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Gene: Cldn7 (claudin 7) Ictidomys tridecemlineatus

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Symbol:

Cldn7

Name:

claudin 7

RGD ID:

12605930

Description:

ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); common variable immunodeficiency (ortholog); congenital myasthenic syndrome 2A (ortholog); FOUND IN basolateral plasma membrane (ortholog); lateral plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

claudin-7

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CLDN7 (claudin 7)	NCBI	Ortholog
Mus musculus (house mouse):	Cldn7 (claudin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cldn7 (claudin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cldn7 (claudin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CLDN7 (claudin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CLDN7 (claudin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CLDN7 (claudin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CLDN7 (claudin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cldn7 (claudin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	47,076,171 - 47,078,026 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936595	550,568 - 552,632 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936595	550,359 - 552,214 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cldn7	Squirrel	COVID-19		ISO	RGD:68646	9068941	mRNA:increased expression:peripheral blood mononuclear cell (human)	RGD	PMID:32228226\|REF_RGD_ID:28912744
Cldn7	Squirrel	Neoplasm Metastasis		ISO	RGD:68432	9068941		RGD	PMID:23390083\|REF_RGD_ID:9685143

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cldn7	Squirrel	common variable immunodeficiency		ISO	RGD:68646	8554872	ClinVar Annotator: match by term: Common variable immunodeficiency	ClinVar	PMID:28492532
Cldn7	Squirrel	congenital myasthenic syndrome 2A		ISO	RGD:68646	8554872	ClinVar Annotator: match by term: Congenital myasthenic syndrome 2A	ClinVar	PMID:28492532
Cldn7	Squirrel	dyskeratosis congenita		ISO	RGD:68646	8554872	ClinVar Annotator: match by term: Dyskeratosis congenita	ClinVar	PMID:28492532
Cldn7	Squirrel	Faundes-Banka Syndrome		ISO	RGD:68646	8554872	ClinVar Annotator: match by term: Faundes-Banka syndrome	ClinVar	PMID:31690835
Cldn7	Squirrel	intellectual disability		ISO	RGD:68646	8554872	ClinVar Annotator: match by term: Intellectual disability, mild	ClinVar
Cldn7	Squirrel	Li-Fraumeni syndrome		ISO	RGD:68646	8554872	ClinVar Annotator: match by term: Li-Fraumeni syndrome	ClinVar	PMID:20522432\|PMID:21056402\|PMID:23172776\|PMID:26681312\|PMID:28492532
Cldn7	Squirrel	very long chain acyl-CoA dehydrogenase deficiency		ISO	RGD:68646	8554872	ClinVar Annotator: match by term: Very long chain acyl-CoA dehydrogenase deficiency	ClinVar	PMID:11590124\|PMID:28492532\|PMID:9973285
Cldn7	Squirrel	Weissenbacher-Zweymuller syndrome		ISO	RGD:68646	8554872	ClinVar Annotator: match by term: Glossoptosis, micrognathia, and cleft palate	ClinVar

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cldn7	Squirrel	allergic rhinitis		ISO	RGD:68646	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:33441633
Cldn7	Squirrel	ovarian carcinoma		ISO	RGD:68646	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21134740
Cldn7	Squirrel	Prostatic Neoplasms		ISO	RGD:68646	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:17013881

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cldn7	Squirrel	negative regulation of apoptotic process		ISO	RGD:68432	9068941		RGD	PMID:19276185\|REF_RGD_ID:9685062
Cldn7	Squirrel	negative regulation of cell adhesion		ISO	RGD:68432	9068941		RGD	PMID:19276185\|REF_RGD_ID:9685062
Cldn7	Squirrel	negative regulation of protein-containing complex assembly		ISO	RGD:68432	9068941	Epcam homooligomers	RGD	PMID:19276185\|REF_RGD_ID:9685062
Cldn7	Squirrel	positive regulation of cell motility		ISO	RGD:68432	9068941		RGD	PMID:19276185\|REF_RGD_ID:9685062
Cldn7	Squirrel	positive regulation of cell population proliferation		ISO	RGD:68432	9068941		RGD	PMID:19276185\|REF_RGD_ID:9685062
Cldn7	Squirrel	response to ethanol		ISO	RGD:68432	9068941		RGD	PMID:17889313\|REF_RGD_ID:11344881

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cldn7	Squirrel	anchoring junction	located_in	IEA	UniProtKB-KW:KW-0965	150520179		UniProt	GO_REF:0000043
Cldn7	Squirrel	apicolateral plasma membrane	located_in	IEA	UniProtKB:Q9Z261\|ensembl:ENSMUSP00000018713	150520179		Ensembl	GO_REF:0000107
Cldn7	Squirrel	basolateral plasma membrane		ISO	RGD:68432	9068941		RGD	PMID:23180307\|REF_RGD_ID:9685072
Cldn7	Squirrel	basolateral plasma membrane	located_in	IEA	UniProtKB:Q9Z261\|ensembl:ENSMUSP00000018713	150520179		Ensembl	GO_REF:0000107
Cldn7	Squirrel	bicellular tight junction	located_in	IEA	UniProtKB-SubCell:SL-0265	150520179		UniProt	GO_REF:0000044
Cldn7	Squirrel	bicellular tight junction	located_in	IEA	UniProtKB-KW:KW-0796	150520179		UniProt	GO_REF:0000043
Cldn7	Squirrel	bicellular tight junction	located_in	IEA	InterPro:IPR003552\|InterPro:IPR006187	150520179		InterPro	GO_REF:0000002
Cldn7	Squirrel	bicellular tight junction	located_in	IEA	UniProtKB:Q9Z261\|ensembl:ENSMUSP00000018713	150520179		Ensembl	GO_REF:0000107
Cldn7	Squirrel	bicellular tight junction	located_in	IEA	UniRule:UR000060637	150520179		UniProt	GO_REF:0000104
Cldn7	Squirrel	lateral plasma membrane		ISO	RGD:68432	9068941		RGD	PMID:17853415\|REF_RGD_ID:9685071
Cldn7	Squirrel	lateral plasma membrane	located_in	IEA	UniProtKB:Q9Z261\|ensembl:ENSMUSP00000018713	150520179		Ensembl	GO_REF:0000107
Cldn7	Squirrel	membrane	located_in	IEA	InterPro:IPR004031	150520179		InterPro	GO_REF:0000002
Cldn7	Squirrel	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
Cldn7	Squirrel	membrane	located_in	IEA	UniRule:UR000060637	150520179		UniProt	GO_REF:0000104
Cldn7	Squirrel	plasma membrane	located_in	IEA	UniProtKB-KW:KW-1003	150520179		UniProt	GO_REF:0000043
Cldn7	Squirrel	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	150520179		UniProt	GO_REF:0000044
Cldn7	Squirrel	plasma membrane	located_in	IEA	UniProtKB:O95471\|UniProtKB:Q9Z261\|ensembl:ENSMUSP00000018713\|ensembl:ENSP00000353475	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cldn7	Squirrel	cell adhesion molecule binding		ISO	RGD:621365	9068941		RGD	PMID:19276185\|REF_RGD_ID:9685062
Cldn7	Squirrel	protein binding	enables	ISO	UniProtKB:P16422	9068941	PMID:16054130	UniProt	PMID:16054130
Cldn7	Squirrel	protein binding	enables	ISO	UniProtKB:P39447\|UniProtKB:Q9QXY1\|UniProtKB:Q9Z0U1	9068941	PMID:10601346	UniProt	PMID:10601346
Cldn7	Squirrel	protein binding	enables	ISO	UniProtKB:A2A2V5\|UniProtKB:A5PKU2\|UniProtKB:O00526\|UniProtKB:O14569\|UniProtKB:O15155\|UniProtKB:O43169\|UniProtKB:O43561-2\|UniProtKB:O43736\|UniProtKB:O60883\|UniProtKB:O75396\|UniProtKB:O75841\|UniProtKB:O95183\|UniProtKB:O95214\|UniProtKB:O95393\|UniProtKB:O95406\|UniProtKB:P01375\|UniProtKB:P05090\|UniProtKB:P07306\|UniProtKB:P17152\|UniProtKB:P19397\|UniProtKB:P21145\|UniProtKB:P21854\|UniProtKB:P24593\|UniProtKB:P26678\|UniProtKB:P29400-2\|UniProtKB:P54852\|UniProtKB:P56851\|UniProtKB:Q07325\|UniProtKB:Q0D2K0\|UniProtKB:Q13021\|UniProtKB:Q14162\|UniProtKB:Q15836\|UniProtKB:Q16617\|UniProtKB:Q2T9K0-2\|UniProtKB:Q5BJF2\|UniProtKB:Q5BJH2-2\|UniProtKB:Q5BVD1\|UniProtKB:Q5J8X5\|UniProtKB:Q5QGT7\|UniProtKB:Q6N075\|UniProtKB:Q6UX06\|UniProtKB:Q6UX27-3\|UniProtKB:Q7Z2K6\|UniProtKB:Q86UF1\|UniProtKB:Q86W74-2\|UniProtKB:Q8N112\|UniProtKB:Q8N5M9\|UniProtKB:Q8NBI2\|UniProtKB:Q92843\|UniProtKB:Q969E2\|UniProtKB:Q96DZ9-2\|UniProtKB:Q96F15\|UniProtKB:Q96IV6\|UniProtKB:Q9BQA9\|UniProtKB:Q9BVK8\|UniProtKB:Q9H0Q3\|UniProtKB:Q9H1C4\|UniProtKB:Q9H2L4\|UniProtKB:Q9NS64\|UniProtKB:Q9NV12\|UniProtKB:Q9NV29\|UniProtKB:Q9NVC3\|UniProtKB:Q9NVV5-2\|UniProtKB:Q9NWW5\|UniProtKB:Q9NX14\|UniProtKB:Q9UBY5\|UniProtKB:Q9UHJ9-5\|UniProtKB:Q9UKR5\|UniProtKB:Q9Y5Z9	9068941	PMID:32296183	IntAct	PMID:32296183
Cldn7	Squirrel	protein binding	enables	ISO	UniProtKB:Q8N205	9068941	PMID:25416956	IntAct	PMID:25416956
Cldn7	Squirrel	protein domain specific binding		ISO	RGD:621365	9068941		RGD	PMID:19276185\|REF_RGD_ID:9685062
Cldn7	Squirrel	structural molecule activity	enables	IEA	InterPro:IPR003552\|InterPro:IPR006187	150520179		InterPro	GO_REF:0000002

PMID:22301074	PMID:30032202

Cldn7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	47,076,171 - 47,078,026 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936595	550,568 - 552,632 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936595	550,359 - 552,214 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CLDN7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	7,259,903 - 7,263,213 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	7,259,903 - 7,263,983 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	7,163,222 - 7,166,532 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	7,103,946 - 7,106,519 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	7,104,183 - 7,106,513	NCBI
Celera	17	7,187,867 - 7,191,157 (-)	NCBI		Celera
Cytogenetic Map	17	p13.1	NCBI
HuRef	17	7,054,628 - 7,057,918 (-)	NCBI		HuRef
CHM1_1	17	7,172,020 - 7,175,309 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	7,160,826 - 7,164,136 (-)	NCBI		T2T-CHM13v2.0

Cldn7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	69,855,605 - 69,858,712 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	69,855,605 - 69,858,711 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	69,964,779 - 69,967,886 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	69,964,779 - 69,967,885 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	69,779,003 - 69,781,380 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	69,781,696 - 69,784,073 (+)	NCBI		MGSCv36	mm8
Celera	11	77,513,435 - 77,515,812 (+)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI
cM Map	11	42.94	NCBI

Cldn7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	55,188,670 - 55,190,871 (+)	NCBI		GRCr8
mRatBN7.2	10	54,689,684 - 54,692,177 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	54,689,987 - 54,692,171 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	59,352,132 - 59,354,371 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	58,840,710 - 58,842,949 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	54,347,988 - 54,350,227 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	56,576,326 - 56,578,632 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	56,576,428 - 56,578,626 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	56,321,522 - 56,323,751 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	56,810,947 - 56,813,134 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	56,825,014 - 56,826,754 (+)	NCBI
Celera	10	53,843,619 - 53,845,806 (+)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Cldn7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	9,652,093 - 9,654,291 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955467	9,652,093 - 9,654,291 (+)	NCBI	ChiLan1.0	ChiLan1.0

CLDN7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	14,852,538 - 14,855,530 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	16,818,544 - 16,821,522 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	7,289,766 - 7,292,433 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	7,277,313 - 7,281,859 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	7,277,313 - 7,281,859 (-)	Ensembl	panpan1.1		panPan2

CLDN7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	32,223,985 - 32,225,795 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	32,224,040 - 32,226,168 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	32,362,233 - 32,364,044 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	32,329,561 - 32,331,372 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	32,329,616 - 32,331,372 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	32,294,842 - 32,296,653 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	32,253,867 - 32,255,678 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	32,430,822 - 32,432,633 (-)	NCBI		UU_Cfam_GSD_1.0

CLDN7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	52,612,510 - 52,628,362 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	52,612,517 - 52,628,376 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	54,822,459 - 54,828,675 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CLDN7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	6,632,695 - 6,635,994 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	6,630,412 - 6,635,327 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	14,774,139 - 14,777,617 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cldn7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	9,873,555 - 9,875,817 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624786	9,873,555 - 9,875,743 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005332772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000001194 ⟹ ENSSTOP00000001068

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936595	550,568 - 552,632 (-)	Ensembl

RefSeq Acc Id:

XM_005332772 ⟹ XP_005332829

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	47,076,171 - 47,078,026 (-)	NCBI
SpeTri2.0	NW_004936595	550,359 - 552,214 (-)	NCBI

Sequence:

show sequence

ATGGCCAATTCAGGCCTGCAGTTGTTGGGCTTTTCCATGGCAATGCTGGGTTGGGTGGGCCTGGTGGCAAGCACCGCCATCCCGCAATGGCAGATGAGTTCGTACGCAGGCGACAACATTATCACGGC
CCAGGCCATGTACAAGGGGCTGTGGATGGACTGCGTTACGCAAAGCACCGGCATGATGAGCTGCAAAATGTACGACTCGGTGCTTGCTCTGCCGGCGGCCATGCAGGCCACTCGAGCCCTAATGGTGT
TATCCTTGGTGCTGGGCTTCCTCGCTATGTTTGTGGCCACGATGGGTATGAAGTGCACACGCTGTGGGGGAGACGATAAAGTAAAAAAGGCCCGTATAGCTATGACTGGAGGCATCATTTTCATCGTA
GCAGGTCTTGCAGCCTTGGTAGCATGCTCCTGGTATGGTCATCAGATTGTCACAGACTTTTATAACCCCACCGTCCCTGTGAATTTTAAGTATGAGTTTGGTTCTGCCATCTTTATTGGCTGGGCAGG
GTCTGCTCTGGTCCTCCTAGGAGGTGCACTGCTCTCTTGCTCCTGTCCTGGACAGGAGAGCAAAGCTGTGTACCGTGCACCACGCTCCTACCCTAAGTCCAACTCTGCCAAGGAATATGTGTGAGGTG
GGACTCCCATGCCCCAGCCTGACAAACTGTGGGCGTGCCCAAGTGACTCAAAGGACCCAGGGCAGAGGATTCAGCATGTGGGCAGAGTGCAGGACAAAGGCCTCCTGGTCACTCCATCCTTGTACACC
ATGTACAGTCCTCTGGGGGGGGGGGTTGGGTAGGAGACAAAAAGTGGGGAGAATGTGCTTTTTGTACAGTAATAAAAAATACGTTTTGGA

hide sequence


Protein RefSeqs	XP_005332829	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000001068.2
GenBank Protein	KAG3269840	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005332829 ⟸ XM_005332772

- UniProtKB:

I3LY52 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MANSGLQLLGFSMAMLGWVGLVASTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMSCKMYDSVLALPAAMQATRALMVLSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMTGGIIFIV
AGLAALVACSWYGHQIVTDFYNPTVPVNFKYEFGSAIFIGWAGSALVLLGGALLSCSCPGQESKAVYRAPRSYPKSNSAKEYV

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Ensembl Acc Id:

ENSSTOP00000001068 ⟸ ENSSTOT00000001194

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000001197	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000001194.3	UniProtKB/TrEMBL
Gene3D-CATH	1.20.140.150	UniProtKB/TrEMBL
InterPro	Claudin	UniProtKB/TrEMBL
	Claudin7	UniProtKB/TrEMBL
	Claudin_CS	UniProtKB/TrEMBL
	PMP22/EMP/MP20/Claudin	UniProtKB/TrEMBL
NCBI Gene	Cldn7	ENTREZGENE
PANTHER	PTHR12002	UniProtKB/TrEMBL
Pfam	PMP22_Claudin	UniProtKB/TrEMBL
PRINTS	CLAUDIN	UniProtKB/TrEMBL
	CLAUDIN7	UniProtKB/TrEMBL
PROSITE	CLAUDIN	UniProtKB/TrEMBL
UniProt	I3LY52	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD