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Gene: POFUT1 (protein O-fucosyltransferase 1) Sus scrofa

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Symbol:

POFUT1

Name:

protein O-fucosyltransferase 1

RGD ID:

14049039

Description:

ENCODES a protein that exhibits fucosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); heart development (ortholog); nervous system development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Dowling-Degos disease (ortholog); Dowling-Degos Disease 2 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

GDP-fucose protein O-fucosyltransferase 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	35,856,575 - 35,882,964 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	35,856,557 - 35,883,918 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	40,857,249 - 40,880,949 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Dowling-Degos disease (ISO)

Dowling-Degos Disease 2 (ISO)

genetic disease (ISO)

immunodeficiency-centromeric instability-facial anomalies syndrome 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

angiogenesis (IEA,ISO)

fucose metabolic process (IEA)

heart development (IEA,ISO)

nervous system development (IEA,ISO)

Notch signaling pathway (IEA,ISO)

protein glycosylation (IEA)

protein O-linked fucosylation (IBA,IEA)

protein O-linked glycosylation (IEA,ISS)

regulation of Notch signaling pathway (IBA,IEA)

somitogenesis (IEA,ISO)

Cellular Component

endoplasmic reticulum (IBA,IEA)

membrane (IEA)

Molecular Function

fucosyltransferase activity (IEA,ISS)

glycosyltransferase activity (IEA)

peptide-O-fucosyltransferase activity (IBA,IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

Notch signaling pathway (ISO)

References

Additional References at PubMed

PMID:12966037	PMID:14681463	PMID:16679357	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

POFUT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	35,856,575 - 35,882,964 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	35,856,557 - 35,883,918 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	40,857,249 - 40,880,949 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

POFUT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	32,207,880 - 32,238,658 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	32,207,855 - 32,238,658 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	30,795,683 - 30,826,461 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	30,259,357 - 30,290,128 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	30,259,356 - 30,269,386	NCBI
Celera	20	27,552,048 - 27,582,816 (+)	NCBI		Celera
Cytogenetic Map	20	q11.21	NCBI
HuRef	20	27,584,207 - 27,614,126 (+)	NCBI		HuRef
CHM1_1	20	30,699,542 - 30,730,309 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	33,931,803 - 33,962,575 (+)	NCBI		T2T-CHM13v2.0

Pofut1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	153,083,435 - 153,114,862 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	153,083,453 - 153,112,167 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	153,241,532 - 153,271,029 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	153,241,533 - 153,270,247 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	153,067,268 - 153,095,989 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	152,932,973 - 152,961,694 (+)	NCBI		MGSCv36	mm8
Celera	2	159,069,104 - 159,097,829 (+)	NCBI		Celera
Cytogenetic Map	2	H1	NCBI
cM Map	2	75.41	NCBI

Pofut1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	162,168,855 - 162,195,798 (+)	NCBI		GRCr8
mRatBN7.2	3	141,708,618 - 141,735,558 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	141,708,644 - 141,734,786 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	145,613,393 - 145,633,308 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	154,197,190 - 154,217,106 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	151,936,320 - 151,958,399 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	148,722,864 - 148,749,743 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	148,722,955 - 148,747,208 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	155,347,854 - 155,374,715 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	143,592,269 - 143,614,466 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	143,497,890 - 143,520,088 (+)	NCBI
Celera	3	140,454,947 - 140,477,055 (+)	NCBI		Celera
Cytogenetic Map	3	q41	NCBI

Pofut1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	28,809,901 - 28,833,186 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	28,809,901 - 28,833,186 (-)	NCBI	ChiLan1.0	ChiLan1.0

POFUT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	37,900,199 - 37,931,013 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	37,893,296 - 37,924,248 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	28,496,987 - 28,527,817 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	29,625,481 - 29,655,722 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	29,625,481 - 29,655,722 (+)	Ensembl	panpan1.1		panPan2

POFUT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	21,608,905 - 21,636,084 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	21,608,899 - 21,632,979 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	21,255,008 - 21,280,646 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	22,295,373 - 22,325,022 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	22,295,367 - 22,325,465 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	21,573,904 - 21,599,988 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	21,679,257 - 21,705,352 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	22,110,055 - 22,136,141 (+)	NCBI		UU_Cfam_GSD_1.0

