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Gene: PITPNA (phosphatidylinositol transfer protein alpha) Canis lupus familiaris

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Symbol:

PITPNA

Name:

phosphatidylinositol transfer protein alpha

RGD ID:

12264659

Description:

ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); phospholipid binding (ortholog); stearic acid binding (ortholog); INVOLVED IN phospholipid transport (ortholog); ASSOCIATED WITH chylomicron retention disease (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

phosphatidylinositol transfer protein alpha isoform

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	45,681,533 - 45,724,915 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	45,683,853 - 45,724,820 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	44,833,638 - 44,876,376 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	46,509,554 - 46,552,503 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	46,509,553 - 46,552,617 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	45,279,916 - 45,322,629 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	45,574,196 - 45,617,095 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	45,627,661 - 45,671,038 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PITPNA	Dog	chylomicron retention disease		ISO	RGD:1550960	9068941	OMIM:246700	MouseDO

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PITPNA	Dog	axonogenesis	involved_in	IEA	UniProtKB:P53810\|ensembl:ENSMUSP00000115723	150520179		Ensembl	GO_REF:0000107
PITPNA	Dog	intermembrane lipid transfer	involved_in	IEA	GO:0008526\|GO:0120019	150520179		GOC	GO_REF:0000108
PITPNA	Dog	lipid transport	involved_in	IEA	UniProtKB-KW:KW-0445	150520179		UniProt	GO_REF:0000043
PITPNA	Dog	phospholipid transport		ISO	RGD:61885	9068941		RGD	PMID:11478882\|REF_RGD_ID:727320
PITPNA	Dog	phospholipid transport	involved_in	IEA	UniProtKB:Q00169\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Dog	phospholipid transport	involved_in	IEA	InterPro:IPR001666	150520179		InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PITPNA	Dog	cytoplasm	located_in	IEA	UniProtKB:P53810\|ensembl:ENSMUSP00000115723	150520179		Ensembl	GO_REF:0000107
PITPNA	Dog	cytoplasm	is_active_in	IBA	FB:FBgn0267975\|MGI:1919045\|MGI:1927542\|MGI:99887\|PANTHER:PTN000069712\|RGD:620143\|UniProtKB:O00562\|UniProtKB:Q9UKF7\|ZFIN:ZDB-GENE-040426-2791\|ZFIN:ZDB-GENE-040426-744\|ZFIN:ZDB-GENE-040426-895\|dictyBase:DDB_G0274579\|dictyBase:DDB_G0290069	150520179		GO_Central	GO_REF:0000033
PITPNA	Dog	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
PITPNA	Dog	nucleus	located_in	IEA	UniProtKB:P53810\|ensembl:ENSMUSP00000115723	150520179		Ensembl	GO_REF:0000107
PITPNA	Dog	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PITPNA	Dog	fatty-acyl-CoA binding	enables	ISO	RGD:61885	9068941	PMID:12641450	UniProt	PMID:12641450\|REF_RGD_ID:8553638
PITPNA	Dog	lipid binding	enables	IEA	UniProtKB-KW:KW-0446	150520179		UniProt	GO_REF:0000043
PITPNA	Dog	phosphatidylcholine binding	enables	IEA	UniProtKB:P53810\|UniProtKB:Q00169\|ensembl:ENSMUSP00000115723\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Dog	phosphatidylcholine binding	enables	IBA	MGI:99887\|PANTHER:PTN000069712\|RGD:61885\|RGD:620143\|UniProtKB:O00562\|UniProtKB:P48739\|UniProtKB:Q00169	150520179		GO_Central	GO_REF:0000033
PITPNA	Dog	phosphatidylcholine transfer activity	enables	IEA	UniProtKB:P53810\|UniProtKB:Q00169\|ensembl:ENSMUSP00000115723\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Dog	phosphatidylcholine transporter activity	enables	IEA	UniProtKB:Q00169\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Dog	phosphatidylcholine transporter activity	enables	IBA	FB:FBgn0003218\|MGI:99887\|PANTHER:PTN000069712\|RGD:61885\|RGD:620143\|UniProtKB:P48739\|UniProtKB:Q00169\|UniProtKB:Q2HJ54\|UniProtKB:Q9TR36\|ZFIN:ZDB-GENE-040426-2791\|ZFIN:ZDB-GENE-040426-895	150520179		GO_Central	GO_REF:0000033
PITPNA	Dog	phosphatidylinositol binding	enables	IEA	UniProtKB:P53810\|UniProtKB:Q00169\|ensembl:ENSMUSP00000115723\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Dog	phosphatidylinositol binding	enables	IBA	FB:FBgn0003218\|MGI:1919045\|MGI:99887\|PANTHER:PTN000069712\|RGD:61885\|RGD:620143\|UniProtKB:O00562\|UniProtKB:P48739\|UniProtKB:Q00169\|UniProtKB:Q9UKF7	150520179		GO_Central	GO_REF:0000033
PITPNA	Dog	phosphatidylinositol transfer activity	enables	IEA	UniProtKB:P53810\|UniProtKB:Q00169\|ensembl:ENSMUSP00000115723\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Dog	phosphatidylinositol transfer activity	enables	IBA	FB:FBgn0003218\|MGI:99887\|PANTHER:PTN000069712\|RGD:61885\|RGD:620143\|UniProtKB:O00562\|UniProtKB:P48739\|UniProtKB:Q00169\|UniProtKB:Q2HJ54\|UniProtKB:Q9BZ72\|UniProtKB:Q9TR36\|UniProtKB:Q9UKF7\|ZFIN:ZDB-GENE-040426-2791\|ZFIN:ZDB-GENE-040426-895\|dictyBase:DDB_G0274579\|dictyBase:DDB_G0290069	150520179		GO_Central	GO_REF:0000033
PITPNA	Dog	phospholipid binding	enables	ISO	RGD:61885	9068941	PMID:11104777	MGI	PMID:11104777\|REF_RGD_ID:8554752
PITPNA	Dog	phospholipid transporter activity	enables	IEA	InterPro:IPR001666	150520179		InterPro	GO_REF:0000002
PITPNA	Dog	protein binding	enables	ISO	UniProtKB:P13473-2\|UniProtKB:P31930\|UniProtKB:P55212\|UniProtKB:Q9Y371	9068941	PMID:32814053	IntAct	PMID:32814053
PITPNA	Dog	stearic acid binding	enables	ISO	RGD:61885	9068941	PMID:12641450	UniProt	PMID:12641450\|REF_RGD_ID:8553638

