Advanced Search (OLGA)

Gene: PITPNA (phosphatidylinositol transfer protein alpha) Pan paniscus

Subscribe to Updates

Analyze

Symbol:

PITPNA

Name:

phosphatidylinositol transfer protein alpha

RGD ID:

12042965

Description:

ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); phospholipid binding (ortholog); stearic acid binding (ortholog); INVOLVED IN phospholipid transport (ortholog); ASSOCIATED WITH chylomicron retention disease (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

phosphatidylinositol transfer protein alpha isoform

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	9,088,544 - 9,133,385 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	11,054,808 - 11,099,477 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	1,500,900 - 1,545,643 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	1,400,504 - 1,442,141 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	1,404,137 - 1,440,224 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PITPNA	Bonobo	chylomicron retention disease		ISO	RGD:1550960	9068941	OMIM:246700	MouseDO

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PITPNA	Bonobo	axonogenesis	involved_in	IEA	UniProtKB:P53810\|ensembl:ENSMUSP00000115723	150520179		Ensembl	GO_REF:0000107
PITPNA	Bonobo	intermembrane lipid transfer	involved_in	IEA	GO:0008526\|GO:0120019	150520179		GOC	GO_REF:0000108
PITPNA	Bonobo	lipid transport	involved_in	IEA	UniProtKB-KW:KW-0445	150520179		UniProt	GO_REF:0000043
PITPNA	Bonobo	phospholipid transport		ISO	RGD:61885	9068941		RGD	PMID:11478882\|REF_RGD_ID:727320
PITPNA	Bonobo	phospholipid transport	involved_in	IEA	UniProtKB:Q00169\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Bonobo	phospholipid transport	involved_in	IEA	InterPro:IPR001666	150520179		InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PITPNA	Bonobo	cytoplasm	located_in	IEA	UniProtKB:P53810\|ensembl:ENSMUSP00000115723	150520179		Ensembl	GO_REF:0000107
PITPNA	Bonobo	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
PITPNA	Bonobo	cytoplasm	located_in	IEA	PANTHER:PTN000069797\|PANTHER:PTN002579773	150520179		TreeGrafter	GO_REF:0000118
PITPNA	Bonobo	nucleus	located_in	IEA	UniProtKB:P53810\|ensembl:ENSMUSP00000115723	150520179		Ensembl	GO_REF:0000107
PITPNA	Bonobo	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PITPNA	Bonobo	fatty-acyl-CoA binding	enables	ISO	RGD:61885	9068941	PMID:12641450	UniProt	PMID:12641450\|REF_RGD_ID:8553638
PITPNA	Bonobo	lipid binding	enables	IEA	UniProtKB-KW:KW-0446	150520179		UniProt	GO_REF:0000043
PITPNA	Bonobo	phosphatidylcholine binding	enables	IEA	UniProtKB:P53810\|UniProtKB:Q00169\|ensembl:ENSMUSP00000115723\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Bonobo	phosphatidylcholine binding	enables	IEA	PANTHER:PTN000069797\|PANTHER:PTN002579773	150520179		TreeGrafter	GO_REF:0000118
PITPNA	Bonobo	phosphatidylcholine transfer activity	enables	IEA	UniProtKB:P53810\|UniProtKB:Q00169\|ensembl:ENSMUSP00000115723\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Bonobo	phosphatidylcholine transporter activity	enables	IEA	PANTHER:PTN000069797\|PANTHER:PTN002579773	150520179		TreeGrafter	GO_REF:0000118
PITPNA	Bonobo	phosphatidylcholine transporter activity	enables	IEA	UniProtKB:Q00169\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Bonobo	phosphatidylinositol binding	enables	IEA	UniProtKB:P53810\|UniProtKB:Q00169\|ensembl:ENSMUSP00000115723\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Bonobo	phosphatidylinositol binding	enables	IEA	PANTHER:PTN000069797\|PANTHER:PTN002579773	150520179		TreeGrafter	GO_REF:0000118
PITPNA	Bonobo	phosphatidylinositol transfer activity	enables	IEA	UniProtKB:P53810\|UniProtKB:Q00169\|ensembl:ENSMUSP00000115723\|ensembl:ENSP00000316809	150520179		Ensembl	GO_REF:0000107
PITPNA	Bonobo	phosphatidylinositol transfer activity	enables	IEA	ARBA:ARBA00028015	150520179		UniProt	GO_REF:0000117
PITPNA	Bonobo	phosphatidylinositol transfer activity	enables	IEA	PANTHER:PTN000069797\|PANTHER:PTN002579773	150520179		TreeGrafter	GO_REF:0000118
PITPNA	Bonobo	phospholipid binding	enables	ISO	RGD:61885	9068941	PMID:11104777	MGI	PMID:11104777\|REF_RGD_ID:8554752
PITPNA	Bonobo	phospholipid transporter activity	enables	IEA	InterPro:IPR001666	150520179		InterPro	GO_REF:0000002
PITPNA	Bonobo	protein binding	enables	ISO	UniProtKB:P13473-2\|UniProtKB:P31930\|UniProtKB:P55212\|UniProtKB:Q9Y371	9068941	PMID:32814053	IntAct	PMID:32814053
PITPNA	Bonobo	stearic acid binding	enables	ISO	RGD:61885	9068941	PMID:12641450	UniProt	PMID:12641450\|REF_RGD_ID:8553638

