EXOC1 (exocyst complex component 1) - Rat Genome Database

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Gene: EXOC1 (exocyst complex component 1) Canis lupus familiaris
Analyze
Symbol: EXOC1
Name: exocyst complex component 1
RGD ID: 12217117
Description: INVOLVED IN embryo implantation (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH congenital disorder of glycosylation type IIk (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (inferred); exocyst (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC475149
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11348,109,773 - 48,177,070 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1348,109,810 - 48,176,177 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1348,001,315 - 48,068,611 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01348,723,688 - 48,790,993 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1348,723,718 - 48,790,993 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11348,397,897 - 48,465,133 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01347,925,412 - 47,992,453 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01348,872,399 - 48,937,323 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
exocyst  (IEA)
plasma membrane  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:19889837   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
EXOC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11348,109,773 - 48,177,070 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1348,109,810 - 48,176,177 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1348,001,315 - 48,068,611 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01348,723,688 - 48,790,993 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1348,723,718 - 48,790,993 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11348,397,897 - 48,465,133 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01347,925,412 - 47,992,453 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01348,872,399 - 48,937,323 (+)NCBIUU_Cfam_GSD_1.0
EXOC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38455,853,648 - 55,905,086 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl455,853,648 - 55,905,086 (+)EnsemblGRCh38hg38GRCh38
GRCh37456,719,814 - 56,771,252 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36456,414,573 - 56,466,001 (+)NCBINCBI36Build 36hg18NCBI36
Celera454,226,215 - 54,277,630 (+)NCBICelera
Cytogenetic Map4q12NCBI
HuRef452,673,696 - 52,725,109 (+)NCBIHuRef
CHM1_1456,754,973 - 56,806,432 (+)NCBICHM1_1
T2T-CHM13v2.0459,341,793 - 59,393,237 (+)NCBIT2T-CHM13v2.0
Exoc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39576,677,147 - 76,718,134 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl576,677,158 - 76,718,141 (+)EnsemblGRCm39 Ensembl
GRCm38576,529,307 - 76,570,298 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl576,529,311 - 76,570,294 (+)EnsemblGRCm38mm10GRCm38
MGSCv37576,958,348 - 76,999,310 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36577,604,086 - 77,645,073 (+)NCBIMGSCv36mm8
MGSCv36576,046,327 - 76,087,316 (+)NCBIMGSCv36mm8
Celera573,797,301 - 73,843,735 (+)NCBICelera
Cytogenetic Map5C3.3NCBI
cM Map541.28NCBI
Exoc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81431,965,782 - 32,014,156 (-)NCBIGRCr8
mRatBN7.21431,611,536 - 31,659,920 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1431,611,547 - 31,659,914 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1431,987,967 - 32,036,989 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01433,295,857 - 33,344,876 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01431,780,978 - 31,829,997 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01434,132,210 - 34,192,296 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1434,132,221 - 34,177,515 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01433,923,763 - 33,958,422 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41433,895,938 - 33,933,231 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11433,895,939 - 33,933,231 (-)NCBI
Celera1430,939,904 - 30,973,166 (-)NCBICelera
Cytogenetic Map14p11NCBI
Exoc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544715,048,959 - 15,100,660 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544715,049,087 - 15,100,628 (-)NCBIChiLan1.0ChiLan1.0
EXOC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2373,880,401 - 73,932,058 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1474,085,893 - 74,137,485 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0468,024,177 - 68,075,565 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1474,591,574 - 74,642,955 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl474,591,574 - 74,642,955 (-)Ensemblpanpan1.1panPan2
