Zfyve19 (zinc finger FYVE-type containing 19) - Rat Genome Database

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Gene: Zfyve19 (zinc finger FYVE-type containing 19) Ictidomys tridecemlineatus
Analyze
Symbol: Zfyve19
Name: zinc finger FYVE-type containing 19
RGD ID: 12572332
Description: ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (inferred); INVOLVED IN negative regulation of cytokinesis (ortholog); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN centrosome (inferred); cleavage furrow (inferred); midbody (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: abscission/NoCut checkpoint regulator
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864086,355,618 - 86,359,269 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049364714,203,391 - 4,207,332 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Zfyve19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864086,355,618 - 86,359,269 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049364714,203,391 - 4,207,332 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZFYVE19
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381540,807,089 - 40,815,084 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1540,807,086 - 40,815,084 (+)EnsemblGRCh38hg38GRCh38
GRCh371541,099,287 - 41,107,282 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361538,886,566 - 38,894,059 (+)NCBINCBI36Build 36hg18NCBI36
Build 341538,886,723 - 38,894,059NCBI
Celera1517,867,170 - 17,874,666 (+)NCBICelera
Cytogenetic Map15q15.1NCBI
HuRef1517,947,391 - 17,955,209 (+)NCBIHuRef
CHM1_11541,219,288 - 41,227,088 (+)NCBICHM1_1
T2T-CHM13v2.01538,613,113 - 38,621,110 (+)NCBIT2T-CHM13v2.0
Zfyve19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392119,039,088 - 119,047,531 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2119,039,098 - 119,047,530 (+)EnsemblGRCm39 Ensembl
GRCm382119,208,607 - 119,217,050 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2119,208,617 - 119,217,049 (+)EnsemblGRCm38mm10GRCm38
MGSCv372119,034,456 - 119,042,786 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362118,900,398 - 118,908,490 (+)NCBIMGSCv36mm8
Celera2120,358,842 - 120,367,201 (+)NCBICelera
Cytogenetic Map2E5NCBI
cM Map259.97NCBI
Zfyve19
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83126,649,625 - 126,657,812 (+)NCBIGRCr8
mRatBN7.23106,195,779 - 106,203,969 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3106,195,899 - 106,203,969 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3109,869,190 - 109,877,060 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03118,464,732 - 118,472,603 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03116,125,110 - 116,132,980 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03111,013,856 - 111,021,841 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3111,013,856 - 111,021,841 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03117,564,417 - 117,583,944 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43105,722,207 - 105,730,192 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3105,109,218 - 105,117,203 (+)NCBICelera
Cytogenetic Map3q35NCBI
Zfyve19
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554167,672,592 - 7,679,632 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554167,672,499 - 7,679,851 (+)NCBIChiLan1.0ChiLan1.0
ZFYVE19
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21630,048,198 - 30,055,226 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11534,199,702 - 34,206,663 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01519,747,606 - 19,755,185 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11537,999,283 - 38,006,744 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1537,999,283 - 38,006,744 (+)Ensemblpanpan1.1panPan2
ZFYVE19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1307,945,364 - 7,952,751 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl307,945,407 - 7,952,751 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha308,000,012 - 8,007,396 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0308,073,769 - 8,081,163 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl308,073,781 - 8,083,323 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1307,996,443 - 8,003,825 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0308,104,012 - 8,111,396 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0308,233,304 - 8,240,688 (+)NCBIUU_Cfam_GSD_1.0
ZFYVE19
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1130,510,719 - 130,517,216 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11130,510,718 - 130,517,943 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21145,668,920 - 145,675,472 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZFYVE19
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12642,186,708 - 42,194,750 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2642,184,668 - 42,193,473 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604898,787,370 - 98,794,452 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zfyve19
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248048,056,529 - 8,063,160 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248048,056,391 - 8,063,483 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_040274973   ⟹   XP_040130907
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864086,355,618 - 86,359,269 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040130907 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000000324.3
  ENSSTOP00000025987.1
GenBank Protein KAG3261629 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040130907   ⟸   XM_040274973
- UniProtKB: I3LWG9 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000000359 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000000361.3 UniProtKB/TrEMBL
  ENSSTOT00000034198.1 UniProtKB/TrEMBL
InterPro Bbox1_ANCHR UniProtKB/TrEMBL
NCBI Gene Zfyve19 ENTREZGENE
PANTHER ABSCISSION/NOCUT CHECKPOINT REGULATOR UniProtKB/TrEMBL
  ABSCISSION/NOCUT CHECKPOINT REGULATOR UniProtKB/TrEMBL
Superfamily-SCOP B-box zinc-binding domain UniProtKB/TrEMBL
UniProt A0A287CXF9_ICTTR UniProtKB/TrEMBL
  I3LWG9 ENTREZGENE, UniProtKB/TrEMBL