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Gene: Prmt7 (protein arginine methyltransferase 7) Ictidomys tridecemlineatus

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Symbol:

Prmt7

Name:

protein arginine methyltransferase 7

RGD ID:

12575314

Description:

ENCODES a protein that exhibits histone binding (inferred); histone H4 methyltransferase activity (inferred); histone H4R3 methyltransferase activity (inferred); INVOLVED IN peptidyl-arginine methylation (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); autosomal dominant dyskeratosis congenita 6 (ortholog); brachydactyly (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); fibrillar center (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	40,921,588 - 40,967,897 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	18,632,052 - 18,672,247 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	18,632,022 - 18,667,515 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Prmt7	Squirrel	acanthosis nigricans		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Acanthosis nigricans	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	autosomal dominant dyskeratosis congenita 6		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Dyskeratosis congenita and autosomal dominant 6	ClinVar	PMID:28492532
Prmt7	Squirrel	brachydactyly		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Brachydactyly	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	Chromosome 16q12 Duplication Syndrome		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chromosome 16q12 duplication syndrome	ClinVar	PMID:25741868
Prmt7	Squirrel	Dwarfism		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Short stature	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	familial hyperlipidemia		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hyperlipidemia	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	generalized epilepsy		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Epileptic encephalopathy	ClinVar	PMID:25741868
Prmt7	Squirrel	genetic disease		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	Insulin Resistance		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Insulin resistance	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	intellectual disability		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 and PMID:28492532
Prmt7	Squirrel	intellectual disability		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability and severe	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	Myoclonic Epilepsies		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Generalized myoclonic seizures	ClinVar	PMID:25741868 and PMID:33085104
Prmt7	Squirrel	Neurodevelopmental Disorders		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16199547 more ...
Prmt7	Squirrel	obesity		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Obesity disorder	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	osteochondrodysplasia		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Skeletal dysplasia	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	Progressive Myoclonus Epilepsy 12		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Epilepsy more ...	ClinVar	PMID:25741868 and PMID:33085104
Prmt7	Squirrel	renal hypoplasia		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Renal hypoplasia	ClinVar	PMID:25741868 more ...
Prmt7	Squirrel	Short Stature, Brachydactyly, Intellectual Developmental Disability, and Seizures		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16199547 more ...
Prmt7	Squirrel	steatotic liver disease		ISO	PRMT7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hepatic steatosis	ClinVar	PMID:25741868 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Prmt7	Squirrel	Short Stature, Brachydactyly, Intellectual Developmental Disability, and Seizures		ISO	PRMT7 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Prmt7	Squirrel	cell differentiation	involved_in	IEA	UniProtKB-KW:KW-0221	150520179		UniProt	GO_REF:0000043
Prmt7	Squirrel	chromatin organization	involved_in	IEA	UniProtKB-KW:KW-0156	150520179		UniProt	GO_REF:0000043
Prmt7	Squirrel	chromatin remodeling	involved_in	IEA	PANTHER:PTN000109694 and PANTHER:PTN000109734	150520179		TreeGrafter	GO_REF:0000118
Prmt7	Squirrel	genomic imprinting	involved_in	IEA	UniProtKB:Q922X9 and ensembl:ENSMUSP00000071521	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	methylation	involved_in	IEA	UniProtKB-KW:KW-0489	150520179		UniProt	GO_REF:0000043
Prmt7	Squirrel	peptidyl-arginine methylation	involved_in	ISO	PRMT7 (Homo sapiens)	9068941	PMID:17709427	UniProt	PMID:17709427
Prmt7	Squirrel	spliceosomal snRNP assembly	involved_in	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	spliceosomal snRNP assembly	involved_in	IEA	UniRule:UR000615760	150520179		UniProt	GO_REF:0000104

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Prmt7	Squirrel	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
Prmt7	Squirrel	cytosol	located_in	IEA	UniProtKB-SubCell:SL-0091	150520179		UniProt	GO_REF:0000044
Prmt7	Squirrel	cytosol	located_in	IEA	UniRule:UR000615760	150520179		UniProt	GO_REF:0000104
Prmt7	Squirrel	cytosol	located_in	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	fibrillar center	located_in	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	nucleoplasm	located_in	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	nucleus	located_in	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	nucleus	located_in	IEA	UniRule:UR000615760	150520179		UniProt	GO_REF:0000104
Prmt7	Squirrel	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043
Prmt7	Squirrel	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Prmt7	Squirrel	histone binding	enables	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	histone H4 methyltransferase activity	enables	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	histone H4R3 methyltransferase activity	enables	IEA	UniRule:UR000615760	150520179		UniProt	GO_REF:0000104
Prmt7	Squirrel	histone H4R3 methyltransferase activity	enables	IEA	UniProtKB:Q922X9 and ensembl:ENSMUSP00000071521	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	histone methyltransferase activity	enables	IEA	PANTHER:PTN000109694 and PANTHER:PTN000109734	150520179		TreeGrafter	GO_REF:0000118
Prmt7	Squirrel	methyltransferase activity	enables	IEA	UniProtKB-KW:KW-0489	150520179		UniProt	GO_REF:0000043
Prmt7	Squirrel	methyltransferase activity	enables	IEA	InterPro:IPR014644	150520179		InterPro	GO_REF:0000002
Prmt7	Squirrel	protein binding	enables	ISO	UniProtKB:P00966	9068941	PMID:28587924	IntAct	PMID:28587924
Prmt7	Squirrel	protein binding	enables	ISO	UniProtKB:A2APF3	9068941	PMID:17048991	UniProt	PMID:17048991
Prmt7	Squirrel	protein binding	enables	ISO	UniProtKB:P05198 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
Prmt7	Squirrel	protein binding	enables	ISO	UniProtKB:P05198	9068941	PMID:33961781	IntAct	PMID:33961781
Prmt7	Squirrel	protein-arginine N-methyltransferase activity	enables	IEA	InterPro:IPR025799	150520179		InterPro	GO_REF:0000002
Prmt7	Squirrel	protein-arginine N-methyltransferase activity	enables	IEA	PANTHER:PTN000109694 and PANTHER:PTN000109734	150520179		TreeGrafter	GO_REF:0000118
Prmt7	Squirrel	protein-arginine omega-N monomethyltransferase activity	enables	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	protein-arginine omega-N monomethyltransferase activity	enables	IEA	EC:2.1.1.321	150520179		UniProt	GO_REF:0000003
Prmt7	Squirrel	protein-arginine omega-N monomethyltransferase activity	enables	IEA	RHEA:48100	150520179		RHEA	GO_REF:0000116
Prmt7	Squirrel	protein-arginine omega-N symmetric methyltransferase activity	enables	IEA	UniProtKB:Q922X9 more ...	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	ribonucleoprotein complex binding	enables	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	S-adenosylmethionine-dependent methyltransferase activity	enables	IEA	UniProtKB:Q9NVM4 and ensembl:ENSP00000409324	150520179		Ensembl	GO_REF:0000107
Prmt7	Squirrel	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	150520179		UniProt	GO_REF:0000043

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Prmt7	Squirrel	histone modification pathway		ISO	PRMT7 (Homo sapiens)	9068941		RGD	PMID:24583552 and REF_RGD_ID:9479047
Prmt7	Squirrel	methionine cycle/metabolic pathway		ISO	PRMT7 (Homo sapiens)	9068941		RGD	PMID:21074527 and REF_RGD_ID:7242552

PMID:22301074	PMID:30032202

Prmt7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	40,921,588 - 40,967,897 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	18,632,052 - 18,672,247 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	18,632,022 - 18,667,515 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PRMT7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	68,311,019 - 68,360,870 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	68,310,951 - 68,360,852 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	68,344,922 - 68,392,487 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	66,902,446 - 66,948,663 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	16	52,853,382 - 52,899,696 (+)	NCBI		Celera
Cytogenetic Map	16	q22.1	NCBI
HuRef	16	54,218,054 - 54,264,367 (+)	NCBI		HuRef
CHM1_1	16	69,752,898 - 69,799,208 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	74,106,797 - 74,156,712 (+)	NCBI		T2T-CHM13v2.0

Prmt7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	106,937,686 - 106,978,326 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	106,937,568 - 106,979,426 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	106,211,054 - 106,251,694 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	106,210,936 - 106,252,794 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	108,734,954 - 108,775,594 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	109,100,183 - 109,140,823 (+)	NCBI		MGSCv36	mm8
Celera	8	110,438,956 - 110,479,594 (+)	NCBI		Celera
Cytogenetic Map	8	D3	NCBI
cM Map	8	53.11	NCBI

Prmt7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	51,020,596 - 51,071,401 (+)	NCBI		GRCr8
mRatBN7.2	19	34,110,724 - 34,161,531 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	34,110,747 - 34,162,577 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	40,926,293 - 40,977,095 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	41,579,606 - 41,630,406 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	43,878,750 - 43,929,555 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	38,189,605 - 38,237,155 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	38,189,605 - 38,237,308 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	49,056,853 - 49,106,848 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	36,059,837 - 36,111,356 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	19	33,537,809 - 33,588,606 (+)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

Prmt7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955484	8,299,427 - 8,340,287 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955484	8,299,427 - 8,352,465 (-)	NCBI	ChiLan1.0	ChiLan1.0

PRMT7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	77,857,666 - 77,907,562 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	83,769,000 - 83,816,603 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	48,687,324 - 48,734,883 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	68,081,700 - 68,131,907 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	68,086,620 - 68,127,953 (+)	Ensembl	panpan1.1		panPan2

PRMT7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	81,172,085 - 81,216,708 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	81,173,147 - 81,216,669 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	81,163,601 - 81,207,468 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	81,608,170 - 81,652,304 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	81,607,111 - 81,651,584 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	81,434,966 - 81,479,057 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	81,117,903 - 81,161,718 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	81,758,874 - 81,802,993 (-)	NCBI		UU_Cfam_GSD_1.0

PRMT7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	28,883,646 - 28,945,905 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	28,883,148 - 28,945,904 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	26,106,538 - 26,116,937 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PRMT7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	59,058,827 - 59,106,177 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	59,058,846 - 59,106,106 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	21,793,153 - 21,841,919 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Prmt7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	17,948,085 - 18,001,259 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	17,949,443 - 18,017,344 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005318350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021721680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021721681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280073	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040280074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010004409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000013717 ⟹ ENSSTOP00000012293

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936475	18,632,052 - 18,672,247 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000037482 ⟹ ENSSTOP00000029553

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936475	18,634,339 - 18,650,208 (+)	Ensembl

RefSeq Acc Id:

XM_005318350 ⟹ XP_005318407

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	40,921,634 - 40,957,125 (-)	NCBI
SpeTri2.0	NW_004936475	18,632,052 - 18,667,480 (+)	NCBI

Sequence:

