155,651 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	65,980,739 - 66,002,635 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	65,980,738 - 66,022,580 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	66,140,393 - 66,162,289 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	66,106,123 - 66,127,980 (-)	NCBI		MGSCv36	mm8
Celera	18	67,256,677 - 67,278,706 (-)	NCBI		Celera
Cytogenetic Map	18	E1	NCBI
cM Map	18	39.08	NCBI

Lman1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	61,778,971 - 61,800,960 (-)	NCBI		GRCr8
mRatBN7.2	18	59,508,996 - 59,530,873 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	59,508,996 - 59,530,851 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	61,604,527 - 61,624,705 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	62,303,213 - 62,323,391 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	60,131,092 - 60,151,186 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	61,683,377 - 61,707,344 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	61,685,117 - 61,707,317 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	60,880,943 - 60,901,877 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	62,504,296 - 62,524,151 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	62,577,496 - 62,597,352 (+)	NCBI
Celera	18	57,631,372 - 57,651,369 (-)	NCBI		Celera
Cytogenetic Map	18	q12.1	NCBI

Lman1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	43,464,722 - 43,496,048 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	43,465,556 - 43,495,789 (-)	NCBI	ChiLan1.0	ChiLan1.0

LMAN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	76,873,237 - 76,904,670 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	62,565,851 - 62,597,200 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	52,722,735 - 52,754,013 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	56,049,292 - 56,080,531 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	56,049,292 - 56,080,533 (-)	Ensembl	panpan1.1		panPan2

LMAN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	16,869,106 - 16,897,911 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	16,869,121 - 16,894,786 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	17,844,723 - 17,873,524 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	16,746,349 - 16,775,132 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	16,746,354 - 16,773,529 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	16,781,955 - 16,810,766 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	16,702,460 - 16,731,329 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	16,964,186 - 16,993,012 (+)	NCBI		UU_Cfam_GSD_1.0

LMAN1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	161,607,143 - 161,631,651 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	161,607,122 - 161,631,650 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	179,184,985 - 179,209,552 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LMAN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	20,377,259 - 20,409,565 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	20,377,255 - 20,409,741 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666060	5,179,049 - 5,212,921 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lman1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624792	4,732,446 - 4,776,041 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624792	4,732,476 - 4,775,946 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005323019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013357604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000013135 ⟹ ENSSTOP00000011774

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936497	5,383,524 - 5,408,452 (+)	Ensembl

RefSeq Acc Id:

XM_005323019 ⟹ XP_005323076

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404944	30,144,591 - 30,168,228 (+)	NCBI
SpeTri2.0	NW_004936497	5,383,636 - 5,404,922 (+)	NCBI

Sequence:

