Advanced Search (OLGA)

Gene: Npy1r (neuropeptide Y receptor Y1) Ictidomys tridecemlineatus

Analyze

Symbol:

Npy1r

Name:

neuropeptide Y receptor Y1

RGD ID:

12553376

Description:

ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); neuropeptide binding (inferred); neuropeptide receptor activity (inferred); INVOLVED IN feeding behavior (ortholog); glucose metabolic process (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); alcohol withdrawal syndrome (ortholog); amphetamine abuse (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); neuronal dense core vesicle (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

neuropeptide Y receptor type 1; neuropeptide Y receptor Y1, transcript variant X1; neuropeptide Y receptor Y1, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	16,293,825 - 16,314,919 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936555	2,267,669 - 2,276,778 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936555	2,267,727 - 2,276,673 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

absence epilepsy (ISO)

alcohol withdrawal syndrome (ISO)

amphetamine abuse (ISO)

Anorexia (ISO)

anxiety disorder (ISO)

atherosclerosis (ISO)

Binge Drinking (ISO)

cocaine abuse (ISO)

Dehydration (ISO)

depressive disorder (ISO)

Experimental Diabetes Mellitus (ISO)

Experimental Seizures (ISO)

heroin dependence (ISO)

hypertension (ISO)

Myocardial Reperfusion Injury (ISO)

neural tube defect (ISO)

nicotine dependence (ISO)

obesity (ISO)

opiate dependence (ISO)

peripheral artery disease (ISO)

Stroke (ISO)

substance-induced psychosis (ISO)

temporal lobe epilepsy (ISO)

Toothache (ISO)

Wallerian Degeneration (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell communication (IEA)

feeding behavior (IEA,ISO)

G protein-coupled receptor signaling pathway (IEA)

glucose metabolic process (IEA,ISO)

locomotory behavior (IEA,ISO)

negative regulation of cytosolic calcium ion concentration (ISO)

negative regulation of hormone secretion (ISO)

neuropeptide signaling pathway (IEA)

outflow tract morphogenesis (IEA)

peristalsis (ISO)

positive regulation of cholesterol biosynthetic process (ISO)

positive regulation of vasoconstriction (ISO)

regulation of blood pressure (IEA,ISO)

regulation of multicellular organism growth (IEA,ISO)

regulation of presynaptic cytosolic calcium ion concentration (ISO)

regulation of synaptic vesicle exocytosis (ISO)

response to electrical stimulus (ISO)

response to estradiol (ISO)

response to ethanol (ISO)

response to morphine (ISO)

sensory perception of pain (IEA,ISO)

signaling (IEA)

synaptic signaling via neuropeptide (ISO)

Cellular Component

axon (ISO)

glutamatergic synapse (ISO)

membrane (IEA)

neuron projection (IEA)

neuronal dense core vesicle (ISO)

plasma membrane (IEA)

presynaptic membrane (ISO)

synaptic vesicle (ISO)

Molecular Function

G protein-coupled receptor activity (IEA)

neuropeptide binding (IEA)

neuropeptide receptor activity (IEA)

neuropeptide Y receptor activity (IEA)

pancreatic polypeptide receptor activity (IEA)

peptide YY receptor activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Npy1r
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	16,293,825 - 16,314,919 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936555	2,267,669 - 2,276,778 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936555	2,267,727 - 2,276,673 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NPY1R
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	163,323,962 - 163,344,689 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	163,323,962 - 163,344,832 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	164,245,114 - 164,253,748 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	164,464,567 - 164,473,198 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	164,602,721 - 164,611,353	NCBI
Celera	4	161,577,336 - 161,585,966 (-)	NCBI		Celera
Cytogenetic Map	4	q32.2	NCBI
HuRef	4	159,999,060 - 160,008,005 (-)	NCBI		HuRef
CHM1_1	4	164,221,563 - 164,230,393 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	166,671,793 - 166,692,717 (-)	NCBI		T2T-CHM13v2.0