Exoc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528528,098,753 - 28,149,568 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648218,148,674 - 18,199,490 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648218,148,672 - 18,199,481 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EXOC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl855,189,360 - 55,246,251 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1855,189,366 - 55,246,256 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2858,314,884 - 58,371,752 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EXOC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1712,705,657 - 12,757,996 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl712,705,305 - 12,757,989 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606613,377,449 - 13,429,831 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Exoc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476113,494,483 - 13,556,289 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476113,496,443 - 13,556,233 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in EXOC1
818 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005628207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005628208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005628209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005628210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005628211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005628212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038556154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038620086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_532380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000003431   ⟹   ENSCAFP00000003183
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1348,109,810 - 48,176,177 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000047094   ⟹   ENSCAFP00000039491
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1348,109,810 - 48,176,177 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000049300   ⟹   ENSCAFP00000039018
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1348,109,810 - 48,176,177 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000066783   ⟹   ENSCAFP00000055053
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1348,109,810 - 48,176,177 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000072944   ⟹   ENSCAFP00000051070
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1348,109,810 - 48,176,177 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845022749   ⟹   ENSCAFP00845017838
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1348,723,718 - 48,790,990 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845022832   ⟹   ENSCAFP00845017897
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1348,723,718 - 48,790,990 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845023025   ⟹   ENSCAFP00845018051
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1348,723,718 - 48,790,990 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845023082   ⟹   ENSCAFP00845018096
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1348,723,718 - 48,790,990 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845023158   ⟹   ENSCAFP00845018158
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1348,723,718 - 48,790,990 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845023214   ⟹   ENSCAFP00845018206
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1348,723,730 - 48,790,993 (+)Ensembl
RefSeq Acc Id: XM_005628207   ⟹   XP_005628264
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11348,109,773 - 48,177,070 (+)NCBI
Dog10K_Boxer_Tasha1348,001,315 - 48,068,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005628208   ⟹   XP_005628265
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11348,109,773 - 48,177,070 (+)NCBI
Dog10K_Boxer_Tasha1348,001,315 - 48,068,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005628209   ⟹   XP_005628266
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11348,109,773 - 48,177,070 (+)NCBI
Dog10K_Boxer_Tasha1348,001,315 - 48,068,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005628210   ⟹   XP_005628267
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11348,109,773 - 48,177,070 (+)NCBI
Dog10K_Boxer_Tasha1348,001,315 - 48,068,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005628211   ⟹   XP_005628268
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11348,109,773 - 48,177,070 (+)NCBI
Dog10K_Boxer_Tasha1348,001,315 - 48,068,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005628212   ⟹   XP_005628269
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11348,109,773 - 48,177,070 (+)NCBI
Dog10K_Boxer_Tasha1348,001,315 - 48,068,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038493827   ⟹   XP_038349755
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11348,397,897 - 48,465,133 (+)NCBI
RefSeq Acc Id: XM_038493828   ⟹   XP_038349756
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11348,397,897 - 48,465,133 (+)NCBI
RefSeq Acc Id: XM_038493829   ⟹   XP_038349757
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11348,397,897 - 48,465,133 (+)NCBI
RefSeq Acc Id: XM_038493830   ⟹   XP_038349758
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11348,397,897 - 48,465,133 (+)NCBI
RefSeq Acc Id: XM_038493831   ⟹   XP_038349759
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11348,397,897 - 48,465,133 (+)NCBI
RefSeq Acc Id: XM_038493832   ⟹   XP_038349760
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11348,397,897 - 48,465,133 (+)NCBI
RefSeq Acc Id: XM_038493833   ⟹   XP_038349761
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11348,397,897 - 48,465,133 (+)NCBI
RefSeq Acc Id: XM_038556148   ⟹   XP_038412076
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01348,872,399 - 48,937,323 (+)NCBI
RefSeq Acc Id: XM_038556149   ⟹   XP_038412077
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01348,872,399 - 48,937,323 (+)NCBI
RefSeq Acc Id: XM_038556150   ⟹   XP_038412078
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01348,872,399 - 48,937,323 (+)NCBI
RefSeq Acc Id: XM_038556151   ⟹   XP_038412079
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01348,872,399 - 48,937,323 (+)NCBI
RefSeq Acc Id: XM_038556152   ⟹   XP_038412080
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01348,872,399 - 48,937,323 (+)NCBI
RefSeq Acc Id: XM_038556153   ⟹   XP_038412081
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01348,872,399 - 48,937,323 (+)NCBI
RefSeq Acc Id: XM_038556154   ⟹   XP_038412082
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01348,872,399 - 48,937,320 (+)NCBI
RefSeq Acc Id: XM_038620080   ⟹   XP_038476008
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01347,925,412 - 47,992,453 (+)NCBI
RefSeq Acc Id: XM_038620081   ⟹   XP_038476009
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01347,925,412 - 47,992,453 (+)NCBI
RefSeq Acc Id: XM_038620082   ⟹   XP_038476010
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01347,925,412 - 47,992,453 (+)NCBI
RefSeq Acc Id: XM_038620083   ⟹   XP_038476011
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01347,925,412 - 47,992,453 (+)NCBI
RefSeq Acc Id: XM_038620084   ⟹   XP_038476012
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01347,925,412 - 47,992,453 (+)NCBI
RefSeq Acc Id: XM_038620085   ⟹   XP_038476013
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01347,925,412 - 47,992,453 (+)NCBI
RefSeq Acc Id: XM_038620086   ⟹   XP_038476014
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01347,925,412 - 47,992,453 (+)NCBI
RefSeq Acc Id: XM_038685686   ⟹   XP_038541614
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01348,723,688 - 48,790,993 (+)NCBI
RefSeq Acc Id: XM_038685687   ⟹   XP_038541615
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01348,723,688 - 48,790,993 (+)NCBI
RefSeq Acc Id: XM_038685688   ⟹   XP_038541616
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01348,723,688 - 48,790,993 (+)NCBI
RefSeq Acc Id: XM_038685690   ⟹   XP_038541618
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01348,723,688 - 48,790,993 (+)NCBI
RefSeq Acc Id: XM_038685691   ⟹   XP_038541619
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01348,723,688 - 48,790,993 (+)NCBI
RefSeq Acc Id: XM_038685692   ⟹   XP_038541620
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01348,723,688 - 48,790,993 (+)NCBI
RefSeq Acc Id: XM_038685693   ⟹   XP_038541621
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01348,723,688 - 48,790,993 (+)NCBI
RefSeq Acc Id: XM_532380   ⟹   XP_532380
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11348,109,773 - 48,177,070 (+)NCBI
Dog10K_Boxer_Tasha1348,001,315 - 48,068,611 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005628264 (Get FASTA)   NCBI Sequence Viewer  
  XP_005628265 (Get FASTA)   NCBI Sequence Viewer  
  XP_005628266 (Get FASTA)   NCBI Sequence Viewer  
  XP_005628267 (Get FASTA)   NCBI Sequence Viewer  
  XP_005628268 (Get FASTA)   NCBI Sequence Viewer  
  XP_005628269 (Get FASTA)   NCBI Sequence Viewer  
  XP_038349755 (Get FASTA)   NCBI Sequence Viewer  
  XP_038349756 (Get FASTA)   NCBI Sequence Viewer  
  XP_038349757 (Get FASTA)   NCBI Sequence Viewer  
  XP_038349758 (Get FASTA)   NCBI Sequence Viewer  
  XP_038349759 (Get FASTA)   NCBI Sequence Viewer  
  XP_038349760 (Get FASTA)   NCBI Sequence Viewer  
  XP_038349761 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412076 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412077 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412078 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412079 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412080 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412081 (Get FASTA)   NCBI Sequence Viewer  
