Msn (moesin) - Rat Genome Database

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Gene: Msn (moesin) Ictidomys tridecemlineatus
Analyze
Symbol: Msn
Name: moesin
RGD ID: 12533745
Description: ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN positive regulation of podosome assembly (ortholog); regulation of cell size (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cell tip (ortholog); cytoplasmic side of plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: moesin, transcript variant X1; moesin, transcript variant X2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X51,624,794 - 51,696,281 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366352,389,823 - 2,461,930 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366352,390,390 - 2,461,870 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Msn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X51,624,794 - 51,696,281 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366352,389,823 - 2,461,930 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366352,390,390 - 2,461,870 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MSN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X65,588,377 - 65,741,931 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX65,588,377 - 65,741,931 (+)EnsemblGRCh38hg38GRCh38
GRCh37X64,887,521 - 64,961,793 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X64,804,236 - 64,878,518 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X64,670,531 - 64,744,813NCBI
CeleraX65,234,645 - 65,308,924 (+)NCBICelera
Cytogenetic MapXq12NCBI
HuRefX58,715,854 - 58,790,104 (+)NCBIHuRef
CHM1_1X64,780,526 - 64,854,813 (+)NCBICHM1_1
T2T-CHM13v2.0X64,014,795 - 64,168,344 (+)NCBIT2T-CHM13v2.0
Msn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X95,139,651 - 95,212,159 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX95,139,648 - 95,212,158 (+)EnsemblGRCm39 Ensembl
GRCm38X96,096,045 - 96,168,553 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX96,096,042 - 96,168,552 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X93,291,384 - 93,363,892 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X92,298,764 - 92,371,272 (+)NCBIMGSCv36mm8
MGSCv36X78,937,756 - 79,010,624 (+)NCBIMGSCv36mm8
CeleraX83,101,832 - 83,174,019 (+)NCBICelera
Cytogenetic MapXC3NCBI
cM MapX42.65NCBI
Msn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X65,005,546 - 65,073,512 (+)NCBIGRCr8
mRatBN7.2X60,996,043 - 61,064,011 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX60,995,951 - 61,065,628 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX62,461,999 - 62,529,852 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X65,962,516 - 66,030,370 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X63,527,452 - 63,595,461 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X65,226,834 - 65,294,192 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX65,226,748 - 65,295,810 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X66,068,480 - 66,135,838 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X83,716,068 - 83,784,214 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X83,789,359 - 83,857,506 (+)NCBI
CeleraX61,409,205 - 61,477,230 (+)NCBICelera
Cytogenetic MapXq22NCBI
Msn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554755,301,910 - 5,370,691 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554755,301,856 - 5,370,378 (+)NCBIChiLan1.0ChiLan1.0
MSN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X65,193,477 - 65,267,583 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X65,197,098 - 65,271,188 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X54,785,309 - 54,859,364 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X64,859,691 - 64,933,014 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX64,781,550 - 64,933,292 (+)Ensemblpanpan1.1panPan2
MSN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X50,708,913 - 50,775,404 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX50,708,704 - 50,773,762 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX41,546,746 - 41,613,249 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X51,673,014 - 51,739,539 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX51,672,882 - 51,739,537 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X49,637,614 - 49,704,123 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X50,985,533 - 51,052,067 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X50,900,835 - 50,967,356 (+)NCBIUU_Cfam_GSD_1.0
MSN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX51,844,156 - 51,970,107 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X51,844,197 - 51,967,674 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X58,473,234 - 58,596,676 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MSN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X55,660,262 - 55,734,605 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX55,660,234 - 55,735,191 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660832,953,269 - 3,027,796 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Msn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248981,525,388 - 1,601,539 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248981,525,795 - 1,601,402 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000013341   ⟹   ENSSTOP00000011956
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366352,389,823 - 2,461,930 (-)Ensembl
RefSeq Acc Id: XM_005335204   ⟹   XP_005335261
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2X51,624,794 - 51,696,281 (-)NCBI
SpeTri2.0NW_0049366352,390,390 - 2,461,870 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005335261 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000011956.2
GenBank Protein KAG3272425 (Get FASTA)   NCBI Sequence Viewer  
  KAG3272426 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005335261   ⟸   XM_005335204
- UniProtKB: I3MKT8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSTOP00000011956   ⟸   ENSSTOT00000013341
Protein Domains
FERM


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000013341 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000013341.3 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.450 UniProtKB/TrEMBL
  1.20.80.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
  6.10.360.10 UniProtKB/TrEMBL
InterPro Band_41_domain UniProtKB/TrEMBL
  ERM UniProtKB/TrEMBL
  ERM_C_dom UniProtKB/TrEMBL
  ERM_FERM_C UniProtKB/TrEMBL
  ERM_helical UniProtKB/TrEMBL
  Ez/rad/moesin-like UniProtKB/TrEMBL
  FERM/acyl-CoA-bd_prot_sf UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_central UniProtKB/TrEMBL
  FERM_CS UniProtKB/TrEMBL
  FERM_domain UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
  FERM_PH-like_C UniProtKB/TrEMBL
  Moesin_tail_sf UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/TrEMBL
NCBI Gene Msn ENTREZGENE
PANTHER MOESIN UniProtKB/TrEMBL
  PTHR23281 UniProtKB/TrEMBL
Pfam ERM_C UniProtKB/TrEMBL
  ERM_helical UniProtKB/TrEMBL
  FERM_C UniProtKB/TrEMBL
  FERM_M UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
PIRSF ERM UniProtKB/TrEMBL
PRINTS BAND41 UniProtKB/TrEMBL
  ERMFAMILY UniProtKB/TrEMBL
PROSITE FERM_1 UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_3 UniProtKB/TrEMBL
SMART B41 UniProtKB/TrEMBL
  FERM_C UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF47031 UniProtKB/TrEMBL
  SSF48678 UniProtKB/TrEMBL
  SSF54236 UniProtKB/TrEMBL
UniProt I3MKT8 ENTREZGENE, UniProtKB/TrEMBL