Pofut1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	170,680,317 - 170,706,325 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936485	19,111,675 - 19,137,611 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936485	19,111,704 - 19,137,689 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POFUT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	36,590,905 - 36,622,788 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	36,591,038 - 36,622,568 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	90,291,033 - 90,322,472 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pofut1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	337,148 - 364,301 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624741	338,028 - 364,414 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in POFUT1
496 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001129952	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021077305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021077306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ567917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK235941	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK236627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK350219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK391173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU928633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ139939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01075790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000007925 ⟹ ENSSSCP00000007712

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	17	35,856,575 - 35,882,964 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000025995 ⟹ ENSSSCP00000026371

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	17	35,856,575 - 35,882,964 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000052169 ⟹ ENSSSCP00000039590

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	17	35,856,575 - 35,882,964 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000070479 ⟹ ENSSSCP00000068223

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	17	35,856,575 - 35,864,708 (+)	Ensembl

RefSeq Acc Id:

NM_001129952 ⟹ NP_001123424

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	35,856,668 - 35,880,367 (+)	NCBI

Sequence:

show sequence

ATGGGCGCCGCCGCGTGGGCATCGTCGCCCCTGCCGCCACTTGTGTCTCTCCTGCTGCTACTTC
TGCCGCTCCCGGGGCTGCCTGCGGTCTCCTGGGACCCGGCCGGTTATCTGCTCTACTGCCCATG
CATGGGGCGCTTTGGGAACCAGGCTGATCATTTCTTGGGCTCCCTGGCATTTGCAAAGCTGTTG
AACCGCACCCTGGCTGTACCTCCTTGGATTGAGTACCAGCATCACAAGCCTCCTTTCACCAATC
TCCATGTGTCCTACCAAAAGTACTTCAAGCTGGAGCCCCTCCAGGTCTACCACCGGGTCATCAG
CCTGGAGGACTTCATGGAGAAGCTGGCACCCACCCACTGGCCCCCTGAGAGGCGGGTGGCATAC
TGTTTTGAGGTGGCAGCACAGCGAAGCCCAGATAAGAAGACATGCCCCATGAAGGAAGGAAACC
CCTTTGGCCCATTTTGGGATCAGTTTCATGTGAGTTTCAACAAGTCAGAACTTTTTGCAGGCAT
TTCCTTCAGTGCCTCCTACAAAGACCAGTGGATCCAAAGATTTTCTCCAAAGGAACATCCAGTG
CTTGCCCTGCCAGGGGCCCCGGCTCAGTTCCCCGTCCTGGAGGAACATAGGCCACTTCAGAAAT
ACATGGTGTGGTCAGACGAGATGGTGAGGACAGGGGAGGCCCAGATCCGTGCCCACCTCATCCG
GCCCTACGTGGGCATTCACCTGCGCATTGGCTCTGACTGGAAGAACGCGTGCGCCATGCTGAAG
GACGGCACTGCCGGCGCTCACTTCATGGCCTCCCCGCAGTGCGTGGGTTACAGCCGCCACACCG
CCGCCCCGCTCACCATGACCATGTGCCTCCCCGACCTGAAGGAGATCAGGCGCGCCCTGAAGCT
CTGGGTGACGGCGCTGAGCGCCCAGTCCGTCTACATCGCCACGGACTCTGAGAGTTACCTGCCG
GAGATCCAGCAGCTCTTCAAAGGAAAGGTGAAGGTGGTGAGTCTGAAACCTGAGGTGGCCCAGA
TCGACCTGTACATCCTTGGCCAGGCTGACCACTTTATTGGCAACTGTGTATCCTCCTTCACTGC
CTTCGTGAAGCGGGAACGGGATCTCCAGGGGAGGCTGTCCTCCTTCTTCGGCATGGACAGGCCT
CCTCAGCTGCGAGACGAGTTCTGA

hide sequence

RefSeq Acc Id:

XM_021077305 ⟹ XP_020932964

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	35,856,557 - 35,883,918 (+)	NCBI

Sequence:

show sequence

CGGGGCGGTGCGCGGGCGGCGCGCGCAGACCGCCGGGAGCGGGGCGGACGCTCGCGCCCCTCCT
TCACTCCCCGCCTCCGCGCCGTTGCGTGCTCGGGCTCCGGAGCAGATATGGGCGCCGCCGCGTG
GGCATCGTCGCCCCTGCCGCCACTTGTGTCTCTCCTGCTGCTACTTCTGCCGCTCCCGGGGCTG
CCTGCGGTCTCCTGGGACCCGGCCGGTTATCTGCTCTACTGCCCATGCATGGGGCGCTTTGGGA
ACCAGGCTGATCATTTCTTGGGCTCCCTGGCATTTGCAAAGCTGTTGAACCGCACCCTGGCTGT
ACCTCCTTGGATTGAGTACCAGCATCACAAGCCTCCTTTCACCAATCTCCATGTGTCCTACCAA
AAGTACTTCAAGCTGGAGCCCCTCCAGGTCTACCACCGGGTCATCAGCCTGGAGGACTTCATGG
AGAAGCTGGCACCCACCCACTGGCCCCCTGAGAGGCGGGTGGCATACTGTTTTGAGGTGGCAGC
ACAGCGAAGCCCAGATAAGAAGACATGCCCCATGAAGGAAGGAAACCCCTTTGGCCCATTTTGG
GATCAGTTTCATGTGAGTTTCAACAAGTCAGAACTTTTTGCAGGCATTTCCTTCAGTGCCTCCT
ACAAAGACCAGTGGATCCAAAGGTCTGTGGCACAAGTGCTATTGTCATGTGTGCTTTGCAGATT
TTCTCCAAAGGAACATCCAGTGCTTGCCCTGCCAGGGGCCCCGGCTCAGTTCCCCGTCCTGGAG
GAACATAGGCCACTTCAGAAATACATGGTGTGGTCAGACGAGATGGTGAGGACAGGGGAGGCCC
AGATCCGTGCCCACCTCATCCGGCCCTACGTGGGCATTCACCTGCGCATTGGCTCTGACTGGAA
GAACGCGTGCGCCATGCTGAAGGACGGCACTGCCGGCGCTCACTTCATGGCCTCCCCGCAGTGC
GTGGGTTACAGCCGCCACACCGCCGCCCCGCTCACCATGACCATGTGCCTCCCCGACCTGAAGG
AGATCAGGCGCGCCCTGAAGCTCTGGGTGACGGCGCTGAGCGCCCAGTCCGTCTACATCGCCAC
GGACTCTGAGAGTTACCTGCCGGAGATCCAGCAGCTCTTCAAAGGAAAGGTGAAGGTGGTGAGT
CTGAAACCTGAGGTGGCCCAGATCGACCTGTACATCCTTGGCCAGGCTGACCACTTTATTGGCA
ACTGTGTATCCTCCTTCACTGCCTTCGTGAAGCGGGAACGGGATCTCCAGGGGAGGCTGTCCTC
CTTCTTCGGCATGGACAGGCCTCCTCAGCTGCGAGACGAGTTCTGATCCTGGCTAGAGCAGGCC
ACCTGTCTGAGCTGTTCCCTCCAGCCAGGTCTGGCAGCCAGAAGTGCTGCCAGGATTGCTCCGC
AAAGATCAGAGAACAGAGGAACATACCAGGGACTTCCTGAAGGAGGAAGGCAGTCCGTTTCCCA
GGGCACAGGACTTCCAAGCTTCTCGTAGCCAGACCATCTACCTTCCTCATGTGCTCCCTGCTAC
TTCTCCTGGGAATTTCTTATACCAGCAAAACAGTCCAAGCTTTGTTTTTTGGTCTGCCCTGCTC
TGAATAGCTTGGGATGCTAAACTCTCTTCAGAGAGAGTTTTTATATATATATTTATATAGAGAG
ATTTTTATAGTTTTGATACAAGGTCATGACTCCCCTAGAATTTCCCTTATTTTAAAAAATCAGC
AAAGTTCAGGAGTTCCCTGGTGGCCTAGCAGCTAAGGATCCAGCACTGTCACTGCTATGGCTCG
GGTCACTGCTGTGATGTGGGTTTGATCCCTGGCCCAGGAACTTCCACAAGCCACAGGCTCTGCC
AAAAAAAAAAAAAAAAAAAATCAGTGAAGTTCATTAACACAGGTTCCTAAAGTGACCTTAATGG
AATGTGGATAAGGCCAGATGTGGGTGAGTATATTGAATGCTTTTCCAGATGACCCCCAAAGTGG
CCCTTGGTCTTACATCCGCTGCCTGGCGGGAGCCACTATCAACCGTCTCTTCCTAGACCATTTC
CAGGGTTTGGGACAGGAGCACTGTCCTCCATTGTAAATGCTATGCAAATAGAACTTAGCTATCA
CTGTCAGTACTGCTCACACGGCAATCCCTGGCGAGGAGCGCAAAACCCATCATGATCTTCTTCT
CAGAGTCTCTTGGCTCCCACAAACCTGGCACCATCAGGGTCTTGTAACACATCACCAGGACCAA
GCTTGGCCTGGCGGGATCCTTCTGAAATTTCCTGACCTCCTGTCCCAGGCGGCCTGGGTGTACA
ATTTTGCCATTGAGCTGGTATCCAAGCTGTCCTCCCAGCCCTCCTCCTGCAGTGGAAGCCCGCA
GCCGATATTCTTACAATGGAGTGTTTGCTAAGCCGCTGACCAGGCAGAAGATGCTCGGTGCCCA
GGAGCCATCAGACCCCCAGATTCCCCCATCCTGTGTAATCAGGCTTAAGGTGTTATAGTCCTAA
GTTTCTTTGTCTCTCAGATGCTGTAGTTGTAAAATCCCTGACTCCTGAGAGTCTGATTTTTTGG
CCTTGTGGTTCCAAAATTCATGTCTAATACCTGCTGATCTCTTCCTTGCCACATGGCCTCCCTC
AGCCTTCAAACCTGGGAAGGTGGAGGAGACTGGTGAGAGCCAGGCCCAGAGCTCCCTGCAGCAG
TGTCCCTTGGGTTATCTTTAGAAAGAAAAAAATTTTTTTCAGGGCAGACTGAGTCAGAGGCTGC
AGGGCAGTGAGGGTCTCAAACCCTATTGGTGCATTTGCTGTTTAGAGCTGCTTCCCAACTCAGT
GGGAGAAACTATACAGAAAGGGCATTTGTGTTTACCCTCTGCGGAAAATGTTTCAAATCCTGAG
TCCTGAGAGGTGGTTTATCTGTTCAGACTTGTTCACAAGCCTCACTGAGAGACCTGGGAGCAGG
CATGCCCCTGTCTTGATCGGTGGTTGGGAAAGTGTGGCCGTTCAGCTGATCTGGGTTTGTTTGC
AGCCTCACACTAGGTACTCGTGTTAGAGCCTGGGGCTCTGAGGGGACATCCAGAACATCTTGAT
GAACATCGGCCATTGTCACAGCTTGTGTTTCTGGAGGCGAGGGTGCTGGAGTTGTGGTCAGACT
TGGTGTGTTCTGTAGGTGAGCACTTTATTCCTCTTTAACCCAGTTTCCTCACCTATAAAATGGT
GATAAAACAGACAGGGCTGCTGAATGGTGCCAATCAGATAAAGCATGTATATAAGAGCACATTG