  XP_038412082 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476008 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476009 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476010 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476011 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476012 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476013 (Get FASTA)   NCBI Sequence Viewer  
  XP_038476014 (Get FASTA)   NCBI Sequence Viewer  
  XP_038541614 (Get FASTA)   NCBI Sequence Viewer  
  XP_038541615 (Get FASTA)   NCBI Sequence Viewer  
  XP_038541616 (Get FASTA)   NCBI Sequence Viewer  
  XP_038541618 (Get FASTA)   NCBI Sequence Viewer  
  XP_038541619 (Get FASTA)   NCBI Sequence Viewer  
  XP_038541620 (Get FASTA)   NCBI Sequence Viewer  
  XP_038541621 (Get FASTA)   NCBI Sequence Viewer  
  XP_532380 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000003183.5
  ENSCAFP00000039018.2
  ENSCAFP00000039491.2
  ENSCAFP00000051070.1
  ENSCAFP00030031939.1
  ENSCAFP00030032058.1
  ENSCAFP00030032228.1
  ENSCAFP00030032354.1
  ENSCAFP00030032506.1
  ENSCAFP00040026585.1
  ENSCAFP00040026667.1
  ENSCAFP00040026792.1
  ENSCAFP00040026937.1
  ENSCAFP00040027061.1
  ENSCAFP00845017838
  ENSCAFP00845017838.1
  ENSCAFP00845017897
  ENSCAFP00845017897.1
  ENSCAFP00845018051
  ENSCAFP00845018051.1
  ENSCAFP00845018096
  ENSCAFP00845018096.1
  ENSCAFP00845018158.1
  ENSCAFP00845018206
  ENSCAFP00845018206.1
RefSeq Acc Id: XP_005628264   ⟸   XM_005628207
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SWE1 (UniProtKB/TrEMBL),   A0A8I3NMX3 (UniProtKB/TrEMBL),   A0A8C0LSY3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005628266   ⟸   XM_005628209
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SV64 (UniProtKB/TrEMBL),   A0A8I3NE87 (UniProtKB/TrEMBL),   A0A8C0Z021 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005628265   ⟸   XM_005628208
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NWK2 (UniProtKB/TrEMBL),   A0A8I3NYD8 (UniProtKB/TrEMBL),   A0A8C0Z021 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005628267   ⟸   XM_005628210
- Peptide Label: isoform X4
- UniProtKB: A0A8C0RPG7 (UniProtKB/TrEMBL),   A0A8I3NMX9 (UniProtKB/TrEMBL),   A0A8C0SW57 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005628268   ⟸   XM_005628211
- Peptide Label: isoform X6
- UniProtKB: A0A8I3NIM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_532380   ⟸   XM_532380
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SW57 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005628269   ⟸   XM_005628212
- Peptide Label: isoform X7
- UniProtKB: A0A8I3NIM0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000039018   ⟸   ENSCAFT00000049300
Ensembl Acc Id: ENSCAFP00000003183   ⟸   ENSCAFT00000003431
Ensembl Acc Id: ENSCAFP00000055053   ⟸   ENSCAFT00000066783
Ensembl Acc Id: ENSCAFP00000039491   ⟸   ENSCAFT00000047094
Ensembl Acc Id: ENSCAFP00000051070   ⟸   ENSCAFT00000072944
RefSeq Acc Id: XP_038349755   ⟸   XM_038493827
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038349757   ⟸   XM_038493829
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038349758   ⟸   XM_038493830
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038349760   ⟸   XM_038493832
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038349756   ⟸   XM_038493828
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038349759   ⟸   XM_038493831
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038349761   ⟸   XM_038493833
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038476008   ⟸   XM_038620080
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038476010   ⟸   XM_038620082
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038476011   ⟸   XM_038620083
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038476013   ⟸   XM_038620085
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038476009   ⟸   XM_038620081
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038476012   ⟸   XM_038620084
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038476014   ⟸   XM_038620086
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038541614   ⟸   XM_038685686
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SWE1 (UniProtKB/TrEMBL),   A0A8I3NMX3 (UniProtKB/TrEMBL),   A0A8C0LSY3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038541616   ⟸   XM_038685688
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SV64 (UniProtKB/TrEMBL),   A0A8I3NE87 (UniProtKB/TrEMBL),   A0A8C0Z021 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038541618   ⟸   XM_038685690
- Peptide Label: isoform X4
- UniProtKB: A0A8C0RPG7 (UniProtKB/TrEMBL),   A0A8I3NMX9 (UniProtKB/TrEMBL),   A0A8C0SW57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038541620   ⟸   XM_038685692
- Peptide Label: isoform X6
- UniProtKB: A0A8I3NIM0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038541615   ⟸   XM_038685687
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NWK2 (UniProtKB/TrEMBL),   A0A8I3NYD8 (UniProtKB/TrEMBL),   A0A8C0Z021 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038541619   ⟸   XM_038685691
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SW57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038541621   ⟸   XM_038685693
- Peptide Label: isoform X7
- UniProtKB: A0A8I3NIM0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412076   ⟸   XM_038556148
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LSY3 (UniProtKB/TrEMBL),   A0A8C0SWE1 (UniProtKB/TrEMBL),   A0A8I3NMX3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412078   ⟸   XM_038556150
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SV64 (UniProtKB/TrEMBL),   A0A8C0Z021 (UniProtKB/TrEMBL),   A0A8I3NE87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412079   ⟸   XM_038556151
- Peptide Label: isoform X4
- UniProtKB: A0A8C0RPG7 (UniProtKB/TrEMBL),   A0A8C0SW57 (UniProtKB/TrEMBL),   A0A8I3NMX9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412081   ⟸   XM_038556153
- Peptide Label: isoform X6
- UniProtKB: A0A8I3NIM0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412077   ⟸   XM_038556149
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NWK2 (UniProtKB/TrEMBL),   A0A8C0Z021 (UniProtKB/TrEMBL),   A0A8I3NYD8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412080   ⟸   XM_038556152
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SW57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038412082   ⟸   XM_038556154
- Peptide Label: isoform X7
- UniProtKB: A0A8I3NIM0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845017897   ⟸   ENSCAFT00845022832
Ensembl Acc Id: ENSCAFP00845017838   ⟸   ENSCAFT00845022749
Ensembl Acc Id: ENSCAFP00845018096   ⟸   ENSCAFT00845023082
Ensembl Acc Id: ENSCAFP00845018158   ⟸   ENSCAFT00845023158
Ensembl Acc Id: ENSCAFP00845018051   ⟸   ENSCAFT00845023025
Ensembl Acc Id: ENSCAFP00845018206   ⟸   ENSCAFT00845023214
Protein Domains
Exocyst complex component Sec3 PIP2-binding N-

Promoters
RGD ID:13685656
Promoter ID:EPDNEW_C3725
Type:initiation region
Name:EXOC1_1
Description:exocyst complex component 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11348,109,805 - 48,109,865EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000002175 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030019927 UniProtKB/TrEMBL
  ENSCAFG00040016571 UniProtKB/TrEMBL
  ENSCAFG00845012783 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000003431.5 UniProtKB/TrEMBL
  ENSCAFT00000047094.4 UniProtKB/TrEMBL
  ENSCAFT00000049300.4 UniProtKB/TrEMBL
  ENSCAFT00000072944.2 UniProtKB/TrEMBL
  ENSCAFT00030036607.1 UniProtKB/TrEMBL
  ENSCAFT00030036749.1 UniProtKB/TrEMBL
  ENSCAFT00030036944.1 UniProtKB/TrEMBL
  ENSCAFT00030037091.1 UniProtKB/TrEMBL
  ENSCAFT00030037263.1 UniProtKB/TrEMBL
  ENSCAFT00040030588.1 UniProtKB/TrEMBL
  ENSCAFT00040030680.1 UniProtKB/TrEMBL
  ENSCAFT00040030823.1 UniProtKB/TrEMBL
  ENSCAFT00040030988.1 UniProtKB/TrEMBL
  ENSCAFT00040031128.1 UniProtKB/TrEMBL
  ENSCAFT00845022749 ENTREZGENE
  ENSCAFT00845022749.1 UniProtKB/TrEMBL
  ENSCAFT00845022832 ENTREZGENE
  ENSCAFT00845022832.1 UniProtKB/TrEMBL
  ENSCAFT00845023025 ENTREZGENE
  ENSCAFT00845023025.1 UniProtKB/TrEMBL
  ENSCAFT00845023082 ENTREZGENE
  ENSCAFT00845023082.1 UniProtKB/TrEMBL
  ENSCAFT00845023158.1 UniProtKB/TrEMBL
  ENSCAFT00845023214 ENTREZGENE
  ENSCAFT00845023214.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.90 UniProtKB/TrEMBL
InterPro Sec3-PIP2_bind UniProtKB/TrEMBL
  Sec3_C UniProtKB/TrEMBL
  Sec3_C UniProtKB/TrEMBL
KEGG Report cfa:475149 UniProtKB/TrEMBL
NCBI Gene LOC475149 ENTREZGENE
PANTHER EXOCYST COMPLEX COMPONENT 1 UniProtKB/TrEMBL
  SEC3/SYNTAXIN-RELATED UniProtKB/TrEMBL
Pfam Sec3-PIP2_bind UniProtKB/TrEMBL
  Sec3_C UniProtKB/TrEMBL
  Sec3_C-term UniProtKB/TrEMBL
SMART Sec3-PIP2_bind UniProtKB/TrEMBL
UniProt A0A8C0LSY3 ENTREZGENE
  A0A8C0NWK2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RPG7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SV64 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SVJ3_CANLF UniProtKB/TrEMBL
  A0A8C0SW57 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SWE1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Z021 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NE87 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NII2_CANLF UniProtKB/TrEMBL
  A0A8I3NIM0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NMX3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NMX9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NYD8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:51770 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-02-27 EXOC1  exocyst complex component 1  LOC475149    Symbol and/or name change 5135510 APPROVED