PMID:22301074	PMID:30032202

PITPNA
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	45,681,533 - 45,724,915 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	45,683,853 - 45,724,820 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	44,833,638 - 44,876,376 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	46,509,554 - 46,552,503 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	46,509,553 - 46,552,617 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	45,279,916 - 45,322,629 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	45,574,196 - 45,617,095 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	45,627,661 - 45,671,038 (-)	NCBI		UU_Cfam_GSD_1.0

PITPNA
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	1,517,718 - 1,562,792 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	1,517,718 - 1,562,792 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	1,421,012 - 1,466,086 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	1,368,033 - 1,412,835 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	1,368,034 - 1,412,835	NCBI
Celera	17	1,436,720 - 1,481,546 (-)	NCBI		Celera
Cytogenetic Map	17	p13.3	NCBI
HuRef	17	1,321,442 - 1,362,012 (-)	NCBI		HuRef
CHM1_1	17	1,429,972 - 1,474,726 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	1,406,472 - 1,451,511 (-)	NCBI		T2T-CHM13v2.0

Pitpna
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	75,478,889 - 75,519,630 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	75,478,923 - 75,519,630 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	75,588,079 - 75,628,804 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	75,588,097 - 75,628,804 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	75,401,610 - 75,442,280 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	75,404,303 - 75,444,973 (+)	NCBI		MGSCv36	mm8
Celera	11	83,097,260 - 83,137,915 (+)	NCBI		Celera
Cytogenetic Map	11	B5	NCBI
cM Map	11	45.92	NCBI

