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Gene: UBAC2 (UBA domain containing 2) Canis lupus familiaris

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Symbol:

UBAC2

Name:

UBA domain containing 2

RGD ID:

12224251

Description:

INVOLVED IN protein localization to endoplasmic reticulum (ortholog); ASSOCIATED WITH Anal Atresia, Hypospadias, and Penoscrotal Inversion (ortholog); basal cell carcinoma (ortholog); holoprosencephaly (ortholog); FOUND IN endoplasmic reticulum (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ubiquitin-associated domain-containing protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	UBAC2 (UBA domain containing 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ubac2 (ubiquitin associated domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ubac2 (UBA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ubac2 (UBA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	UBAC2 (UBA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ubac2 (UBA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	UBAC2 (UBA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	UBAC2 (UBA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ubac2 (UBA domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	22	49,246,210 - 49,425,611 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	22	49,245,930 - 49,425,088 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	22	49,027,436 - 49,206,830 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	22	49,687,669 - 49,867,389 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	22	49,687,909 - 49,867,388 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	22	49,338,912 - 49,518,273 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	22	49,373,235 - 49,552,802 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	22	49,409,455 - 49,589,145 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Anal Atresia, Hypospadias, and Penoscrotal Inversion (ISO)

basal cell carcinoma (ISO)

holoprosencephaly (ISO)

holoprosencephaly 5 (ISO)

propionic acidemia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of canonical Wnt signaling pathway (IEA)

negative regulation of retrograde protein transport, ER to cytosol (IEA)

protein localization to endoplasmic reticulum (IEA,ISO)

Cellular Component

endoplasmic reticulum (IEA)

membrane (IEA)

Molecular Function

protein binding (ISO)

serine-type endopeptidase activity (IBA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

UBAC2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	22	49,246,210 - 49,425,611 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	22	49,245,930 - 49,425,088 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	22	49,027,436 - 49,206,830 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	22	49,687,669 - 49,867,389 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	22	49,687,909 - 49,867,388 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	22	49,338,912 - 49,518,273 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	22	49,373,235 - 49,552,802 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	22	49,409,455 - 49,589,145 (+)	NCBI		UU_Cfam_GSD_1.0

UBAC2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	99,200,854 - 99,386,504 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	99,200,774 - 99,386,504 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	99,853,108 - 100,038,758 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	98,651,164 - 98,836,682 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	13	98,651,163 - 98,836,682	NCBI
Celera	13	80,696,241 - 80,882,354 (+)	NCBI		Celera
Cytogenetic Map	13	q32.3	NCBI
HuRef	13	80,446,903 - 80,633,071 (+)	NCBI		HuRef
CHM1_1	13	99,822,450 - 100,008,942 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	13	98,411,009 - 98,596,811 (+)	NCBI		T2T-CHM13v2.0

Ubac2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	122,115,970 - 122,258,447 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	122,116,032 - 122,258,446 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	121,878,559 - 122,021,035 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	121,878,620 - 122,021,034 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	122,277,828 - 122,420,257 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	122,277,828 - 122,420,257 (+)	NCBI		MGSCv36	mm8
Celera	14	120,439,908 - 120,582,638 (+)	NCBI		Celera
Cytogenetic Map	14	E5	NCBI
cM Map	14	65.78	NCBI

Ubac2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	105,366,776 - 105,514,435 (+)	NCBI		GRCr8
mRatBN7.2	15	98,960,139 - 99,107,795 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	98,960,139 - 99,107,787 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	102,892,658 - 103,041,667 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	103,987,216 - 104,133,671 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	100,915,036 - 101,061,498 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	108,286,407 - 108,433,531 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	108,286,453 - 108,433,529 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	111,674,945 - 111,821,086 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	107,009,509 - 107,125,419 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	15	106,990,258 - 107,141,196 (+)	NCBI
Celera	15	97,734,913 - 97,880,331 (+)	NCBI		Celera
Cytogenetic Map	15	q25	NCBI

Ubac2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955404	11,205,585 - 11,357,370 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955404	11,205,972 - 11,357,370 (-)	NCBI	ChiLan1.0	ChiLan1.0

UBAC2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	100,724,904 - 100,910,805 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	99,392,120 - 99,577,707 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	80,370,475 - 80,554,055 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	99,509,508 - 99,692,537 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	99,509,508 - 99,692,537 (+)	Ensembl	panpan1.1		panPan2

Ubac2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	184,674,992 - 184,833,929 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	11,118,218 - 11,277,301 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936472	11,118,227 - 11,278,636 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UBAC2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	68,145,101 - 68,319,939 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	11	68,144,835 - 68,319,771 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	75,379,506 - 75,620,322 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

UBAC2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	77,859,634 - 78,045,245 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	77,860,066 - 78,045,311 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666046	34,355,405 - 34,539,889 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ubac2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624793	11,657,526 - 11,824,570 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624793	11,658,268 - 11,824,632 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in UBAC2
1952 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014106385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022408120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038431362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038431363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038456613	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038506749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038506750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038569945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038569946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038634105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038634106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000060	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000009338 ⟹ ENSCAFP00000008667

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	22	49,246,258 - 49,424,552 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000071397 ⟹ ENSCAFP00000062387

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	22	49,245,930 - 49,424,189 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000075215 ⟹ ENSCAFP00000065772

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	22	49,246,258 - 49,425,088 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000078547 ⟹ ENSCAFP00000048699

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	22	49,246,258 - 49,424,552 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845038576 ⟹ ENSCAFP00845030198

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	22	49,687,909 - 49,867,388 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845038629 ⟹ ENSCAFP00845030244

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	22	49,687,962 - 49,867,382 (+)	Ensembl

RefSeq Acc Id:

XM_014106385 ⟹ XP_013961860

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	22	49,246,210 - 49,425,611 (+)	NCBI
Dog10K_Boxer_Tasha	22	49,027,436 - 49,206,830 (+)	NCBI

Sequence:

show sequence

GCCCCAGGAGTGGAATCCAGTTGCCGGATTCGCCGCTGCGCCGGGAGTGCGCCTGCGCGGTCTC
CGGGTCCCTCCACCTCCGCTTCCCCTCCCCCTGTCCCCCCTCGGGGGCTCCGGGTCCGGCGGGA
CCATGTTCGCCAGCACCGGCTCCAGCGGGCTTTATAAGGCACCTCTGTCTAAGAGTCTTCTGCT
GGTCCCCAGTGCCCTGTCCCTTTTGCTGGCCCTTCTCCTGCCACACTGTCAGAGGTTCTTTGTG
TATGACCTCCAAGCAGTCAAGGAAGACCTCCAGATTTGGAGGTTGATATGTGGAAGAATAATTT
GCCTTGATTTGAAAGATACTTTCTGCAGTAGTCTGCTTATTTATAATTTTAGGATATTTGAAAG
AAGATATGGAAGCAGAAAATTTGCATCCTTTTTGCTGGGTTCCTGGGTTTTGTCGGCCTTGGTT
GACCTCATCCTCGTTGAGGCTATGTGGTATTTCTTTGGTATTGCTACAGCCGGGAATTTGCCTT
CTGGATTCCTGGCACCTGTGTTTGCTCTGTTTGTACCATTTTACTGCTCCATACCAAGAATCCA
AGTGGCACAAATTCTGGGCCCGTTGTCCATCACAAACAAGACATTGATTTATATATTGGGACTA
CAGCTTTTCACCTCTGGTTCCTACATCTGGATTGTAGCCATAAGTGGACTTATATCAGGCATCT
GCTACAACAGCAAAGTGTTCCAACTCCAGCAGGTGCTCTGCATTCCCAGATGGATGGCAAAGTT
CTTTTCTTGGACACTTGAGCCTATCTTCTCATCTCCAGAACCCACCACTGAAGCCAGAATCGGG
ATGGGAGCCACAGTAGACATCCAGAGACAGCAAAGGATGGAGCTGCTTGACCGGCAGCTGATGC
TTTCTCAGTTTGCACAAGTGAGAAGGCAGAGACAGCAGGGAGGAATGATCAATTGGAATCGTCT
TTTCCCTCCTTTACGTCAGCGACGAAATATAAACTATCAGGATGGTCGGCAGTCTGAACAACAA
GCATCTCCTCCTCTGGAGGTTTCTGAGGAACAGGTTGCTCGGCTCATGGAGATGGGATTTTCTA
GGGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTGAATGTGGCTACCAACTTCCT
GCTGCAGCACTGAGAGTCCTGAGTGGTGGATAGAGACTGGCCAAGCTGCTACCCCCCCACCCCC
ACCCCTCAAGCGGGTGAGGTCCTGACCCTGAGGCAGCCTGGGGCCAGCACTGTCCTGGGCATGC
GTCTTCCTGTGCTCTCATGGGCAAACGGTGGTTCCCACCGCTCCTCCCTTCATTCCAAGGCCAT
TGCCGTTAAAAAAAAGTCTCGAAAATAAGTTTGCCATTAAATCAGCATGTATTTTTCTATCTGC
ATTTTTTTTAATGGGGCATTTTCCTTCATTTGGTGAATCATCACTCATTCCTAATGTGTTTAAA
ATCCATTAAAACTGCAAATTTCTGTAAGCAATGGAATAGCACCCACAATGGGAAATTATTGCTA
ACGTAATCTTCTTTCCACTGTAATGTGTCAGCCTACATTATATCCGATCATAAATCCCATGACA
GGGGAATGTTATTCAGGAAGAACATGGCAAAATATTCCTTATGGACTATTTCTTATCACTATTT
TTTCCCTCACATTTGCTTTCAAACCCCAGTGGCTGCTGGGTGTCACCTTTTCTAGGGAGTGAAC
AGCACAGATCTGCTGCCCTCGGTCTTAGCCAGGCCTGAGCGAAGAAGGAGAAACAGAGAAGCAG
ATTCTACTCCCCACAGTTCCTGCCCATTTCATCCAGGGAGTATCTCTAACTCCTGCTCTTCCTC
ACTTCCATTAAAGAAAATAGTAAGTTCTGATTCAAGGTTCTGGAATACTCTGTGAAACTTAACT
GAGGTTCCTTTTGCTCAGAATATGTGCGGTTATCCTCTCAGGCTGGGGGTGAAAACAGGACAGA
GCAGGGGCTCCCTGGAGCAGTGTGGGGCCCAGCCGCTCTGGAGGCAGGAGCTCCCCAGCCCCGT
GTGACCTGATGTCTGTGCCAGGCGGGGTGGACTGCCTGCAGAGGACACCGCCACAGGGAGGAGG
GAGGCAGAGGGAGGCAGGGGTGGGCCTGGTGAGGGCCAGGGGATGGAAGCAGGGCAACTGTTAA
GATCAAAGGCAATGATGTGACTCCTGTGTTCTGCAAAAGGAGCGGCAATGTATCAAATTGATGC
AAATTTGGACAAGTGTAATACTTATAATAAAGTTTTTAATGTGTTTTA

hide sequence

RefSeq Acc Id:

XM_038431362 ⟹ XP_038287290

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	22	49,687,865 - 49,867,389 (+)	NCBI

RefSeq Acc Id:

XM_038431363 ⟹ XP_038287291

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	22	49,687,669 - 49,867,389 (+)	NCBI

RefSeq Acc Id:

XM_038456613 ⟹ XP_038312541

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	22	49,027,631 - 49,206,830 (+)	NCBI

RefSeq Acc Id:

XM_038506749 ⟹ XP_038362677

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	22	49,339,036 - 49,518,273 (+)	NCBI

RefSeq Acc Id:

XM_038506750 ⟹ XP_038362678

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	22	49,338,912 - 49,518,273 (+)	NCBI

RefSeq Acc Id:

XM_038569945 ⟹ XP_038425873

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	22	49,409,650 - 49,589,145 (+)	NCBI

RefSeq Acc Id:

XM_038569946 ⟹ XP_038425874

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	22	49,409,455 - 49,589,145 (+)	NCBI

RefSeq Acc Id:

XM_038634105 ⟹ XP_038490033

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	22	49,373,430 - 49,552,802 (+)	NCBI

RefSeq Acc Id:

XM_038634106 ⟹ XP_038490034

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	22	49,373,235 - 49,552,802 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_013961860	(Get FASTA)	NCBI Sequence Viewer
	XP_038287290	(Get FASTA)	NCBI Sequence Viewer
	XP_038287291	(Get FASTA)	NCBI Sequence Viewer
	XP_038312541	(Get FASTA)	NCBI Sequence Viewer
	XP_038362677	(Get FASTA)	NCBI Sequence Viewer
	XP_038362678	(Get FASTA)	NCBI Sequence Viewer
	XP_038425873	(Get FASTA)	NCBI Sequence Viewer
	XP_038425874	(Get FASTA)	NCBI Sequence Viewer
	XP_038490033	(Get FASTA)	NCBI Sequence Viewer
	XP_038490034	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000008667.5
	ENSCAFP00000048699.2
	ENSCAFP00000062387.2
	ENSCAFP00000065772.2
	ENSCAFP00000074942.1
	ENSCAFP00030010590.1
	ENSCAFP00040038295.1
	ENSCAFP00040038306.1
	ENSCAFP00040038329.1
	ENSCAFP00040038356.1
	ENSCAFP00845030198
	ENSCAFP00845030198.1
	ENSCAFP00845030244.1

RefSeq Acc Id:	XP_013961860 ⟸ XM_014106385
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LF79 (UniProtKB/TrEMBL), A0A8I3P9G5 (UniProtKB/TrEMBL), A0A8C0MEP7 (UniProtKB/TrEMBL), A0A8P0PEG6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFASTGSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQRFFVYDLQAVKEDLQIWRLICGRIIC LDLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALVDLILVEAMWYFFGIATAGNLPS GFLAPVFALFVPFYCSIPRIQVAQILGPLSITNKTLIYILGLQLFTSGSYIWIVAISGLISGIC YNSKVFQLQQVLCIPRWMAKFFSWTLEPIFSSPEPTTEARIGMGATVDIQRQQRMELLDRQLML SQFAQVRRQRQQGGMINWNRLFPPLRQRRNINYQDGRQSEQQASPPLEVSEEQVARLMEMGFSR GDALEALRASNNDLNVATNFLLQH hide sequence

Ensembl Acc Id:

ENSCAFP00000048699 ⟸ ENSCAFT00000078547

Ensembl Acc Id:

ENSCAFP00000008667 ⟸ ENSCAFT00000009338

Ensembl Acc Id:

ENSCAFP00000065772 ⟸ ENSCAFT00000075215

Ensembl Acc Id:

ENSCAFP00000062387 ⟸ ENSCAFT00000071397

RefSeq Acc Id:	XP_038362678 ⟸ XM_038506750
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038362677 ⟸ XM_038506749
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038490034 ⟸ XM_038634106
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038490033 ⟸ XM_038634105
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038287291 ⟸ XM_038431363
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LF79 (UniProtKB/TrEMBL), A0A8I3P9G5 (UniProtKB/TrEMBL), A0A8C0MEP7 (UniProtKB/TrEMBL), A0A8P0PEG6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038287290 ⟸ XM_038431362
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0TJU7 (UniProtKB/TrEMBL), A0A8C0TMD7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038312541 ⟸ XM_038456613
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0TJU7 (UniProtKB/TrEMBL), A0A8C0TMD7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038425874 ⟸ XM_038569946
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LF79 (UniProtKB/TrEMBL), A0A8C0MEP7 (UniProtKB/TrEMBL), A0A8I3P9G5 (UniProtKB/TrEMBL), A0A8P0PEG6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038425873 ⟸ XM_038569945
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0TJU7 (UniProtKB/TrEMBL), A0A8C0TMD7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845030244 ⟸ ENSCAFT00845038629

Ensembl Acc Id:

ENSCAFP00845030198 ⟸ ENSCAFT00845038576

Protein Domains

UBA

Promoters

RGD ID:

13687346

Promoter ID:

EPDNEW_C5413

Type:

initiation region

Name:

UBAC2_1

Description:

UBA domain containing 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	22	49,246,306 - 49,246,366	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000005799	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030006559	UniProtKB/TrEMBL
	ENSCAFG00040023571	UniProtKB/TrEMBL
	ENSCAFG00845021863	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000009338.5	UniProtKB/TrEMBL
	ENSCAFT00000071397.2	UniProtKB/TrEMBL
	ENSCAFT00000075215.2	UniProtKB/TrEMBL
	ENSCAFT00000078547.2	UniProtKB/TrEMBL
	ENSCAFT00000108889.1	UniProtKB/TrEMBL
	ENSCAFT00030012101.1	UniProtKB/TrEMBL
	ENSCAFT00040043877.1	UniProtKB/TrEMBL
	ENSCAFT00040043892.1	UniProtKB/TrEMBL
	ENSCAFT00040043915.1	UniProtKB/TrEMBL
	ENSCAFT00040043944.1	UniProtKB/TrEMBL
	ENSCAFT00845038576	ENTREZGENE
	ENSCAFT00845038576.1	UniProtKB/TrEMBL
	ENSCAFT00845038629.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1540.10	UniProtKB/TrEMBL
	DNA helicase RuvA subunit, C-terminal domain	UniProtKB/TrEMBL
InterPro	Rhomboid-like_sf	UniProtKB/TrEMBL
	UBA	UniProtKB/TrEMBL
	UBA-like_sf	UniProtKB/TrEMBL
	UBA_UBAC2	UniProtKB/TrEMBL
KEGG Report	cfa:608309	UniProtKB/TrEMBL
NCBI Gene	UBAC2	ENTREZGENE
PANTHER	RHOMBOID-RELATED PROTEIN	UniProtKB/TrEMBL
	UBA DOMAIN-CONTAINING 2	UniProtKB/TrEMBL
Pfam	UBA	UniProtKB/TrEMBL
PROSITE	UBA	UniProtKB/TrEMBL
SMART	UBA	UniProtKB/TrEMBL
Superfamily-SCOP	SSF144091	UniProtKB/TrEMBL
	SSF46934	UniProtKB/TrEMBL
UniProt	A0A8C0LF79	ENTREZGENE
	A0A8C0MEP7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TJU7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TMD7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TNY8_CANLF	UniProtKB/TrEMBL
	A0A8C0TQQ0_CANLF	UniProtKB/TrEMBL
	A0A8I3P9G5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3S2R7_CANLF	UniProtKB/TrEMBL
	A0A8P0NYP4_CANLF	UniProtKB/TrEMBL
	A0A8P0PB90_CANLF	UniProtKB/TrEMBL
	A0A8P0PEG6	ENTREZGENE
	A0A8P0SB90_CANLF	UniProtKB/TrEMBL
	A0A8P0TUG9_CANLF	UniProtKB/TrEMBL
UniProt Secondary	A0A8P0PEG6	UniProtKB/TrEMBL
VGNC ID	VGNC:48043	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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