TAAACTTGAACGAGACAAAGGCACGTATGTGGCTGTTGATTAATTTGACTGCCTCTTGTACGTC
TCCTCTGTGCTTGCTGAGTGCTTTGTGGACATTCTCTGGTTTAGCCCCTCCACTCAGCCCCCGG
AAGTAGGAACTTACTCTTTCTGCATAAGACAAAATTAAGGCTGAGCAAAATTCCCATAGTTTGT
CCAAGGCTGCACAGCTGGTGGTGGGAAGCCAGGATTTCACCTCCAGCAGGCAGTGCTGTCAGCC
AGCCTGCTCCATCGCCTCCACTTCACAGGATGCTCTTAGTGCTGTGTGCCTTGGAGGCCTCGAA
TGGAGAAATGATCAGCCACCTTAGTCCCCACTGGGTTCCTGTCCTGGGTTTGCCACTGCCAGGA
GGTTTCGGGGAAGGAGACTCACCCAAGAAAAAGCCCACATGGGAGTTCCCGTAGTGGCTCAGTG
GTCAACGGATCCGACTAGGAACCATGAGGTTGCAGGTTCCATCCCTGGCCTCCCTCAGTGGGTT
AAGGATCTGGCGTTGCTGTGAGCTATGGTGTAGGTCAAAGGCGAGGCTCAGATCTCAAGTTGCT
GTGGCTGAGGCATAGGCCGGCGGCTACAGCTCCAGTTGGACCCCTAGCCTGGGAACTTCCATAT
GCTTCAGGTGCAGCCCTAGAAAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA
GAAGAAGAAAGAAAAAACGAACGCACATGGAGCTTATAGCTCTCTTGGGTAGTTATTTAGTCCA
ACATGCTTTCATTCAGCAGGTGTTTATTGCCCCACTATGTGCCAGGCTCTGTGCTCAGTACTAG
ATATTCAGCAGGGAAGCAGACATAAAGTCTTTGTTCTGAAGGAATTTGCATTCTAATAAGTAGA
AGACTTAATAAGCAAATGAACCGGGGGAGGTGTTAATTAAGTGCTAGAAAGAAAAGGCGGCCAT
CAGACTTCTGAGGGGCAGCAGTGCTGGTTTAGGCGGGGAACTCAGGGAAGGCCTCTGAAGAGCT
GCTCTGGACAGGGTGGGGCACACTCATCAGCGCATTCCTGACGGAGGAACTGGCAAGTGCAGAG
GTCCTAAAGCTGGAACAAGTGTTTGAAAAATAGCAAGGAGGCCAGTGTGGCTGGAGTGGCAGCA
GTGAGGCAGGGAACGGAATAGATGAGAGCAGCTGATGACATGACTCATCCTACAGCCTGGAAGG
TGGTATAAGGTCAAGATTTTGCTTTTATTCAGAGAACTATGGGAAGCCTTGTAGGGTCTGAACA
GAGGAGGATCATGATCTGATTTGCATTTTTGAAGGACCTCTCTGGCTGCCGCATGGAAAAGAGG
TGGGAGGGCAGAGGGGGGCAGTTGCAGGGATGCAGGTGAGAGAAACGATGGGACTCAGGCAAAG
GCCGTTGCCTTGAAGGTGGTGGAAAGTGGTCAGACTCTGGATATATAGAATTATTTTAAAAGTT
CCATCTCTTTTAAAGATACGCTTTTGCATAATTTTAATCATGTGGTATATACAATGTAATGTCC
TGTTTTTCACTTAATAGTATGTCATGTTTTCCATGTTGGTATATGGCCTGAATAAATGGTTTTA
ATGATAGAAGACC

hide sequence

RefSeq Acc Id:

XM_021077306 ⟹ XP_020932965

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	35,856,557 - 35,865,601 (+)	NCBI

Sequence:

show sequence

CGGGGCGGTGCGCGGGCGGCGCGCGCAGACCGCCGGGAGCGGGGCGGACGCTCGCGCCCCTCCT
TCACTCCCCGCCTCCGCGCCGTTGCGTGCTCGGGCTCCGGAGCAGATATGGGCGCCGCCGCGTG
GGCATCGTCGCCCCTGCCGCCACTTGTGTCTCTCCTGCTGCTACTTCTGCCGCTCCCGGGGCTG
CCTGCGGTCTCCTGGGACCCGGCCGGTTATCTGCTCTACTGCCCATGCATGGGGCGCTTTGGGA
ACCAGGCTGATCATTTCTTGGGCTCCCTGGCATTTGCAAAGCTGTTGAACCGCACCCTGGCTGT
ACCTCCTTGGATTGAGTACCAGCATCACAAGCCTCCTTTCACCAATCTCCATGTGTCCTACCAA
AAGTACTTCAAGCTGGAGCCCCTCCAGGTCTACCACCGGGTCATCAGCCTGGAGGACTTCATGG
AGAAGCTGGCACCCACCCACTGGCCCCCTGAGAGGCGGGTGGCATACTGTTTTGAGGTGGCAGC
ACAGCGAAGCCCAGATAAGAAGACATGCCCCATGAAGGAAGGAAACCCCTTTGGCCCATTTTGG
GATCAGTTTCATGTGAGTTTCAACAAGTCAGAACTTTTTGCAGGCATTTCCTTCAGTGCCTCCT
ACAAAGACCAGTGGATCCAAAGGCGTGAGAATCACTCCCCTGTTACCTTCCTCTTCACAAGGTG
AAAATTGGAAGCAGCTTCTAGAGAAGAACAACTTCAGGTGCAGACTGAGAAATGATGTCATCCT
GATAATAATTGGATGTGCTTTATTAATTGCATTCCAGTCAGCCCTATTAAAAAAAAAAAATAGG
TTAGCAGGGCATAGGCACAGGCTGTGAAATATTTATAGAGCGTCTGTCACGTATGAGACATAAT
GCTCAAAGGCCAGAGAGATACATAAAAATGAGGAAGACCCAGTCTTTGCCTTCAGTTAGCTACA
GTCTAGATGTAATGCTGACACTGACTAACACTTGCCCTTGATGCTACAGCGTGGCAAGGAAGAG
CGTGGGCTTAGGAGTCAGGCTAGGGTTAGGAGCTGTGCAGAGTTTATGACTTCTTGTGTGGTCC
CGGCACTTGGTAGTTAATAAGCCAAAGAGAGATTGATTCAGGGGAATGAGCACAGGCTGAGGGT
GAGCCAGCCCTGAGCTCTGACCCAGCCCTGCTTCTTTCTCAGATGACCCTGAGGTGAGCCACCC
CAGCTCTCTGGCGTGAGTTTCCTCCTTGTTTAATGGAAGGAGCACTATGGTATCTGCACTATGG
TATAAAACACATGGCACATAGTAGGGGACCAACCAATGTTACCCATTACTAGTACTCACATGCT
TTATTTTATTTAAGCCTCTGAGAAGTTTCATGAAGTGGGTATTATGATCAATTTCCATTTGACA
GATGAGGAAACCGAGCTCACTGAGGTTAAGTAATCTGTCCAAGGTAATGCACCTGTTGACTGGG
CAGCTGAGATCTGTAGGTGAGGCTTTTATAGGTAATACAGACATTTATTTAGTCCCTACTATGT
TCCAGTTGCTGTTCTAAGTCTTCACTACCTAAGTCTTCTAAGGTAATAACTCATTTAATGCTT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001123424	(Get FASTA)	NCBI Sequence Viewer
	XP_020932964	(Get FASTA)	NCBI Sequence Viewer
	XP_020932965	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ABA29460	(Get FASTA)	NCBI Sequence Viewer
	CAD99201	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000007712
	ENSSSCP00000007712.2
	ENSSSCP00000026371
	ENSSSCP00000026371.3
	ENSSSCP00000039590.1
	ENSSSCP00000068223
	ENSSSCP00000068223.1
	ENSSSCP00015034145.1
	ENSSSCP00015034200.1
	ENSSSCP00015034362.1
	ENSSSCP00015034389.1
	ENSSSCP00025026318.1
	ENSSSCP00025026354.1
	ENSSSCP00025026451.1
	ENSSSCP00025026494.1
	ENSSSCP00030034835.1
	ENSSSCP00030034844.1
	ENSSSCP00035037215.1
	ENSSSCP00035037224.1
	ENSSSCP00035037232.1
	ENSSSCP00035037271.1
	ENSSSCP00040006351.1
	ENSSSCP00040006356.1
	ENSSSCP00040006416.1
	ENSSSCP00040006424.1
	ENSSSCP00045033374.1
	ENSSSCP00045033426.1
	ENSSSCP00045033488.1
	ENSSSCP00045033536.1
	ENSSSCP00050044834.1
	ENSSSCP00050044835.1
	ENSSSCP00050044844.1
	ENSSSCP00050044852.1
	ENSSSCP00055020737.1
	ENSSSCP00055020770.1
	ENSSSCP00055020812.1
	ENSSSCP00055020834.1
	ENSSSCP00060033935.1
	ENSSSCP00060033936.1
	ENSSSCP00060033939.1
	ENSSSCP00060033940.1
	ENSSSCP00065043049.1
	ENSSSCP00065043052.1
	ENSSSCP00065043057.1
	ENSSSCP00065043075.1
	ENSSSCP00070006592.1
	ENSSSCP00070006601.1
	ENSSSCP00070006606.1
	ENSSSCP00070006615.1

RefSeq Acc Id:	XP_020932964 ⟸ XM_021077305
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D0USJ8 (UniProtKB/TrEMBL), I3LQJ1 (UniProtKB/TrEMBL), Q7YRZ3 (UniProtKB/TrEMBL), A0A8D0U8X9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGAAAWASSPLPPLVSLLLLLLPLPGLPAVSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKLL NRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQVYHRVISLEDFMEKLAPTHWPPERRVAY CFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFAGISFSASYKDQWIQRSVAQVLLS CVLCRFSPKEHPVLALPGAPAQFPVLEEHRPLQKYMVWSDEMVRTGEAQIRAHLIRPYVGIHLR IGSDWKNACAMLKDGTAGAHFMASPQCVGYSRHTAAPLTMTMCLPDLKEIRRALKLWVTALSAQ SVYIATDSESYLPEIQQLFKGKVKVVSLKPEVAQIDLYILGQADHFIGNCVSSFTAFVKRERDL QGRLSSFFGMDRPPQLRDEF hide sequence

RefSeq Acc Id:	XP_020932965 ⟸ XM_021077306
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1SW62 (UniProtKB/TrEMBL), A0A5G2QTQ8 (UniProtKB/TrEMBL), A0A8D0J3Y9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGAAAWASSPLPPLVSLLLLLLPLPGLPAVSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKLL NRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQVYHRVISLEDFMEKLAPTHWPPERRVAY CFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFAGISFSASYKDQWIQRRENHSPVT FLFTR hide sequence

RefSeq Acc Id:	NP_001123424 ⟸ NM_001129952
- Peptide Label:	precursor
- UniProtKB:	Q00P49 (UniProtKB/TrEMBL), A0A4X1SUQ0 (UniProtKB/TrEMBL), Q7YRZ3 (UniProtKB/TrEMBL), A0A8D1D1Y7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGAAAWASSPLPPLVSLLLLLLPLPGLPAVSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKLL NRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQVYHRVISLEDFMEKLAPTHWPPERRVAY CFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFAGISFSASYKDQWIQRFSPKEHPV LALPGAPAQFPVLEEHRPLQKYMVWSDEMVRTGEAQIRAHLIRPYVGIHLRIGSDWKNACAMLK DGTAGAHFMASPQCVGYSRHTAAPLTMTMCLPDLKEIRRALKLWVTALSAQSVYIATDSESYLP EIQQLFKGKVKVVSLKPEVAQIDLYILGQADHFIGNCVSSFTAFVKRERDLQGRLSSFFGMDRP PQLRDEF hide sequence

Ensembl Acc Id:

ENSSSCP00000026371 ⟸ ENSSSCT00000025995

Ensembl Acc Id:

ENSSSCP00000068223 ⟸ ENSSSCT00000070479

Ensembl Acc Id:

ENSSSCP00000007712 ⟸ ENSSSCT00000007925

Ensembl Acc Id:

ENSSSCP00000039590 ⟸ ENSSSCT00000052169

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000007244	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015062822	UniProtKB/TrEMBL
	ENSSSCG00025045536	UniProtKB/TrEMBL
	ENSSSCG00030054759	UniProtKB/TrEMBL
	ENSSSCG00035066082	UniProtKB/TrEMBL
	ENSSSCG00040012135	UniProtKB/TrEMBL
	ENSSSCG00045028150	UniProtKB/TrEMBL
	ENSSSCG00050075048	UniProtKB/TrEMBL
	ENSSSCG00055013236	UniProtKB/TrEMBL
	ENSSSCG00060057641	UniProtKB/TrEMBL
	ENSSSCG00065071432	UniProtKB/TrEMBL
	ENSSSCG00070004252	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000007925	ENTREZGENE
	ENSSSCT00000007925.5	UniProtKB/TrEMBL
	ENSSSCT00000025995	ENTREZGENE
	ENSSSCT00000025995.4	UniProtKB/TrEMBL
	ENSSSCT00000052169.3	UniProtKB/TrEMBL
	ENSSSCT00000070479	ENTREZGENE
	ENSSSCT00000070479.2	UniProtKB/TrEMBL
	ENSSSCT00015084239.1	UniProtKB/TrEMBL
	ENSSSCT00015084336.1	UniProtKB/TrEMBL
	ENSSSCT00015084681.1	UniProtKB/TrEMBL
	ENSSSCT00015084730.1	UniProtKB/TrEMBL
	ENSSSCT00025061980.1	UniProtKB/TrEMBL
	ENSSSCT00025062070.1	UniProtKB/TrEMBL
	ENSSSCT00025062266.1	UniProtKB/TrEMBL
	ENSSSCT00025062361.1	UniProtKB/TrEMBL
	ENSSSCT00030076293.1	UniProtKB/TrEMBL
	ENSSSCT00030076314.1	UniProtKB/TrEMBL
	ENSSSCT00035089068.1	UniProtKB/TrEMBL
	ENSSSCT00035089086.1	UniProtKB/TrEMBL
	ENSSSCT00035089105.1	UniProtKB/TrEMBL
	ENSSSCT00035089197.1	UniProtKB/TrEMBL
	ENSSSCT00040016024.1	UniProtKB/TrEMBL
	ENSSSCT00040016029.1	UniProtKB/TrEMBL
	ENSSSCT00040016121.1	UniProtKB/TrEMBL
	ENSSSCT00040016136.1	UniProtKB/TrEMBL
	ENSSSCT00045048011.1	UniProtKB/TrEMBL
	ENSSSCT00045048087.1	UniProtKB/TrEMBL
	ENSSSCT00045048170.1	UniProtKB/TrEMBL
	ENSSSCT00045048239.1	UniProtKB/TrEMBL
	ENSSSCT00050102796.1	UniProtKB/TrEMBL
	ENSSSCT00050102798.1	UniProtKB/TrEMBL
	ENSSSCT00050102805.1	UniProtKB/TrEMBL
	ENSSSCT00050102818.1	UniProtKB/TrEMBL
	ENSSSCT00055026103.1	UniProtKB/TrEMBL
	ENSSSCT00055026147.1	UniProtKB/TrEMBL
	ENSSSCT00055026192.1	UniProtKB/TrEMBL
	ENSSSCT00055026221.1	UniProtKB/TrEMBL
	ENSSSCT00060078543.1	UniProtKB/TrEMBL
	ENSSSCT00060078545.1	UniProtKB/TrEMBL
	ENSSSCT00060078550.1	UniProtKB/TrEMBL
	ENSSSCT00060078554.1	UniProtKB/TrEMBL
	ENSSSCT00065098178.1	UniProtKB/TrEMBL
	ENSSSCT00065098182.1	UniProtKB/TrEMBL
	ENSSSCT00065098193.1	UniProtKB/TrEMBL
	ENSSSCT00065098223.1	UniProtKB/TrEMBL
	ENSSSCT00070008013.1	UniProtKB/TrEMBL
	ENSSSCT00070008022.1	UniProtKB/TrEMBL
	ENSSSCT00070008027.1	UniProtKB/TrEMBL
	ENSSSCT00070008036.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.11340	UniProtKB/TrEMBL
	3.40.50.11350	UniProtKB/TrEMBL
InterPro	GDP-Fuc_O-FucTrfase	UniProtKB/TrEMBL
	POFUT1	UniProtKB/TrEMBL
KEGG Report	ssc:397627	UniProtKB/TrEMBL
NCBI Gene	POFUT1	ENTREZGENE
PANTHER	GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1	UniProtKB/TrEMBL
	PTHR21420	UniProtKB/TrEMBL
Pfam	O-FucT	UniProtKB/TrEMBL
UniProt	A0A4X1SUQ0	ENTREZGENE
	A0A4X1SW25_PIG	UniProtKB/TrEMBL
	A0A4X1SW62	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SWF2_PIG	UniProtKB/TrEMBL
	A0A5G2QTQ8	ENTREZGENE
	A0A8D0J3Y9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0U8X9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0USJ8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1AS16_PIG	UniProtKB/TrEMBL
	A0A8D1D1Y7	ENTREZGENE, UniProtKB/TrEMBL
	I3LQJ1	ENTREZGENE
	Q00P49	ENTREZGENE, UniProtKB/TrEMBL
	Q7YRZ3	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A287A6I4	UniProtKB/TrEMBL
	A0A4X1SUQ0	UniProtKB/TrEMBL
	A0A5G2QTQ8	UniProtKB/TrEMBL
	I3LQJ1	UniProtKB/TrEMBL
VGNC ID	VGNC:95637	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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