Pitpna
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	60,929,050 - 60,969,614 (+)	NCBI		GRCr8
mRatBN7.2	10	60,430,712 - 60,473,564 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	60,430,748 - 60,471,342 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	65,077,879 - 65,118,066 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	64,583,298 - 64,623,485 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	60,045,869 - 60,086,057 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	63,731,767 - 63,772,049 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	63,731,767 - 63,772,049 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	64,232,947 - 64,273,229 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	62,908,533 - 62,948,856 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	62,922,155 - 62,962,479 (+)	NCBI
Celera	10	59,458,996 - 59,498,755 (+)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Pitpna
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955481	1,611,830 - 1,645,753 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955481	1,611,579 - 1,649,481 (+)	NCBI	ChiLan1.0	ChiLan1.0

PITPNA
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	9,088,544 - 9,133,385 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	11,054,808 - 11,099,477 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	1,500,900 - 1,545,643 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	1,400,504 - 1,442,141 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	1,404,137 - 1,440,224 (-)	Ensembl	panpan1.1		panPan2

Pitpna
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	44,785,512 - 44,826,539 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936538	7,667,162 - 7,704,315 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936538	7,663,457 - 7,704,484 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PITPNA
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	47,739,633 - 47,785,375 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	47,739,631 - 47,785,387 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	49,624,341 - 49,670,292 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PITPNA
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	1,193,326 - 1,235,677 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666059	20,750,511 - 20,794,613 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pitpna
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	4,242,046 - 4,274,625 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624786	4,238,500 - 4,274,890 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in PITPNA
406 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_022423448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038486611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038486612	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038548467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038612408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038677682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038677683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_537767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000030458 ⟹ ENSCAFP00000028298

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	45,683,853 - 45,724,820 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845025706 ⟹ ENSCAFP00845020257

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	46,509,553 - 46,552,617 (-)	Ensembl

RefSeq Acc Id:

XM_022423448 ⟹ XP_022279156

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	45,692,409 - 45,724,915 (-)	NCBI
Dog10K_Boxer_Tasha	9	44,844,515 - 44,876,376 (-)	NCBI

Sequence:

show sequence

CCACGACGAAGGCGCACAGGCAGCCGGGCCGGGCCGGGCCACGGGGACAGCGGCCGCCGGGAAGCGGGCGGGAGGCCGGGCGGGCAGTGGGCAGCCGCCGAGCTGCGGAGCGACATGGTGCTGCTCAA
GGAGTATCGAGTCATCCTGCCTGTGTCTGTAGATGAGTATCAAGTAGGGCAGCTGTATTCTGTGGCTGAGGCCAGCAAAAATGAAACGGGTGGCGGTGAAGGCGTGGAGGTCCTGGTGAATGAGCCCT
ATGAGAAGGATGGTGAGAAAGGCCAGTACACACACAAGATCTACCACTTACAGAGCAAAGTGCCCACGTTTGTTCGAATGCTAGCCCCAGAGGGAGCCCTGAATATACATGAAAAAGCATGGAATGCC
TACCCTTATTGCAGAACTGTTATTACGAATGAATACATGAAAGAAGACTTTCTGATTAAAATTGAAACCTGGCACAAACCAGATCTTGGCACCCAGGAAAATGTGCATAAACTGGAGCCTGAGGCATG
GAAACACGTGGAAGCCATATATATAGACATTGCAGATCGAAGCCAAGTACTTAGCAAGGACTACAAGGCCGAGGAAGACCCAGCAAAATTTAAATCTATCAAAACTGGCCGAGGACCCTTGGGCCCAA
ATTGGAAGCAAGAACTTGTAAATCAGAAAGACTGCCCATACATGTGTGCATACAAACTGGTTACTGTCAAGTTCAAGTGGTGGGGCCTGCAGAACAAAGTGGAAAACTTTATACATAAGCAAGAAAGG
CGTCTATTTACAAACTTCCACAGGCAGCTGTTCTGTTGGCTCGATAAGTGGGTTGACCTGACTATGGACGATATCCGAAGGATGGAAGAAGAGACGAAGAGACAGCTGGATGAGATAAGAGAAACTGA
GGCTCCAAGAAGCTGAGGATACCTTCTAGTTCAGTGAACAAGTGCCTCCTGGGCCTTTGGCCACTAACGCTATAGATAATGACCCTGGGATAAAACTCATGATTTACTGGCCTCTAGAACATTTGCTT
AAAAACACCAGAGATACATGTGTCAGAGTACATGAATAAAATTCTGCAGCATTTTCTTCCCA

hide sequence

RefSeq Acc Id:

XM_038486611 ⟹ XP_038342539

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	45,279,916 - 45,322,629 (-)	NCBI

RefSeq Acc Id:

XM_038486612 ⟹ XP_038342540

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	45,290,796 - 45,322,629 (-)	NCBI

RefSeq Acc Id:

XM_038548466 ⟹ XP_038404394

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	45,627,661 - 45,671,038 (-)	NCBI

RefSeq Acc Id:

XM_038548467 ⟹ XP_038404395

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	45,638,538 - 45,671,038 (-)	NCBI

RefSeq Acc Id:

XM_038612407 ⟹ XP_038468335

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	45,574,196 - 45,617,095 (-)	NCBI

RefSeq Acc Id:

XM_038612408 ⟹ XP_038468336

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	45,585,059 - 45,617,095 (-)	NCBI

RefSeq Acc Id:

XM_038677682 ⟹ XP_038533610

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	46,509,554 - 46,552,503 (-)	NCBI

RefSeq Acc Id:

XM_038677683 ⟹ XP_038533611

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	46,520,427 - 46,552,503 (-)	NCBI

RefSeq Acc Id:

XM_537767 ⟹ XP_537767

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	45,681,533 - 45,724,915 (-)	NCBI
Dog10K_Boxer_Tasha	9	44,833,638 - 44,876,376 (-)	NCBI

Sequence:

show sequence

CCACGACGAAGGCGCACAGGCAGCCGGGCCGGGCCGGGCCACGGGGACAGCGGCCGCCGGGAAG
CGGGCGGGAGGCCGGGCGGGCAGTGGGCAGCCGCCGAGCTGCGGAGCGACATGGTGCTGCTCAAGGAGTATCGAGTCATCCTGCCTGTGTCTGTAGATGAGTATCAAGTAGGGCAGCTGTATTCTGTG
GCTGAGGCCAGCAAAAATGAAACGGGTGGCGGTGAAGGCGTGGAGGTCCTGGTGAATGAGCCCTATGAGAAGGATGGTGAGAAAGGCCAGTACACACACAAGATCTACCACTTACAGAGCAAAGTGCC
CACGTTTGTTCGAATGCTAGCCCCAGAGGGAGCCCTGAATATACATGAAAAAGCATGGAATGCCTACCCTTATTGCAGAACTGTTATTACGAATGAATACATGAAAGAAGACTTTCTGATTAAAATTG
AAACCTGGCACAAACCAGATCTTGGCACCCAGGAAAATGTGCATAAACTGGAGCCTGAGGCATGGAAACACGTGGAAGCCATATATATAGACATTGCAGATCGAAGCCAAGTACTTAGCAAGGACTAC
AAGGCCGAGGAAGACCCAGCAAAATTTAAATCTATCAAAACTGGCCGAGGACCCTTGGGCCCAAATTGGAAGCAAGAACTTGTAAATCAGAAAGACTGCCCATACATGTGTGCATACAAACTGGTTAC
TGTCAAGTTCAAGTGGTGGGGCCTGCAGAACAAAGTGGAAAACTTTATACATAAGCAAGAAAGGCGTCTATTTACAAACTTCCACAGGCAGCTGTTCTGTTGGCTCGATAAGTGGGTTGACCTGACTA
TGGACGATATCCGAAGGATGGAAGAAGAGACGAAGAGACAGCTGGATGAGATGAGACAAAAGGACCCAGTGAAAGGAATGACTGCGGATGACTAAAGGCACCCCTCCCCTTCTGCACTTTTTGCAAGA
CAGTGGTCAACAGGAAGGCCCAGCAGCTCCACCCTCCCGAGTGACAGGCCATCTTCGGACGCAGCCTTTCTGTGCCCATTCTTCAGGCAACTTTCGATCCCTTACTGTAGCTAATTCTAGATGCCCTG
TAATATTGTGAACAAATAGACCGTCTGGTATTATGAAGCCCATGTGTGCAGGAGCCTGCTCCTCTGAGATGTATGGCGTGTAGGTTGCTGTATTTACAGCTCCTCCCTCTCCAACCATTTTGTTCTCA
ACCCATTTCTGTGTGTCCCCCCACCCCCAGCACCCCTTCCTTTATTCCCAAGTGACATTTTTAGTCTTTCAAAATAGCTGCCTTTTGTGATGTGGTGATTTAAATGATTTAAGTTCATTTGTTTTCAA
CCTTGGGATAAACTGAGGTATTTTGCTTCATGGACAGATCTTTGCAATTTTGAGTGCTCACCTGGGGAGAGATGAGTTAGAAATACAGTTTTTTCCTCCAGTTCCACAGAACAGCAGTGTGGCTTCAT
AACTCTGATCTCTGCTCTCAGTAACCCATTGTTAATGAGCCGTAGGCACCAAGGAGGTGCCTAGTACCCAGGGCCAGCCAGTCTGTTTTAAAAATTTAACAAATACAGATAACCCCTGCCCCAGGCAT
TGCATCTCTGGTCACTAGTCTTATGGAGACACCTGTGGTTTCTTGGCCCTCCTGTTGCCCACTCTGTCTGAACCTTGCAGAGTCCACAGTAGGCCTGGGTCAGTTCTCCATCTGGAGAGACCTGTCCA
GTGTGGCCCTTAGAGTTGAGTCAGCCCCATATGTACTAATTAGTCTGCCCCTCCTCTCCCCCACCCACCACTGGAGGAGCTCTATATGTCCATGCTCCTCTTCCCTTTTGGGCTGGTGCTGTCACTCA
GCAATAATCCTCTTTTCTGTGTGCTTTCTTAGATTCCTGTCCTCTGCCTTTGAGGCCGGTTAGGACACAAGGGTCCTGATCTTTTCATGCTGCACAAAATGAGCATGCAAAAAGCTTTTCCCCAGCAG
AACATGTTCCCCTTGTCTCCAGTTGCTGGAAAGGAATTTGGGGATCAGGAACTCAGCTCATCCCACCCCCATGCTGAGTTCTGTCCTGGACAATCAAAAGTCAGAAGCAAGCAGCTATCATAGTCTAG
AACTCTACCAAAGGAGGCCTGTGAAAAAGTCCAGACTCCAGGGGAGGTAGAAGCTACTCAGTGTTTCACAGTTGTGTACAAGTTGGCAGAACCCAAGTATGCCTTCCCAGCAGAAAAATCAGAGATAA
CTCCGGTGTCACCTGACATTTCCCAAGCCTTGTGAAGTATGTTAGCCCAGTGTGTTGTGATCCAAGCCCATTCTAGTCTTCGTGCAGTGGCTGGTTAAGAGACCAAATCTGTGTTGAGGGAGCGAGAA
GTAGGATGGGACCATTTATCCTTATGTTGTTGTCAGTTTGTTTTGCCTTACTGATTTCTAAGTGCAATAAGGGAGTGTTTCATAGGATGGCACCTGTGGCATCCTAATGGATGCTTCCCTGTGACCCT
CTTGGGGCAACAGTGGACAGACTCAGACCCCTCAGTGTGGTCATCTCCTACCTTCATTGAGTCCTCTTTGGGACTAGGAAATGTCCTGTTACACCTTCCTTCCAGTCTCCTCACCTTGCAGGGCCTAT
AGTAATGGATCTGGGGCAGTTCAGTTGGTTCTTAGGATTCCCAGCTGCTGGTAGCATCTATTTGGGAAAGTGAAGCATTCCTATTGGAGAAAAATGTAAATGTTTTCCTACAAGCTCTCTATTAGGTA
TAATTATATTTGTGCTTAAAGTGTTCCCTTCTTCATTCATCAACTAAGTTCAAAGGGGGATAACCTGGGAGAAATGAACTGTGATGTTCTAACCAGTTATGTGGTTTGAGGGTCAGCAAGTGTTAAGT
CTCCTTGCTTCAGCTGTTCTCTGAGATCCACACATACCACTCCAACTCTGGTGGGGGCTTGCTTTTTATCTGGCTTTTCTCTGGCTTCTCCCATCTCCATCTGTTGCCCCAGTTTGAAAGCATCCACA
TGAGCAGAGCTAGAATTTCCTGAGGTCAGCTGGATCTGGGGCTCCAGCCCACAGGAACATAAGAAGGGGTATCCCTGGTCTCTTCTATCCCCACGGATAGTATTGCTGCTGAGCAACAGTGTTGGCTT
CTTTTAAGTATCCCCCTTACCTTCTCACCCACATCCTGACTAGCACTGACTAGCACCCAGAGAGGTTTATGATGAAAGGCTCAACTCCAGGGGTAGTACTTGAGGTCGTGCTATGCCCCTTCAGACCA
GCTGCTTCCATCAGATTTCCAGTGTCGGAGTCGCAGTTTGAAGCAGCAGCGCCTCTGTAAGGGGTAAGGAGGGGCGGTGCTGGGGTCTGGCCTTCTCTCACAGAGAGAGGTCAGGGACAGGGCCAGTA
TTGTGGGCATGTGTATATCTTCCCAAGTTCTCTTACAGTCCCTGCCGGGACTCCCTGACTTATTTTGGTTGGTTCCTAGTGCTACTTCTTTTACAAAATACACTTTGTAGAACTGATTAGATTACCTT
GTTAATTTAATGTGAGTTCGTGCCTTTTTGTCTCAATCTTCCAAAACAGGTATATTGGGGGAAAAAGCAGTCTAATAAAATCCTAGACAGAG

hide sequence


Protein RefSeqs	XP_022279156	(Get FASTA)	NCBI Sequence Viewer
	XP_038342539	(Get FASTA)	NCBI Sequence Viewer
	XP_038342540	(Get FASTA)	NCBI Sequence Viewer
	XP_038404394	(Get FASTA)	NCBI Sequence Viewer
	XP_038404395	(Get FASTA)	NCBI Sequence Viewer
	XP_038468335	(Get FASTA)	NCBI Sequence Viewer
	XP_038468336	(Get FASTA)	NCBI Sequence Viewer
	XP_038533610	(Get FASTA)	NCBI Sequence Viewer
	XP_038533611	(Get FASTA)	NCBI Sequence Viewer
	XP_537767	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000028298.4
	ENSCAFP00040004183.1
	ENSCAFP00845020257
	ENSCAFP00845020257.1

RefSeq Acc Id:	XP_537767 ⟸ XM_537767
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0RWE6 (UniProtKB/TrEMBL), A0A8I3NQG7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLGTQENVHKL EPEAWKHVEAIYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDE MRQKDPVKGMTADD hide sequence

RefSeq Acc Id:

XP_022279156 ⟸ XM_022423448

- Peptide Label:

isoform X2

- Sequence:

show sequence

MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHKIYHL
QSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAIYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDCPYMCA
YKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDEIRETEAPRS

hide sequence

Ensembl Acc Id:

ENSCAFP00000028298 ⟸ ENSCAFT00000030458

RefSeq Acc Id:	XP_038342539 ⟸ XM_038486611
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038342540 ⟸ XM_038486612
- Peptide Label:	isoform X2

Protein Domains

Phosphatidylinositol transfer protein N-terminal

RGD ID:

13684710

Promoter ID:

EPDNEW_C2778

Type:

initiation region

Name:

PITPNA_1

Description:

phosphatidylinositol transfer protein alpha

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	45,725,023 - 45,725,083	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000019188	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00040002556	UniProtKB/TrEMBL
	ENSCAFG00845014360	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000030458.6	UniProtKB/TrEMBL
	ENSCAFT00040004868.1	UniProtKB/TrEMBL
	ENSCAFT00845025706	ENTREZGENE
	ENSCAFT00845025706.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.530.20	UniProtKB/TrEMBL
InterPro	PI_transfer	UniProtKB/TrEMBL
	PI_transfer_N	UniProtKB/TrEMBL
	START-like_dom_sf	UniProtKB/TrEMBL
NCBI Gene	PITPNA	ENTREZGENE
PANTHER	PHOSPHATIDYLINOSITOL TRANSFER PROTEIN ALPHA ISOFORM	UniProtKB/TrEMBL
	PTHR10658	UniProtKB/TrEMBL
Pfam	IP_trans	UniProtKB/TrEMBL
PRINTS	PITRANSFER	UniProtKB/TrEMBL
Superfamily-SCOP	Bet v1-like	UniProtKB/TrEMBL
UniProt	A0A8C0RWE6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NQG7	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:44583	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - MGI