Symbol:
Laptm4b
Name:
lysosomal protein transmembrane 4 beta
RGD ID:
12489117
Description:
ENCODES a protein that exhibits ceramide binding (inferred); kinase binding (inferred); phosphatidylinositol bisphosphate binding (inferred); INVOLVED IN endosome organization (inferred); endosome transport via multivesicular body sorting pathway (inferred); negative regulation of lysosomal protein catabolic process (inferred); FOUND IN cell projection (inferred); early endosome (inferred); endomembrane system (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
lysosomal-associated transmembrane protein 4B
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405303 37,491,363 - 37,555,672 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936470 44,914,011 - 44,982,065 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936470 44,917,462 - 44,981,773 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Laptm4b Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405303 37,491,363 - 37,555,672 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936470 44,914,011 - 44,982,065 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936470 44,917,462 - 44,981,773 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
LAPTM4B Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 8 97,775,788 - 97,853,013 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 8 97,775,057 - 97,853,013 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 8 98,788,016 - 98,865,241 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 8 98,856,985 - 98,934,006 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 8 98,856,984 - 98,933,998 NCBI Celera 8 94,973,714 - 95,050,765 (+) NCBI Celera Cytogenetic Map 8 q22.1 NCBI HuRef 8 93,993,667 - 94,068,953 (+) NCBI HuRef CHM1_1 8 98,828,294 - 98,905,316 (+) NCBI CHM1_1 T2T-CHM13v2.0 8 98,901,267 - 98,978,513 (+) NCBI T2T-CHM13v2.0
Laptm4b Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 15 34,238,279 - 34,284,448 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 15 34,238,174 - 34,284,448 (+) Ensembl GRCm39 Ensembl GRCm38 15 34,238,026 - 34,284,295 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 15 34,238,028 - 34,284,302 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 15 34,167,781 - 34,214,050 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 15 34,182,615 - 34,228,884 (+) NCBI MGSCv36 mm8 Celera 15 34,858,574 - 34,904,967 (+) NCBI Celera Cytogenetic Map 15 B3.1 NCBI cM Map 15 13.98 NCBI
Laptm4b Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 67,319,438 - 67,362,547 (+) NCBI GRCr8 mRatBN7.2 7 65,434,525 - 65,477,386 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 65,434,394 - 65,477,383 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 7 67,323,714 - 67,366,569 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 7 69,525,436 - 69,568,294 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 7 69,391,712 - 69,434,580 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 7 72,924,911 - 72,968,099 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 72,924,799 - 72,968,101 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 73,094,975 - 73,138,163 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 7 69,654,990 - 69,697,852 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 7 69,675,719 - 69,718,578 (+) NCBI Celera 7 62,539,514 - 62,582,361 (+) NCBI Celera Cytogenetic Map 7 q22 NCBI
Laptm4b Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955417 13,574,721 - 13,625,313 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955417 13,574,493 - 13,625,669 (+) NCBI ChiLan1.0 ChiLan1.0
LAPTM4B Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 7 115,118,902 - 115,196,183 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 8 90,660,516 - 90,737,745 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 8 94,414,275 - 94,491,483 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 8 96,600,799 - 96,677,927 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 8 96,600,799 - 96,677,927 (+) Ensembl panpan1.1 panPan2
LAPTM4B Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 13 41,134 - 127,399 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 13 41,121 - 127,182 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 13 32,510 - 121,655 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 13 189,696 - 275,803 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 13 189,690 - 278,080 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 13 33,907 - 119,927 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 13 141,792 - 227,784 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 13 147,644 - 233,653 (+) NCBI UU_Cfam_GSD_1.0
LAPTM4B Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 4 38,932,742 - 39,023,925 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 4 38,932,735 - 39,015,219 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 4 41,977,266 - 42,060,047 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
LAPTM4B
Laptm4b
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000019572 ⟹ ENSSTOP00000016493
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936470 44,914,011 - 44,982,065 (-) Ensembl
RefSeq Acc Id:
XM_005316317 ⟹ XP_005316374
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405303 37,491,363 - 37,555,672 (-) NCBI SpeTri2.0 NW_004936470 44,917,462 - 44,981,773 (-) NCBI
Sequence:
CTCCCTCTGCCCTCCTGCCCGCGCCGCAGCCTTCGAGCGCACGGTCCCGCCGCCGCAGCTTCTCGGAGCTTTCGGGGTAGCTCGGCGCCAGGCGAGTGGGTTAGCTGGTCTGGAGCGTGAGCGGCGGA
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RefSeq Acc Id:
XP_005316374 ⟸ XM_005316317
- UniProtKB:
I3MWJ8 (UniProtKB/TrEMBL)
- Sequence:
MKMVAPWTRFYSNSCCLCCHVRTGTILLGVWYLIINAVVLLILLSALADPDQYHFSSTELGGDFEFMDDANMCIAIAVSLLMILICAMATYGAYKQHAAWIIPFFCYQIFDFALNTLVAVTVLVYPNS
hide sequence
Ensembl Acc Id:
ENSSTOP00000016493 ⟸ ENSSTOT00000019572