show sequence

CGCCCCGCACGCTGACCACGGCAAGATGGCGGTAGCGGCGGCGGCGGTAGTAAGCCGAGTGATTCCTGCGCCGGATTTCTGACCATCAGATCTGTTCTTAAGAAGCAAACTGGCAAGGCTGCTTTTCT
ATCCAGACACTGGGGAGCTTGTGGCACCATGAAGGTCTTCTGTGGGCGAGCCAATCCCACTACAGGATCTGTTGAGTGGCTGGAAGAGGATGAACACTATGACTACCACCAGGAAATTGCCAGGTCAT
CCTATGCAGATATGCTACATGACAAAGACAGAAATATAAAATATTACCAGGGTATCCGGGCTGCTGTGAGCAGGGTAAAGAACAGAGGACAGAAAGCTATAGTTCTCGACATTGGTACTGGCACAGGA
CTCTTGTCAATGATGGCTGTCACAGCAGGTGCTGACTTCTGCTATGCTATTGAGGTTTTCAAGCCTATGGCTGATGCTGCTGTGAAAATTGTGAAGAAAAATGGCTTCAGTGATAAAATTAAGGTTAT
CAACAAGCATTCCACTGAGGTGACTGTAGGGCCAGATGGTGACATGCCATGCCGAGCCAATATCCTGGTCACAGAGCTGTTTGACACAGAACTGATTGGAGAGGGAGCACTACCCTCCTATGAGCATG
CACATAGGCATCTTGTACAGGAAAATTGTGAAGCTGTGCCCCACAGAGCAACTGTGTATGCGCAGCTGGTAGAGTCCAGAAGGATGTGGTCCTGGAACAAGCTGTTTCCTGTCCGTGTTCAGACCAGT
CTTGGAGAGCAGGTCATCATTCCTCCCTCAGAACTGGAGAGATGCCCTGGTGCACCTTCTGTCTATGACATACAGCTGAACCAGGTGTCACCTACTGACTTCACTGTCCTCAGCGATGTGCTGCCTAT
GTTCAGTGTGGACTTCAGCAAACAAGTCAGTAGTTCAGCAGCCTTCTATAGCAGGCAGTTTGAACCTCTGGCATCTGGCCAAGCTCAAGTGGTTCTCTCCTGGTGGGACATTGAAATGGACCCTGAAG
GGAAGATCAAGTGCACAATGGCCCCCTTTTGGGCTCATTCAGACCCAAAGGGGCTCCAGTGGCGGGATCATTGGATGCAGTGTGTGTACTTCCTGCCACAAGAGGAACCTATTGTACAGGGCACAACC
CACTGCCTGGTAGCCCACCATGATGACTACTGTGTATGGTACAGCCTTCAGAAGACCAGCCCTGAAGAAAATGGGAGAGTCCACCAATTGCGCCCTGTCTGTGACTGCCAAGCTCACCTGCTCTGGAA
TCGACCTCGATTTGGAGAGATCAATGATCAGGATAGAACTGATCAGTATGCCCAGGCATTGAGGACTGTGCTGACCCCAGACAGCGTTTGCCTGTGTGTCAGTGATGGCAGTCTGCTCTCCATGCTGG
CCTATTTCCTCGGGGCAGAGCAGGTATTTACAATTGAGAGTTCAGCAGCTTCCCATAAACTGATGAAAAAAATCTTCAAGGCTAACCACTTGGAAAATAAAATTAATATCATTGAGAAACGACCTGAG
TTACTAACGACTGCAGACTTGGAGGGTAAGAAGGTCTCCCTACTTCTGGGTGAGCCCTTCTTCACCACCAGCCTGCTGCCGTGGCACAACCTGTACTTCTGGTATGTCCGGACCGCTGTGGACCAGCA
CCTAAAGCCTGGTGCTGTGGTGATGCCCCAGGCTGCCTCACTGCACGCTATGGTCGTGGAGTTCAGGGACCTGTGGCGGATCCGGAGCCCCTGTGGTGACTGTGAAGGCTTTGATGTGCACATCATGG
ATGACATGATTAAGTCTGCCCTGGATTTCCGAGAGAGCAAAGAGGCAGAGCCCCACCCACTGTGGGAATACCCTTGCCGCAGCCTCTCAGAACCCCAGAGGCTCCTGACCTTTGATTTTCGGCAGCCG
GTTCCCCAGCAGCCTGTGTGTGCTGAGGGCTCCATGGAGCTGAGGAGGCCTGGGAGAAGTCATGGGATTGTCCTATGGATGGAATACCACCTGACACCAGACAGCACTGTTAGCACTGGCCTTCTGGA
GCCTGTCGAAGACAAGGGGAACTGTTGCTGGAACCCCCACTGCAAGCAGGCCGTGTACTTTCTCAGCCCCACACTGGATCCTAGAGTGCCGCTGCTGGGCAGCCCTCGGGCAGTCACCTATACTGTGG
AGTTTCACCCCAACACCGGAGATATCACCATGGAGTTCAAACTTACAGACATACCAGATTGA

hide sequence

RefSeq Acc Id:

XM_021721680 ⟹ XP_021577355

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	40,921,588 - 40,954,857 (-)	NCBI
SpeTri2.0	NW_004936475	18,632,022 - 18,667,515 (+)	NCBI

Sequence:

show sequence

AGGTCCCGCCCCGTGGACGCCCGAAGGCCCCGCCCCGCACGCTGACCACGGCAAGATGGCGGTA
GCGGCGGCGGCGGTAGTAAGCCGAGTGATTCCTGCGCCGGGTGAGAAGCTGGGCGTGCTGGGAAGATTTCTGACCATCAGATCTGTTCTTAAGAAGCAAACTGGCAAGGCTGCTTTTCTATCCAGACA
CTGGGGAGCTTGTGGCACCATGAAGGTCTTCTGTGGGCGAGCCAATCCCACTACAGGATCTGTTGAGTGGCTGGAAGAGGATGAACACTATGACTACCACCAGGAAATTGCCAGGTCATCCTATGCAG
ATATGCTACATGACAAAGACAGAAATATAAAATATTACCAGGGTATCCGGGCTGCTGTGAGCAGGGTAAAGAACAGAGGACAGAAAGCTATAGTTCTCGACATTGGTACTGGCACAGGACTCTTGTCA
ATGATGGCTGTCACAGCAGGTGCTGACTTCTGCTATGCTATTGAGGTTTTCAAGCCTATGGCTGATGCTGCTGTGAAAATTGTGAAGAAAAATGGCTTCAGTGATAAAATTAAGGTTATCAACAAGCA
TTCCACTGAGGTGACTGTAGGGCCAGATGGTGACATGCCATGCCGAGCCAATATCCTGGTCACAGAGCTGTTTGACACAGAACTGATTGGAGAGGGAGCACTACCCTCCTATGAGCATGCACATAGGC
ATCTTGTACAGGAAAATTGTGAAGCTGTGCCCCACAGAGCAACTGTGTATGCGCAGCTGGTAGAGTCCAGAAGGATGTGGTCCTGGAACAAGCTGTTTCCTGTCCGTGTTCAGACCAGTCTTGGAGAG
CAGGTCATCATTCCTCCCTCAGAACTGGAGAGATGCCCTGGTGCACCTTCTGTCTATGACATACAGCTGAACCAGGTGTCACCTACTGACTTCACTGTCCTCAGCGATGTGCTGCCTATGTTCAGTGT
GGACTTCAGCAAACAAGTCAGTAGTTCAGCAGCCTTCTATAGCAGGCAGTTTGAACCTCTGGCATCTGGCCAAGCTCAAGTGGTTCTCTCCTGGTGGGACATTGAAATGGACCCTGAAGGGAAGATCA
AGTGCACAATGGCCCCCTTTTGGGCTCATTCAGACCCAAAGGGGCTCCAGTGGCGGGATCATTGGATGCAGTGTGTGTACTTCCTGCCACAAGAGGAACCTATTGTACAGGGCACAACCCACTGCCTG
GTAGCCCACCATGATGACTACTGTGTATGGTACAGCCTTCAGAAGACCAGCCCTGAAGAAAATGGGAGAGTCCACCAATTGCGCCCTGTCTGTGACTGCCAAGCTCACCTGCTCTGGAATCGACCTCG
ATTTGGAGAGATCAATGATCAGGATAGAACTGATCAGTATGCCCAGGCATTGAGGACTGTGCTGACCCCAGACAGCGTTTGCCTGTGTGTCAGTGATGGCAGTCTGCTCTCCATGCTGGCCTATTTCC
TCGGGGCAGAGCAGGTATTTACAATTGAGAGTTCAGCAGCTTCCCATAAACTGATGAAAAAAATCTTCAAGGCTAACCACTTGGAAAATAAAATTAATATCATTGAGAAACGACCTGAGTTACTAACG
ACTGCAGACTTGGAGGGTAAGAAGGTCTCCCTACTTCTGGGTGAGCCCTTCTTCACCACCAGCCTGCTGCCGTGGCACAACCTGTACTTCTGGTATGTCCGGACCGCTGTGGACCAGCACCTAAAGCC
TGGTGCTGTGGTGATGCCCCAGGCTGCCTCACTGCACGCTATGGTCGTGGAGTTCAGGGACCTGTGGCGGATCCGGAGCCCCTGTGGTGACTGTGAAGGCTTTGATGTGCACATCATGGATGACATGA
TTAAGTCTGCCCTGGATTTCCGAGAGAGCAAAGAGGCAGAGCCCCACCCACTGTGGGAATACCCTTGCCGCAGCCTCTCAGAACCCCAGAGGCTCCTGACCTTTGATTTTCGGCAGCCGGTTCCCCAG
CAGCCTGTGTGTGCTGAGGGCTCCATGGAGCTGAGGAGGCCTGGGAGAAGTCATGGGATTGTCCTATGGATGGAATACCACCTGACACCAGACAGCACTGTTAGCACTGGCCTTCTGGAGCCTGTCGA
AGACAAGGGGAACTGTTGCTGGAACCCCCACTGCAAGCAGGCCGTGTACTTTCTCAGCCCCACACTGGATCCTAGAGTGCCGCTGCTGGGCAGCCCTCGGGCAGTCACCTATACTGTGGAGTTTCACC
CCAACACCGGAGATATCACCATGGAGTTCAAACTTACAGACATACCAGATTGACCCCTACTCGTTGAAATAAAGTGGTCTTAAGGCTG

