Symbol:
Znf652
Name:
zinc finger protein 652
RGD ID:
12627351
Description:
ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); RNA polymerase II cis-regulatory region sequence-specific DNA binding (inferred); zinc ion binding (inferred); INVOLVED IN positive regulation of transcription by RNA polymerase II (inferred); regulation of transcription by RNA polymerase II (inferred); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); trichodontoosseous syndrome (ortholog); FOUND IN nucleus (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405602 24,849,745 - 24,866,274 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936490 12,208,820 - 12,224,962 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936490 12,208,869 - 12,228,717 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Znf652 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405602 24,849,745 - 24,866,274 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936490 12,208,820 - 12,224,962 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936490 12,208,869 - 12,228,717 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
ZNF652 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 49,288,117 - 49,362,473 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 49,289,206 - 49,362,473 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 17 47,366,568 - 47,439,835 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 44,727,485 - 44,794,834 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 17 44,727,484 - 44,794,834 NCBI Celera 17 43,821,019 - 43,894,844 (-) NCBI Celera Cytogenetic Map 17 q21.32-q21.33 NCBI HuRef 17 42,731,966 - 42,805,178 (-) NCBI HuRef CHM1_1 17 47,431,795 - 47,504,982 (-) NCBI CHM1_1 T2T-CHM13v2.0 17 50,152,285 - 50,225,479 (-) NCBI T2T-CHM13v2.0
Zfp652 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 95,639,893 - 95,655,541 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 95,603,499 - 95,725,941 (+) Ensembl GRCm39 Ensembl GRCm38 11 95,749,067 - 95,764,715 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 95,712,673 - 95,835,115 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 95,610,381 - 95,626,029 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 95,565,090 - 95,588,442 (+) NCBI MGSCv36 mm8 Celera 11 105,391,289 - 105,406,937 (+) NCBI Celera Cytogenetic Map 11 D NCBI cM Map 11 59.01 NCBI
Zfp652 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 81,123,326 - 81,203,153 (+) NCBI GRCr8 mRatBN7.2 10 80,626,555 - 80,706,397 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 80,649,400 - 80,698,674 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 85,632,051 - 85,647,274 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 85,130,094 - 85,145,302 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 80,522,451 - 80,537,492 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 83,556,809 - 83,572,014 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 83,556,809 - 83,572,019 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 83,360,955 - 83,376,160 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 84,452,884 - 84,468,055 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 10 79,452,109 - 79,467,314 (+) NCBI Celera Cytogenetic Map 10 q26 NCBI
Znf652 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955451 12,183,495 - 12,209,981 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955451 12,183,801 - 12,213,976 (+) NCBI ChiLan1.0 ChiLan1.0
ZNF652 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 15,805,174 - 15,878,572 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 17,771,314 - 17,844,692 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 8,242,380 - 8,315,504 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 17 8,267,198 - 8,300,380 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 17 8,227,998 - 8,291,188 (+) Ensembl panpan1.1 panPan2
ZNF652 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 9 25,426,536 - 25,492,858 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 9 25,435,139 - 25,493,026 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 9 24,886,297 - 24,952,568 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 9 26,222,811 - 26,288,954 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 9 26,230,712 - 26,288,877 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 9 24,990,902 - 25,014,617 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 9 25,250,216 - 25,316,336 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 9 25,379,061 - 25,445,207 (-) NCBI UU_Cfam_GSD_1.0
ZNF652 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 12 25,492,537 - 25,553,715 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 12 25,484,518 - 25,553,939 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 12 25,426,800 - 25,495,203 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
ZNF652 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 16 69,697,284 - 69,762,024 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 16 69,698,958 - 69,718,186 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666077 40,795,157 - 40,867,327 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Znf652
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000011303 ⟹ ENSSTOP00000010141
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936490 12,208,820 - 12,224,962 (+) Ensembl
RefSeq Acc Id:
XM_005321695 ⟹ XP_005321752
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405602 24,849,745 - 24,866,274 (-) NCBI SpeTri2.0 NW_004936490 12,208,869 - 12,228,717 (+) NCBI
Sequence:
GATGCTCCAAGTTCCTTGCAGCTCTCTTCAGAAGAAAATCACCTGTGCTCTGCTCTTGCCATAATACCAAACCCTTTTTCTTATGTTTTGGTGCTGTGACACTGGAAGAATTGCACAGAGGTTCCAGT
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RefSeq Acc Id:
XP_005321752 ⟸ XM_005321695
- UniProtKB:
I3MH23 (UniProtKB/TrEMBL)
- Sequence:
MSHTASSCQELVENCAVHVAGMAQEESRRGQVPSTFYHGANQELDLSTKVYKRESGSPYSVLVDTKMSKPHLHETEEQPYFRETRAVSDVHAVKEDRENSDDSEEEEEEEEEVSYKREQIIVEVNLNN
hide sequence
Ensembl Acc Id:
ENSSTOP00000010141 ⟸ ENSSTOT00000011303