PMID:22301074	PMID:30032202

PITPNA
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	9,088,544 - 9,133,385 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	11,054,808 - 11,099,477 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	1,500,900 - 1,545,643 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	1,400,504 - 1,442,141 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	1,404,137 - 1,440,224 (-)	Ensembl	panpan1.1		panPan2

PITPNA
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	1,517,718 - 1,562,792 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	1,517,718 - 1,562,792 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	1,421,012 - 1,466,086 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	1,368,033 - 1,412,835 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	1,368,034 - 1,412,835	NCBI
Celera	17	1,436,720 - 1,481,546 (-)	NCBI		Celera
Cytogenetic Map	17	p13.3	NCBI
HuRef	17	1,321,442 - 1,362,012 (-)	NCBI		HuRef
CHM1_1	17	1,429,972 - 1,474,726 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	1,406,472 - 1,451,511 (-)	NCBI		T2T-CHM13v2.0

Pitpna
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	75,478,889 - 75,519,630 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	75,478,923 - 75,519,630 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	75,588,079 - 75,628,804 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	75,588,097 - 75,628,804 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	75,401,610 - 75,442,280 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	75,404,303 - 75,444,973 (+)	NCBI		MGSCv36	mm8
Celera	11	83,097,260 - 83,137,915 (+)	NCBI		Celera
Cytogenetic Map	11	B5	NCBI
cM Map	11	45.92	NCBI

Pitpna
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	60,929,050 - 60,969,614 (+)	NCBI		GRCr8
mRatBN7.2	10	60,430,712 - 60,473,564 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	60,430,748 - 60,471,342 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	65,077,879 - 65,118,066 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	64,583,298 - 64,623,485 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	60,045,869 - 60,086,057 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	63,731,767 - 63,772,049 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	63,731,767 - 63,772,049 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	64,232,947 - 64,273,229 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	62,908,533 - 62,948,856 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	62,922,155 - 62,962,479 (+)	NCBI
Celera	10	59,458,996 - 59,498,755 (+)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Pitpna
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955481	1,611,830 - 1,645,753 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955481	1,611,579 - 1,649,481 (+)	NCBI	ChiLan1.0	ChiLan1.0

PITPNA
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	45,681,533 - 45,724,915 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	45,683,853 - 45,724,820 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	44,833,638 - 44,876,376 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	46,509,554 - 46,552,503 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	46,509,553 - 46,552,617 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	45,279,916 - 45,322,629 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	45,574,196 - 45,617,095 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	45,627,661 - 45,671,038 (-)	NCBI		UU_Cfam_GSD_1.0

Pitpna
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	44,785,512 - 44,826,539 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936538	7,667,162 - 7,704,315 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936538	7,663,457 - 7,704,484 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PITPNA
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	47,739,633 - 47,785,375 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	47,739,631 - 47,785,387 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	49,624,341 - 49,670,292 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PITPNA
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	1,193,326 - 1,235,677 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666059	20,750,511 - 20,794,613 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pitpna
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	4,242,046 - 4,274,625 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624786	4,238,500 - 4,274,890 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_034941225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000030790 ⟹ ENSPPAP00000008155

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	1,404,137 - 1,440,224 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000030795 ⟹ ENSPPAP00000008160

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	1,404,137 - 1,437,959 (-)	Ensembl

RefSeq Acc Id:

XM_034941225 ⟹ XP_034797116

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	19	9,088,544 - 9,133,385 (-)	NCBI
NHGRI_mPanPan1	17	11,054,808 - 11,099,477 (-)	NCBI
Mhudiblu_PPA_v0	17	1,500,900 - 1,545,643 (-)	NCBI


Protein RefSeqs	XP_034797116	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000008155.1
	ENSPPAP00000008160.1

RefSeq Acc Id:	XP_034797116 ⟸ XM_034941225
- UniProtKB:	A0A2R8ZUC2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSPPAP00000008160 ⟸ ENSPPAT00000030795

Ensembl Acc Id:

ENSPPAP00000008155 ⟸ ENSPPAT00000030790

Protein Domains

Phosphatidylinositol transfer protein N-terminal

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000027318	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000030790.1	UniProtKB/TrEMBL
	ENSPPAT00000030795.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.530.20	UniProtKB/TrEMBL
InterPro	PI_transfer	UniProtKB/TrEMBL
	PI_transfer_N	UniProtKB/TrEMBL
	START-like_dom_sf	UniProtKB/TrEMBL
NCBI Gene	PITPNA	ENTREZGENE
PANTHER	PHOSPHATIDYLINOSITOL TRANSFER PROTEIN ALPHA ISOFORM	UniProtKB/TrEMBL
	PTHR10658	UniProtKB/TrEMBL
Pfam	IP_trans	UniProtKB/TrEMBL
PRINTS	PITRANSFER	UniProtKB/TrEMBL
Superfamily-SCOP	Bet v1-like	UniProtKB/TrEMBL
UniProt	A0A2R8ZUC2	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZUC7_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Send us a Message

Imported Disease Annotations - MGI