UBL3 (ubiquitin like 3) - Rat Genome Database

Name: UBL3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: UBL3 (ubiquitin like 3) Canis lupus familiaris

Analyze

Symbol:

UBL3

Name:

ubiquitin like 3

RGD ID:

12341023

Description:

ASSOCIATED WITH genetic disease (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ubiquitin-like protein 3

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	UBL3 (ubiquitin like 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ubl3 (ubiquitin-like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ubl3 (ubiquitin-like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ubl3 (ubiquitin like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	UBL3 (ubiquitin like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ubl3 (ubiquitin like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	UBL3 (ubiquitin like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	UBL3 (ubiquitin like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ubl3 (ubiquitin like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	10,100,524 - 10,169,042 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	9,982,021 - 10,166,750 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	10,145,022 - 10,213,974 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	10,213,367 - 10,282,343 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	10,095,255 - 10,282,334 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	10,107,839 - 10,176,782 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	10,115,261 - 10,184,204 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	10,157,090 - 10,226,057 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

membrane (IEA)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

UBL3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	10,100,524 - 10,169,042 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	9,982,021 - 10,166,750 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	10,145,022 - 10,213,974 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	10,213,367 - 10,282,343 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	10,095,255 - 10,282,334 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	10,107,839 - 10,176,782 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	10,115,261 - 10,184,204 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	10,157,090 - 10,226,057 (+)	NCBI		UU_Cfam_GSD_1.0

UBL3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	29,764,371 - 29,850,617 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	29,764,371 - 29,850,617 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	30,338,508 - 30,424,754 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	29,236,542 - 29,322,160 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	13	29,236,543 - 29,322,160	NCBI
Celera	13	11,408,157 - 11,494,450 (-)	NCBI		Celera
Cytogenetic Map	13	q12.3	NCBI
HuRef	13	11,152,796 - 11,238,892 (-)	NCBI		HuRef
CHM1_1	13	30,306,077 - 30,392,355 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	13	28,987,070 - 29,073,260 (-)	NCBI		T2T-CHM13v2.0

Ubl3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	148,441,441 - 148,489,689 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	148,441,445 - 148,489,599 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	148,504,631 - 148,552,879 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	148,504,635 - 148,552,789 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	149,316,207 - 149,364,364 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	148,814,996 - 148,862,982 (-)	NCBI		MGSCv36	mm8
Celera	5	146,505,918 - 146,554,062 (-)	NCBI		Celera
Cytogenetic Map	5	G3	NCBI
cM Map	5	88.66	NCBI

Ubl3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	11,509,912 - 11,554,548 (+)	NCBI		GRCr8
mRatBN7.2	12	6,473,684 - 6,518,331 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	6,473,460 - 6,518,862 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	7,159,191 - 7,204,106 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	7,782,324 - 7,827,239 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	6,810,332 - 6,855,256 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	7,865,938 - 7,911,526 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	7,865,938 - 7,911,525 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	9,953,322 - 9,997,648 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	7,019,485 - 7,063,818 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	7,049,412 - 7,093,745 (+)	NCBI
Celera	12	8,222,177 - 8,266,763 (+)	NCBI		Celera
Cytogenetic Map	12	p11	NCBI

Ubl3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	15,992,353 - 16,046,647 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	15,991,559 - 16,046,647 (+)	NCBI	ChiLan1.0	ChiLan1.0

UBL3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	29,351,149 - 29,437,420 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	20,457,885 - 20,544,192 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	11,044,601 - 11,130,825 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	29,082,854 - 29,169,035 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	29,082,851 - 29,169,061 (-)	Ensembl	panpan1.1		panPan2

Ubl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	171,244,403 - 171,304,268 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	24,647,887 - 24,707,758 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936472	24,647,763 - 24,707,752 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UBL3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	11	6,698,003 - 6,763,612 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	6,453,534 - 6,518,347 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

UBL3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	8,706,211 - 8,778,894 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	8,705,131 - 8,778,062 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666057	35,586,728 - 35,659,815 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ubl3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624776	8,594,333 - 8,664,899 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624776	8,561,188 - 8,662,943 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in UBL3
477 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5	5	22	6	6	6	6	6	12	8	10	6
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005635490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038434942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038434943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038458419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038509926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038509927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038573357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038573358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038637649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038637650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000010690 ⟹ ENSCAFP00000009911

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	25	9,982,021 - 10,165,880 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000047678 ⟹ ENSCAFP00000035954

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	25	10,100,587 - 10,166,750 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845039183 ⟹ ENSCAFP00845030688

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	25	10,095,255 - 10,279,181 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845039224 ⟹ ENSCAFP00845030722

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	25	10,213,054 - 10,282,334 (+)	Ensembl

RefSeq Acc Id:

XM_005635490 ⟹ XP_005635547

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	25	10,100,524 - 10,169,042 (+)	NCBI
Dog10K_Boxer_Tasha	25	10,145,022 - 10,213,974 (+)	NCBI

Sequence:

show sequence

GGCCAGGCCGCCGCTTGGGCTCTGAAATCACTTATTATTATTATTTTTTTCTTTTTTGGAAAGC
ACATCAAGATCGTCAAGCTCGATTGCTGTAGCTTGAAGACTTCTGCTCTGTTTTTGTTTGTTGT
TGTTTTTCCCCTGGTAAACATCTGGGTGTACATCAGACGGCAAGATGTCCAGTAATGTCCCGGC
AGATATGATAAATTTGCGCCTCATCTTGGTAAGCGGAAAAACAAAAGAGTTCCTGTTTTCTCCT
AATGATTCTGCTTCTGACATTGCAAAGCATGTGTATGACAATTGGCCAATGGACTGGGAAGAAG
AGCAGGTCAGCAGTCCAAATATTCTACGACTTATTTATCAAGGACGATTTCTACATGGAAATGT
CACATTAGGAGCATTAAAACTTCCTTTTGGCAAAACAACGGTGATGCATTTGGTGGCCAGAGAG
ACATTGCCAGAGCCAAACTCTCAAGGTCAGAGGAATCGCGAAAAGACTGGAGAGAGTAATTGTT
GTGTAATCCTGTAAACACTGTCTACTACGTGTACCGTGATGTAGTCTTTGTCTTTCATGCTGCT
GGAAAAGAAGAGACCCAACATTGCTTCAGAAACCCTTAGGAAGAGTCTGCCTGTAAATCCATGG
AACTGAATGATCTCATGAACACTGTCATTTTCTCTCATCAAAGTGAAAAGAACCAAGAACATTT
TTCACTACGATTTTTTATTTCTAGTATCTTTGTTTATGTTGAGCAGTTTTAAAATATATTGGTT
TTTGAATGCTATCCATCTCCGGGGGCAAAGTTAACAAGTTCTCTTTCCTAGCGGAAGCCATTTT
GCTGCCACAGAAATTTTCATCACCAGAACTAACAAATCAAGTGTTCCAAATATAGTTTGCACTA
AAAAAGATTGACATGATTTTCTTCATCAGCAAAATTTACAACCTGGTTTATGGCACCTAGAAAT
GCTCAGAAATACAATTCCATACTGGAACACACTCAGCAATTAATGAAGTTAATTAGTGGGCCGA
CTGGAGAGGGAGAACTGGAAAAGAAACTGAGCTGTTGGGTGAATTCTATCAGAGTCAGCCATGA
CGGCCACACTGGCACAGAATACAAAACTGAGTGTGACTCTTTTCACTGCAACAAATGAAAAAAA
CAAAATGTGCCTGTTGTTTAAAGCACTCAGTGGAGAGCTGATGAAACGAATTGCTTTTCCTTTC
ACACACGCACTCCTCAGTCATGCGGTCACCGAGTGCTTGTCCACACAGCACAAAAGGGGTGCGA
GTGCGCTTCCTAGCCTTAATGTGGGAGGTTCAATTCCATACTCATAGACTTGCATTGCCGCGCA
GAGATAATAGAAAACCTCATTTACTCATCAGTTTTATGTATTTGAACATCAGCAAATTGAATTT
TTCCATAATTATTGCTCATCTGTAACTGTGTCCAGTGTCACACTTACACATTAGCATTCAGGTG
AATTCTTTAAATTAAAAATAATTCTCCACAGTAACTAATTTTGTTTCTTTATGTAGTTTGCATT
TGGTATTAGTGCTTGCAATTGTATTAAAATCAAAAGCTGACTTTTAGGGCATACTACATGATGA
AGGATGCCATTCTTTTGTTTTTTACCAATAATTTAAAAATTGATATGCTAAAACAATTTGCACA
GCACTAAAGCATGAGCTAGTTTCATCTAAACCTGTACAAATATAAAAGATTTTATATTTTTTCG
CTGGGAAGAAATTCTTCCTGGATGAAATTACAAATATGTGTAGAATATATTTAATAAAAAACTT
ATAAAATACCTAACTATAGAACTTAAATATAGATTGGCGTGTAGTATATAGAACAATATTCCAT
ATAAATAACTTTAGCCTTTATAAAAATGAAGTTGCAGGCTGACATTATGTTCTGTACTTAAATA
AGTGTCCATGGCCCTTAAAAACATCTAAGTGTAAATGGTTTCAAATGGTCAACTTTGTCTAAAG
TTAATCAGGTTATTTTATTCATTGTCGATGCTTTGATGAAAAGGCTTTATATGCAGTAGATCTA
CGAAAATATTGTTCATACTGATCAGACTTAAATTTGTATAGAGCAGAGTTTTAAAACGAATGTA
AATAGCACTAAACATTTTCTTTCTGCAACCTGTACTTAATAGATTCTTTCTGTAAACTAAAGAG
AAAAAAATATCAGTGCATTTCAGTGGTAATTTTAAAGGTCTTGATTAAGTCGATTATTGTTTAA
GCACCGTCTCAGCCATGTTAAAATTGTTTTCTACTTTTATTTCTGAATCTTTAAGAGATTTGTT
TAATATTCTGTTGTTAGTTTCAGGAGTATTCACGATGTATCTTTGATATTTAACCTGGTTAATT
TGTGCACAGAGCAACAATGGATAGCATTATGCAGTCTCTGTTATCACTAAAATGTTGTATTCAG
ATGTTAAATATTTATATGCTTTGTTGACTAGCTTAAATGTGAATTCTGTTAGTGTTGACTAAAG
AGGAATCTGATAGTTACTTAATTGGGCAATTATGCCATTTATTTCTCTCTTCTTCTTTTGTAAA
ACTACTGGTAATTATTTTTAATACCTATTTTAATTCTAATTCCTCTTCTGTTTTTCCAAAGTTA
AAGACTATCAGTTAATTTAGATTGAATTTTTATGATGGTTTAAAAAAATAATTCTCTATTGGTT
TTCAATATATTTTTCTGTGTGTTCCCATGTTATAAATTTCCCTTTTACAAGACCACAATCTAAA
GTTTGCAAAATGGGTGAACTGGTTCATTCATAGAGAAAGAATTATGTCACTTAATTCCTGATAA
CATTGTTGTGCAAAATGAAAAAAAATTTAAAATAGCAGTAAAATTATATACTGAAAACACCAAA
AATTTAGATGCCTTAATAGTATATCCATGAAAATACTCAACTGTCCCTTTGGAAATAGTTTCTT
GGACTGCCTGATGTCTGAAATATGATTAATCATATCCAAGGCTACCACTGAAGATCCCTCTGCC
AAAAATAACAGCTCATTTACCAAGAGGTAAAGGCTGCATAGATCCAGTCATGTAAATAAAGCCT
GAATTATGGGCCTGGGATACCTGCCCAGTGCTTGCTATCTAACTCACCTCTTTTACCTAAATTA
TCCTAGACTTTGTTAAGTGTTCCGGACAAGGCAAAGCTTTTCTTCTTTATTAAAACCTCAGCAT
GTCTCCTTGATCTGAATTATTTGCTTTCTGTTCAAGATAGGTTGTATCTTATCCTATCATGAAA
AATAGAGTATCTAACATCGTCAGTCACATTAAATGAGGTTTTCTCATAACATACATTTATCCTT
AGTTATGTGTCATCTTGACCAATGTTGCAGTAATTTCTGTTAGCTGATTGTGGTAAACAATGTT
TAATGTGAAAAGAAATTAAAACTTTCTTCATCTGTTGTAGAATA

hide sequence

RefSeq Acc Id:

XM_038434942 ⟹ XP_038290870

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	25	10,213,367 - 10,282,343 (+)	NCBI

RefSeq Acc Id:

XM_038434943 ⟹ XP_038290871

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	25	10,257,785 - 10,282,343 (+)	NCBI

RefSeq Acc Id:

XM_038458419 ⟹ XP_038314347

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	25	10,189,416 - 10,213,974 (+)	NCBI

RefSeq Acc Id:

XM_038509926 ⟹ XP_038365854

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	25	10,107,839 - 10,176,782 (+)	NCBI

RefSeq Acc Id:

XM_038509927 ⟹ XP_038365855

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	25	10,152,228 - 10,176,782 (+)	NCBI

RefSeq Acc Id:

XM_038573357 ⟹ XP_038429285

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	25	10,157,090 - 10,226,057 (+)	NCBI

RefSeq Acc Id:

XM_038573358 ⟹ XP_038429286

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	25	10,201,498 - 10,226,057 (+)	NCBI

RefSeq Acc Id:

XM_038637649 ⟹ XP_038493577

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	25	10,115,261 - 10,184,204 (+)	NCBI

RefSeq Acc Id:

XM_038637650 ⟹ XP_038493578

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	25	10,159,644 - 10,184,204 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005635547	(Get FASTA)	NCBI Sequence Viewer
	XP_038290870	(Get FASTA)	NCBI Sequence Viewer
	XP_038290871	(Get FASTA)	NCBI Sequence Viewer
	XP_038314347	(Get FASTA)	NCBI Sequence Viewer
	XP_038365854	(Get FASTA)	NCBI Sequence Viewer
	XP_038365855	(Get FASTA)	NCBI Sequence Viewer
	XP_038429285	(Get FASTA)	NCBI Sequence Viewer
	XP_038429286	(Get FASTA)	NCBI Sequence Viewer
	XP_038493577	(Get FASTA)	NCBI Sequence Viewer
	XP_038493578	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000009911.4
	ENSCAFP00000074805.1
	ENSCAFP00030035379.1
	ENSCAFP00040027553.1
	ENSCAFP00845030688.1
	ENSCAFP00845030722
	ENSCAFP00845030722.1

RefSeq Acc Id:	XP_005635547 ⟸ XM_005635490
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PE62 (UniProtKB/TrEMBL), A0A8C0R7J7 (UniProtKB/TrEMBL), A0A8I3PJ86 (UniProtKB/TrEMBL), A0A8C0Z0H3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQG RFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL hide sequence

RefSeq Acc Id:

ENSCAFP00000009911 ⟸ ENSCAFT00000010690

RefSeq Acc Id:

ENSCAFP00000035954 ⟸ ENSCAFT00000047678

RefSeq Acc Id:	XP_038365854 ⟸ XM_038509926
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038365855 ⟸ XM_038509927
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038493577 ⟸ XM_038637649
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038493578 ⟸ XM_038637650
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038290870 ⟸ XM_038434942
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PE62 (UniProtKB/TrEMBL), A0A8C0R7J7 (UniProtKB/TrEMBL), A0A8I3PJ86 (UniProtKB/TrEMBL), A0A8C0Z0H3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038290871 ⟸ XM_038434943
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0Z0H3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038314347 ⟸ XM_038458419
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0Z0H3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038429285 ⟸ XM_038573357
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PE62 (UniProtKB/TrEMBL), A0A8C0R7J7 (UniProtKB/TrEMBL), A0A8C0Z0H3 (UniProtKB/TrEMBL), A0A8I3PJ86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038429286 ⟸ XM_038573358
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0Z0H3 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845030688 ⟸ ENSCAFT00845039183

RefSeq Acc Id:

ENSCAFP00845030722 ⟸ ENSCAFT00845039224

Protein Domains

Ubiquitin-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000032748	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030022077	UniProtKB/TrEMBL
	ENSCAFG00040017109	UniProtKB/TrEMBL
	ENSCAFG00845022214	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000010690.5	UniProtKB/TrEMBL
	ENSCAFT00000105662.1	UniProtKB/TrEMBL
	ENSCAFT00030040529.1	UniProtKB/TrEMBL
	ENSCAFT00040031691.1	UniProtKB/TrEMBL
	ENSCAFT00845039183.1	UniProtKB/TrEMBL
	ENSCAFT00845039224	ENTREZGENE
	ENSCAFT00845039224.1	UniProtKB/TrEMBL
InterPro	MUB	UniProtKB/TrEMBL
	Ubiquitin-like_dom	UniProtKB/TrEMBL
	Ubiquitin-like_domsf	UniProtKB/TrEMBL
	UBL3-like	UniProtKB/TrEMBL
	UBL3-like_ubiquitin_dom	UniProtKB/TrEMBL
	UBL3_Ubl_met	UniProtKB/TrEMBL
KEGG Report	cfa:607436	UniProtKB/TrEMBL
NCBI Gene	UBL3	ENTREZGENE
PANTHER	PTHR13169	UniProtKB/TrEMBL
	UBIQUITIN-LIKE PROTEIN 3	UniProtKB/TrEMBL
Pfam	Rad60-SLD_2	UniProtKB/TrEMBL
PIRSF	MUB	UniProtKB/TrEMBL
PROSITE	UBIQUITIN_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54236	UniProtKB/TrEMBL
UniProt	A0A8C0PE62	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R7J7	ENTREZGENE
	A0A8C0Z0H3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PJ86	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PQE1_CANLF	UniProtKB/TrEMBL
	A0A8P0N919_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:48076	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar