GAN (gigaxonin) - Rat Genome Database

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Advanced Search (OLGA)
Gene: GAN (gigaxonin) Canis lupus familiaris
Analyze
Symbol: GAN
Name: gigaxonin
RGD ID: 12387762
Description: INVOLVED IN cytoskeleton organization (inferred); protein ubiquitination (inferred); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); familial cold autoinflammatory syndrome 3 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (inferred); cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: giant axonal neuropathy (gigaxonin)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1570,518,667 - 70,579,398 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl570,530,396 - 70,579,567 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha570,488,907 - 70,528,607 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0570,823,382 - 70,884,349 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl570,827,374 - 70,884,517 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1570,766,100 - 70,826,821 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0570,601,294 - 70,662,010 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0571,079,113 - 71,139,854 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
GAN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1570,518,667 - 70,579,398 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl570,530,396 - 70,579,567 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha570,488,907 - 70,528,607 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0570,823,382 - 70,884,349 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl570,827,374 - 70,884,517 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1570,766,100 - 70,826,821 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0570,601,294 - 70,662,010 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0571,079,113 - 71,139,854 (-)NCBIUU_Cfam_GSD_1.0
GAN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381681,314,962 - 81,390,809 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1681,314,944 - 81,390,884 (+)EnsemblGRCh38hg38GRCh38
GRCh371681,348,567 - 81,424,414 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361679,906,076 - 79,971,441 (+)NCBINCBI36Build 36hg18NCBI36
Build 341679,906,075 - 79,971,441NCBI
Celera1665,645,867 - 65,711,100 (+)NCBICelera
Cytogenetic Map16q23.2NCBI
HuRef1667,103,386 - 67,168,596 (+)NCBIHuRef
CHM1_11682,759,876 - 82,825,083 (+)NCBICHM1_1
T2T-CHM13v2.01687,375,728 - 87,451,557 (+)NCBIT2T-CHM13v2.0
Gan
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398117,884,720 - 117,932,573 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8117,884,874 - 117,942,736 (+)EnsemblGRCm39 Ensembl
GRCm388117,157,981 - 117,205,834 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8117,158,135 - 117,215,997 (+)EnsemblGRCm38mm10GRCm38
MGSCv378119,682,035 - 119,729,086 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368120,044,112 - 120,091,163 (+)NCBIMGSCv36mm8
Celera8121,377,818 - 121,424,875 (+)NCBICelera
Cytogenetic Map8E1NCBI
cM Map863.71NCBI
Gan
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81962,116,600 - 62,173,879 (+)NCBIGRCr8
mRatBN7.21945,207,783 - 45,265,066 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1945,207,184 - 45,254,107 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1952,017,893 - 52,064,198 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01952,670,909 - 52,717,223 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01954,915,137 - 54,961,451 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01949,692,790 - 49,746,178 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1949,695,579 - 49,741,965 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01960,480,642 - 60,533,157 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41947,263,532 - 47,310,683 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11947,268,492 - 47,315,557 (+)NCBI
Celera1944,479,857 - 44,526,017 (+)NCBICelera
Cytogenetic Map19q12NCBI
Gan
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555224,035,672 - 4,090,630 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555224,035,672 - 4,096,845 (+)NCBIChiLan1.0ChiLan1.0
GAN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21891,056,924 - 91,140,629 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11696,976,406 - 97,060,039 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01661,919,004 - 61,994,811 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11681,347,221 - 81,410,363 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1681,347,215 - 81,410,363 (+)Ensemblpanpan1.1panPan2
Gan