Npy1r
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	67,149,595 - 67,159,452 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	67,149,844 - 67,159,444 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	66,697,149 - 66,706,800 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	66,697,192 - 66,706,792 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	69,221,321 - 69,230,697 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	69,632,837 - 69,635,097 (+)	NCBI		MGSCv36	mm8
Celera	8	69,251,576 - 69,260,940 (+)	NCBI		Celera
Cytogenetic Map	8	B3.1	NCBI
cM Map	8	33.15	NCBI

Npy1r
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	27,804,416 - 27,814,070 (-)	NCBI		GRCr8
mRatBN7.2	16	23,037,788 - 23,047,330 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	23,037,789 - 23,046,759 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	26,400,898 - 26,409,918 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	29,835,589 - 29,844,607 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	25,766,507 - 25,775,523 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	24,779,480 - 24,789,131 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	24,779,477 - 24,788,740 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	24,663,045 - 24,672,508 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	24,747,183 - 24,756,507 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	24,748,298 - 24,749,803 (-)	NCBI
Celera	16	23,162,089 - 23,171,059 (-)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

Npy1r
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	41,681,728 - 41,694,020 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	41,681,834 - 41,693,094 (+)	NCBI	ChiLan1.0	ChiLan1.0

NPY1R
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	161,132,638 - 161,153,546 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	161,495,180 - 161,516,073 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	155,583,870 - 155,604,336 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	167,372,306 - 167,392,716 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	167,372,310 - 167,381,597 (-)	Ensembl	panpan1.1		panPan2

NPY1R
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	59,580,546 - 59,587,753 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	59,580,809 - 59,583,237 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	59,946,494 - 59,947,746 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	60,338,999 - 60,348,168 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	60,339,001 - 60,348,197 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	59,574,468 - 59,575,720 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	59,665,153 - 59,666,405 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	60,034,141 - 60,035,393 (-)	NCBI		UU_Cfam_GSD_1.0

NPY1R
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	52,152,646 - 52,162,328 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	52,152,649 - 52,163,080 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	55,280,107 - 55,290,551 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NPY1R
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	109,774,700 - 109,794,543 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	109,774,918 - 109,776,905 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	89,580,043 - 89,600,565 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Npy1r
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	13,536,493 - 13,545,599 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624758	13,542,467 - 13,545,106 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005329278	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021729088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000007187 ⟹ ENSSTOP00000006423

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936555	2,267,669 - 2,276,778 (+)	Ensembl

RefSeq Acc Id:

XM_005329278 ⟹ XP_005329335

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,293,825 - 16,302,579 (-)	NCBI
SpeTri2.0	NW_004936555	2,267,962 - 2,276,673 (+)	NCBI

Sequence:

show sequence

CTATCTTCAGCAATCTTTAGGATTCGAGCAGGAGAAATACCGGAGGATCTTTCCTCCCCTCTCT
GCGCCTTTCCATGACTCCCTTCTCGCTTTAACAAACAGGGGCGGAAAAGACGAATTCGAAAGAG
GATTGTTCAGTTCAAGGGAATGAAGAATTCAGAATAATTGTGGTAAATGGATTCCAATATGGAG
CATAAGAATAAGCTGTACAGTTGACCTGCTTTGAAGAAACATACTGTTCTCTTGTGAAATCTGT
AAAAACAAAACCAATCAAAATGAATTCAACATTACTTTCTCAGGTTGAAAATCATTCAGTGCAC
TATAATTTGTCAGAGGAGAGTTCCCCATTTTTGGCTTTTGAAAACGATGATTGTCACCTGCCCT
TGGCTGTGATATTTACCCTAGCTCTTGCTTATGGAGCTGTGATCATTCTTGGGGTCTCTGGAAA
CCTGGCTTTGATCATAATCATCTTGAAGCAGAAAGAGATGAGGAATGTCACCAACATCCTGATT
GTGAATCTTTCCTTCTCAGACTTGCTCGTCGCCATCATGTGTCTCCCGTTCACGTTTGTGTACA
CGCTGATGGACCACTGGGTCTTTGGTGAGACCATGTGCAAGCTGAATCCTTTTGTGCAATGTGT
TTCCATCACCGTGTCCATTTTCTCTCTGGTTCTCATTGCGGTGGAACGCCATCAGCTGATAATC
AACCCACGAGGGTGGAGACCAAGTAATAGACATGCTTACATAGGTATTGCTGTCATTTGGGTCC
TTGCTGTGGCTTCTTCTCTGCCCTTCCTGATCTATCAAGTCTTGACCGATGAGCCATTCCAAAA
TCTAACGCTTGATGCATTCAAAGACAAGTATGTGTGCTTTGATAAATTTCCCTCGGACTCTCAT
AGGTTGTCTTACACTACTCTCCTCTTGGTGCTGCAGTACTTTGGCCCACTCTGCTTTATATTTA
TATGCTACTTCAAGATATACATTCGCTTAAAAAGGAGAAATAACATGATGGACAAGATGAGAGA
CAATAAATACAGGTCAAGTGAAACCAAAAGAATCAACATCATGCTGCTGTCCATCGTGGTAGCG
TTTGCAGTCTGCTGGCTGCCTCTCACCATCTTTAACACTGTGTTTGATTGGAATCATCAGATCA
TTGCTACGTGCAACCACAATCTGTTATTCCTGCTCTGCCACCTCACGGCAATGATCTCCACCTG
CGTCAACCCTGTATTTTATGGATTCCTCAACAAAAACTTCCAGAGAGACTTGCAGTTCTTCTTT
AACTTTTGTGATTTCCGGTCTCGGGATGATGACTATGAGACAATAGCCATGTCCACCATGCACA
CGGATGTTTCTAAGACTTCTTTGAAACAAGCAAGCCCAGTCGCATTTAAAAAAATCAATAATGA
TGATAACGAAAAAATCTGAAACTCCTTGGAGTGTATGGTCCCAGAATACGTCTGCTTAAAAGCA
AGCGTAGCCAGACATGTATACTTTCATTACCTGTTCTCCATGGAACAGGACTAAAGTCATTTAA
GAAAGACTGAGATCTCCCTGTCTTGCATTTTACTGCTTTTGTTATGGTTGTCATGATTACATTT
GGAACAAAATGTATGGGTTTTGGCATCTCCTGGTAATCATATTCACCAGACTTTCTTCAAGTGC
TTTTTGAGGAATTATGCATTTAACAACTTTTAAGACTATATTTATTGGAATGAAATTTCTCTGA
AGTATAACTTTGAACCAATGTCAGAAGCCCTAGCGACTGATACCTTCATTACATTGGGCCATTC
TGAGTGTCAGTAGATTGAGCTACCCTTCTTTAATGATAGGTGTCATTTTAGTCTGAAACAGAGG
TGACAGCATGCAAAAAATCTACATTCAGGATGTTGAACCAAAAAAGAGGTGAAATTAATCAGGA
GTGATCTGCTTTTTTTTAATCTTTTTTTTTTTTAAGAGAAGTTACTTTGCTCCTCCCAATGAAG
TATCACTTAAATTAAGATGAGAATACACAAAATGCTTTTCAGCTGTGAATATCATAGGGTTTTG
GACCACCCACAAGAATCAGTGGGAAAATAGTTTCCTAATTTCAAAACTATTTTGGAACCTGACA
ACCAAAGCATTTCAGGATAATTAGTTTAATAAGTAAATTAATATTGCTACAAATAAGTAAATTG
TATTCATTTGAATTGAGAGTGAAGAGTTTTTACATTCCTTACAGACTGCTCAGTGTTTGTCAAG
CTTTTTGGCGTAAACATATAATTCAAAAGGCTTTTCCAGCTTACAATGTATTTTCTTCACAGCA
GTGCCTATAGTAGTCGCTCACTTTTAAATTTCACTGTACGTCTTTCAAAGCAGAGGACACCAAG
GGACAATGTTAAAAGGATATTCATTGTAGCTTGCAGGGATGAATACTTAACCACTTCTTATAGC
CCATGTTAACTTGTATAAACTGTGTGACTTGTGGAGTTTATGAATCATGCACTACATAGAGTAC
TGACTGAGTAGTTGTGTCACCTTGATATATTTAATTTCATGTACCTTGTGATCACAGTTGAGCC
TCAGAATCATTTGTAGAAAAGACATTTTGAAGAACAAGTCATATTTTCAATGTATTATACAAAG
TATTAAATGTATTTTGTTTAAAAGAAGGGCAAACACTTTCTCTATTAAAATTGTTTTTGCTTTT
CCTGGGGGCACGGCGGGATCTACTGTTTCTGTCTTCAGCTTCGTGTTTTTTTTCTCGTGCCATG
ACTCTCATAGTGTCCCCACGGCCCCAGTTTCAGCTTGATAAATGAGACATTTTCTACTCTGGAA
GAACCACTTTTGGCCGAGTCACCCTGCCTTGCTGGATTGAAAGTTTCTTGAAGGCAAGGATTAT
CTAATGTGACTGTCCCCAGTGCATATGGCACAGGACCAAGTACTTAGAAGTTTTTCAAAAAGTA
ATTCTAAATTGAATGAATGAAAGACCAAATTTTTTCCTTCCCTCCCATTTATGATCATATTGAA
TTCTCATCCCGATGTTTGCTTGACTACTTCTTCCTAAATTCCTCTTTACCAAGAAAGTGTTTTT
TCTTCTACTGTATTATTTTCATTCCTCATTGAAGCAAAAGTGACATTGTAGATCTTGGAAACAT
GTCATTAGCCTTGTAAGTCAAATATCTAACTTTTTCCATTGAATGTTAATATGAAATTAAATCA
TAGCCTAAGAATGTCCTTTAGTTACATGAATAAAGAAAAAAACAGT

hide sequence

RefSeq Acc Id:

XM_021729088 ⟹ XP_021584763

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,293,825 - 16,302,873 (-)	NCBI
SpeTri2.0	NW_004936555	2,267,727 - 2,276,673 (+)	NCBI

Sequence:

show sequence

TGCGGGCTCACTTCCCCCGGCACGGTGGCATGGTGGCACGGTGGCACGGTGCGTGTGTCTGACA
GCGTGCGTTCAGGCTGATGGTCTTTCTCTCCCGAATTCCTAGGCAACGTACCTTCGAGGTGTAC
ATCCAAGATTGTTCAGTTCAAGGGAATGAAGAATTCAGAATAATTGTGGTAAATGGATTCCAAT
ATGGAGCATAAGAATAAGCTGTACAGTTGACCTGCTTTGAAGAAACATACTGTTCTCTTGTGAA
ATCTGTAAAAACAAAACCAATCAAAATGAATTCAACATTACTTTCTCAGGTTGAAAATCATTCA
GTGCACTATAATTTGTCAGAGGAGAGTTCCCCATTTTTGGCTTTTGAAAACGATGATTGTCACC
TGCCCTTGGCTGTGATATTTACCCTAGCTCTTGCTTATGGAGCTGTGATCATTCTTGGGGTCTC
TGGAAACCTGGCTTTGATCATAATCATCTTGAAGCAGAAAGAGATGAGGAATGTCACCAACATC
CTGATTGTGAATCTTTCCTTCTCAGACTTGCTCGTCGCCATCATGTGTCTCCCGTTCACGTTTG
TGTACACGCTGATGGACCACTGGGTCTTTGGTGAGACCATGTGCAAGCTGAATCCTTTTGTGCA
ATGTGTTTCCATCACCGTGTCCATTTTCTCTCTGGTTCTCATTGCGGTGGAACGCCATCAGCTG
ATAATCAACCCACGAGGGTGGAGACCAAGTAATAGACATGCTTACATAGGTATTGCTGTCATTT
GGGTCCTTGCTGTGGCTTCTTCTCTGCCCTTCCTGATCTATCAAGTCTTGACCGATGAGCCATT
CCAAAATCTAACGCTTGATGCATTCAAAGACAAGTATGTGTGCTTTGATAAATTTCCCTCGGAC
TCTCATAGGTTGTCTTACACTACTCTCCTCTTGGTGCTGCAGTACTTTGGCCCACTCTGCTTTA
TATTTATATGCTACTTCAAGATATACATTCGCTTAAAAAGGAGAAATAACATGATGGACAAGAT
GAGAGACAATAAATACAGGTCAAGTGAAACCAAAAGAATCAACATCATGCTGCTGTCCATCGTG
GTAGCGTTTGCAGTCTGCTGGCTGCCTCTCACCATCTTTAACACTGTGTTTGATTGGAATCATC
AGATCATTGCTACGTGCAACCACAATCTGTTATTCCTGCTCTGCCACCTCACGGCAATGATCTC
CACCTGCGTCAACCCTGTATTTTATGGATTCCTCAACAAAAACTTCCAGAGAGACTTGCAGTTC
TTCTTTAACTTTTGTGATTTCCGGTCTCGGGATGATGACTATGAGACAATAGCCATGTCCACCA
TGCACACGGATGTTTCTAAGACTTCTTTGAAACAAGCAAGCCCAGTCGCATTTAAAAAAATCAA
TAATGATGATAACGAAAAAATCTGAAACTCCTTGGAGTGTATGGTCCCAGAATACGTCTGCTTA
AAAGCAAGCGTAGCCAGACATGTATACTTTCATTACCTGTTCTCCATGGAACAGGACTAAAGTC
ATTTAAGAAAGACTGAGATCTCCCTGTCTTGCATTTTACTGCTTTTGTTATGGTTGTCATGATT
ACATTTGGAACAAAATGTATGGGTTTTGGCATCTCCTGGTAATCATATTCACCAGACTTTCTTC
AAGTGCTTTTTGAGGAATTATGCATTTAACAACTTTTAAGACTATATTTATTGGAATGAAATTT
CTCTGAAGTATAACTTTGAACCAATGTCAGAAGCCCTAGCGACTGATACCTTCATTACATTGGG
CCATTCTGAGTGTCAGTAGATTGAGCTACCCTTCTTTAATGATAGGTGTCATTTTAGTCTGAAA
CAGAGGTGACAGCATGCAAAAAATCTACATTCAGGATGTTGAACCAAAAAAGAGGTGAAATTAA
TCAGGAGTGATCTGCTTTTTTTTAATCTTTTTTTTTTTTAAGAGAAGTTACTTTGCTCCTCCCA
ATGAAGTATCACTTAAATTAAGATGAGAATACACAAAATGCTTTTCAGCTGTGAATATCATAGG
GTTTTGGACCACCCACAAGAATCAGTGGGAAAATAGTTTCCTAATTTCAAAACTATTTTGGAAC
CTGACAACCAAAGCATTTCAGGATAATTAGTTTAATAAGTAAATTAATATTGCTACAAATAAGT
AAATTGTATTCATTTGAATTGAGAGTGAAGAGTTTTTACATTCCTTACAGACTGCTCAGTGTTT
GTCAAGCTTTTTGGCGTAAACATATAATTCAAAAGGCTTTTCCAGCTTACAATGTATTTTCTTC
ACAGCAGTGCCTATAGTAGTCGCTCACTTTTAAATTTCACTGTACGTCTTTCAAAGCAGAGGAC
ACCAAGGGACAATGTTAAAAGGATATTCATTGTAGCTTGCAGGGATGAATACTTAACCACTTCT
TATAGCCCATGTTAACTTGTATAAACTGTGTGACTTGTGGAGTTTATGAATCATGCACTACATA
GAGTACTGACTGAGTAGTTGTGTCACCTTGATATATTTAATTTCATGTACCTTGTGATCACAGT
TGAGCCTCAGAATCATTTGTAGAAAAGACATTTTGAAGAACAAGTCATATTTTCAATGTATTAT
ACAAAGTATTAAATGTATTTTGTTTAAAAGAAGGGCAAACACTTTCTCTATTAAAATTGTTTTT
GCTTTTCCTGGGGGCACGGCGGGATCTACTGTTTCTGTCTTCAGCTTCGTGTTTTTTTTCTCGT
GCCATGACTCTCATAGTGTCCCCACGGCCCCAGTTTCAGCTTGATAAATGAGACATTTTCTACT
CTGGAAGAACCACTTTTGGCCGAGTCACCCTGCCTTGCTGGATTGAAAGTTTCTTGAAGGCAAG
GATTATCTAATGTGACTGTCCCCAGTGCATATGGCACAGGACCAAGTACTTAGAAGTTTTTCAA
AAAGTAATTCTAAATTGAATGAATGAAAGACCAAATTTTTTCCTTCCCTCCCATTTATGATCAT
ATTGAATTCTCATCCCGATGTTTGCTTGACTACTTCTTCCTAAATTCCTCTTTACCAAGAAAGT
GTTTTTTCTTCTACTGTATTATTTTCATTCCTCATTGAAGCAAAAGTGACATTGTAGATCTTGG
AAACATGTCATTAGCCTTGTAAGTCAAATATCTAACTTTTTCCATTGAATGTTAATATGAAATT
AAATCATAGCCTAAGAATGTCCTTTAGTTACATGAATAAAGAAAAAAACAGT

hide sequence

RefSeq Acc Id:

XM_040293417 ⟹ XP_040149351

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,293,825 - 16,302,579 (-)	NCBI

RefSeq Acc Id:

XM_040293419 ⟹ XP_040149353

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404943	16,293,825 - 16,314,919 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005329335	(Get FASTA)	NCBI Sequence Viewer
	XP_021584763	(Get FASTA)	NCBI Sequence Viewer
	XP_040149351	(Get FASTA)	NCBI Sequence Viewer
	XP_040149353	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000006423.1
GenBank Protein	KAG3294457	(Get FASTA)	NCBI Sequence Viewer
	KAG3294458	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005329335 ⟸ XM_005329278

- UniProtKB:

I3M994 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNSTLLSQVENHSVHYNLSEESSPFLAFENDDCHLPLAVIFTLALAYGAVIILGVSGNLALIII
ILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGETMCKLNPFVQCVSITVSI
FSLVLIAVERHQLIINPRGWRPSNRHAYIGIAVIWVLAVASSLPFLIYQVLTDEPFQNLTLDAF
KDKYVCFDKFPSDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNNMMDKMRDNKYRSS
ETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIATCNHNLLFLLCHLTAMISTCVNPVFY
GFLNKNFQRDLQFFFNFCDFRSRDDDYETIAMSTMHTDVSKTSLKQASPVAFKKINNDDNEKI

hide sequence

RefSeq Acc Id:

XP_021584763 ⟸ XM_021729088

- UniProtKB:

I3M994 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNSTLLSQVENHSVHYNLSEESSPFLAFENDDCHLPLAVIFTLALAYGAVIILGVSGNLALIII
ILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGETMCKLNPFVQCVSITVSI
FSLVLIAVERHQLIINPRGWRPSNRHAYIGIAVIWVLAVASSLPFLIYQVLTDEPFQNLTLDAF
KDKYVCFDKFPSDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNNMMDKMRDNKYRSS
ETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIATCNHNLLFLLCHLTAMISTCVNPVFY
GFLNKNFQRDLQFFFNFCDFRSRDDDYETIAMSTMHTDVSKTSLKQASPVAFKKINNDDNEKI

hide sequence

RefSeq Acc Id:	XP_040149353 ⟸ XM_040293419
- UniProtKB:	I3M994 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040149351 ⟸ XM_040293417
- UniProtKB:	I3M994 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000006423 ⟸ ENSSTOT00000007187

Protein Domains

G-protein coupled receptors family 1 profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000007201	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000007187.2	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	NPY1_rcpt	UniProtKB/TrEMBL
	NPY_rcpt	UniProtKB/TrEMBL
NCBI Gene	Npy1r	ENTREZGENE
PANTHER	NEUROPEPTIDE Y RECEPTOR	UniProtKB/TrEMBL
	PTHR24235:SF24	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	NRPEPTIDEY1R	UniProtKB/TrEMBL
	NRPEPTIDEYR	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	I3M994	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Send us a Message

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI