Wrnip1 (WRN helicase interacting protein 1)

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Gene: Wrnip1 (WRN helicase interacting protein 1) Ictidomys tridecemlineatus

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Symbol:

Wrnip1

Name:

WRN helicase interacting protein 1

RGD ID:

12629321

Description:

ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); DNA binding (inferred); INVOLVED IN DNA duplex unwinding (inferred); DNA repair (inferred); DNA replication (inferred); FOUND IN chromosome, telomeric region (inferred); nucleus (inferred); perinuclear region of cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ATPase WRNIP1; Werner helicase interacting protein 1; Werner helicase interacting protein 1, transcript variant X1; Werner helicase interacting protein 1, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	22,746,687 - 22,767,469 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936633	3,853,058 - 3,874,121 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936633	3,853,201 - 3,873,983 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA duplex unwinding (IEA)

DNA repair (IEA)

DNA replication (IEA)

DNA synthesis involved in DNA repair (IEA)

DNA-templated DNA replication (IEA)

regulation of DNA-templated DNA replication initiation (IEA)

Cellular Component

chromosome, telomeric region (IEA)

nucleus (IEA)

perinuclear region of cytoplasm (IEA)

Molecular Function

ATP binding (IEA)

ATP hydrolysis activity (IEA)

DNA binding (IEA)

enzyme activator activity (IEA)

identical protein binding (IEA)

metal ion binding (IEA)

protein binding (ISO)

single-stranded DNA helicase activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Wrnip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	22,746,687 - 22,767,469 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936633	3,853,058 - 3,874,121 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936633	3,853,201 - 3,873,983 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WRNIP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	2,765,393 - 2,786,952 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	2,765,393 - 2,786,952 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	2,765,627 - 2,787,186 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	2,710,665 - 2,730,978 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	2,710,664 - 2,730,977	NCBI
Celera	6	3,994,624 - 4,014,940 (+)	NCBI		Celera
Cytogenetic Map	6	p25.2	NCBI
HuRef	6	2,638,804 - 2,659,415 (+)	NCBI		HuRef
CHM1_1	6	2,768,240 - 2,788,553 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	2,631,255 - 2,653,114 (+)	NCBI		T2T-CHM13v2.0

Wrnip1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	32,986,013 - 33,006,593 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	32,986,021 - 33,006,592 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	32,802,030 - 32,822,610 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	32,802,038 - 32,822,609 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	32,893,899 - 32,914,479 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	32,809,503 - 32,830,074 (+)	NCBI		MGSCv36	mm8
Celera	13	33,010,944 - 33,032,851 (+)	NCBI		Celera
Cytogenetic Map	13	A3.2	NCBI
cM Map	13	13.74	NCBI

Wrnip1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	31,830,159 - 31,850,408 (-)	NCBI		GRCr8
mRatBN7.2	17	31,621,410 - 31,641,659 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	31,621,411 - 31,641,659 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	31,456,553 - 31,476,744 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	33,060,327 - 33,080,518 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	31,452,320 - 31,472,509 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	32,933,395 - 32,953,641 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	32,933,396 - 32,953,641 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	34,825,601 - 34,845,847 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	37,982,094 - 38,002,342 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	37,984,934 - 38,005,183 (-)	NCBI
Celera	17	31,183,744 - 31,203,992 (-)	NCBI		Celera
Cytogenetic Map	17	p12	NCBI

Wrnip1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955465	10,574,551 - 10,593,780 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955465	10,574,601 - 10,594,570 (-)	NCBI	ChiLan1.0	ChiLan1.0

WRNIP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	17,391,235 - 17,412,245 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	13,383,335 - 13,403,453 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	2,587,170 - 2,608,179 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	2,688,066 - 2,711,062 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	2,691,235 - 2,711,062 (+)	Ensembl	panpan1.1		panPan2

WRNIP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	3,103,507 - 3,127,657 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	3,103,418 - 3,127,504 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	35	3,110,859 - 3,135,627 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	35	3,158,467 - 3,183,106 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	35	3,158,020 - 3,183,103 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	35	3,034,380 - 3,058,999 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	35	3,056,962 - 3,081,532 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	35	4,389,321 - 4,413,936 (+)	NCBI		UU_Cfam_GSD_1.0

WRNIP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	1,656,984 - 1,667,879 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	1,656,952 - 1,667,885 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	1,752,826 - 1,766,919 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

WRNIP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	69,366,565 - 69,386,950 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	69,366,389 - 69,386,932 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	2,711,607 - 2,732,063 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Wrnip1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624756	22,034,137 - 22,054,253 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624756	22,034,252 - 22,054,236 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005335162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013362803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000026623 ⟹ ENSSTOP00000015001

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936633	3,853,058 - 3,874,121 (+)	Ensembl

RefSeq Acc Id:

XM_005335162 ⟹ XP_005335219

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	22,746,687 - 22,767,469 (-)	NCBI
SpeTri2.0	NW_004936633	3,853,201 - 3,873,983 (+)	NCBI

Sequence:

show sequence

GCGAGGCGATGTCCCCGGCGGGACAAACGGTCGTGGACTACACATCCCGACGCGCCGCGAGAGG
CGTTACCAGCGGCCGGCCAAGGGCGGGCCGATGCGGGAGCTCCGGACGTGAGGCATGAGCGGCG
CCCTCCCTCGGCCCGTGCGCGTTCTGCCGCCTCCCCGATCGAGGGTCGCGCGGCACGGGGCCTA
GCGGCGGGCATCTGAGGCCTCGGCGTTCTCAGGGGCAGGTGCGGCCGCGCCGGGCGCCGGGGAG
GGCGACGGCCGCCATGGAGGTGAGCGGGCCGGAAGACGACCCCTTTCTATCGCAGCTGCACCAG
GTGCAGTGCCCCGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAACTCACACCTGGACCGCT
GCCTGCTGCTCCACCCCGCGGGGCACGCGGAGCCTGCGGCCGGGCCGCACCGCGCCGGGGAGCG
GGCCAAAGGGCCCTCGCCACCTGGCGCCAAGCGGCGGCGGCTGTCGGAGAGCTCGGCGCTGAAG
CAACCGGCCACCCCGACGGCGGCAGAGAGCAGCGAGGGCGAGGGCGAGGAGGGCGACGACGGTG
GTGAGACCGAGAGCCGGGAGAGCTACGATGCGCCGCCCACGCCCAGTGGCGCCCGCCTGATCCC
CGACTTCCCGGTGGCCCGTTCCAGCAGCCCCGCGAGGAAGGGGGCGGGCAAGAGGCCGGCTGCC
GCGGCCGCAGCGGCGGGGAGCGCGTCTCCGCGCAGCTGGGACGAAGCGGAGGCGCAGGAGGAGG
AAGAGGCGGGGGGCGACGGCGATGGCGACGCGGACGCGGACGGCGAGGACGACCCGGGGCACTG
GGACGCGGACGCCGCAGACGCCGCCTTCGGGGCCAGCGGCGGGGGCCGCCCGCATTCGCGGGCG
CTGGCGGCGGAGGAAATCCGGCAGATGCTGGAGGGCAAGCCGCTGGCGGACAAGATGCGACCTG
ACGCGCTGCAGGACTACATCGGGCAGAGCCGGGCGGTGGGGCAGGAGACCCTGCTGCGCTCGCT
CCTGGAGACCAACGAAATCCCCTCGCTCATCCTGTGGGGACCGCCGGGCTGCGGCAAGACCACC
CTGGCTCATATCATAGCCAACAACAGCAAGAAACATAGCATAAGGTTTGTGACATTGTCTGCAA
CAAATGCCAAGACAAATGATGTTCGAGATGTCATTAAACAAGCTCAAAATGAAAAGAGCTTTTT
CAAAAGGAAAACCATCCTTTTTATTGATGAGATTCATCGGTTCAATAAATCTCAGCAGGATACT
TTCCTTCCTCACGTGGAATGTGGGACGATCACCCTGATTGGGGCCACCACTGAAAACCCTTCCT
TCCAGGTCAATGCAGCTCTTCTGAGCCGCTGTCGAGTGATTGTTCTTGAGAAACTTCCAGTAGA
GGCAATGGTGACTATTTTAATGAGAGCAATCAACTCACTGGGAATTCATGTCCTAGACTCTAGC
CGTCCCACTGACCCTCTGAGCCACAGCAGCAACAGCAGCTCTGAACCCTCCGTGTTTATAGAAG
ATAAAGCAGTAGATACTCTTGCTTATCTCAGTGATGGGGATGCCCGAACTGGCTTGAACGGACT
GCAGCTGGCAGTGCTGGCCAGGTTAAGCTCTAGGAAGATGTTCTGTAAGAAGAGTGGACAAACC
TATTCTCCCAGTAGAGTTCTGATCACTGAGAATGATGTGAAGGAAGGTCTTCAGCGATCCCACA
TTTTATATGACCGGGCAGGAGAAGAGCACTACAACTGCATCTCCGCCTTGCACAAGGCCATGCG
AGGCTCGGACCAGAATGCTTCCCTCTACTGGCTGGCACGCATGCTTGAGGGAGGAGAGGACCCA
CTCTATGTGGCAAGGAGGCTGGTGAGGTTTGCCAGTGAGGACATCGGTCTGGCAGACCCGTCTG
CATTAACACAAGCAGTTGCTGCCTACCAAGGCTGTCATTTTATAGGCATGCCTGAATGTGAGGT
GCTTCTGGCCCAGTGTGTGGTCTATTTCGCGAGAGCCCCAAAGTCCATTGAGGTGTACAGCGCT
TATAATAATGTCAAAGCCTGCCTGAGGAACCACCAGGGCCCTCTGCCCCCGGTGCCCCTGCACC
TGAGGAACGCACCAACCAGGCTGATGAAGGATCTGGGCTACGGCAAAGGCTACAAGTACAACCC
CATGTACAGTGAGCCTGTGGATCAGGAATACCTGCCCGAGGAATTGAGAGGAGTCGATTTCTTC
AAGCAGAGGCGGTGCTGACTCTTAGGCAGTGACAGCAGAAGGATGGTCTTTATTGAAGGGAAAG
AGTAACTGGATTGTGAAGTTGGTTGCCTGGTGGAAATTAAAACAGACCAACATTTTGTGCCAGA
AATTTAAGAGTTCCATAGGTGGAGGAGATTACTTCAACTAAATGTGTAACGTTGAAATTGTGTT
CATTTGCACTCTGTGCAATGGTTATGCTTATGAAAATATCTGGCAGCTTTGTGCAATGAATTAA
TGTTATAAGGAATTATCTATTTTGTCATAGTATTTAAGTCATAATGTCATTTCAGAATTCAGTT
CAGTAGGATTTTTTTCCTTTAAAAATGTATATTCTGGGTAGTTCCAATTGTTAAAAAAATGTAA
TTGTGATTTAATACTGCATAGTGTTTTGGGTATTTTTTTTATATGCAAAGGTCTTATGAGCCAA
TAAAACTATTTCAAAGTACTCTTCAGTTCTTAAATGTTTTTCCCACCTAGGATGGTGGGTACCA
ATATTTGTCACCATTGCATTTCAATAGATAGATACTGTAAATCATCATAGATAAGATTGGAAAG
CTTGGGAGAAGTCAATCTGTCTTTCTGAAAATAAATTTTAATTTTTTAAAGAACTGCA

hide sequence

RefSeq Acc Id:

XM_013362803 ⟹ XP_013218257

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	22,747,435 - 22,767,342 (-)	NCBI
SpeTri2.0	NW_004936633	3,853,254 - 3,872,499 (+)	NCBI

Sequence:

show sequence

GCCGCGAGAGGCGTTACCAGCGGCCGGCCAAGGGCGGGCCGATGCGGGAGCTCCGGACGTGAGG
CATGAGCGGCGCCCTCCCTCGGCCCGTGCGCGTTCTGCCGCCTCCCCGATCGAGGGTCGCGCGG
CACGGGGCCTAGCGGCGGGCATCTGAGGCCTCGGCGTTCTCAGGGGCAGGTGCGGCCGCGCCGG
GCGCCGGGGAGGGCGACGGCCGCCATGGAGGTGAGCGGGCCGGAAGACGACCCCTTTCTATCGC
AGCTGCACCAGGTGCAGTGCCCCGTGTGCCAGCAGATGATGCCCGCCGCGCACATCAACTCACA
CCTGGACCGCTGCCTGCTGCTCCACCCCGCGGGGCACGCGGAGCCTGCGGCCGGGCCGCACCGC
GCCGGGGAGCGGGCCAAAGGGCCCTCGCCACCTGGCGCCAAGCGGCGGCGGCTGTCGGAGAGCT
CGGCGCTGAAGCAACCGGCCACCCCGACGGCGGCAGAGAGCAGCGAGGGCGAGGGCGAGGAGGG
CGACGACGGTGGTGAGACCGAGAGCCGGGAGAGCTACGATGCGCCGCCCACGCCCAGTGGCGCC
CGCCTGATCCCCGACTTCCCGGTGGCCCGTTCCAGCAGCCCCGCGAGGAAGGGGGCGGGCAAGA
GGCCGGCTGCCGCGGCCGCAGCGGCGGGGAGCGCGTCTCCGCGCAGCTGGGACGAAGCGGAGGC
GCAGGAGGAGGAAGAGGCGGGGGGCGACGGCGATGGCGACGCGGACGCGGACGGCGAGGACGAC
CCGGGGCACTGGGACGCGGACGCCGCAGACGCCGCCTTCGGGGCCAGCGGCGGGGGCCGCCCGC
ATTCGCGGGCGCTGGCGGCGGAGGAAATCCGGCAGATGCTGGAGGGCAAGCCGCTGGCGGACAA
GATGCGACCTGACGCGCTGCAGGACTACATCGGGCAGAGCCGGGCGGTGGGGCAGGAGACCCTG
CTGCGCTCGCTCCTGGAGACCAACGAAATCCCCTCGCTCATCCTGTGGGGACCGCCGGGCTGCG
GCAAGACCACCCTGGCTCATATCATAGCCAACAACAGCAAGAAACATAGCATAAGGTTTGTGAC
ATTGTCTGCAACAAATGCCAAGACAAATGATGTTCGAGATGTCATTAAACAAGCTCAAAATGAA
AAGAGCTTTTTCAAAAGGAAAACCATCCTTTTTATTGATGAGATTCATCGGTTCAATAAATCTC
AGCAGGATACTTTCCTTCCTCACGTGGAATGTGGGACGATCACCCTGATTGGGGCCACCACTGA
AAACCCTTCCTTCCAGGTCAATGCAGCTCTTCTGAGCCGCTGTCGAGTGATTGTTCTTGAGAAA
CTTCCAGTAGAGGCAATGGTGACTATTTTAATGAGAGCAATCAACTCACTGGGAATTCATGTCC
TAGACTCTAGCCGTCCCACTGACCCTCTGAGCCACAGCAGCAACAGCAGCTCTGAACCCTCCGT
GTTTATAGAAGATAAAGCAGTAGATACTCTTGCTTATCTCAGTGATGGGGATGCCCGAACTGGC
TTGAACGGACTGCAGCTGGCAGTGCTGGCCAGGTTAAGCTCTAGGAAGATGTTCTGTAAGAAGA
GTGGACAAACCTATTCTCCCAGTAGAGTTCTGATCACTGAGAATGATGTGAAGGAAGGTCTTCA
GCGATCCCACATTTTATATGACCGGGCAGGAGAAGAGCACTACAACTGCATCTCCGCCTTGCAC
AAGGCCATGCGAGGCTCGGACCAGAATGCTTCCCTCTACTGGCTGGCACGCATGCTTGAGGGAG
GAGAGGACCCACTCTATGTGGCAAGGAGGCTGGTGAGGTTTGCCAGTGAGGACATCGCCAGGTG
TTGAGGTTTTCGTTGGACAGTTCCTGAGGTAGAAATGGAAGACTCTGGACACCATTTAAAGACA
AAGAACAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTTTGTAAATGTTTTGTTTTTAATGT
ACCCATACTTGTGAATGTCTTCATGGCCTTTGGTCCTCTCAGTATTTGTTTTAGTCTCTTGTTT
TTCCTACTACTAGATATAAAATTTTTACCCACAAGGAGCCAGTTCTGGACACCACAGTTATCAC
TCAGTAAATATTTCTTGAATAAGTTAATGTGATCAATGATCAGTGATAAGTTCCATTTCTTTTG
CTAAATGGGACTATTTTTGTCACCAAGTCTATAAGCAGTTATGGTCTCTGGTTGCGGCAACACG
CGGACAAGTGGGGATGATAGTGTGTGTTGTGACTTAACTCCTTTGTCTCTCTGTGTGTGTGACA
GGTCTGGCAGACCCGTCTGCATTAACACAAGCAGTTGCTGCCTACCAAGGCTGTCATTTTATAG
GCATGCCTGAATGTGAG

hide sequence

RefSeq Acc Id:

XM_040282193 ⟹ XP_040138127

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	22,747,383 - 22,767,342 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005335219	(Get FASTA)	NCBI Sequence Viewer
	XP_013218257	(Get FASTA)	NCBI Sequence Viewer
	XP_040138127	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000015001.1
GenBank Protein	KAG3288794	(Get FASTA)	NCBI Sequence Viewer
	KAG3288795	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005335219 ⟸ XM_005335162
- Peptide Label:	isoform X1
- UniProtKB:	I3MSA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEVSGPEDDPFLSQLHQVQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGPHRAGERAKGP SPPGAKRRRLSESSALKQPATPTAAESSEGEGEEGDDGGETESRESYDAPPTPSGARLIPDFPV ARSSSPARKGAGKRPAAAAAAAGSASPRSWDEAEAQEEEEAGGDGDGDADADGEDDPGHWDADA ADAAFGASGGGRPHSRALAAEEIRQMLEGKPLADKMRPDALQDYIGQSRAVGQETLLRSLLETN EIPSLILWGPPGCGKTTLAHIIANNSKKHSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKT ILFIDEIHRFNKSQQDTFLPHVECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVT ILMRAINSLGIHVLDSSRPTDPLSHSSNSSSEPSVFIEDKAVDTLAYLSDGDARTGLNGLQLAV LARLSSRKMFCKKSGQTYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKAMRGSDQ NASLYWLARMLEGGEDPLYVARRLVRFASEDIGLADPSALTQAVAAYQGCHFIGMPECEVLLAQ CVVYFARAPKSIEVYSAYNNVKACLRNHQGPLPPVPLHLRNAPTRLMKDLGYGKGYKYNPMYSE PVDQEYLPEELRGVDFFKQRRC hide sequence

RefSeq Acc Id:

XP_013218257 ⟸ XM_013362803

- Peptide Label:

isoform X3

- Sequence:

show sequence

MEVSGPEDDPFLSQLHQVQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGPHRAGERAKGP
SPPGAKRRRLSESSALKQPATPTAAESSEGEGEEGDDGGETESRESYDAPPTPSGARLIPDFPV
ARSSSPARKGAGKRPAAAAAAAGSASPRSWDEAEAQEEEEAGGDGDGDADADGEDDPGHWDADA
ADAAFGASGGGRPHSRALAAEEIRQMLEGKPLADKMRPDALQDYIGQSRAVGQETLLRSLLETN
EIPSLILWGPPGCGKTTLAHIIANNSKKHSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKT
ILFIDEIHRFNKSQQDTFLPHVECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVT
ILMRAINSLGIHVLDSSRPTDPLSHSSNSSSEPSVFIEDKAVDTLAYLSDGDARTGLNGLQLAV
LARLSSRKMFCKKSGQTYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKAMRGSDQ
NASLYWLARMLEGGEDPLYVARRLVRFASEDIARC

hide sequence

RefSeq Acc Id:	XP_040138127 ⟸ XM_040282193
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSSTOP00000015001 ⟸ ENSSTOT00000026623

Protein Domains

UBZ4-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000026347	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000026623.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.8.60	UniProtKB/TrEMBL
	1.20.272.10	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
	DNA polymerase III clamp loader subunits, C-terminal domain	UniProtKB/TrEMBL
InterPro	AAA+_ATPase	UniProtKB/TrEMBL
	AAA_assoc_2	UniProtKB/TrEMBL
	AAA_ATPase_RarA/MGS1/WRNIP1	UniProtKB/TrEMBL
	ATPase_AAA_core	UniProtKB/TrEMBL
	DNA_pol3_clamp-load_cplx_C	UniProtKB/TrEMBL
	MgsA_C	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	Rad18_UBZ4	UniProtKB/TrEMBL
	Znf-WRNIP1_ubi	UniProtKB/TrEMBL
NCBI Gene	Wrnip1	ENTREZGENE
PANTHER	ATPASE WRNIP1	UniProtKB/TrEMBL
	WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER	UniProtKB/TrEMBL
Pfam	AAA	UniProtKB/TrEMBL
	AAA_assoc_2	UniProtKB/TrEMBL
	MgsA_C	UniProtKB/TrEMBL
	zf-WRNIP1_ubi	UniProtKB/TrEMBL
PROSITE	ZF_UBZ4	UniProtKB/TrEMBL
SMART	AAA	UniProtKB/TrEMBL
	ZnF_Rad18	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48019	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	I3MSA6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-04-16	Wrnip1	WRN helicase interacting protein 1		Werner helicase interacting protein 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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