hide sequence

RefSeq Acc Id:

XM_040280068 ⟹ XP_040136002

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	40,921,588 - 40,954,857 (-)	NCBI

RefSeq Acc Id:

XM_040280069 ⟹ XP_040136003

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	40,921,634 - 40,957,125 (-)	NCBI

RefSeq Acc Id:

XM_040280070 ⟹ XP_040136004

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	40,921,634 - 40,967,897 (-)	NCBI

RefSeq Acc Id:

XM_040280071 ⟹ XP_040136005

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	40,921,634 - 40,957,124 (-)	NCBI

RefSeq Acc Id:

XM_040280072 ⟹ XP_040136006

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	40,921,588 - 40,954,857 (-)	NCBI

RefSeq Acc Id:

XM_040280073 ⟹ XP_040136007

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	40,921,588 - 40,954,857 (-)	NCBI

RefSeq Acc Id:

XM_040280074 ⟹ XP_040136008

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	40,921,588 - 40,948,594 (-)	NCBI


Protein RefSeqs	XP_005318407	(Get FASTA)	NCBI Sequence Viewer
	XP_021577355	(Get FASTA)	NCBI Sequence Viewer
	XP_040136002	(Get FASTA)	NCBI Sequence Viewer
	XP_040136003	(Get FASTA)	NCBI Sequence Viewer
	XP_040136004	(Get FASTA)	NCBI Sequence Viewer
	XP_040136005	(Get FASTA)	NCBI Sequence Viewer
	XP_040136006	(Get FASTA)	NCBI Sequence Viewer
	XP_040136007	(Get FASTA)	NCBI Sequence Viewer
	XP_040136008	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000012293.3
	ENSSTOP00000029553.1
GenBank Protein	KAG3256978	(Get FASTA)	NCBI Sequence Viewer
	KAG3256979	(Get FASTA)	NCBI Sequence Viewer
	KAG3256980	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005318407 ⟸ XM_005318350
- Peptide Label:	isoform X1
- UniProtKB:	I3MLJ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKVFCGRANPTTGSVEWLEEDEHYDYHQEIARSSYADMLHDKDRNIKYYQGIRAAVSRVKNRGQKAIVLDIGTGTGLLSMMAVTAGADFCYAIEVFKPMADAAVKIVKKNGFSDKIKVINKHSTEVTV GPDGDMPCRANILVTELFDTELIGEGALPSYEHAHRHLVQENCEAVPHRATVYAQLVESRRMWSWNKLFPVRVQTSLGEQVIIPPSELERCPGAPSVYDIQLNQVSPTDFTVLSDVLPMFSVDFSKQV SSSAAFYSRQFEPLASGQAQVVLSWWDIEMDPEGKIKCTMAPFWAHSDPKGLQWRDHWMQCVYFLPQEEPIVQGTTHCLVAHHDDYCVWYSLQKTSPEENGRVHQLRPVCDCQAHLLWNRPRFGEIND QDRTDQYAQALRTVLTPDSVCLCVSDGSLLSMLAYFLGAEQVFTIESSAASHKLMKKIFKANHLENKINIIEKRPELLTTADLEGKKVSLLLGEPFFTTSLLPWHNLYFWYVRTAVDQHLKPGAVVMP QAASLHAMVVEFRDLWRIRSPCGDCEGFDVHIMDDMIKSALDFRESKEAEPHPLWEYPCRSLSEPQRLLTFDFRQPVPQQPVCAEGSMELRRPGRSHGIVLWMEYHLTPDSTVSTGLLEPVEDKGNCC WNPHCKQAVYFLSPTLDPRVPLLGSPRAVTYTVEFHPNTGDITMEFKLTDIPD hide sequence

RefSeq Acc Id:	XP_021577355 ⟸ XM_021721680
- Peptide Label:	isoform X1
- UniProtKB:	I3MLJ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAVAAAAVVSRVIPAPGEKLGVLGRFLTIRSVLKKQTGKAAFLSRHWGACGTMKVFCGRANPTT GSVEWLEEDEHYDYHQEIARSSYADMLHDKDRNIKYYQGIRAAVSRVKNRGQKAIVLDIGTGTGLLSMMAVTAGADFCYAIEVFKPMADAAVKIVKKNGFSDKIKVINKHSTEVTVGPDGDMPCRANI LVTELFDTELIGEGALPSYEHAHRHLVQENCEAVPHRATVYAQLVESRRMWSWNKLFPVRVQTSLGEQVIIPPSELERCPGAPSVYDIQLNQVSPTDFTVLSDVLPMFSVDFSKQVSSSAAFYSRQFE PLASGQAQVVLSWWDIEMDPEGKIKCTMAPFWAHSDPKGLQWRDHWMQCVYFLPQEEPIVQGTTHCLVAHHDDYCVWYSLQKTSPEENGRVHQLRPVCDCQAHLLWNRPRFGEINDQDRTDQYAQALR TVLTPDSVCLCVSDGSLLSMLAYFLGAEQVFTIESSAASHKLMKKIFKANHLENKINIIEKRPELLTTADLEGKKVSLLLGEPFFTTSLLPWHNLYFWYVRTAVDQHLKPGAVVMPQAASLHAMVVEF RDLWRIRSPCGDCEGFDVHIMDDMIKSALDFRESKEAEPHPLWEYPCRSLSEPQRLLTFDFRQPVPQQPVCAEGSMELRRPGRSHGIVLWMEYHLTPDSTVSTGLLEPVEDKGNCCWNPHCKQAVYFL SPTLDPRVPLLGSPRAVTYTVEFHPNTGDITMEFKLTDIPD hide sequence

RefSeq Acc Id:	XP_040136007 ⟸ XM_040280073
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_040136002 ⟸ XM_040280068
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_040136006 ⟸ XM_040280072
- Peptide Label:	isoform X3

Protein Domains

Protein arginine N-methyltransferase

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000013710	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000013717.3	UniProtKB/TrEMBL
	ENSSTOT00000037482.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.150	UniProtKB/TrEMBL
	Hnrnp arginine n-methyltransferase1	UniProtKB/TrEMBL
InterPro	Arg_MeTrfase	UniProtKB/TrEMBL
	MeTrfase_PRMT7	UniProtKB/TrEMBL
	PRMT_dom	UniProtKB/TrEMBL
	SAM-dependent_MTases	UniProtKB/TrEMBL
NCBI Gene	Prmt7	ENTREZGENE
PANTHER	PROTEIN ARGININE N-METHYLTRANSFERASE 7	UniProtKB/TrEMBL
	PTHR11006	UniProtKB/TrEMBL
Pfam	PrmA	UniProtKB/TrEMBL
	PRMT_C	UniProtKB/TrEMBL
PIRSF	Arg_N-mtase	UniProtKB/TrEMBL
PROSITE	SAM_MT_PRMT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53335	UniProtKB/TrEMBL
UniProt	A0A287D7P3_ICTTR	UniProtKB/TrEMBL
	I3MLJ8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations