Gene: POFUT1 (protein O-fucosyltransferase 1) Canis lupus familiaris
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Symbol:
POFUT1
Name:
protein O-fucosyltransferase 1
RGD ID:
12285354
Description:
ENCODES a protein that exhibits fucosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); heart development (ortholog); nervous system development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Dowling-Degos disease (ortholog); Dowling-Degos Disease 2 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (inferred); membrane (inferred)
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
GDP-fucose protein O-fucosyltransferase 1
RGD Orthologs
Alliance Orthologs
More Info
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More Info
Species
Gene symbol and name
Data Source
Assertion derived from
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Orthologs 1
Homo sapiens (human):
POFUT1 (protein O-fucosyltransferase 1)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Pofut1 (protein O-fucosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):
Pofut1 (protein O-fucosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Pofut1 (protein O-fucosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
POFUT1 (protein O-fucosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Pofut1 (protein O-fucosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
POFUT1 (protein O-fucosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
POFUT1 (protein O-fucosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Pofut1 (protein O-fucosyltransferase 1)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Latest Assembly:
CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 24 21,608,905 - 21,636,084 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 24 21,608,899 - 21,632,979 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 24 21,255,008 - 21,280,646 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 24 22,295,373 - 22,325,022 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 24 22,295,367 - 22,325,465 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 24 21,573,904 - 21,599,988 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 24 21,679,257 - 21,705,352 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 24 22,110,055 - 22,136,141 (+) NCBI UU_Cfam_GSD_1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Disease Annotations - ClinVar
Imported Disease Annotations - CTD
Imported Disease Annotations - OMIM
References
Additional References at PubMed
Genomics
Comparative Map Data
POFUT1 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 24 21,608,905 - 21,636,084 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 24 21,608,899 - 21,632,979 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 24 21,255,008 - 21,280,646 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 24 22,295,373 - 22,325,022 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 24 22,295,367 - 22,325,465 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 24 21,573,904 - 21,599,988 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 24 21,679,257 - 21,705,352 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 24 22,110,055 - 22,136,141 (+) NCBI UU_Cfam_GSD_1.0
POFUT1 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 20 32,207,880 - 32,238,658 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 20 32,207,855 - 32,238,658 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 20 30,795,683 - 30,826,461 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 20 30,259,357 - 30,290,128 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 20 30,259,356 - 30,269,386 NCBI Celera 20 27,552,048 - 27,582,816 (+) NCBI Celera Cytogenetic Map 20 q11.21 NCBI HuRef 20 27,584,207 - 27,614,126 (+) NCBI HuRef CHM1_1 20 30,699,542 - 30,730,309 (+) NCBI CHM1_1 T2T-CHM13v2.0 20 33,931,803 - 33,962,575 (+) NCBI T2T-CHM13v2.0
Pofut1 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 2 153,083,435 - 153,114,862 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 2 153,083,453 - 153,112,167 (+) Ensembl GRCm39 Ensembl GRCm38 2 153,241,532 - 153,271,029 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 2 153,241,533 - 153,270,247 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 2 153,067,268 - 153,095,989 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 2 152,932,973 - 152,961,694 (+) NCBI MGSCv36 mm8 Celera 2 159,069,104 - 159,097,829 (+) NCBI Celera Cytogenetic Map 2 H1 NCBI cM Map 2 75.41 NCBI
Pofut1 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 162,168,855 - 162,195,798 (+) NCBI GRCr8 mRatBN7.2 3 141,708,618 - 141,735,558 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 141,708,644 - 141,734,786 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 145,613,393 - 145,633,308 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 154,197,190 - 154,217,106 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 151,936,320 - 151,958,399 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 148,722,864 - 148,749,743 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 148,722,955 - 148,747,208 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 155,347,854 - 155,374,715 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 143,592,269 - 143,614,466 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 3 143,497,890 - 143,520,088 (+) NCBI Celera 3 140,454,947 - 140,477,055 (+) NCBI Celera Cytogenetic Map 3 q41 NCBI
Pofut1 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955422 28,809,901 - 28,833,186 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955422 28,809,901 - 28,833,186 (-) NCBI ChiLan1.0 ChiLan1.0
POFUT1 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 21 37,900,199 - 37,931,013 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 20 37,893,296 - 37,924,248 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 20 28,496,987 - 28,527,817 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 20 29,625,481 - 29,655,722 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 20 29,625,481 - 29,655,722 (+) Ensembl panpan1.1 panPan2
Pofut1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024408640 170,680,317 - 170,706,325 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936485 19,111,675 - 19,137,611 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936485 19,111,704 - 19,137,689 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
POFUT1 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 17 35,856,575 - 35,882,964 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 17 35,856,557 - 35,883,918 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 17 40,857,249 - 40,880,949 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
POFUT1 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 2 36,590,905 - 36,622,788 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 2 36,591,038 - 36,622,568 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666050 90,291,033 - 90,322,472 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Pofut1 (Heterocephalus glaber - naked mole-rat)
.
Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
6
5
5
23
22
16
6
6
6
6
33
22
12
14
10
Too many to show, limit is 500. Download them if you would like to view them all.
Sequence
Ensembl Acc Id:
ENSCAFT00000011540 ⟹ ENSCAFP00000010693
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 24 21,608,899 - 21,632,979 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00000072807 ⟹ ENSCAFP00000048684
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 24 21,608,899 - 21,618,268 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00845036817 ⟹ ENSCAFP00845028826
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 24 22,295,367 - 22,325,465 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00845036878 ⟹ ENSCAFP00845028873
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 24 22,295,367 - 22,304,737 (+) Ensembl
RefSeq Acc Id:
NM_001077357 ⟹ NP_001070825
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 24 21,608,905 - 21,632,857 (+) NCBI Dog10K_Boxer_Tasha 24 21,255,008 - 21,280,646 (+) NCBI ROS_Cfam_1.0 24 22,295,373 - 22,321,482 (+) NCBI UMICH_Zoey_3.1 24 21,573,904 - 21,599,988 (+) NCBI UNSW_CanFamBas_1.0 24 21,679,257 - 21,705,352 (+) NCBI UU_Cfam_GSD_1.0 24 22,110,055 - 22,136,141 (+) NCBI
Sequence:
ATGGGCGCCGCCGCGTGGGCTTCGTCGCCCCTGCCGCTGCGTGTGTCTCTCCTGCTGCTGAGTCTGCCGCTCCCGGGGCTGCCCGTGGGCTCCTGGGACCCGGCCGGTTACCTGCTCTACTGCCCATG CATGGGGCGCTTCGGGAACCAGGCTGATCACTTCTTGGGCTCCCTGGCTTTTGCAAAGCTGTTGAACCGCACCTTGGCTGTACCCCCTTGGATCGAGTACCAGCATCACAGGCCTCCCTTCACCAATC TCCATGTGTCCTACCATAAGTACTTCAAGCTGGAGCCCCTCCAGGCCTACCATCGGGTTATCAGCCTAGAGGACTTCATGGAGAAGCTGGCACCCACTCACTGGCCCCCCGAGAGGCGAGTGGCATAC TGCTTTGAAGTGGCAGCCCAGCGAAGCCCTGATAAGAAGACATGCCCCATGAAGGAAGGAAATCCCTTTGGCCCATTTTGGGATCAGTTTCATGTGAGTTTCAACAAGTCCAAGCTTTTTTCACGCAT TTCCTTCAGTGCCTCCTACAAAGACCAATGGATTCAGAGATTGTCTCCAAAGGAACATCCAGTGCTGGCCCTGCCGGGAGCCCCCGCCCAGTTCCCCGTCCTGGAGGAGCACAGACCACTCCAGAAGT ATGTGGTATGGTCAGATGAGATGGTGAGGACGGGAGAGGCCCACATTCTCACCCACCTCATCCGGCCGTACGTGGGCATTCACCTGCGCATTGGCTCTGACTGGAAGAACGCCTGTGCCATGCTGAAG GACGGGACTGCAGGCTCCCACTTCATGGCCTCCCCACAGTGTGTGGGCTACAGCCGCAGTACGGCGGCCCCCCTCACCATGACTATGTGCCTCCCCGACCTGAAGGAAATCAGACGGGCCGTGAAGCT CTGGGTGGAAGCACTGAATGCCCAGTCGGTCTACATCGCCACGGATTCCGAGAGTTATGTGCCTGAGATCCAAGAGCTCTTCAAAGGGAAGGTGAAGGTGGTGAGCCTGAAGCCTGATGTGGCCCAGA TCGACCTGTACATCCTTGGCCAAGCTGACCACTTTATTGGCAACTGTGTCTCCTCCTTTACTGCCTTTGTGAAGCGGGAACGGGACCTCCAGGGAAGGTTGTCCTCTTTCTTCGGCATGGACAAACCC CCTCAGCTGCGGGATGAGTTCTGA
hide sequence
RefSeq Acc Id:
XM_038432840 ⟹ XP_038288768
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 24 22,296,540 - 22,325,022 (+) NCBI
RefSeq Acc Id:
NP_001070825 ⟸ NM_001077357
- Peptide Label:
precursor
- UniProtKB:
Q00P48 (UniProtKB/TrEMBL), A0A8P0SCM8 (UniProtKB/TrEMBL)
- Sequence:
MGAAAWASSPLPLRVSLLLLSLPLPGLPVGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHRPPFTNLHVSYHKYFKLEPLQAYHRVISLEDFMEKLAPTHWPPERRVAY CFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSKLFSRISFSASYKDQWIQRLSPKEHPVLALPGAPAQFPVLEEHRPLQKYVVWSDEMVRTGEAHILTHLIRPYVGIHLRIGSDWKNACAMLK DGTAGSHFMASPQCVGYSRSTAAPLTMTMCLPDLKEIRRAVKLWVEALNAQSVYIATDSESYVPEIQELFKGKVKVVSLKPDVAQIDLYILGQADHFIGNCVSSFTAFVKRERDLQGRLSSFFGMDKP PQLRDEF
hide sequence
Ensembl Acc Id:
ENSCAFP00000010693 ⟸ ENSCAFT00000011540
Ensembl Acc Id:
ENSCAFP00000048684 ⟸ ENSCAFT00000072807
RefSeq Acc Id:
XP_038288768 ⟸ XM_038432840
- Peptide Label:
isoform X1
- UniProtKB:
A0A8P0SCM8 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSCAFP00845028826 ⟸ ENSCAFT00845036817
Ensembl Acc Id:
ENSCAFP00845028873 ⟸ ENSCAFT00845036878
Promoters
RGD ID: 13687564
Promoter ID: EPDNEW_C5634
Type: initiation region
Name: POFUT1_1
Description: protein O-fucosyltransferase 1
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Dog Assembly Chr Position (strand) Source CanFam3.1 24 21,608,856 - 21,608,916 EPDNEW
Additional Information