MEST (mesoderm specific transcript) - Rat Genome Database

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Gene: MEST (mesoderm specific transcript) Canis lupus familiaris
Analyze
Symbol: MEST
Name: mesoderm specific transcript
RGD ID: 12396734
Description: ENCODES a protein that exhibits acylglycerol lipase activity (inferred); catalytic activity (inferred); INVOLVED IN regulation of lipid storage (ortholog); response to retinoic acid (ortholog); ASSOCIATED WITH Barth syndrome (ortholog); Childhood Schizophrenia (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mesoderm specific transcript homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1146,435,693 - 6,454,358 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl146,436,649 - 6,449,099 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha146,125,719 - 6,144,389 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0146,199,967 - 6,218,643 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl146,199,384 - 6,213,400 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1146,405,014 - 6,423,685 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0146,150,268 - 6,168,916 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0146,293,802 - 6,312,481 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
MEST
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1146,435,693 - 6,454,358 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl146,436,649 - 6,449,099 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha146,125,719 - 6,144,389 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0146,199,967 - 6,218,643 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl146,199,384 - 6,213,400 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1146,405,014 - 6,423,685 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0146,150,268 - 6,168,916 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0146,293,802 - 6,312,481 (-)NCBIUU_Cfam_GSD_1.0
MEST
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387130,486,175 - 130,506,465 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7130,486,171 - 130,506,465 (+)EnsemblGRCh38hg38GRCh38
GRCh377130,126,016 - 130,146,306 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367129,913,282 - 129,933,369 (+)NCBINCBI36Build 36hg18NCBI36
Build 347129,725,123 - 129,740,080NCBI
Celera7124,921,818 - 124,941,908 (+)NCBICelera
Cytogenetic Map7q32.2NCBI
HuRef7124,488,506 - 124,508,626 (+)NCBIHuRef
CHM1_17130,059,437 - 130,079,559 (+)NCBICHM1_1
T2T-CHM13v2.07131,799,896 - 131,820,184 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27129,511,419 - 129,531,544 (+)NCBI
Mest
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39630,733,505 - 30,783,580 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl630,723,546 - 30,748,464 (+)EnsemblGRCm39 Ensembl
GRCm38630,733,506 - 30,748,466 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl630,723,547 - 30,748,465 (+)EnsemblGRCm38mm10GRCm38
MGSCv37630,688,063 - 30,698,457 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36630,688,073 - 30,698,467 (+)NCBIMGSCv36mm8
Celera630,747,989 - 30,758,382 (+)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map612.53NCBI
Mest
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8460,321,814 - 60,332,288 (+)NCBIGRCr8
mRatBN7.2459,354,445 - 59,364,919 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl459,354,447 - 59,366,145 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx464,332,471 - 64,342,948 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0460,248,654 - 60,259,132 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0458,650,583 - 58,661,061 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0458,052,786 - 58,063,227 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl458,053,041 - 58,063,138 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0457,811,101 - 57,821,884 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera454,452,983 - 54,463,392 (+)NCBICelera
Cytogenetic Map4q22NCBI
Mest
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547911,122,007 - 11,135,061 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495547911,116,705 - 11,135,061 (+)NCBIChiLan1.0ChiLan1.0
MEST
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26167,305,254 - 167,325,372 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1719,315,515 - 19,335,616 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07122,450,524 - 122,470,855 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17134,968,531 - 134,988,560 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7134,968,638 - 134,988,564 (+)Ensemblpanpan1.1panPan2
Mest
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511824,648,250 - 24,668,374 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365794,782,761 - 4,800,971 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEST
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1818,327,536 - 18,345,843 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11818,319,126 - 18,358,655 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21819,327,977 - 19,348,140 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MEST
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12199,121,330 - 99,141,861 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2199,127,403 - 99,140,638 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660424,258,347 - 4,279,119 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mest
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247835,799,057 - 5,811,110 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247835,798,141 - 5,816,595 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MEST
139 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 12 12 8 4
Low 5 5 4 3 6 6 6 6
Below cutoff 6 6 3 6

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014118996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038444618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038494202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038494203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038494204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038494205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038494206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038494207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038494208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038494209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038686114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038686115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038686116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038686117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038686118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038686119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038686120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038686121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_843586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000002268   ⟹   ENSCAFP00000002104
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl146,436,649 - 6,449,099 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000083673   ⟹   ENSCAFP00000047733
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl146,436,649 - 6,449,099 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845030203   ⟹   ENSCAFP00845023682
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl146,199,384 - 6,213,400 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845030230   ⟹   ENSCAFP00845023706
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl146,199,384 - 6,213,400 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845030284   ⟹   ENSCAFP00845023746
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl146,199,764 - 6,213,284 (-)Ensembl
RefSeq Acc Id: XM_014118996   ⟹   XP_013974471
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1146,435,693 - 6,449,104 (-)NCBI
Dog10K_Boxer_Tasha146,125,719 - 6,139,046 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427209   ⟹   XP_022282917
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1146,435,693 - 6,449,104 (-)NCBI
Dog10K_Boxer_Tasha146,125,719 - 6,139,046 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427211   ⟹   XP_022282919
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1146,435,693 - 6,454,358 (-)NCBI
Dog10K_Boxer_Tasha146,125,719 - 6,144,389 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427212   ⟹   XP_022282920
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1146,435,693 - 6,448,618 (-)NCBI
Dog10K_Boxer_Tasha146,125,719 - 6,138,595 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427213   ⟹   XP_022282921
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1146,435,693 - 6,448,618 (-)NCBI
Dog10K_Boxer_Tasha146,125,719 - 6,138,595 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427214   ⟹   XP_022282922
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1146,435,693 - 6,449,105 (-)NCBI
Dog10K_Boxer_Tasha146,125,719 - 6,139,046 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038444618   ⟹   XP_038300546
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha146,125,719 - 6,137,926 (-)NCBI
RefSeq Acc Id: XM_038494202   ⟹   XP_038350130
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1146,405,014 - 6,418,336 (-)NCBI
RefSeq Acc Id: XM_038494203   ⟹   XP_038350131
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1146,405,014 - 6,418,417 (-)NCBI
RefSeq Acc Id: XM_038494204   ⟹   XP_038350132
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1146,405,014 - 6,423,685 (-)NCBI
RefSeq Acc Id: XM_038494205   ⟹   XP_038350133
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1146,405,014 - 6,417,885 (-)NCBI
RefSeq Acc Id: XM_038494206   ⟹   XP_038350134
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1146,405,014 - 6,417,885 (-)NCBI
RefSeq Acc Id: XM_038494207   ⟹   XP_038350135
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1146,405,014 - 6,417,216 (-)NCBI
RefSeq Acc Id: XM_038494208   ⟹   XP_038350136
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1146,405,014 - 6,418,336 (-)NCBI
RefSeq Acc Id: XM_038494209   ⟹   XP_038350137
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1146,405,014 - 6,418,336 (-)NCBI
RefSeq Acc Id: XM_038556495   ⟹   XP_038412423
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0146,293,802 - 6,307,131 (-)NCBI
RefSeq Acc Id: XM_038556496   ⟹   XP_038412424
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0146,293,802 - 6,307,212 (-)NCBI
RefSeq Acc Id: XM_038556497   ⟹   XP_038412425
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0146,293,802 - 6,312,481 (-)NCBI
RefSeq Acc Id: XM_038556498   ⟹   XP_038412426
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0146,293,802 - 6,306,680 (-)NCBI
RefSeq Acc Id: XM_038556499   ⟹   XP_038412427
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0146,293,802 - 6,306,680 (-)NCBI
RefSeq Acc Id: XM_038556500   ⟹   XP_038412428
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0146,293,802 - 6,306,011 (-)NCBI
RefSeq Acc Id: XM_038556501   ⟹   XP_038412429
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0146,293,802 - 6,307,131 (-)NCBI
RefSeq Acc Id: XM_038556502   ⟹   XP_038412430
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0146,293,802 - 6,307,131 (-)NCBI
RefSeq Acc Id: XM_038620429   ⟹   XP_038476357
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0146,150,268 - 6,163,574 (-)NCBI
RefSeq Acc Id: XM_038620430   ⟹   XP_038476358
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0146,150,268 - 6,163,655 (-)NCBI
RefSeq Acc Id: XM_038620431   ⟹   XP_038476359
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0146,150,268 - 6,168,916 (-)NCBI
RefSeq Acc Id: XM_038620432   ⟹   XP_038476360
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0146,150,268 - 6,163,123 (-)NCBI
RefSeq Acc Id: XM_038620433   ⟹   XP_038476361
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0146,150,268 - 6,163,123 (-)NCBI
RefSeq Acc Id: XM_038620434   ⟹   XP_038476362
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0146,150,268 - 6,162,454 (-)NCBI
RefSeq Acc Id: XM_038620435   ⟹   XP_038476363
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0146,150,268 - 6,163,574 (-)NCBI
RefSeq Acc Id: XM_038620436   ⟹   XP_038476364
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0146,150,268 - 6,163,574 (-)NCBI
RefSeq Acc Id: XM_038686114   ⟹   XP_038542042
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0146,199,967 - 6,213,294 (-)NCBI
RefSeq Acc Id: XM_038686115   ⟹   XP_038542043
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0146,199,967 - 6,213,375 (-)NCBI
RefSeq Acc Id: XM_038686116   ⟹   XP_038542044
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0146,199,967 - 6,218,643 (-)NCBI
RefSeq Acc Id: XM_038686117   ⟹   XP_038542045
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0146,199,967 - 6,212,843 (-)NCBI
RefSeq Acc Id: XM_038686118   ⟹   XP_038542046
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0146,199,967 - 6,212,843 (-)NCBI
RefSeq Acc Id: XM_038686119   ⟹   XP_038542047
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0146,199,967 - 6,212,174 (-)NCBI
RefSeq Acc Id: XM_038686120   ⟹   XP_038542048
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0146,199,967 - 6,213,294 (-)NCBI
RefSeq Acc Id: XM_038686121   ⟹   XP_038542049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0146,199,967 - 6,213,294 (-)NCBI
RefSeq Acc Id: XM_843586   ⟹   XP_848679
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1146,435,699 - 6,449,099 (-)NCBI
Dog10K_Boxer_Tasha146,125,719 - 6,139,127 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013974471 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282917 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282919 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282920 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282921 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282922 (Get FASTA)   NCBI Sequence Viewer  
  XP_038300546 (Get FASTA)   NCBI Sequence Viewer  
  XP_038350130 (Get FASTA)   NCBI Sequence Viewer  
  XP_038350131 (Get FASTA)   NCBI Sequence Viewer  
  XP_038350132 (Get FASTA)   NCBI Sequence Viewer  
  XP_038350133 (Get FASTA)   NCBI Sequence Viewer  
  XP_038350134 (Get FASTA)   NCBI Sequence Viewer  
  XP_038350135 (Get FASTA)   NCBI Sequence Viewer  
  XP_038350136 (Get FASTA)   NCBI Sequence Viewer  
  XP_038350137 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412423 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412424 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412425 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412426 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412427 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412428 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412429 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412430 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476357 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476358 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476359 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476360 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476361 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476362 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476363 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476364 (Get FASTA)   NCBI Sequence Viewer  
  XP_038542042 (Get FASTA)   NCBI Sequence Viewer  
  XP_038542043 (Get FASTA)   NCBI Sequence Viewer  
  XP_038542044 (Get FASTA)   NCBI Sequence Viewer  
  XP_038542045 (Get FASTA)   NCBI Sequence Viewer  
  XP_038542046 (Get FASTA)   NCBI Sequence Viewer  
  XP_038542047 (Get FASTA)   NCBI Sequence Viewer  
  XP_038542048 (Get FASTA)   NCBI Sequence Viewer  
  XP_038542049 (Get FASTA)   NCBI Sequence Viewer  
  XP_848679 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000002104.5
  ENSCAFP00000047733.1
  ENSCAFP00000075071.1
  ENSCAFP00030035811.1
  ENSCAFP00030035870.1
  ENSCAFP00040012089.1
  ENSCAFP00040012144.1
  ENSCAFP00845023682.1
  ENSCAFP00845023706.1
  ENSCAFP00845023746
  ENSCAFP00845023746.1
RefSeq Acc Id: XP_013974471   ⟸   XM_014118996
- Peptide Label: isoform X5
- UniProtKB: A0A8C0LBX6 (UniProtKB/TrEMBL),   A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_848679   ⟸   XM_843586
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RR52 (UniProtKB/TrEMBL),   A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282919   ⟸   XM_022427211
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282922   ⟸   XM_022427214
- Peptide Label: isoform X4
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282917   ⟸   XM_022427209
- Peptide Label: isoform X1
- UniProtKB: A0A8C0QJY2 (UniProtKB/TrEMBL),   A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282921   ⟸   XM_022427213
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282920   ⟸   XM_022427212
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000047733   ⟸   ENSCAFT00000083673
RefSeq Acc Id: ENSCAFP00000002104   ⟸   ENSCAFT00000002268
RefSeq Acc Id: XP_038350132   ⟸   XM_038494204
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038350131   ⟸   XM_038494203
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038350137   ⟸   XM_038494209
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038350136   ⟸   XM_038494208
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038350130   ⟸   XM_038494202
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038350134   ⟸   XM_038494206
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038350133   ⟸   XM_038494205
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038350135   ⟸   XM_038494207
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038476359   ⟸   XM_038620431
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038476358   ⟸   XM_038620430
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038476364   ⟸   XM_038620436
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038476363   ⟸   XM_038620435
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038476357   ⟸   XM_038620429
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038476361   ⟸   XM_038620433
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038476360   ⟸   XM_038620432
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038476362   ⟸   XM_038620434
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038542044   ⟸   XM_038686116
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038542043   ⟸   XM_038686115
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RR52 (UniProtKB/TrEMBL),   A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038542049   ⟸   XM_038686121
- Peptide Label: isoform X5
- UniProtKB: A0A8C0LBX6 (UniProtKB/TrEMBL),   A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038542048   ⟸   XM_038686120
- Peptide Label: isoform X4
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038542042   ⟸   XM_038686114
- Peptide Label: isoform X1
- UniProtKB: A0A8C0QJY2 (UniProtKB/TrEMBL),   A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038542046   ⟸   XM_038686118
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038542045   ⟸   XM_038686117
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038542047   ⟸   XM_038686119
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038300546   ⟸   XM_038444618
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412425   ⟸   XM_038556497
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412424   ⟸   XM_038556496
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RR52 (UniProtKB/TrEMBL),   A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412430   ⟸   XM_038556502
- Peptide Label: isoform X5
- UniProtKB: A0A8C0LBX6 (UniProtKB/TrEMBL),   A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412429   ⟸   XM_038556501
- Peptide Label: isoform X4
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412423   ⟸   XM_038556495
- Peptide Label: isoform X1
- UniProtKB: A0A8C0QJY2 (UniProtKB/TrEMBL),   A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412427   ⟸   XM_038556499
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412426   ⟸   XM_038556498
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412428   ⟸   XM_038556500
- Peptide Label: isoform X3
- UniProtKB: A0A8I3P3U8 (UniProtKB/TrEMBL),   A0A8P0S7D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845023706   ⟸   ENSCAFT00845030230
RefSeq Acc Id: ENSCAFP00845023682   ⟸   ENSCAFT00845030203
RefSeq Acc Id: ENSCAFP00845023746   ⟸   ENSCAFT00845030284
Protein Domains
AB hydrolase-1

Promoters
RGD ID:13685699
Promoter ID:EPDNEW_C3768
Type:multiple initiation site
Name:MEST_1
Description:mesoderm specific transcript
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1146,449,124 - 6,449,184EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000001450 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030022318 UniProtKB/TrEMBL
  ENSCAFG00040007482 UniProtKB/TrEMBL
  ENSCAFG00845017043 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000002268.5 UniProtKB/TrEMBL
  ENSCAFT00000083673.2 UniProtKB/TrEMBL
  ENSCAFT00000104043.1 UniProtKB/TrEMBL
  ENSCAFT00030041045.1 UniProtKB/TrEMBL
  ENSCAFT00030041112.1 UniProtKB/TrEMBL
  ENSCAFT00040013972.1 UniProtKB/TrEMBL
  ENSCAFT00040014032.1 UniProtKB/TrEMBL
  ENSCAFT00845030203.1 UniProtKB/TrEMBL
  ENSCAFT00845030230.1 UniProtKB/TrEMBL
  ENSCAFT00845030284 ENTREZGENE
  ENSCAFT00845030284.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/TrEMBL
InterPro AB_hydrolase UniProtKB/TrEMBL
  AB_hydrolase_1 UniProtKB/TrEMBL
  Epox_hydrolase-like UniProtKB/TrEMBL
NCBI Gene MEST ENTREZGENE
PANTHER MONOACYLGLYCEROL LIPASE UniProtKB/TrEMBL
  MONOACYLGLYCEROL LIPASE ABHD6 UniProtKB/TrEMBL
Pfam Abhydrolase_1 UniProtKB/TrEMBL
PRINTS EPOXHYDRLASE UniProtKB/TrEMBL
Superfamily-SCOP SSF53474 UniProtKB/TrEMBL
UniProt A0A8C0LBX6 ENTREZGENE
  A0A8C0P4H1_CANLF UniProtKB/TrEMBL
  A0A8C0QJY2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RR52 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P3U8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RZM3_CANLF UniProtKB/TrEMBL
  A0A8I3RZM7_CANLF UniProtKB/TrEMBL
  A0A8P0S7D4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TV05_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:43165 ENTREZGENE