show sequence

GCCGGCCTCTGCGTCCCAGAATCCAAGATGGCGGGATCCAGGCTAAGGGGTCCCCAGGCCAGAG
CCTTGCCGCTTCTCTGCGCCCTGCTGCTGTCACTCAGTCGCTTCGTCCGGGGCGACGGCATGGG
AGGCGACCCCGCGGCCGCCGGTGCTGCGGACACGCCGGCTGTGATGCCACATCGCCGTTTCGAG
TACAAATACAGCTTCAAGGGGCCGCACCTGGTGCAGAGCGATGGGACCGTGCCCTTCTGGGCCC
ACGCGGGGAATGCTATTGCAAGTTCAGATCAAATTCGAATAGCACCATCTTTAAAAAGCCAAAG
AGGGTCAGTGTGGACAAAGACAAAAGCAGCCTTTGAGAACTGGGAATTGGAGGTGACATTTCGA
GTGACTGGAAGAGGTCGAATTGGAGCCGATGGCCTAGCAGTTTGGTATACAGAAAATCAAGGCT
TGGAGGGCCCTGTGTTTGGATCAGCTGATATGTGGAATGGCGTTGGAATATTTTTTGATTCTTT
TGACAATGATGGAAAGAAAAATAATCCTGCTATAGTTATTGTAGGCAACAATGGACAAATCCAT
TATGACCATCAAAATGATGGTGCCACGCAAGCCCTAGCAAGTTGTCTGAGGGACTTTCGCAATA
AACCCTATCCTGTTCGGGCGAAGATTGTATATTACCAGAAAACTCTGACAGTAATGATCAATAA
TGGCTTTACACCAAATAGAAATGATTATGAATTTTGCGCCAAAGTAGAAAATATGGTGATCCCT
CCACAAGGGTATTTTGGAATATCTGCTGCAACGGGAGGTCTTGCAGATGACCATGATGTTCTTT
CTTTTCTGACTTTCCAATTGACTGAGCCTGGAAAGGAGCCACCTACACCAGATAAAGAAATTTC
AGAAAAAGAAAAAGAAAAGTATCAGGAGGAATTTGAGCACTTTCAACAAGAATTGGACAAAAAA
AAAGAGGAATTCCAGAAGGATCACCCTGACCTTCAGGGACAACCTGCGGATGAAATATTTGAGA
GTGTAGGAGATCGTGAGCTAAGACAAATCTTTGAAGGACAGAATCGTATTCATCTTGAAATTAA
GCAGCTGAACCGACAATTAGATATGATTCTTGATGAACAGAGAAGATATGTCTCTTCCCTGACA
GAAGAAATATCTAAGAGAGGAGCAGGGATCCCAGGGCAGCATGGGCAGATCACTCAACAAGAAT
TGGATACTGTTGTGAAAACTCAGCATGAGATTCTGAGACAAGTAAATGAAATGAAGAATTCCAT
GAGTGAAACTGTCAGACTGGTCAGTGGGATACAGCACCCCAGTTCTGCAGGAGGAGTCTATGAG
ACCACACAGCACTTCATGGACATCAAGGAGCACCTGCACATAGTGAAGAGGGACATAGACAACT
TAGTACAGCGAAATGTGCCATCCAATGAAAGATCAAAATGCCCAGAACTACCACCATTTCCATC
ATGTTTATCGACGGTTCACTTCATCGTATTTGTAATTGTACAGACACTGCTGTTCATTGGTTAC
ATCATGTATAGGACTCAGCAAGAAGCAGCTGCCAAAAAATTCTTTTGACCACCATTTTCATGTG
TGTACATCATGTATGTATGTACAAAATGTCTTTTTGAGGGACTTATAAGTATTTAAATTACTTC
ATAGTCTAAATTATTAAATTTTATATAAAATAAAACATTGTTTAAACATTGATTTTTTTTTCGG
TAAGAATAAACCTTAAAGATAACCACA

hide sequence

RefSeq Acc Id:

XM_013357604 ⟹ XP_013213058

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404944	30,144,591 - 30,169,193 (+)	NCBI
SpeTri2.0	NW_004936497	5,383,636 - 5,409,347 (+)	NCBI

Sequence:

show sequence

GCCGGCCTCTGCGTCCCAGAATCCAAGATGGCGGGATCCAGGCTAAGGGGTCCCCAGGCCAGAG
CCTTGCCGCTTCTCTGCGCCCTGCTGCTGTCACTCAGTCGCTTCGTCCGGGGCGACGGCATGGG
AGGCGACCCCGCGGCCGCCGGTGCTGCGGACACGCCGGCTGTGATGCCACATCGCCGTTTCGAG
TACAAATACAGCTTCAAGGGGCCGCACCTGGTGCAGAGCGATGGGACCGTGCCCTTCTGGGCCC
ACGCGGGGAATGCTATTGCAAGTTCAGATCAAATTCGAATAGCACCATCTTTAAAAAGCCAAAG
AGGGTCAGTGTGGACAAAGACAAAAGCAGCCTTTGAGAACTGGGAATTGGAGGTGACATTTCGA
GTGACTGGAAGAGGTCGAATTGGAGCCGATGGCCTAGCAGTTTGGTATACAGAAAATCAAGGCT
TGGAGGGCCCTGTGTTTGGATCAGCTGATATGTGGAATGGCGTTGGAATATTTTTTGATTCTTT
TGACAATGATGGAAAGAAAAATAATCCTGCTATAGTTATTGTAGGCAACAATGGACAAATCCAT
TATGACCATCAAAATGATGGTGCCACGCAAGCCCTAGCAAGTTGTCTGAGGGACTTTCGCAATA
AACCCTATCCTGTTCGGGCGAAGATTGTATATTACCAGAAAACTCTGACAGTAATGATCAATAA
TGGCTTTACACCAAATAGAAATGATTATGAATTTTGCGCCAAAGTAGAAAATATGGTGATCCCT
CCACAAGGGTATTTTGGAATATCTGCTGCAACGGGAGGTCTTGCAGATGACCATGATGTTCTTT
CTTTTCTGACTTTCCAATTGACTGAGCCTGGAAAGGAGCCACCTACACCAGATAAAGAAATTTC
AGAAAAAGAAAAAGAAAAGTATCAGGAGGAATTTGAGCACTTTCAACAAGAATTGGACAAAAAA
AAAGAGGAATTCCAGAAGGATCACCCTGACCTTCAGGGACAACCTGCGGATGAAATATTTGAGA
GTGTAGGAGATCGTGAGCTAAGACAAATCTTTGAAGGACAGAATCGTATTCATCTTGAAATTAA
GCAGCTGAACCGACAATTAGATATGATTCTTGATGAACAGAGAAGATATGTCTCTTCCCTGACA
GAAGAAATATCTAAGAGAGGAGCAGGGATCCCAGGGCAGCATGGGCAGATCACTCAACAAGAAT
TGGATACTGTTGTGAAAACTCAGCATGAGATTCTGAGACAAGTAAATGAAATGAAGAATTCCAT
GAGTGAAACTGTCAGACTGGTCAGTGGGATACAGCACCCCAGTTCTGCAGGAGGAGTCTATGAG
ACCACACAGCACTTCATGGACATCAAGGAGCACCTGCACATAGTGAAGAGGGACATAGACAACT
TAGTACAGCGAAATGTGCCATCCAATGAAAGATCAAAATGCCCAGAACTACCACCATTTCCATC
ATGTTTATCGACGGTTCACTTCATCGTATTTGTAATTGTACAGACACTGCTGTTCATTGGTTAC
ATCATGTATAGGACTCAGCAAGAAGCAGCTGCCAAAAAATTCTTTTGACCACCATTTTCATGTG
TGTACATCATGTGATCTGCCTCCTGTGGCGTCAACAAATGGAAGGGAAAATGGAGAAAGTAGAA
ATGGCATTTGTTAAATATTTACTCTTGCTGGTAATGAAAAGTACATATTAAAAACAATATATTT
GATGTTTTCACCTTCAATAACCAAATGCTGGCAAAAGTATAGTTAAGCTGGAACTCTTTGTTGT
TATTAGTTACTGGCAATTTTTTAAATCTTTTTTTTTTCCCCCAAATACCATTAACCTAGTGAAA
CTGGGTTTGAGTCTTGGCTCTGCAACTTACTAGAGGTGGTTTTCAGTATCATCATAATCTTACA
TCGTTGTTAGCATTGTAAAAGAGAGTCTTTATAAAGAGATTTCAAAAAGTAACATACTAAGTTA
ATGGATCCCTTTCCTCTATAAACATAAAGAAATGCTGGATAAAAGATTTAAATACATAGATGAG
TATGAAAGAAATTAGAATTTAAAGATTGATTAGGGAGCTTGCTAGGGGTAAGGATAGCAAAAAC
TAAACTATATAAGCCCTGATACTGTGGTTGGAGGATATGTTCAGCTGGAGCTTGAGGGATGTGG
TTTTGGGCCTGGAAAACCCATTAGGTTTGAGCTAAGATGCTCAGATAAAGTTAGGACCCTGGCA
AGTTGCTCCTTCAGTGGAAGTGGGCTAACAGAACCTTACACCCTGATGACAAGAGAAAACATAA
CAATCGTCTCTCCTTGGGGTTCTGGATAGGGAATAAAATTCTCTATAAGAAATTAAAGACCCAG
CCTCATGCTTTATGCCATTGTAGCATCCAAATGACCTGCATGGTGTGGAATTTTCCAAGCCAAA
ACTAAATTAGTTCTGGTCTGGTAAATTCTAGGAGGCGGCAAAACAAAAGCACTCTTTAGCAATA
ATTCCACAACAAAAGCACATCAGACAACCCAGAACATCTAGTCCTAACTGAAATGAGCTCTAAA
AATCATACCCCGAACAAGAAAAATGTGAAAGAAATAGTAAATAAAAAACTTGGCACCTCCAAGA
ATCTGGGGTAACAGTGACAAAGAAAACCAATATGTACACTGTAAATGAGTTCAAAAGACTTGAG
TTTATTTAGACTAGAAATTATAAGGAAGGAAGGGAACACTGAAAAGAAGAGTAAGAAGTTATCT
TGGTAGTTAACTTTAATACCCAGAGAACTTAAAATATGGGCAGAAAGATTAAATTGGACACTGC
TGAAAAAATGATTGCATTATATGTAAGAAGTCTGAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005323076	(Get FASTA)	NCBI Sequence Viewer
	XP_013213058	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000011774.2

RefSeq Acc Id:

XP_013213058 ⟸ XM_013357604

- UniProtKB:

I3MKG2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAGSRLRGPQARALPLLCALLLSLSRFVRGDGMGGDPAAAGAADTPAVMPHRRFEYKYSFKGPH
LVQSDGTVPFWAHAGNAIASSDQIRIAPSLKSQRGSVWTKTKAAFENWELEVTFRVTGRGRIGA
DGLAVWYTENQGLEGPVFGSADMWNGVGIFFDSFDNDGKKNNPAIVIVGNNGQIHYDHQNDGAT
QALASCLRDFRNKPYPVRAKIVYYQKTLTVMINNGFTPNRNDYEFCAKVENMVIPPQGYFGISA
ATGGLADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKDHP
DLQGQPADEIFESVGDRELRQIFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAG
IPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVRLVSGIQHPSSAGGVYETTQHFMDIK
EHLHIVKRDIDNLVQRNVPSNERSKCPELPPFPSCLSTVHFIVFVIVQTLLFIGYIMYRTQQEA
AAKKFF

hide sequence

RefSeq Acc Id:

XP_005323076 ⟸ XM_005323019

- UniProtKB:

I3MKG2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAGSRLRGPQARALPLLCALLLSLSRFVRGDGMGGDPAAAGAADTPAVMPHRRFEYKYSFKGPH
LVQSDGTVPFWAHAGNAIASSDQIRIAPSLKSQRGSVWTKTKAAFENWELEVTFRVTGRGRIGA
DGLAVWYTENQGLEGPVFGSADMWNGVGIFFDSFDNDGKKNNPAIVIVGNNGQIHYDHQNDGAT
QALASCLRDFRNKPYPVRAKIVYYQKTLTVMINNGFTPNRNDYEFCAKVENMVIPPQGYFGISA
ATGGLADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEEFEHFQQELDKKKEEFQKDHP
DLQGQPADEIFESVGDRELRQIFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISKRGAG
IPGQHGQITQQELDTVVKTQHEILRQVNEMKNSMSETVRLVSGIQHPSSAGGVYETTQHFMDIK
EHLHIVKRDIDNLVQRNVPSNERSKCPELPPFPSCLSTVHFIVFVIVQTLLFIGYIMYRTQQEA
AAKKFF

hide sequence

RefSeq Acc Id:

ENSSTOP00000011774 ⟸ ENSSTOT00000013135

Protein Domains

L-type lectin-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000013136	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000013135.3	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.200	UniProtKB/TrEMBL
InterPro	ConA-like_dom_sf	UniProtKB/TrEMBL
	Lectin_leg	UniProtKB/TrEMBL
NCBI Gene	Lman1	ENTREZGENE
PANTHER	PTHR12223:SF32	UniProtKB/TrEMBL
	VESICULAR MANNOSE-BINDING LECTIN	UniProtKB/TrEMBL
Pfam	Lectin_leg-like	UniProtKB/TrEMBL
PROSITE	L_LECTIN_LIKE	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49899	UniProtKB/TrEMBL
UniProt	I3MKG2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

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RGD Manual Annotations