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934930,609,452 - 30,661,047 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647528,945,908 - 28,967,653 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647528,913,132 - 28,979,656 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GAN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl66,933,503 - 6,989,653 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.166,921,446 - 6,989,670 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.267,466,847 - 7,524,943 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GAN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1566,754,752 - 66,820,933 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl566,754,893 - 66,816,761 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660479,017,449 - 9,081,670 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gan
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247466,081,033 - 6,126,858 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247466,070,680 - 6,126,949 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GAN
485 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005620659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022419141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038477020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038477021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038477022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038477023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038538205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038538206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038538207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038538208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_546814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000031827   ⟹   ENSCAFP00000029633
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl570,530,396 - 70,579,353 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000063711   ⟹   ENSCAFP00000051378
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl570,530,396 - 70,579,567 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845034718   ⟹   ENSCAFP00845027188
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl570,827,374 - 70,884,517 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845034818   ⟹   ENSCAFP00845027271
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl570,827,374 - 70,884,379 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845034917   ⟹   ENSCAFP00845027346
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl570,827,374 - 70,882,564 (-)Ensembl
RefSeq Acc Id: XM_038477020   ⟹   XP_038332948
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1570,766,100 - 70,826,821 (-)NCBI
RefSeq Acc Id: XM_038477021   ⟹   XP_038332949
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1570,766,100 - 70,825,141 (-)NCBI
RefSeq Acc Id: XM_038477022   ⟹   XP_038332950
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1570,766,100 - 70,826,152 (-)NCBI
RefSeq Acc Id: XM_038477023   ⟹   XP_038332951
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1570,766,100 - 70,826,132 (-)NCBI
RefSeq Acc Id: XM_038526508   ⟹   XP_038382436
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha570,488,907 - 70,528,607 (-)NCBI
RefSeq Acc Id: XM_038526516   ⟹   XP_038382444
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha570,489,837 - 70,526,927 (-)NCBI
RefSeq Acc Id: XM_038526517   ⟹   XP_038382445
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha570,489,837 - 70,527,820 (-)NCBI
RefSeq Acc Id: XM_038526519   ⟹   XP_038382447
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha570,489,837 - 70,527,920 (-)NCBI
RefSeq Acc Id: XM_038538205   ⟹   XP_038394133
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0571,079,113 - 71,139,854 (-)NCBI
RefSeq Acc Id: XM_038538206   ⟹   XP_038394134
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0571,079,113 - 71,138,174 (-)NCBI
RefSeq Acc Id: XM_038538207   ⟹   XP_038394135
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0571,079,113 - 71,139,068 (-)NCBI
RefSeq Acc Id: XM_038538208   ⟹   XP_038394136
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0571,079,113 - 71,139,165 (-)NCBI
RefSeq Acc Id: XM_038602332   ⟹   XP_038458260
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0570,601,294 - 70,662,010 (-)NCBI
RefSeq Acc Id: XM_038602333   ⟹   XP_038458261
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0570,601,294 - 70,660,330 (-)NCBI
RefSeq Acc Id: XM_038602334   ⟹   XP_038458262
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0570,601,294 - 70,661,224 (-)NCBI
RefSeq Acc Id: XM_038602335   ⟹   XP_038458263
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0570,601,294 - 70,661,321 (-)NCBI
RefSeq Acc Id: XM_038666939   ⟹   XP_038522867
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0570,823,382 - 70,884,349 (-)NCBI
RefSeq Acc Id: XM_038666940   ⟹   XP_038522868
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0570,823,382 - 70,882,664 (-)NCBI
RefSeq Acc Id: XM_038666941   ⟹   XP_038522869
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0570,823,382 - 70,883,558 (-)NCBI
RefSeq Acc Id: XM_038666942   ⟹   XP_038522870
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0570,823,382 - 70,883,655 (-)NCBI
Ensembl Acc Id: ENSCAFP00000051378   ⟸   ENSCAFT00000063711
Ensembl Acc Id: ENSCAFP00000029633   ⟸   ENSCAFT00000031827
RefSeq Acc Id: XP_038332948   ⟸   XM_038477020
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038332950   ⟸   XM_038477022
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038332951   ⟸   XM_038477023
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038332949   ⟸   XM_038477021
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038458260   ⟸   XM_038602332
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038458263   ⟸   XM_038602335
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038458262   ⟸   XM_038602334
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038458261   ⟸   XM_038602333
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038522867   ⟸   XM_038666939
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JMU5 (UniProtKB/TrEMBL),   A0A8C0M004 (UniProtKB/TrEMBL),   A0A8I3PAG1 (UniProtKB/TrEMBL),   A0A8P0PAS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038522870   ⟸   XM_038666942
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LZZ2 (UniProtKB/TrEMBL),   A0A8I3NZI9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038522869   ⟸   XM_038666941
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LZZ2 (UniProtKB/TrEMBL),   A0A8I3NZI9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038522868   ⟸   XM_038666940
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PI15 (UniProtKB/TrEMBL),   A0A8C0LZZ2 (UniProtKB/TrEMBL),   A0A8I3NZI9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382436   ⟸   XM_038526508
- Peptide Label: isoform X4
- UniProtKB: A0A8P0PAS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382447   ⟸   XM_038526519
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038382445   ⟸   XM_038526517
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038382444   ⟸   XM_038526516
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038394133   ⟸   XM_038538205
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JMU5 (UniProtKB/TrEMBL),   A0A8C0M004 (UniProtKB/TrEMBL),   A0A8I3PAG1 (UniProtKB/TrEMBL),   A0A8P0PAS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038394136   ⟸   XM_038538208
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LZZ2 (UniProtKB/TrEMBL),   A0A8I3NZI9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038394135   ⟸   XM_038538207
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LZZ2 (UniProtKB/TrEMBL),   A0A8I3NZI9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038394134   ⟸   XM_038538206
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LZZ2 (UniProtKB/TrEMBL),   A0A8I3NZI9 (UniProtKB/TrEMBL),   A0A8I3PI15 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845027271   ⟸   ENSCAFT00845034818
Ensembl Acc Id: ENSCAFP00845027188   ⟸   ENSCAFT00845034718
Ensembl Acc Id: ENSCAFP00845027346   ⟸   ENSCAFT00845034917
Protein Domains
BACK   BTB

Promoters
RGD ID:13683413
Promoter ID:EPDNEW_C1481
Type:single initiation site
Name:GAN_1
Description:gigaxonin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1570,579,317 - 70,579,377EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019997 UniProtKB/TrEMBL
  ENSCAFG00000019999 Ensembl
  ENSCAFG00030001250 UniProtKB/TrEMBL
  ENSCAFG00040018397 UniProtKB/TrEMBL
  ENSCAFG00845019691 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000062253.2 UniProtKB/TrEMBL
  ENSCAFT00030002181.1 UniProtKB/TrEMBL
  ENSCAFT00030002195.1 UniProtKB/TrEMBL
  ENSCAFT00040033950.1 UniProtKB/TrEMBL
  ENSCAFT00845034718.1 UniProtKB/TrEMBL
  ENSCAFT00845034818 ENTREZGENE
  ENSCAFT00845034818.1 UniProtKB/TrEMBL
  ENSCAFT00845034917 ENTREZGENE
  ENSCAFT00845034917.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.420 UniProtKB/TrEMBL
  2.120.10.80 UniProtKB/TrEMBL
InterPro BACK UniProtKB/TrEMBL
  BTB-kelch_protein UniProtKB/TrEMBL
  BTB/POZ_dom UniProtKB/TrEMBL
  Kelch-typ_b-propeller UniProtKB/TrEMBL
  Kelch_1 UniProtKB/TrEMBL
  KLHL16 UniProtKB/TrEMBL
  KLHL16_BTB_POZ UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/TrEMBL
NCBI Gene GAN ENTREZGENE
PANTHER KELCH PROTEIN UniProtKB/TrEMBL
  PTHR24412:SF232 UniProtKB/TrEMBL
Pfam BACK UniProtKB/TrEMBL
  BTB UniProtKB/TrEMBL
  Kelch_1 UniProtKB/TrEMBL
PIRSF Kelch-like_protein_gigaxonin UniProtKB/TrEMBL
PROSITE BTB UniProtKB/TrEMBL
SMART BACK UniProtKB/TrEMBL
  BTB UniProtKB/TrEMBL
  Kelch UniProtKB/TrEMBL
Superfamily-SCOP SSF117281 UniProtKB/TrEMBL
  SSF54695 UniProtKB/TrEMBL
UniProt A0A8C0JMU5 ENTREZGENE
  A0A8C0LZZ2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0M004 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NZI9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PAG1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PI15 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PAS3 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:41105 ENTREZGENE